Metagenome Family F097887

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097887
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	58 residues
Representative Sequence	MKIFDNGGKQIGRIDQSFSKDKSVTVHEIRNITTITVRDRNTGKVTTETLIGQSPFGTSE
Number of Associated Samples	86
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.69 %
% of genes near scaffold ends (potentially truncated)	20.19 %
% of genes from short scaffolds (< 2000 bps)	70.19 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.577 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (25.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 39.77% Coil/Unstructured: 60.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00239	Resolvase	10.58
PF13384	HTH_23	2.88
PF11074	DUF2779	2.88
PF00873	ACR_tran	1.92
PF14559	TPR_19	1.92
PF00589	Phage_integrase	1.92
PF13730	HTH_36	0.96
PF01555	N6_N4_Mtase	0.96
PF04851	ResIII	0.96
PF00383	dCMP_cyt_deam_1	0.96
PF00805	Pentapeptide	0.96
PF02586	SRAP	0.96
PF12804	NTP_transf_3	0.96
PF08448	PAS_4	0.96
PF08681	DUF1778	0.96
PF02796	HTH_7	0.96
PF13181	TPR_8	0.96
PF00069	Pkinase	0.96
PF04014	MazE_antitoxin	0.96
PF09250	Prim-Pol	0.96
PF01527	HTH_Tnp_1	0.96
PF00476	DNA_pol_A	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	10.58
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	10.58
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.85
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.96
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.96
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.96
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.96
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.96
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.96
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.58 %
Unclassified	root	N/A	37.50 %
Viruses	superkingdom	All Organisms → Viruses	1.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.58 %
Unclassified	root	N/A	37.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	49.04 %
Unclassified	root	N/A	37.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.92 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.92 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.92 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.96 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.92 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.96 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.96 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.92 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.96 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.96 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10174603	Not Available	1135	Open in IMG/M
3300005436\|Ga0070713_100987824	Not Available	812	Open in IMG/M
3300005538\|Ga0070731_10745036	Not Available	651	Open in IMG/M
3300005602\|Ga0070762_10736333	Not Available	664	Open in IMG/M
3300005712\|Ga0070764_10279929	Not Available	957	Open in IMG/M
3300005921\|Ga0070766_10878180	Not Available	613	Open in IMG/M
3300006052\|Ga0075029_100043901	All Organisms → cellular organisms → Bacteria → Acidobacteria	2573	Open in IMG/M
3300006052\|Ga0075029_100052607	All Organisms → cellular organisms → Bacteria	2362	Open in IMG/M
3300006059\|Ga0075017_100885146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300006173\|Ga0070716_101078973	Not Available	639	Open in IMG/M
3300006174\|Ga0075014_100183721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1044	Open in IMG/M
3300006358\|Ga0068871_100803114	Not Available	867	Open in IMG/M
3300009700\|Ga0116217_10221320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1237	Open in IMG/M
3300009839\|Ga0116223_10707160	Not Available	578	Open in IMG/M
3300010339\|Ga0074046_10002008	All Organisms → cellular organisms → Bacteria	17856	Open in IMG/M
3300010341\|Ga0074045_10192397	All Organisms → cellular organisms → Bacteria → Acidobacteria	1370	Open in IMG/M
3300010358\|Ga0126370_11163324	Not Available	715	Open in IMG/M
3300010361\|Ga0126378_10610794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1204	Open in IMG/M
3300010379\|Ga0136449_100161669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4360	Open in IMG/M
3300010379\|Ga0136449_101163874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1219	Open in IMG/M
3300010379\|Ga0136449_103047457	Not Available	652	Open in IMG/M
3300012971\|Ga0126369_11275001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300014164\|Ga0181532_10000382	All Organisms → cellular organisms → Bacteria → Acidobacteria	45917	Open in IMG/M
3300014164\|Ga0181532_10024476	All Organisms → cellular organisms → Bacteria → Acidobacteria	4305	Open in IMG/M
3300014501\|Ga0182024_10387116	Not Available	1813	Open in IMG/M
3300014501\|Ga0182024_10435112	All Organisms → Viruses → Predicted Viral	1686	Open in IMG/M
3300014657\|Ga0181522_10891773	Not Available	548	Open in IMG/M
3300014838\|Ga0182030_10758429	Not Available	896	Open in IMG/M
3300015374\|Ga0132255_106238298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300017822\|Ga0187802_10467203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300017823\|Ga0187818_10154039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300017927\|Ga0187824_10012633	Not Available	2439	Open in IMG/M
3300017930\|Ga0187825_10027336	Not Available	1920	Open in IMG/M
3300017942\|Ga0187808_10312479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300017946\|Ga0187879_10698904	Not Available	565	Open in IMG/M
3300017955\|Ga0187817_10425299	Not Available	847	Open in IMG/M
3300017959\|Ga0187779_10018171	All Organisms → cellular organisms → Bacteria → Acidobacteria	4001	Open in IMG/M
3300017970\|Ga0187783_10121792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1922	Open in IMG/M
3300017972\|Ga0187781_10620680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300017973\|Ga0187780_10885458	Not Available	648	Open in IMG/M
3300017994\|Ga0187822_10234822	Not Available	624	Open in IMG/M
3300017994\|Ga0187822_10385037	Not Available	514	Open in IMG/M
3300018006\|Ga0187804_10362737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300018017\|Ga0187872_10006009	All Organisms → cellular organisms → Bacteria → Acidobacteria	8499	Open in IMG/M
3300018017\|Ga0187872_10171022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300018033\|Ga0187867_10319580	Not Available	867	Open in IMG/M
3300018034\|Ga0187863_10297115	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300018057\|Ga0187858_10470651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300018062\|Ga0187784_11507425	Not Available	532	Open in IMG/M
3300018086\|Ga0187769_11124864	Not Available	594	Open in IMG/M
3300018468\|Ga0066662_12874614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300020579\|Ga0210407_10235033	Not Available	1427	Open in IMG/M
3300020580\|Ga0210403_10074028	All Organisms → cellular organisms → Bacteria	2739	Open in IMG/M
3300020581\|Ga0210399_10403231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1140	Open in IMG/M
3300021171\|Ga0210405_10040107	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	3726	Open in IMG/M
3300021178\|Ga0210408_10038581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3757	Open in IMG/M
3300021402\|Ga0210385_11071359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300021406\|Ga0210386_10015439	All Organisms → cellular organisms → Bacteria	5962	Open in IMG/M
3300021420\|Ga0210394_10003073	All Organisms → cellular organisms → Bacteria	21624	Open in IMG/M
3300021420\|Ga0210394_10675439	Not Available	906	Open in IMG/M
3300021433\|Ga0210391_10246599	Not Available	1402	Open in IMG/M
3300021476\|Ga0187846_10007558	All Organisms → cellular organisms → Bacteria	5383	Open in IMG/M
3300021478\|Ga0210402_11968526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300021479\|Ga0210410_10000067	All Organisms → cellular organisms → Bacteria	176482	Open in IMG/M
3300021559\|Ga0210409_10150130	All Organisms → cellular organisms → Bacteria → Acidobacteria	2134	Open in IMG/M
3300021560\|Ga0126371_12716262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300025916\|Ga0207663_11699160	Not Available	508	Open in IMG/M
3300025939\|Ga0207665_10216758	Not Available	1401	Open in IMG/M
3300027548\|Ga0209523_1103591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	589	Open in IMG/M
3300027629\|Ga0209422_1103086	Not Available	658	Open in IMG/M
3300027826\|Ga0209060_10000370	All Organisms → cellular organisms → Bacteria	89210	Open in IMG/M
3300027842\|Ga0209580_10371303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300027842\|Ga0209580_10680859	Not Available	508	Open in IMG/M
3300027869\|Ga0209579_10117015	All Organisms → cellular organisms → Bacteria → Acidobacteria	1415	Open in IMG/M
3300027879\|Ga0209169_10457228	Not Available	671	Open in IMG/M
3300027889\|Ga0209380_10604391	Not Available	635	Open in IMG/M
3300027911\|Ga0209698_10000593	All Organisms → cellular organisms → Bacteria	41574	Open in IMG/M
3300027911\|Ga0209698_10006306	All Organisms → cellular organisms → Bacteria → Acidobacteria	12633	Open in IMG/M
3300027911\|Ga0209698_10007887	All Organisms → cellular organisms → Bacteria → Acidobacteria	11075	Open in IMG/M
3300027911\|Ga0209698_10013684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7990	Open in IMG/M
3300027911\|Ga0209698_10139925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1992	Open in IMG/M
3300028666\|Ga0265336_10067480	Not Available	1070	Open in IMG/M
3300028792\|Ga0307504_10017528	All Organisms → cellular organisms → Bacteria → Acidobacteria	1732	Open in IMG/M
3300028800\|Ga0265338_10206587	Not Available	1477	Open in IMG/M
3300030707\|Ga0310038_10116383	All Organisms → Viruses → Predicted Viral	1373	Open in IMG/M
3300031344\|Ga0265316_10075509	Not Available	2592	Open in IMG/M
3300031715\|Ga0307476_10550981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300031753\|Ga0307477_10484758	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300031754\|Ga0307475_10243065	All Organisms → cellular organisms → Bacteria → Acidobacteria	1442	Open in IMG/M
3300031823\|Ga0307478_10002413	All Organisms → cellular organisms → Bacteria → Acidobacteria	14716	Open in IMG/M
3300031823\|Ga0307478_10021607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4551	Open in IMG/M
3300031823\|Ga0307478_10085394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2417	Open in IMG/M
3300031962\|Ga0307479_10944530	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300032160\|Ga0311301_10672404	All Organisms → cellular organisms → Bacteria → Acidobacteria	1466	Open in IMG/M
3300032160\|Ga0311301_10690358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1438	Open in IMG/M
3300032160\|Ga0311301_11424714	Not Available	862	Open in IMG/M
3300032783\|Ga0335079_10814322	Not Available	966	Open in IMG/M
3300032805\|Ga0335078_10000058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	207900	Open in IMG/M
3300032828\|Ga0335080_10116447	All Organisms → cellular organisms → Bacteria → Acidobacteria	2966	Open in IMG/M
3300032892\|Ga0335081_10011324	All Organisms → cellular organisms → Bacteria	14420	Open in IMG/M
3300032893\|Ga0335069_10003049	All Organisms → cellular organisms → Bacteria → Acidobacteria	25501	Open in IMG/M
3300032893\|Ga0335069_10907359	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	984	Open in IMG/M
3300033134\|Ga0335073_10086582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4080	Open in IMG/M
3300034125\|Ga0370484_0015585	Not Available	1688	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.19%
Host-Associated	Host-Associated	4.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.27%
Aquatic	Environmental → Aquatic	26.92%
Plants	Host-Associated → Plants	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.31%
Freshwater	Environmental → Aquatic → Freshwater	18.27%
Sediment	Environmental → Aquatic → Sediment	8.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.88%
Cave	Environmental → Terrestrial → Cave	0.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.27%
Loam	Environmental → Terrestrial → Soil → Loam	10.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.88%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.62%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.88%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.96%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_101746032	3300004080	Bog Forest Soil	MQINDNSGKKIGRLDVSMSKDLVVTVHELRNITTITTRDRNTGRVTTETLIGESPFGK*
Ga0070713_1009878241	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRTMEINDNGGKKIGRLDVSISKDKVVTLHEIRNITTITVRDRNTGKVTTDTLIGESPFGK*
Ga0070731_107450361	3300005538	Surface Soil	MKTFDNGGEQIGRIDQSFSKDKSVTVHEIRNITTITVRDCNTGKVTTETLIGQSPFGTSE
Ga0070762_107363331	3300005602	Soil	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRNITTIMVRDRNTGKVTTETLFGQSPFGTSE
Ga0070764_102799291	3300005712	Soil	ADMQINNNRGEKIGRLDVSFSKDSTVTVHELNNVTTVTVRDRATGQVRTETLIGESPFGK
Ga0070766_108781802	3300005921	Soil	MQINNNRGEKIGRLDVSFSKDSTVTVHELNNVTTVTVRDRATGQVRTETLIGESPFGK*
Ga0075029_1000439016	3300006052	Watersheds	MQINNNRGEKIGRLDISFSKDSTVTVHELNNVTIVTVRDRSTGQVSTETLIGESPFGK*
Ga0075029_1000526074	3300006052	Watersheds	MQINNNRGEKIGRLDVSFSKDGTVTVHELNNITTITVRDRKTGTVTSETLIGESPFGK*
Ga0075017_1008851461	3300006059	Watersheds	FDNGGKQIGRIDQSFSKDKSVTVHEIRNITTVTVRDRSTGKVTTETLIGQSPFGTSE*
Ga0070716_1010789732	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MEIKDNRGKKIGRLDESMSNDKMVTVHELRNITTITVRDRNTGKVTTETLIGESPFGK*
Ga0075014_1001837212	3300006174	Watersheds	MKTFDNGGKQIGRIDQSFSNDKSVTVHEIRNITTITVRDRSTGKVTTETLIGQSPFGTSE
Ga0068871_1008031142	3300006358	Miscanthus Rhizosphere	MEIKDNRGKKIGRLDESMSMDKTVTVHELRNITTITVRDRNTRKVTTETLIGESPFGK*
Ga0116217_102213202	3300009700	Peatlands Soil	FDNGGKQIGRIDQSFSKDKSVTVHEIRNITTITVRDRSTGKVTTETLIGQSPFGTSE*
Ga0116223_107071602	3300009839	Peatlands Soil	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRNITTISVRDPITGKVTTETLIGQSPFGTSE
Ga0074046_100020086	3300010339	Bog Forest Soil	MQINDNSGKKIGRLDVSMSKDLVVTVHELRNITTITTRDRNTGRVTSETLVGESPFGTSE
Ga0074045_101923975	3300010341	Bog Forest Soil	GKKIGRLDVSMSKDLVVTVHELRNITTITTRDRNTGRVTSETLVGESPFGTSE*
Ga0126370_111633242	3300010358	Tropical Forest Soil	MEINDNSGKKIGRLDTSVSKDRVVTVHEIRNITTIITRDRNTGKIKSETLIGESPFGK*
Ga0126378_106107942	3300010361	Tropical Forest Soil	MKTFDNGGKQIGRIDQSFSKDKSVTVHETRNVTTITVRDRNTGKVTTETLIGQSPFGTSE
Ga0136449_1001616697	3300010379	Peatlands Soil	DNGGKQIGRIDQSFSKDKSVTVHEIRNITTISVRDRSTGKVTTETLIGQSPFGTSE*
Ga0136449_1011638741	3300010379	Peatlands Soil	QIGRLDVSMSNDKTVTVHELRNITTITVRDRNTGKVTTETLIGQSPFGTSE*
Ga0136449_1030474571	3300010379	Peatlands Soil	MQINDNSGKKIGRLDTSVSRDRAVTVHEIRNITTITTRDRNSGKVKSETLIGESP
Ga0126369_112750012	3300012971	Tropical Forest Soil	VKTFDNSGKQIGRIDQSFSKDKSVTVHEIRNVTTVTVRDRNTGKVTTETLIGQSPFGTSE
Ga0181532_1000038241	3300014164	Bog	MQINDNSGKKIGRLDISMSKDLVVTVHDFRNTTTITTRDRNTGKVTTETLVGESPFGTSE
Ga0181532_100244765	3300014164	Bog	MQINDNGGKKIGRIDTSVSRDRVVTVHQTRNVTIITTRDRNTGKVKSETLIGESPFGR*
Ga0182024_103871162	3300014501	Permafrost	MKIIDNGGKQIGRIDQSFSKDKSVTVHEHRNVTTVTVRDRNTGKVSSETFIGQSPFGTSE
Ga0182024_104351122	3300014501	Permafrost	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRHITTITVRDRNTGKVTTETLIGQSPFGTSE
Ga0181522_108917731	3300014657	Bog	MKILDNGGKQIGRIDQSFSKDKSVTVHEHRNVTTVTVRDRNTGKVSSETFIGQSPFGTGE
Ga0182030_107584292	3300014838	Bog	MKIFDNGGKQIGRIDQSFSKDKSVNVHELRNITTITTRDRNSGKVETETLVGESPFGTGE
Ga0132255_1062382981	3300015374	Arabidopsis Rhizosphere	MKAFDNGGKQIGRIDQSFSKDKSVTVHESRNVTTITVRDRNTGTVTTETLIGQSPFGTSE
Ga0187802_104672032	3300017822	Freshwater Sediment	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRNITTITVRDRSTGKVTTETLIGQSPFGTSE
Ga0187818_101540392	3300017823	Freshwater Sediment	MKIFDNGGKQIGRIDQSFSKDKSVTVHEIRNITTITVRDRNTGKVTTETLIGQSPFGTSE
Ga0187824_100126331	3300017927	Freshwater Sediment	MQINDNSGKKIGRLDVSMSNDKVVTVHELRNITTITVRDRNIGKVTTDTLIGESPFGK
Ga0187825_100273364	3300017930	Freshwater Sediment	MQINDNSGKKIGRLDVSMSNDKVVTVHELRNITTITVRDRNTGKVTTDTLIGESPFGK
Ga0187808_103124792	3300017942	Freshwater Sediment	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRNVTTITVRDRNTGKVTTETLIGQSPFGTSE
Ga0187879_106989041	3300017946	Peatland	MKTFDNGGKQIGRIDQSFSKDKSVTVHELRNITTITTRDRNSGRVETETLVGESLFGTGE
Ga0187817_104252994	3300017955	Freshwater Sediment	EETMKTFDNGGKQIGRIDQSFSKDKSVTVHELRNITTITVRDRNSGKVTTETLIGESPFGTSE
Ga0187779_100181714	3300017959	Tropical Peatland	MKILDNSGKQIGRISQSYSKDESVTVHEQRNVTTIVTRDRNTGKTRTEILVGQSPFGKGE
Ga0187783_101217923	3300017970	Tropical Peatland	MKIFDNGGKQIGRIDQSFSKDKSVTVHEIRNVTTITVRDRNTGKVTTETLIGQSPFGTSE
Ga0187781_106206802	3300017972	Tropical Peatland	MKTYDNGGKQIGRIDQSFSKDKSVTVHELRNVTTITVRDRNTGKVTTETLVGQSPFGTSE
Ga0187780_108854582	3300017973	Tropical Peatland	MKTFDNGGKQIGRLDVSMSGDKVVTVHELRNITTITVRDRSTGKVTTETLI
Ga0187822_102348223	3300017994	Freshwater Sediment	QREDSRQGGTMQINDNSGKKIGRLDVSMSNDKVVTVHELRNITTITVRDRNTGKVTTDTLIGESPFGK
Ga0187822_103850371	3300017994	Freshwater Sediment	MQINNNRGEKIGRLDVSFSKDVTVTVHELNNVTTVTVRDRKTGTVTSETLIGESPFGK
Ga0187804_103627371	3300018006	Freshwater Sediment	MKTFDNGGKQIGRIDQSFSKDKSVTVHELRNITTITVRDRSTGKVTTETLIGQSPFGTSE
Ga0187872_100060095	3300018017	Peatland	MQINDNSGKKIGRLDVSMSKDLVVTVHELRNITTITTRDRNTGKVTTETLVGESPFGTSE
Ga0187872_101710221	3300018017	Peatland	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRNITTITVRDRSTGQVTTETLIGQSPFGTSE
Ga0187867_103195802	3300018033	Peatland	MKIFDNGGKQIGRIDQSFSKDKSVTVHELRNITTITTRDRNSGRVETETLVGESLFGTGE
Ga0187863_102971152	3300018034	Peatland	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRNITTITVRDSNTGKVTTETLIGQSPFGTSE
Ga0187858_104706511	3300018057	Peatland	KQIGRIDQSFSKDKSVTVHEIRNITTITVRDRSTGQVTTETLIGQSPFGTSE
Ga0187784_115074252	3300018062	Tropical Peatland	MKVFDNSGRQIGRLDVSMSNDKTVTVHEIRNITTITVRDRKTGKTVTDTLIGESPFGK
Ga0187769_111248641	3300018086	Tropical Peatland	VKTFDNSGKQIGRIDQSFSKDKSVTVHEIRNITTIMVRDRNTGKVTTETLIGQSPFGTSE
Ga0066662_128746141	3300018468	Grasslands Soil	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRSITTITVRDRSTGKATTETLIGQSPFGTSE
Ga0210407_102350333	3300020579	Soil	MQINDNSGKKIGRLDTSVSKDRVVTVHEIRNITTITTRDRDTGKVKTETLIGESPFGK
Ga0210403_100740282	3300020580	Soil	MKIFDNSRKQIGRLDVSMSNDKTVTVHKLRNITTITVRDRNTGKVTTETLIGQSPFGTSE
Ga0210399_104032312	3300020581	Soil	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRNITTITVRDRSTGKVTTETLIGQSPFGTRE
Ga0210405_100401074	3300021171	Soil	MQINDNSGKKIGRLDTSVSRDRVVTVHEIRNITTITTRDRNTGKVKTETLIGESPFGK
Ga0210408_100385813	3300021178	Soil	MKIFDNSRKQIGRLDVSMSNDKTVTVHKLRNITTITVRDRNTGKVTTETLTGQSPFGTSE
Ga0210385_110713591	3300021402	Soil	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRNITTITVRDRNTGKVTTETLIGQSPFGTSE
Ga0210386_100154391	3300021406	Soil	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRNITTITVRDRSTGKVTTE
Ga0210394_1000307321	3300021420	Soil	MQTNDNSGKKIGRLDTSVSRDRVVTVHEIRNITTITTRDRNTGKVKTETLIGESPFGK
Ga0210394_106754392	3300021420	Soil	MQINDNSGKKIGRLDTSVSKDRVVTVHEIRNITTITTRDRNTGKTKTETLIGESPFGK
Ga0210391_102465994	3300021433	Soil	MRIHDNWGKKIGRLDVGMSKDLVVTVHELHNITTITTRDRNTGKVTTETLAGESPFGTSE
Ga0187846_1000755810	3300021476	Biofilm	MQINDNGGKKIGRLDTSVSRDRVVTVHEIRNVTAITTRDRNTGKVKTETLIGELLFGK
Ga0210402_119685262	3300021478	Soil	ETMKTFDNGGKQIGRIDQSFSKDKSVTVHEIRNITTITVRDRSTGKVTTETLIGQSPFGTRE
Ga0210410_1000006710	3300021479	Soil	MQTFDNGGKQIGRIDQSFSKDKSVTVHEIRNITTITVRDRSTGEVTTETLIGQSPFGTSE
Ga0210409_101501304	3300021559	Soil	MQINDNSGKKIGRLDTSVSKDRVVTVHEIRNITTITTRDRNTGKVKTETLIGESPFGK
Ga0126371_127162621	3300021560	Tropical Forest Soil	MKIFDNGGKQIGRIDQSFSKDKSVTVHELRNITTITVRDRSTGKVTTETLIGQSPFGTSE
Ga0207663_116991602	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	NRGKKIGRLDESMSMDKTVTVHELRNITTITVRDRNTGKVTTETLIGESPFGK
Ga0207665_102167584	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MEIKDNRGKKIGRLDVSMSKDKVVTVHELRNITTITVRDRNTGKVTTETLIGESPFGK
Ga0209523_11035911	3300027548	Forest Soil	MDINDNRGSKIGRLDVSMSKDKVVTVHEIRNITTITVRDRNTGKVTTATLIGQSPFGTSE
Ga0209422_11030861	3300027629	Forest Soil	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRNITTISVRDRSTGKVTTETLIGQSPFGTSE
Ga0209060_1000037080	3300027826	Surface Soil	MKTFDNSGKQIGRIDQSFSKDKTVTVHELRNITTITVRDRNTGKLTTETLIGQSPFGTSE
Ga0209580_103713032	3300027842	Surface Soil	MKIFDNSRKQIGRLDVSMSNDKTVTVHELRNITTITVRDRNTGKVTTETLIGQSPFGTSE
Ga0209580_106808591	3300027842	Surface Soil	NSGKKIGRLDVSMSKDKTVTVHELRNVTTITVRDRNTGKVTTETLIGESPFGK
Ga0209579_101170153	3300027869	Surface Soil	MKTFDNGGKQIGRIDQSFSKDKSVTVHELRNITTITVRDRKTGKVTTETLIGQSPFGTSE
Ga0209169_104572281	3300027879	Soil	EFGGADMQINNNRGEKIGRLDVSFSKDSTVTVHELNNVTTVTVRDRATGQVRTETLIGESPFGK
Ga0209380_106043912	3300027889	Soil	MQINNNRGEKIGRLDVSFSKDSTVTVHELNNVTTVTVRDRATGQVRTETLIGESPFGK
Ga0209698_1000059337	3300027911	Watersheds	VKTFDNSGKKIGRIDQSFSKDKSVTVHELRNITTITVRDRNTGRVTTETLIGQSPFGTSE
Ga0209698_100063069	3300027911	Watersheds	MQINNNRGEKIGRLDISFSKDSTVTVHELNNVTIVTVRDRSTGQVSTETLIGESPFGK
Ga0209698_1000788716	3300027911	Watersheds	MKTFDNGGKQIGRIDQSFSKEKSVTVHEIRNITTITVRDRNTGKVTTETLIGQSPFGTSE
Ga0209698_100136844	3300027911	Watersheds	MQINNNRGEKIGRLDVSFSKDGTVTVHELNNITTITVRDRKTGTVTSETLIGESPFGK
Ga0209698_101399254	3300027911	Watersheds	MKTFDNGGKQIGRIDQSFSKDRSVTVHEIRNITTITVRDRSTGKVTTETLIGQSPFGTGE
Ga0265336_100674801	3300028666	Rhizosphere	MQINDNSGKKIGRLDVSMSKDSVVTVHELRNITTITVRDRNTGKVTTETLVGESPFGTSE
Ga0307504_100175283	3300028792	Soil	MQINDNSGKKIGRLDISVSKESVVTVHELRNMTTITTRDRNTGEVETETLIGESPFGT
Ga0265338_102065871	3300028800	Rhizosphere	RLDVSMSKDSVVTVHELRNITTITVRDRNTGKVTTETLVGESLFGTSE
Ga0310038_101163832	3300030707	Peatlands Soil	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRRITTITVRDRNTGKVTTETLIGQSPFGTSE
Ga0265316_100755095	3300031344	Rhizosphere	MQINDNSGKKIGRLDVSMSKDSVVTVHELRNITTITVRDRNTGKVTTETLVGESLFGTSE
Ga0307476_105509812	3300031715	Hardwood Forest Soil	MKTFDNGSKQIGRIDQSFSKDKSVTVHELRNITTITVRDRSTGKVTTETLIGESPFDTSE
Ga0307477_104847583	3300031753	Hardwood Forest Soil	MKIFDNSRKQIGRLDVSMSNDKTVTVHELRNITTITVRDRNTGKVMTETLIGQSPFGTSE
Ga0307475_102430653	3300031754	Hardwood Forest Soil	MKTFDNGGKQIGRLDVSTSGDKVVTVHELRNITTVTVRDRSTGKVTTDTLIGQSPFGTSE
Ga0307478_1000241317	3300031823	Hardwood Forest Soil	MKIFDNSRKQIGRLDVSMSNDTTVTVHELRNITTITVRDRNTGKVTTETLIGQSPFGTSE
Ga0307478_100216071	3300031823	Hardwood Forest Soil	KQIGRIDQSFSKDKSVTVHEIRNITTITVRDRNTGKVTTETLIGQSPFGTSE
Ga0307478_100853943	3300031823	Hardwood Forest Soil	MKTFDNGGKQIGRLDVSMSGDKVVTVHELRNITTITVRDRSTGKVTTETLIGQSPFGTSE
Ga0307479_109445302	3300031962	Hardwood Forest Soil	MKTFDNGGEQIGRIDQSFSKDKSVTVHELRNVTTITVRDRNTGKLTTETLIGQSPFGTSE
Ga0311301_106724042	3300032160	Peatlands Soil	MQINDNSGKKIGRLDVSMSKDLVVTVHELRNITTIARRDRNTGKVTTETLVGESPFGTSE
Ga0311301_106903583	3300032160	Peatlands Soil	DGKQIGRIDQSFSKDKSVTVHEIRNITTITVRDRSTGKVTTETLIGQSPFGTSE
Ga0311301_114247142	3300032160	Peatlands Soil	MQINDNSGKKIGRLDTSVSRDLVVTVHEIRNITTITTRDRNTGKVKTETLIGESPFGK
Ga0335079_108143222	3300032783	Soil	MEISDNRGKKIGRLDVSISKDKVVTVHELRNVTTITVRDRNNGKVTTETLIGESPFGK
Ga0335078_100000583	3300032805	Soil	MKTFDNSGKQIGRIDQSFSKDKSVTVHELRNITTITVRDRSTGKVTTETLIGQSPFGTSE
Ga0335080_101164475	3300032828	Soil	MQINDNSGKKIGRIDTRVSRDRVVTVHETRNVTIITTRDRNTGKVKTETFIGESRFGK
Ga0335081_1001132412	3300032892	Soil	MKTFDNGGKQIGRIDQSFSKDKSVTVHELRNITTITLRDRSTGKVTTETLIGQSPFGTSE
Ga0335069_100030497	3300032893	Soil	VKTFDNSGKQIGRIDQSFSKDKSVTVHEIRNITTVTVRDRNTGKVTTETLIGQSPFGTSE
Ga0335069_109073593	3300032893	Soil	MKTFDNGGKQIGRIDQSFSKDKSVTVHEIRNVTTITVRDRNTEKVTTETLIGQSPFGSSE
Ga0335073_100865823	3300033134	Soil	MKTFDNGGKQVGRIDQSFSKDKSVTVHELRNITTITVRDRSTGKVTTETLIGQSPFGTSE
Ga0370484_0015585_896_1078	3300034125	Untreated Peat Soil	MQINDNSGKKIGRLDISMSKDLVVTVHELRNITTITTRDRNSGKVETETLVGESPFGTSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097887

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences