Metagenome Family F097947

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097947
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	103 residues
Representative Sequence	MGIWKTIKAAFAPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP
Number of Associated Samples	87
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	40.38 %
% of genes near scaffold ends (potentially truncated)	38.46 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.692 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.038 % of family members)
Environment Ontology (ENVO)	Unclassified (36.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.192 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.14% β-sheet: 10.48% Coil/Unstructured: 52.38%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00072	Response_reg	2.88
PF02796	HTH_7	2.88
PF01641	SelR	1.92
PF03401	TctC	0.96
PF13531	SBP_bac_11	0.96
PF07992	Pyr_redox_2	0.96
PF04392	ABC_sub_bind	0.96
PF02371	Transposase_20	0.96
PF03928	HbpS-like	0.96
PF00816	Histone_HNS	0.96
PF00571	CBS	0.96
PF00115	COX1	0.96
PF11604	CusF_Ec	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	1.92
COG2916	DNA-binding protein H-NS	Transcription [K]	0.96
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.96
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.96
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
All Organisms	root	All Organisms	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
cellular organisms	root	All Organisms → cellular organisms	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.35 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.42 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	4.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.88 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.81 %
Bradyrhizobium sp. CCGUVB23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	2.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.88 %
Bradyrhizobium sp. AS23.2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AS23.2	1.92 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100699011	Not Available	814	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1034548	Not Available	730	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1040301	Not Available	732	Open in IMG/M
3300000956\|JGI10216J12902_100993064	Not Available	1329	Open in IMG/M
3300005186\|Ga0066676_10817147	Not Available	630	Open in IMG/M
3300005467\|Ga0070706_100040169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4318	Open in IMG/M
3300005467\|Ga0070706_100271875	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300005471\|Ga0070698_100828768	Not Available	869	Open in IMG/M
3300005713\|Ga0066905_101014115	Not Available	733	Open in IMG/M
3300005713\|Ga0066905_101230803	Not Available	670	Open in IMG/M
3300005713\|Ga0066905_102161090	Not Available	518	Open in IMG/M
3300005764\|Ga0066903_101386973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1319	Open in IMG/M
3300005764\|Ga0066903_101465644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1286	Open in IMG/M
3300005764\|Ga0066903_102555626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	989	Open in IMG/M
3300005764\|Ga0066903_107271602	Not Available	573	Open in IMG/M
3300006028\|Ga0070717_12064537	Not Available	513	Open in IMG/M
3300006173\|Ga0070716_100051817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2335	Open in IMG/M
3300007255\|Ga0099791_10060726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1702	Open in IMG/M
3300007265\|Ga0099794_10062006	All Organisms → cellular organisms → Bacteria	1817	Open in IMG/M
3300009038\|Ga0099829_10382558	Not Available	1162	Open in IMG/M
3300009090\|Ga0099827_11528136	Not Available	581	Open in IMG/M
3300009147\|Ga0114129_12741909	Not Available	587	Open in IMG/M
3300009147\|Ga0114129_13013934	Not Available	553	Open in IMG/M
3300009792\|Ga0126374_10271620	All Organisms → cellular organisms → Bacteria → Proteobacteria	1120	Open in IMG/M
3300010043\|Ga0126380_10128081	Not Available	1582	Open in IMG/M
3300010046\|Ga0126384_10250452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1431	Open in IMG/M
3300010047\|Ga0126382_10124795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1715	Open in IMG/M
3300010048\|Ga0126373_11385215	Not Available	769	Open in IMG/M
3300010359\|Ga0126376_10084240	Not Available	2374	Open in IMG/M
3300010361\|Ga0126378_10405864	Not Available	1475	Open in IMG/M
3300010362\|Ga0126377_10346219	Not Available	1481	Open in IMG/M
3300010366\|Ga0126379_11516607	Not Available	776	Open in IMG/M
3300010398\|Ga0126383_10048656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3516	Open in IMG/M
3300011271\|Ga0137393_10917479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	747	Open in IMG/M
3300012096\|Ga0137389_10432412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1126	Open in IMG/M
3300012198\|Ga0137364_10194634	All Organisms → cellular organisms → Bacteria → Proteobacteria	1484	Open in IMG/M
3300012198\|Ga0137364_10718826	Not Available	754	Open in IMG/M
3300012201\|Ga0137365_10019941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5219	Open in IMG/M
3300012201\|Ga0137365_10250582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AS23.2	1317	Open in IMG/M
3300012204\|Ga0137374_10101326	All Organisms → cellular organisms → Bacteria	2713	Open in IMG/M
3300012206\|Ga0137380_10273555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1517	Open in IMG/M
3300012208\|Ga0137376_10632804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	925	Open in IMG/M
3300012208\|Ga0137376_11811796	Not Available	501	Open in IMG/M
3300012211\|Ga0137377_11040474	Not Available	749	Open in IMG/M
3300012285\|Ga0137370_10372904	Not Available	861	Open in IMG/M
3300012353\|Ga0137367_10449620	Not Available	910	Open in IMG/M
3300012354\|Ga0137366_10451152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AS23.2	932	Open in IMG/M
3300012356\|Ga0137371_10835825	Not Available	701	Open in IMG/M
3300012361\|Ga0137360_10572819	Not Available	965	Open in IMG/M
3300012363\|Ga0137390_10696515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	978	Open in IMG/M
3300012929\|Ga0137404_10952364	Not Available	784	Open in IMG/M
3300012930\|Ga0137407_11593148	Not Available	622	Open in IMG/M
3300012948\|Ga0126375_11354919	Not Available	601	Open in IMG/M
3300012971\|Ga0126369_11278642	Not Available	824	Open in IMG/M
3300016294\|Ga0182041_10616614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	955	Open in IMG/M
3300016319\|Ga0182033_10759767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300016341\|Ga0182035_10581926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	965	Open in IMG/M
3300016371\|Ga0182034_10288961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1309	Open in IMG/M
3300016387\|Ga0182040_10433047	All Organisms → cellular organisms → Bacteria → Acidobacteria	1039	Open in IMG/M
3300016404\|Ga0182037_10300572	Not Available	1290	Open in IMG/M
3300016445\|Ga0182038_11190454	Not Available	679	Open in IMG/M
3300018468\|Ga0066662_10505027	Not Available	1102	Open in IMG/M
3300019890\|Ga0193728_1177100	Not Available	915	Open in IMG/M
3300021560\|Ga0126371_10134659	Not Available	2514	Open in IMG/M
3300025910\|Ga0207684_10008029	All Organisms → cellular organisms → Bacteria → Proteobacteria	9425	Open in IMG/M
3300025928\|Ga0207700_11744346	Not Available	548	Open in IMG/M
3300025939\|Ga0207665_10204290	Not Available	1441	Open in IMG/M
3300026482\|Ga0257172_1060393	Not Available	695	Open in IMG/M
3300027646\|Ga0209466_1056031	Not Available	796	Open in IMG/M
3300027655\|Ga0209388_1052210	Not Available	1180	Open in IMG/M
3300027874\|Ga0209465_10106334	Not Available	1378	Open in IMG/M
3300027903\|Ga0209488_10127940	All Organisms → cellular organisms → Eukaryota	1914	Open in IMG/M
3300028878\|Ga0307278_10278622	Not Available	741	Open in IMG/M
3300031544\|Ga0318534_10198019	All Organisms → cellular organisms → Bacteria → Proteobacteria	1160	Open in IMG/M
3300031545\|Ga0318541_10053530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2079	Open in IMG/M
3300031549\|Ga0318571_10466972	Not Available	503	Open in IMG/M
3300031573\|Ga0310915_10087233	Not Available	2086	Open in IMG/M
3300031681\|Ga0318572_10057010	Not Available	2119	Open in IMG/M
3300031744\|Ga0306918_10057195	Not Available	2619	Open in IMG/M
3300031744\|Ga0306918_10906565	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300031748\|Ga0318492_10213665	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300031765\|Ga0318554_10547878	Not Available	653	Open in IMG/M
3300031770\|Ga0318521_10810907	Not Available	571	Open in IMG/M
3300031793\|Ga0318548_10114982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1297	Open in IMG/M
3300031793\|Ga0318548_10487533	Not Available	603	Open in IMG/M
3300031819\|Ga0318568_10226084	Not Available	1157	Open in IMG/M
3300031833\|Ga0310917_10322052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1047	Open in IMG/M
3300031835\|Ga0318517_10308524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	715	Open in IMG/M
3300031835\|Ga0318517_10361633	Not Available	656	Open in IMG/M
3300031890\|Ga0306925_11729019	Not Available	602	Open in IMG/M
3300031910\|Ga0306923_10725464	All Organisms → cellular organisms → Bacteria → Acidobacteria	1104	Open in IMG/M
3300031912\|Ga0306921_10386405	Not Available	1634	Open in IMG/M
3300031912\|Ga0306921_10740961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1126	Open in IMG/M
3300031942\|Ga0310916_11203071	Not Available	626	Open in IMG/M
3300031946\|Ga0310910_10193878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1574	Open in IMG/M
3300031946\|Ga0310910_10341638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	1182	Open in IMG/M
3300032001\|Ga0306922_10127792	Not Available	2706	Open in IMG/M
3300032001\|Ga0306922_12132569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300032041\|Ga0318549_10093289	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300032055\|Ga0318575_10414828	Not Available	683	Open in IMG/M
3300032059\|Ga0318533_11407609	Not Available	509	Open in IMG/M
3300032068\|Ga0318553_10448692	Not Available	676	Open in IMG/M
3300032076\|Ga0306924_10954612	All Organisms → cellular organisms → Bacteria → Acidobacteria	944	Open in IMG/M
3300032076\|Ga0306924_11489076	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.08%
Host-Associated	Host-Associated	1.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.08%
Plants	Host-Associated → Plants	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.77%
Loam	Environmental → Terrestrial → Soil → Loam	17.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1006990111	3300000559	Soil	MGIWKTIKAAFASGATTPPDARRLSAVDELALSASLRDLPLGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRK
AP72_2010_repI_A01DRAFT_10345482	3300000579	Forest Soil	MGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP*
AP72_2010_repI_A001DRAFT_10403013	3300000893	Forest Soil	MGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRGYF
JGI10216J12902_1009930642	3300000956	Soil	MEIWKTIKAAFGRGTSTPPDARRLNAVDELALSASLGALADEETGWITLSEARALFGEMDQIGKASLVAFAEEREHRSIPEFMLAQGRVYFTRKAT*
Ga0066676_108171471	3300005186	Soil	MGIWKAIKSAFAPDTSVPPDPRRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMSVEGRVYFTRKAP*
Ga0070706_1000401691	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VLQYKGSVMGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRALPVGEWGWITLSEARALFSWMDDQYTFRETDEQVKVSLAAFAAQSEHRSTFDLMPAEGRVYFTRKAA*
Ga0070706_1002718752	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGIWKAIKSAFAPDTSVPPDPRRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSASDLMSVEGRVYFTRKAP*
Ga0070698_1008287681	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGIWKTIKAAFAPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSASDLMSVEGRVYFTRKAP*
Ga0066905_1010141152	3300005713	Tropical Forest Soil	MGIWKTIKAAFAPGTPTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAERDHRSAFDLMPVEGRVYFTRKAP*
Ga0066905_1012308032	3300005713	Tropical Forest Soil	TPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDLYAFGQMDEVGKMSLAAFAAESDHRSDFDLMPVEGRVYFTRKAP*
Ga0066905_1021610902	3300005713	Tropical Forest Soil	MGIWKTIKAAFAPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDGRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP*
Ga0066903_1013869733	3300005764	Tropical Forest Soil	MGIWKTIKATFGTSTLPEARRLSAVNELALSASIRALAVGERGWITLSEARALFGEMDRVGKASLAAFAGEREHRSTPEFVPAEGRVFFTRKAT*
Ga0066903_1014656442	3300005764	Tropical Forest Soil	MGIWKAIKAAFSPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARGLFSPMDERYAFGEMDEVGKTSLAAFAAEGDHRSAFDLMPFEGRVYFTRKAP*
Ga0066903_1025556262	3300005764	Tropical Forest Soil	MGIWKTIKAAFAPGTSTPPDARRLSAVDELALSVSLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP*
Ga0066903_1072716021	3300005764	Tropical Forest Soil	MGLWEAIKAALGAHTPPDAQKLSAVNEDSLSASIKALSVEERGWITLSEARALFSPMDEQCAFGEMDKVGKRSLAEFAAESEHRSRFDIMPFERRVYFTRKGT*
Ga0070717_120645372	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KGSVMGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRALPVGEWGWITLSEARALFSWMDDQYTFRETDEQVKVSLAAFAAQSEHRSTFDLMPAEGRVYFTRKAA*
Ga0070716_1000518173	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESNHRSAFDLMPVEGRVYFTRKAP*
Ga0099791_100607262	3300007255	Vadose Zone Soil	VLQYKGSVMGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRALPVGEWGWITLSEARALFSWMDDQYTFRETDEQVKASLAAFAAQSEHRSTFNLMPVEGRVYFTRKAA*
Ga0099794_100620062	3300007265	Vadose Zone Soil	MGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRALPVGEWGWITLSEARALFSWMDDQYTFRETDEQVKASLAAFAAQSEHRSTFNLMPVEGRVYFTRKAA*
Ga0099829_103825581	3300009038	Vadose Zone Soil	VLQYKGSVMGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRALPVGEWGWITLSEARALFSWMDDQYTFRETDEQVKASLAAFAAQSEHRSTFNLMPAEGRVYFTRKAA*
Ga0099827_115281361	3300009090	Vadose Zone Soil	YGKPLKYAFAPGTSTPPDARRLSAVDEVALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAVESDHRSAFDLMPVEGRVYFTRKAP*
Ga0114129_127419091	3300009147	Populus Rhizosphere	MGLWKTIKAGFGTSTPPDARRLSAVDELTLSASLRALHVGERGWITLSEARALFSWMDDQYTFREMDEQVKASLAAFAAQNEHRSTFKLMPAEGRVCFTRQVS
Ga0114129_130139341	3300009147	Populus Rhizosphere	MGIWKTVKAVFASGTSTPPDARRLSAVDELALSASLRALTVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLTAFAAESDHRSAFDLMPVEGRVYFTRKAP*
Ga0126374_102716202	3300009792	Tropical Forest Soil	MGIWKTIKAAFATGISTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFTAESDHRSAFDLMPVEGRVYFTRKAP*
Ga0126380_101280813	3300010043	Tropical Forest Soil	MGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDYRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP*
Ga0126384_102504521	3300010046	Tropical Forest Soil	STPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKISLAAFAAESDHRSAFDLMPVEGRVYFTRKAP*
Ga0126382_101247951	3300010047	Tropical Forest Soil	MGIWKTIKAAFATGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP*
Ga0126373_113852151	3300010048	Tropical Forest Soil	MGIWKTIKAAFATGKSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDVMPVEGRVYFTRKAP*
Ga0126376_100842402	3300010359	Tropical Forest Soil	VLQYKGSVMGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDYRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP*
Ga0126378_104058642	3300010361	Tropical Forest Soil	MGIWKAIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP*
Ga0126377_103462193	3300010362	Tropical Forest Soil	MGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDYRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFT
Ga0126379_115166071	3300010366	Tropical Forest Soil	MGIWKTIKAAFAPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAERDHRSAFDLMPVEGRVYFTRKAN*
Ga0126383_100486564	3300010398	Tropical Forest Soil	MGIWKAIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDYRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTPKSTLILFVLIWANGRVSFKIVRMRG*
Ga0137393_109174791	3300011271	Vadose Zone Soil	MWKTIKSLLGSGARDPPDAPRLNAGTEAALSASLRALPVGERGWIPLSEARSLFSRMDDNYAFGEMDEEGKAEIASFAAQIAHRSDFSFMPVEGRVYFTRKAP*
Ga0137389_104324122	3300012096	Vadose Zone Soil	MWKTIKSLLGSGARDPPDAPRLNAGTEAALSASLRALPVGERGWIPLSEARSLFSRMDDKYAFGEMDEEGKAEIASFAAQITHRSDFDFMPVEGRVYFTRKAP*
Ga0137364_101946341	3300012198	Vadose Zone Soil	MEIWKTIKAAFGRGTSTPPDARRLNAVDELALSASLGALADEETGWITLSEARALFGEMDQVGKASLVAFAEEREHRSIPEFMLVEGRVYFTRKAI*
Ga0137364_107188262	3300012198	Vadose Zone Soil	MGIWETIKAAFGGGTSAPPDARRLSAVDELALSASLRVLYVGERGWITLSEARALFSWMDDPYTFRETDEQVKASLAAFAAQREH
Ga0137365_100199415	3300012201	Vadose Zone Soil	MGIWKTIKAAFAPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP*
Ga0137365_102505821	3300012201	Vadose Zone Soil	MRIWETIKAAFGTSTPPDARRLSAVDELALSASIRALVVGERGWITLSEARALFGEIDQVGKASLAAFAAEREHRSIPEFMPAEGRVYFTRKAD*
Ga0137374_101013261	3300012204	Vadose Zone Soil	MGIWKTIKAAFGRGTSTPPDAPRLNAVDELALSASLGALADEETGWITLSEARALFGEMDQVGKASLVAFAEEREHRSIPEFMPAEGRVYFTRKAA*
Ga0137380_102735552	3300012206	Vadose Zone Soil	MGIWKAIKSAFAPGTSVPPDPRRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSVFDLMPIEGRVYFTRKAN*
Ga0137376_106328043	3300012208	Vadose Zone Soil	MGIWKTIKAAFGRGTSTPPDARRLNAVDELALSASLRTLHAGERGWITLSEARDLFSTMDDKYAFGEMDEQGKASLAAFAAQSEHRSTVDLRPVEGRVYFTRKA
Ga0137376_118117961	3300012208	Vadose Zone Soil	IWKTIKAAFGRGTSTPPDARRLNAVDELALSASLGALADEETGWITLSEARALFGEMDQVGKASLVAFAEEREHRSIPEFMLVEGRVYFTRKAI*
Ga0137377_110404741	3300012211	Vadose Zone Soil	MGIWKTIKAAFGTSVPPDARRLSAVDELALSASLRALHVGERGWITLAEARALFSPMDDQYSFGEMDQMGRMRLAAFAAEGDHRSDFDLMPVEGRVYFTRKAT*
Ga0137370_103729041	3300012285	Vadose Zone Soil	MGIWKTIKAAFAPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARDLFSTMDDKYAFGEMDEQGKASLAAFAAQSEHRSTVDLRPVEGRVYFTRKAP*
Ga0137367_104496201	3300012353	Vadose Zone Soil	MGIWKTIKAAFAPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMPIEGRVYFTRKAN*
Ga0137366_104511521	3300012354	Vadose Zone Soil	PPDARRLSAVDELALSASIRALVVGERGWITLSEARALFGEIDQVGKASLAAFAAEREHRSIPEFMPAEGRVYFTRKAD*
Ga0137371_108358251	3300012356	Vadose Zone Soil	MGITIKAAFGRGTSTPPDARRLNAVDELALSASLGALADEETGWITLSEALALFGEMDQVGKATLVAFAEEREHRSIPEFMLAEGRVYFTRKAA*
Ga0137360_105728191	3300012361	Vadose Zone Soil	MGIWKTIKAAFGRGTSTPTDARRLSTVDELALSASLRALPVGERGWITLSDSRALFSWMDDQYTFRETDEQVKASLAAFAAQSEHRSTFNLMPAEGRVYFTRKAA*
Ga0137390_106965152	3300012363	Vadose Zone Soil	KTIKSLLGSGARGPPDARRLDAGTEAALSASLGALPVGERGWIPLSEARSLFSRMDDKYAFGEMDEEGKAEIASFAAQITHRSDFDFMPVEGRVYFTRKAP*
Ga0137404_109523642	3300012929	Vadose Zone Soil	MGIWKTIKAAFGRGTSTPPDARRLSGVDELALSASLRALPVGERGWITLSEARALFSWMDDQYTFRETDEQVKASLAAFAAQSEHRSTFNLMPSEGRVYFTRK
Ga0137407_115931481	3300012930	Vadose Zone Soil	MGIWETIKAALGRGTSAPPDARRLRAVDELALSASIRALPVGERGWITLSEARALFGEIDQVGKASLVAFAAEREHRSIPEFMPVEGRVYFTRKAT*
Ga0126375_113549192	3300012948	Tropical Forest Soil	MGIWKTIKAAFASGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEAHALFSPMDYRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMPVEGRVYFTRKA
Ga0126369_112786421	3300012971	Tropical Forest Soil	KAAFSPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP*
Ga0182041_106166142	3300016294	Soil	MGIWKTIKAAFATGISTPPDARRLSAVDELALSASLRGLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMLMPVEGRVYFTRKAP
Ga0182033_107597672	3300016319	Soil	MGIWKTIKAAFATGTSTPPDARRLSAVEELALSASLKDLPGGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAEGDHRSAFDLMPVEGRVYFTR
Ga0182035_105819263	3300016341	Soil	VGLWTIIKAAFGTHTPPDARRLSAVNEDSLSASIKALSVGERGWITLSEARALFSPTDDEYAFDEMDTVGRTSLAKFAAESEHRSRLDIMPVERRVYFTRKG
Ga0182034_102889612	3300016371	Soil	MGIWKTIKAAFATGISTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMLMPVEGRVYFTRKAP
Ga0182040_104330472	3300016387	Soil	MGIWKTIKAAFATGTSTPPDARRLSAVEELALSASLKDLPGGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAEGDHRSAFDLMPVEGRVYLTRKAP
Ga0182037_103005722	3300016404	Soil	VLQYKGSVMGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDYRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP
Ga0182038_111904541	3300016445	Soil	STPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDYRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP
Ga0066662_105050271	3300018468	Grasslands Soil	MGIWKAIKSAFAPDTSVPPDPRRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMSVEGRVYFTRKAP
Ga0193728_11771002	3300019890	Soil	MDLWKTIKSLFAYGGSAPPDAARLKAGNESELSTSLRALPHRERGWITLSEARYLFSRMDDQYAFGDMDDLGKSNLGAFAAQSEHRSSVDIMPVEGRVYFTRKIRT
Ga0126371_101346592	3300021560	Tropical Forest Soil	MGIWKAIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDYRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP
Ga0207684_100080294	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VLQYKGSVMGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRALPVGEWGWITLSEARALFSWMDDQYTFRETDEQVKVSLAAFAAQSEHRSTFDLMPAEGRVYFTRKAA
Ga0207700_117443463	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMSVEGRVYFTRKA
Ga0207665_102042903	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESNHRSAFDLMPVEGRVYFTRKAP
Ga0257172_10603931	3300026482	Soil	LQYKGSVMGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRALPVGEWGWITLSEARALFSWMDDQYTFRETDEQVKASLAAFAAQSEHRSTFNLMPVEGRVYFTRKAA
Ga0209466_10560312	3300027646	Tropical Forest Soil	MGIWKTIKAAFATGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP
Ga0209388_10522102	3300027655	Vadose Zone Soil	MGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRALPVGEWGWITLSEARALFSWMDDQYTFRETDEQVKASLAAFAAQSEHRSTFNLMPVEGRVYFTRKAA
Ga0209465_101063341	3300027874	Tropical Forest Soil	MGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDYRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP
Ga0209488_101279402	3300027903	Vadose Zone Soil	DIGRSRSDQPKRSVMGIWKALKAAFAPGISVPPDARRLSAVDEVALSASLRALPVGERGWITLSEARALFSPMNDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMPIEGRVYFTRKAA
Ga0307278_102786221	3300028878	Soil	MGIWKTIKAAFGRGTSTQPDARRLSAVDELALSASIRALVVGERGWITLSEARALFGEIDQVGKASLAAFAAEREHRSIPEFMPAEGRVYFTRKAD
Ga0318534_101980192	3300031544	Soil	MRIWKTIKPAFAPGTSTPPDARRLSAVDELALSASLRALPVGKRGWTTLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAERDHRSAFDLMPVEGRVYFTRKAP
Ga0318541_100535303	3300031545	Soil	MGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP
Ga0318571_104669721	3300031549	Soil	LAVLRLITSSNLVGCITGRSAEFSPRWRVTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMPVEGRVYFTRRAP
Ga0310915_100872333	3300031573	Soil	MGIWKTIKAAFATGISTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP
Ga0318572_100570104	3300031681	Soil	MGIWKTIKAAFAPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMPIEGRVYFTRKAN
Ga0306918_100571954	3300031744	Soil	VLQYKSSVMGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDYRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP
Ga0306918_109065651	3300031744	Soil	MGIWKTIKAAFATGISTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVERRMVG
Ga0318492_102136651	3300031748	Soil	MGIWKTIKAAFATGISTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDYRYAFGEMDEVGKMSLAAFAAERDHRSAFDLMPVEGRVYFTR
Ga0318554_105478782	3300031765	Soil	MGIWKTIKAAFATGISTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYLTRKAP
Ga0318521_108109071	3300031770	Soil	PDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDYRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP
Ga0318548_101149823	3300031793	Soil	IKPAFAPGTSTPPDARRLSAVDELALSASLRALPVGKRGWTTLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAERDHRSAFDLMPVEGRVYFTRKAP
Ga0318548_104875331	3300031793	Soil	MGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAEGDHRSAFDLMPVEGRVYFTRKAP
Ga0318568_102260843	3300031819	Soil	RSVMGIWKTIKAAFAPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMPIEGRVYFTRKAN
Ga0310917_103220522	3300031833	Soil	RAVMRIWKTIKPAFAPGTSTPPDARRLSAVDELALSASLRALPVGKRGWTTLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAERDHRSAFDLMPVEGRVYFTRKAP
Ga0318517_103085242	3300031835	Soil	VGLWTIIKAAFGTHTPPDARRLSAVNEDSLSASIKALSVGERGWITLSEARALFSPTDDEYAFDEMDTVGRTSLAKFAAESEHRSRLDIM
Ga0318517_103616332	3300031835	Soil	MGIWKTIKETFGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMPIEGRVYFTRKAN
Ga0306925_117290191	3300031890	Soil	MGIWKTIKAAFATGISTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFT
Ga0306923_107254643	3300031910	Soil	MGIWKTIKAAFATGTSTPPDARRLSAVEELALSASLKDLPGGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAEGDHRSAFDLMPVEGRVYFTRKAP
Ga0306921_103864051	3300031912	Soil	AFAPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMPIEGRVYFTRKAN
Ga0306921_107409612	3300031912	Soil	MGIWKTIKAAFATGTSTPPDARRLSAVEELALSASLKDLPGGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP
Ga0310916_112030711	3300031942	Soil	MGIWKTIKAAFATGISTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLM
Ga0310910_101938782	3300031946	Soil	MRIWKTIKPAFAPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAERDHRSAFDLMPVEGRVYFTRKAP
Ga0310910_103416381	3300031946	Soil	VGLWTIIKAAFGTHTPPDARRLSAVNEDSLSASIKALSVGERGWITLSEARALFSPTDDEYAFDEMDTVGRTSLAKFAAESEHRSRLDIMPVERRVYFT
Ga0306922_101277924	3300032001	Soil	VLQYKSSVMGIWKTIKAAFGRGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP
Ga0306922_121325691	3300032001	Soil	KAAFAPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDGRYAFGEMDEVGKTSLAAFAAESDHRSAVDLMPVEGRVYFTRKAP
Ga0318549_100932892	3300032041	Soil	MGIWKTIKAAFATGISTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESNHRS
Ga0318575_104148281	3300032055	Soil	GIWKTIKAAFAPGTSTPPDARRLSAVDELALSASLRALPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKTSLAAFAAESDHRSAFDLMPIEGRVYFTRKAN
Ga0318533_114076091	3300032059	Soil	MQRSLMGIWKTIKAAFATGTSTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRKAP
Ga0318553_104486921	3300032068	Soil	MGIWKTIKAAFATGISTPPDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDGYAFGEMDEVGKMSLAAFAAESDHRSAFDLMLMPVEGRVYFTRKAP
Ga0306924_109546122	3300032076	Soil	PDARRLSAVDELALSASLRDLPVGERGWITLSEARALFSPMDDRYAFGEMDEVGKMSLAAFAAEGDHRSAFDLMPVEGRVYFTRKAP
Ga0306924_114890761	3300032076	Soil	MGIWKTIKAAFATGISTPPDARRLSAVDELALSASLRGLPVGERGWITLSEARALFSPMDDGYAFGEMDEVGKMSLAAFAAESDHRSAFDLMPVEGRVYFTRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097947

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences