Metagenome / Metatranscriptome Family F097937

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097937
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	104 residues
Representative Sequence	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGADDE
Number of Associated Samples	87
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	24.04 %
% of genes near scaffold ends (potentially truncated)	41.35 %
% of genes from short scaffolds (< 2000 bps)	72.12 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.077 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.731 % of family members)
Environment Ontology (ENVO)	Unclassified (41.346 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.577 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.21% β-sheet: 39.64% Coil/Unstructured: 53.15%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04075	F420H2_quin_red	1.92
PF13360	PQQ_2	1.92
PF00589	Phage_integrase	1.92
PF00106	adh_short	0.96
PF08281	Sigma70_r4_2	0.96
PF07681	DoxX	0.96
PF00027	cNMP_binding	0.96
PF13620	CarboxypepD_reg	0.96
PF01339	CheB_methylest	0.96
PF00135	COesterase	0.96
PF03069	FmdA_AmdA	0.96
PF00144	Beta-lactamase	0.96
PF11453	DUF2950	0.96
PF13176	TPR_7	0.96
PF02626	CT_A_B	0.96
PF07676	PD40	0.96
PF14534	DUF4440	0.96
PF01548	DEDD_Tnp_IS110	0.96
PF13676	TIR_2	0.96
PF07677	A2M_recep	0.96
PF07690	MFS_1	0.96
PF12867	DinB_2	0.96
PF12833	HTH_18	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.92
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.96
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.96
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.96
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.96
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.96
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.96
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	87.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.88 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	79.81 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.92 %
Unclassified	root	N/A	1.92 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	79.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.92 %
Unclassified	root	N/A	1.92 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.96 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	79.81 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.92 %
Unclassified	root	N/A	1.92 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	79.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.92 %
Unclassified	root	N/A	1.92 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.96 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	79.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.92 %
Unclassified	root	N/A	1.92 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	0.96 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	79.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.92 %
Unclassified	root	N/A	1.92 %
Granulicella sp. GAS466	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. GAS466	0.96 %
Anaerolineaceae bacterium 4572_32.2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium 4572_32.2	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100066141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3325	Open in IMG/M
3300003505\|JGIcombinedJ51221_10213301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300004103\|Ga0058903_1005704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1291	Open in IMG/M
3300004103\|Ga0058903_1028466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300004119\|Ga0058887_1468751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300004479\|Ga0062595_100055365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1847	Open in IMG/M
3300005167\|Ga0066672_10009753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4557	Open in IMG/M
3300005435\|Ga0070714_101729662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300005542\|Ga0070732_10016649	All Organisms → cellular organisms → Bacteria	4109	Open in IMG/M
3300005554\|Ga0066661_10006183	All Organisms → cellular organisms → Bacteria	5653	Open in IMG/M
3300005578\|Ga0068854_101720656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300005921\|Ga0070766_10868771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300006028\|Ga0070717_11137587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300006041\|Ga0075023_100033255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1530	Open in IMG/M
3300006052\|Ga0075029_100005211	All Organisms → cellular organisms → Bacteria	7193	Open in IMG/M
3300006086\|Ga0075019_10145335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1384	Open in IMG/M
3300006173\|Ga0070716_100192006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1350	Open in IMG/M
3300006175\|Ga0070712_101272677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300006176\|Ga0070765_100255185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1609	Open in IMG/M
3300006794\|Ga0066658_10004016	All Organisms → cellular organisms → Bacteria → Acidobacteria	5230	Open in IMG/M
3300010048\|Ga0126373_10324373	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300010358\|Ga0126370_10081927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2173	Open in IMG/M
3300010376\|Ga0126381_104038105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300011120\|Ga0150983_11528412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1224	Open in IMG/M
3300011120\|Ga0150983_12000077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1122	Open in IMG/M
3300011120\|Ga0150983_13854016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1585	Open in IMG/M
3300011120\|Ga0150983_14638182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1072	Open in IMG/M
3300012971\|Ga0126369_11273725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300012971\|Ga0126369_11470680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300013104\|Ga0157370_10139199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2261	Open in IMG/M
3300013297\|Ga0157378_10274619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1622	Open in IMG/M
3300015371\|Ga0132258_10571784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium 4572_32.2	2835	Open in IMG/M
3300015372\|Ga0132256_103674001	Not Available	516	Open in IMG/M
3300016371\|Ga0182034_10990747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300018468\|Ga0066662_10909906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300020580\|Ga0210403_10055796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3161	Open in IMG/M
3300020580\|Ga0210403_10679153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300020581\|Ga0210399_10013017	All Organisms → cellular organisms → Bacteria → Acidobacteria	6535	Open in IMG/M
3300020581\|Ga0210399_11015603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300020583\|Ga0210401_10216451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1773	Open in IMG/M
3300020583\|Ga0210401_10261072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1591	Open in IMG/M
3300020583\|Ga0210401_10565733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	998	Open in IMG/M
3300021168\|Ga0210406_10013110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7993	Open in IMG/M
3300021171\|Ga0210405_11345613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300021178\|Ga0210408_11056026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300021401\|Ga0210393_11440966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300021403\|Ga0210397_10022503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3887	Open in IMG/M
3300021403\|Ga0210397_10725337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300021406\|Ga0210386_10034062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4007	Open in IMG/M
3300021420\|Ga0210394_10066826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3117	Open in IMG/M
3300021432\|Ga0210384_10498466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1096	Open in IMG/M
3300021433\|Ga0210391_10526222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300021477\|Ga0210398_11404117	Not Available	546	Open in IMG/M
3300021479\|Ga0210410_10157164	All Organisms → cellular organisms → Bacteria → Acidobacteria	2028	Open in IMG/M
3300022504\|Ga0242642_1026730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300022505\|Ga0242647_1001926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1423	Open in IMG/M
3300022507\|Ga0222729_1038269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300022523\|Ga0242663_1003938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1705	Open in IMG/M
3300022525\|Ga0242656_1007459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1381	Open in IMG/M
3300022528\|Ga0242669_1059950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300022530\|Ga0242658_1210911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300022531\|Ga0242660_1024244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1175	Open in IMG/M
3300022531\|Ga0242660_1151122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300022531\|Ga0242660_1257226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300022717\|Ga0242661_1071008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300022718\|Ga0242675_1098735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300022724\|Ga0242665_10013009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1761	Open in IMG/M
3300022726\|Ga0242654_10061430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1093	Open in IMG/M
3300025911\|Ga0207654_10437618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	915	Open in IMG/M
3300025915\|Ga0207693_10844229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300026078\|Ga0207702_10024101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5049	Open in IMG/M
3300026309\|Ga0209055_1007092	All Organisms → cellular organisms → Bacteria → Acidobacteria	6267	Open in IMG/M
3300026325\|Ga0209152_10000090	All Organisms → cellular organisms → Bacteria	44943	Open in IMG/M
3300027548\|Ga0209523_1040969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300027583\|Ga0209527_1089625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300027842\|Ga0209580_10003220	All Organisms → cellular organisms → Bacteria	6997	Open in IMG/M
3300027869\|Ga0209579_10620608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300027898\|Ga0209067_10260819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300027910\|Ga0209583_10032662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1739	Open in IMG/M
3300027911\|Ga0209698_10005396	All Organisms → cellular organisms → Bacteria → Acidobacteria	13839	Open in IMG/M
3300027915\|Ga0209069_10073289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1627	Open in IMG/M
3300030730\|Ga0307482_1071832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300031057\|Ga0170834_104855460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1243	Open in IMG/M
3300031128\|Ga0170823_16810423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300031446\|Ga0170820_16102310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300031474\|Ga0170818_103296496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300031590\|Ga0307483_1002274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1315	Open in IMG/M
3300031663\|Ga0307484_103218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300031715\|Ga0307476_10222984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1372	Open in IMG/M
3300031718\|Ga0307474_10044579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3272	Open in IMG/M
3300031753\|Ga0307477_10167697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1531	Open in IMG/M
3300031753\|Ga0307477_10421526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300031753\|Ga0307477_10425701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300031753\|Ga0307477_10718020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300031754\|Ga0307475_10010066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6243	Open in IMG/M
3300031754\|Ga0307475_10025540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. GAS466	4215	Open in IMG/M
3300031754\|Ga0307475_10372601	All Organisms → cellular organisms → Bacteria → Acidobacteria	1147	Open in IMG/M
3300031820\|Ga0307473_10030315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2346	Open in IMG/M
3300031823\|Ga0307478_10101936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2224	Open in IMG/M
3300031962\|Ga0307479_10009623	All Organisms → cellular organisms → Bacteria	8956	Open in IMG/M
3300032001\|Ga0306922_11468670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300032180\|Ga0307471_100129683	All Organisms → cellular organisms → Bacteria	2373	Open in IMG/M
3300032205\|Ga0307472_100582828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300033412\|Ga0310810_10127624	All Organisms → cellular organisms → Bacteria → Acidobacteria	2992	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.27%
Host-Associated	Host-Associated	6.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.54%
Aquatic	Environmental → Aquatic	6.73%
Plants	Host-Associated → Plants	6.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.54%
Sediment	Environmental → Aquatic → Sediment	6.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.23%
Loam	Environmental → Terrestrial → Soil → Loam	17.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	16.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.58%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1000661415	3300002245	Forest Soil	VHDVSVMDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQNGVFFHLGADDE*
JGIcombinedJ51221_102133012	3300003505	Forest Soil	MDAHDLLNNLTNGQGFVGNGLNIPPIAAVPATVSLDIEWSGVIDSQKVVNDNQSFRGHFVKTGATINWSAQASQQGGFSFVSEAPNPVRNRYSIIAHEQNGVFFHLDDE*
Ga0058903_10057042	3300004103	Forest Soil	VHDVSVMDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVNDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDDD*
Ga0058903_10284661	3300004103	Forest Soil	MDAHDLLNNLTGGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLEADDE*
Ga0058887_14687511	3300004119	Forest Soil	HADLDEGFATLRVHDVSVMDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSDVIDSQKVVNENQNFRGHFVKTGATIDWSAQSSQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLEAGDE*
Ga0062595_1000553653	3300004479	Soil	MDAHDLLNNLTGGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQPSQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL*
Ga0066672_100097534	3300005167	Soil	MRDVPVMDAHDLLNNLTNGKGFSGMGLNIPPIAPVPATVSFDIEWSGVIASARFVNEMQTFRGNFVRTGATIKWSAEPSSQGGFAFESETPDPARNRYSIIGHEQNGVFFHLD*
Ga0070714_1017296621	3300005435	Agricultural Soil	LRVQDASVMDAHDLLNNLTDGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL*
Ga0070732_100166492	3300005542	Surface Soil	VRVQDASVMDAHDLLNNLTGGQGFSGNGLDIPPIAAVSATVSFDIEWSGVIESQKVVNENHSFRGQFVKTGATINWSAQASQPGGFSFVSEAPNPIRNRYSIIAHEQNGVFFHL*
Ga0066661_100061833	3300005554	Soil	MGLNIPPIAPVPATVSFDIEWSGVIASARFVNEMQTFRGNFVRTGATIKWSAEPSSQGGFAFESETPDPARNRYSIIGHEQNGVFFHLD*
Ga0068854_1017206561	3300005578	Corn Rhizosphere	IAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQPSQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL*
Ga0070766_108687712	3300005921	Soil	VMDAHDLLNNLTGGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGADDE*
Ga0070717_111375871	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LNIPPIAAVQATVSFDIEWSGVIESQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL*
Ga0075023_1000332553	3300006041	Watersheds	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVNDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDDD*
Ga0075029_1000052118	3300006052	Watersheds	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHERNGVFFHLGDDDD*
Ga0075019_101453352	3300006086	Watersheds	LNIPPIAAVPATVSFDIEWSGVNDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHERNGVFFHLGDDDD*
Ga0070716_1001920061	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDAHDLLNNLTGGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQPSQPGAFSFVSEAPNPMRNRYSIIAHEQNGVFFHL*
Ga0070712_1012726771	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LDEGFGSLRVQDASVMDAHDLLNNLTGGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQPSQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL*
Ga0070765_1002551851	3300006176	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQNGVFFHLGADDE*
Ga0066658_100040163	3300006794	Soil	MGLNIPPIAPVPATVSFDIEWSGVIASARFVNEMQTFRGNFVRTGATIKWSAEPSSQGGFAFESETPDPARNRYSIIGHEQNGVFIHLD*
Ga0126373_103243733	3300010048	Tropical Forest Soil	VNDAHDLLNNLTNGQGFSGNGLNIPAIAAVPATVSFDIEWSGAIESQQVVNENQSYRGHFVKTGATINWSAQASQPGGFSFVSEAPNPLRNRYSVIAHEQNGVFFHLGDD*
Ga0126370_100819271	3300010358	Tropical Forest Soil	LNIPPIAAVSATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL*
Ga0126381_1040381051	3300010376	Tropical Forest Soil	LNIPPIAAVPATVSFDIEWSGFIDSQKIVNENQSYRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDD*
Ga0150983_115284122	3300011120	Forest Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDND*
Ga0150983_120000771	3300011120	Forest Soil	MDAHDLLNNLTGGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDND*
Ga0150983_138540161	3300011120	Forest Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSDVIDSQKVVNENQNFRGHFVKTGATIDWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLEAGDE*
Ga0150983_146381821	3300011120	Forest Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQASQPEGFSFVSETPNPMRNRYSIIAHEQNGVFFHLGDE*
Ga0126369_112737252	3300012971	Tropical Forest Soil	VQDVSVSDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGFIDSQKIVNENQSYRGHFVKTGATINWSAHASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDD*
Ga0126369_114706802	3300012971	Tropical Forest Soil	IPPIASVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL*
Ga0157370_101391992	3300013104	Corn Rhizosphere	MDAHDLVNNLTDGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQPSQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL*
Ga0157378_102746193	3300013297	Miscanthus Rhizosphere	MDAHDLLNNLTGGQGFSGSGLNLPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQPSQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL*
Ga0132258_105717843	3300015371	Arabidopsis Rhizosphere	MRDVPVSDAHDLLNNLTDGKGFTGMGLNIPPIAPVPATVSFNIEWNGIISSSKIVNEMQTFRGHFVRTGATIDWSAAPSKQGGFAFQSETPNPARNRYSVIGHEQNGVFFHPEDDD*
Ga0132256_1036740011	3300015372	Arabidopsis Rhizosphere	MSDVPVSDAHDLLNNLTDGKGFTGMGLNIPPIAPVPATVSFNIEWNGIISSSKIVNEMQTFRGHFVRTGATIDWSAAPSKQGGFAFQSETPNPARNRYSVIGHEQNGVFFH
Ga0182034_109907471	3300016371	Soil	LNIPPIAAVPATVSFDIEWSGVIDSQKVVNENHSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPIRNRYSIIAHEQNGVFFHLGDDDD
Ga0066662_109099061	3300018468	Grasslands Soil	DGFASLRMRDVPVMDAHDLLNNLTNGKGFSGMGLNIPPIAPVPATVSFDIEWSGVIASARFVNEMQTFRGNFVRTGATIKWSAEPSSQGGFAFESETPDPARNRYSIIGHEQNGVFFHLD
Ga0210403_100557964	3300020580	Soil	MDAHDLLNNLTNGQGFVGNGLNIPPIAAVPAAVSLDIEWSGVIDSQRVVNENQNFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPIRNRYSIIAHEQNGVFFHLGDD
Ga0210403_106791532	3300020580	Soil	DAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQNGVFFHLGADDE
Ga0210399_1001301712	3300020581	Soil	AIQADLDEGFASLRVHDVPVMDAHDLLNNLTNGQGFVGNGLNIPPIAAVPAAVSLDIEWSGVIDSQRVVNENQNFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPIRNRYSIIAHEQNGVFFHLGDD
Ga0210399_110156031	3300020581	Soil	DLEEGFAALRVHDVSVMDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQNGVFFHLGADDE
Ga0210401_102164514	3300020583	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAAPATVSFDIEWSGVIDSEKVVNENQSFRGRFVKTGATINWSAQASQQGGFSFVSEAPNPVRNRYSIIAH
Ga0210401_102610722	3300020583	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDDD
Ga0210401_105657332	3300020583	Soil	MDAHDLLNNLTNGQGFVGNGLNIPPIAAVPATVSLDIEWSGVIDSQKVVNDNQSFRGHFVKTGATINWSAQASQQGGFSFVSEAPNPVRNRYSIIAHEQNGVFFHLDDE
Ga0210406_100131104	3300021168	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPKTMRNRYSIIAHEQNGVFFHLGADDE
Ga0210405_113456131	3300021171	Soil	GLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQNGVFFHLGAEDE
Ga0210408_110560261	3300021178	Soil	DLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDND
Ga0210393_114409661	3300021401	Soil	PIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQNGVFFHLGADDE
Ga0210397_100225037	3300021403	Soil	MDAHDLLNNLTNGQGFVGNGLNIPPIAAVPATVSLDIEWSGVIDSQKVVNDNQSFRGHFVKTGATINWSAQASQQGGFSFVSEAPNPVRNRYSIIAHEQNGVFFHL
Ga0210397_107253372	3300021403	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQSGGFSFVSEAPNTMRNRYSIIAHEQNGVFFHLGADDE
Ga0210386_100340622	3300021406	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDND
Ga0210394_100668264	3300021420	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQNGVFFHLGADDE
Ga0210384_104984662	3300021432	Soil	GFASLRVQDVSVMDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDDD
Ga0210391_105262222	3300021433	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGADDE
Ga0210398_114041171	3300021477	Soil	VSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQNGVFFHLGADDE
Ga0210410_101571644	3300021479	Soil	MDAHDLLNNLTDGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLEADDE
Ga0242642_10267302	3300022504	Soil	MDAHDLLNNLTNGQGFVGNGLNIPPIAAVPATVSLDIEWSGVIDSQKVVNDNQSFRGHFVKTGATINWSAQASQQGGFSFVSEAPNPVRNRYSIIAH
Ga0242647_10019262	3300022505	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFSGHFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQNGVFFHLGADDE
Ga0222729_10382691	3300022507	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSDVIDSQKVVNENQNFRGHFVKTGATIDWSAQASQPGGFSFVSEAPKTMRNRYSIIAHEQNGVFFHLGADDE
Ga0242663_10039382	3300022523	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGRFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQNGVFFHLGADDE
Ga0242656_10074591	3300022525	Soil	MDAHDLLNNLTNGQGFVGNGLNIPPIAAVPAAVSLDIEWSGVIDSQRVVNENQNFRGHFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQNGVFFHLGADDE
Ga0242669_10599501	3300022528	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGRFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQNGVFFHLGDDDV
Ga0242658_12109111	3300022530	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPKTMRNRYSIIAHEQNGVFFH
Ga0242660_10242441	3300022531	Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQN
Ga0242660_11511222	3300022531	Soil	MDAHDLLNNLTNGQGFVGNGLNIPPIAAVPATVSLDIEWSGVIDSQKVVNDNQSFRGHFVKTGATINWSAQASQQGGFSFVSEAPNPVR
Ga0242660_12572262	3300022531	Soil	GNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDND
Ga0242661_10710082	3300022717	Soil	MDAHDLLNNLTNGQGFVGNGLNIPPIAAVPATVSLDIEWSGVIDSQRVVNENQNFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPI
Ga0242675_10987351	3300022718	Soil	VHDVPVMDAHDLLNNLTNGQGFVGNGLNIPPIAAVPATVSLDIEWSGVIDSQKVVNDNQSFRGHFVKTGATINWSAQASQQGGFSFVSEAPNPVRNRYSIIAHEQNGVFFHLGDDDD
Ga0242665_100130091	3300022724	Soil	MDAHDLLNNLTNGQGFVGNGLNIPPIAAVHATVSLDIEWSGVIDSQKVVNDNQSFRGHFVKTGATINWSAQASQQGGFSFVSEAPNPVRNRYSIIAHEQNGVFFHLDDE
Ga0242654_100614301	3300022726	Soil	MDAHDLLNNLTKGQGFSGMGLNIPPIAPVPASVSFDIEWSGIIGSAKVINEMQTFRGKYVRTGATIRWSAEPSQQGGFAFQSEAPDPTRNRYSII
Ga0207654_104376181	3300025911	Corn Rhizosphere	LNIPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQPSQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL
Ga0207693_108442291	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	IHADLDEGFGSLRVQDASVMDAHDLLNNLTGGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQPSQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL
Ga0207702_100241011	3300026078	Corn Rhizosphere	IRADLDEGFGSLRVQDASVMDAHDLLNNLTGGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQPSQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL
Ga0209055_10070929	3300026309	Soil	MGLNIPPIAPVPATVSFDIEWSGVIASARFVNEMQTFRGNFVRTGATIKWSAEPSSQGGFAFESETPDPARNRYSIIGHEQNGVFFHLD
Ga0209152_1000009045	3300026325	Soil	MGLNIPPIAPVPATVSFDIEWSGVIASARFVNEMQTFRGNFVRTGATIKWSAEPSSQGGFAFESETPDPARNRYSIIGHEQNGVFIHLD
Ga0209523_10409692	3300027548	Forest Soil	LNIPPIAAVPATVSFDIEWNGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPIRNRYSIIAREQNGVFFHLGDDND
Ga0209527_10896251	3300027583	Forest Soil	VHDVSVMDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNTMRNRYSIIAHEQNG
Ga0209580_100032205	3300027842	Surface Soil	LDIPPIAAVSATVSFDIEWSGVIESQKVVNENHSFRGQFVKTGATINWSAQASQPGGFSFVSEAPNPIRNRYSIIAHEQNGVFFHL
Ga0209579_106206082	3300027869	Surface Soil	MDAHDLLNNLTNGQGFVGNGLNIPPIAAVPATVSLDIEWSGVIDSQKVVNDNQSFRGHFVKTGATINWSAQASQQGGFSFVSEAPNPARNRYS
Ga0209067_102608192	3300027898	Watersheds	LNIPPIAAVPATVSFDIEWSGVNDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHERNGVFFHLGDDDD
Ga0209583_100326623	3300027910	Watersheds	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQRVVNENQNFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDDD
Ga0209698_100053962	3300027911	Watersheds	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHERNGVFFHLGDDDD
Ga0209069_100732892	3300027915	Watersheds	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVNDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDDD
Ga0307482_10718322	3300030730	Hardwood Forest Soil	LNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWAAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDDD
Ga0170834_1048554601	3300031057	Forest Soil	MDAHDLLNNLTGGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQPSQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHV
Ga0170823_168104233	3300031128	Forest Soil	MDAHDLLNNLTGGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQPSQPGAFSFVSEAPNPMQSKQNKARKKLN
Ga0170820_161023101	3300031446	Forest Soil	ADLDEGFGSLRVQDASVMDAHDLLNNLTGGQGFSGNGLNIPPVAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQPSQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL
Ga0170818_1032964961	3300031474	Forest Soil	ADLDEGFGSLRVQDASVMDAHDLLNNLTGGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIESQKVVNENQSFRGQFVKTGATINWSAQPSQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHL
Ga0307483_10022742	3300031590	Hardwood Forest Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDLEWSGVIDSQKVVNENQSFRGHFVKTGATINWAAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDDD
Ga0307484_1032181	3300031663	Hardwood Forest Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWAAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDD
Ga0307476_102229842	3300031715	Hardwood Forest Soil	LNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPTRNRYSIIAHEQNGVFFHLGADD
Ga0307474_100445791	3300031718	Hardwood Forest Soil	VRVHDVPVMDAHDLLNNLTNGQGFSGNGLNIPPIAAAPATVSFDIEWSGVIDSEKVVNENQSFRGRFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFQLEADDE
Ga0307477_101676972	3300031753	Hardwood Forest Soil	MDAHDLLNNLTKGQGFSGNGLNIPPIAAVPATVSLDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWLAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDEDD
Ga0307477_104215262	3300031753	Hardwood Forest Soil	MDAHDLLNNLTNGQGFSGNGLIIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSETPNPMRNRYSI
Ga0307477_104257012	3300031753	Hardwood Forest Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWAAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDDD
Ga0307477_107180201	3300031753	Hardwood Forest Soil	EGFASLRVDDVSVMDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPTRNRYSIIAHEQNGVFFHLGADD
Ga0307475_1001006610	3300031754	Hardwood Forest Soil	AAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWAAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDDD
Ga0307475_100255409	3300031754	Hardwood Forest Soil	AAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGADDE
Ga0307475_103726012	3300031754	Hardwood Forest Soil	NNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDND
Ga0307473_100303153	3300031820	Hardwood Forest Soil	MDAHDLLNNLTNGQGFVGNGLNIPPIAAVPATVSLDIEWSGVIDSQRVVNENQNFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPIRNRYSIIAHEQNGVFFHLGDD
Ga0307478_101019364	3300031823	Hardwood Forest Soil	MDAHDLLNNLTNGQGFSGNGLNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPTRNRYSIIAHEQNGVFFHLGADD
Ga0307479_100096239	3300031962	Hardwood Forest Soil	IAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDND
Ga0306922_114686701	3300032001	Soil	LNIPPIAAVPATVSFDIEWSGVIDSQKVVNENHSFRGHFVKTGATINWSAQASEPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDD
Ga0307471_1001296832	3300032180	Hardwood Forest Soil	LNIPPIAAVPATVSFDIEWSGVIDSQKVVNENQSFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDND
Ga0307472_1005828283	3300032205	Hardwood Forest Soil	LNIPPIAAVPATVSLDIEWSGVIDSQRVVNENQNFRGHFVKTGATINWSAQASQPGGFSFVSEAPNPMRNRYSIIAHEQNGVFFHLGDDND
Ga0310810_101276245	3300033412	Soil	MGLNIPPIAPVPATVSFDIEWSGIIDSAKFLNEMQTYRANFVRTGATIEWSAESQGGFAFQSEAPDPARNRYSIIGHEQNGAFFHPDN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097937

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences