Metagenome / Metatranscriptome Family F097950

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097950
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	66 residues
Representative Sequence	MKRKAAEGLAAAHRMSSAANEEFTAMANGLDRVARPQSGWDPYEVWRTRVKVSSSVMPERERDPLH
Number of Associated Samples	72
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.31 %
% of genes near scaffold ends (potentially truncated)	16.35 %
% of genes from short scaffolds (< 2000 bps)	69.23 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.615 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (40.385 % of family members)
Environment Ontology (ENVO)	Unclassified (35.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.615 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.94% β-sheet: 0.00% Coil/Unstructured: 51.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04262	Glu_cys_ligase	16.35
PF00990	GGDEF	8.65
PF00005	ABC_tran	8.65
PF02518	HATPase_c	6.73
PF09912	DUF2141	5.77
PF01061	ABC2_membrane	1.92
PF00487	FA_desaturase	0.96
PF11752	DUF3309	0.96
PF06127	Mpo1-like	0.96
PF00593	TonB_dep_Rec	0.96
PF04055	Radical_SAM	0.96
PF01048	PNP_UDP_1	0.96
PF07676	PD40	0.96
PF01610	DDE_Tnp_ISL3	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2918	Gamma-glutamylcysteine synthetase	Coenzyme transport and metabolism [H]	16.35
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.96
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.96
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.96
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.96
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.96
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.96
COG4539	2-hydroxy fatty acid dioxygenase MPO1 (alpha-oxidation of fatty acids)	Lipid transport and metabolism [I]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.81 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	66.35 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	48.08 %
Unclassified	root	N/A	15.38 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.88 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	48.08 %
Unclassified	root	N/A	15.38 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	2.88 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	48.08 %
Unclassified	root	N/A	15.38 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2.88 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	48.08 %
Unclassified	root	N/A	15.38 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001182\|JGI12668J13544_1002311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1081	Open in IMG/M
3300001593\|JGI12635J15846_10065131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2717	Open in IMG/M
3300001593\|JGI12635J15846_10092543	All Organisms → cellular organisms → Bacteria	2185	Open in IMG/M
3300001593\|JGI12635J15846_10116830	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300001593\|JGI12635J15846_10285257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1041	Open in IMG/M
3300001661\|JGI12053J15887_10000319	All Organisms → cellular organisms → Bacteria → Proteobacteria	18897	Open in IMG/M
3300001661\|JGI12053J15887_10066906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1992	Open in IMG/M
3300001661\|JGI12053J15887_10144627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1253	Open in IMG/M
3300002245\|JGIcombinedJ26739_100034415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4516	Open in IMG/M
3300002245\|JGIcombinedJ26739_100746671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	858	Open in IMG/M
3300002245\|JGIcombinedJ26739_100865379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	785	Open in IMG/M
3300004135\|Ga0058884_1287425	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300004139\|Ga0058897_10862257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	541	Open in IMG/M
3300006173\|Ga0070716_100035169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2753	Open in IMG/M
3300006176\|Ga0070765_100760945	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
3300006354\|Ga0075021_10646569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	677	Open in IMG/M
3300009090\|Ga0099827_11197266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	660	Open in IMG/M
3300011120\|Ga0150983_14199700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1071	Open in IMG/M
3300012202\|Ga0137363_11070456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	685	Open in IMG/M
3300012203\|Ga0137399_10099808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2243	Open in IMG/M
3300012203\|Ga0137399_10165958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1774	Open in IMG/M
3300012203\|Ga0137399_10845571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	770	Open in IMG/M
3300012205\|Ga0137362_10472882	Not Available	1084	Open in IMG/M
3300012205\|Ga0137362_10785062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	816	Open in IMG/M
3300012361\|Ga0137360_11431312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	595	Open in IMG/M
3300012582\|Ga0137358_10240651	Not Available	1232	Open in IMG/M
3300012685\|Ga0137397_10102677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2096	Open in IMG/M
3300012918\|Ga0137396_10442431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	964	Open in IMG/M
3300012922\|Ga0137394_10007384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8487	Open in IMG/M
3300012925\|Ga0137419_10358605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1130	Open in IMG/M
3300012925\|Ga0137419_10498211	Not Available	967	Open in IMG/M
3300012925\|Ga0137419_10603167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	882	Open in IMG/M
3300012927\|Ga0137416_10088253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2301	Open in IMG/M
3300012929\|Ga0137404_10635429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	962	Open in IMG/M
3300019866\|Ga0193756_1000761	All Organisms → cellular organisms → Bacteria → Proteobacteria	2836	Open in IMG/M
3300019866\|Ga0193756_1001140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2551	Open in IMG/M
3300020022\|Ga0193733_1000822	All Organisms → cellular organisms → Bacteria → Proteobacteria	9796	Open in IMG/M
3300020022\|Ga0193733_1011659	All Organisms → cellular organisms → Bacteria → Proteobacteria	2482	Open in IMG/M
3300020022\|Ga0193733_1078183	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300020170\|Ga0179594_10089586	Not Available	1094	Open in IMG/M
3300020170\|Ga0179594_10127635	Not Available	930	Open in IMG/M
3300020199\|Ga0179592_10055501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1804	Open in IMG/M
3300020579\|Ga0210407_10091195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2306	Open in IMG/M
3300020579\|Ga0210407_10105340	All Organisms → cellular organisms → Bacteria → Proteobacteria	2146	Open in IMG/M
3300020581\|Ga0210399_10452764	Not Available	1069	Open in IMG/M
3300021086\|Ga0179596_10186513	Not Available	1004	Open in IMG/M
3300021088\|Ga0210404_10906014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	504	Open in IMG/M
3300021171\|Ga0210405_10439091	All Organisms → cellular organisms → Bacteria → Proteobacteria	1026	Open in IMG/M
3300021178\|Ga0210408_10263205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1374	Open in IMG/M
3300021178\|Ga0210408_10374965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1134	Open in IMG/M
3300021420\|Ga0210394_10000498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	81715	Open in IMG/M
3300021420\|Ga0210394_10001384	All Organisms → cellular organisms → Bacteria → Proteobacteria	39347	Open in IMG/M
3300021432\|Ga0210384_10300118	Not Available	1446	Open in IMG/M
3300021432\|Ga0210384_11181834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	669	Open in IMG/M
3300021559\|Ga0210409_10091112	All Organisms → cellular organisms → Bacteria → Proteobacteria	2815	Open in IMG/M
3300021559\|Ga0210409_11429288	Not Available	567	Open in IMG/M
3300022531\|Ga0242660_1080760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	765	Open in IMG/M
3300024330\|Ga0137417_1264226	Not Available	1994	Open in IMG/M
3300025939\|Ga0207665_10732753	All Organisms → cellular organisms → Bacteria → Proteobacteria	778	Open in IMG/M
3300026359\|Ga0257163_1043576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	713	Open in IMG/M
3300026551\|Ga0209648_10074780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2842	Open in IMG/M
3300026920\|Ga0208575_1023716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	549	Open in IMG/M
3300027383\|Ga0209213_1009033	Not Available	1789	Open in IMG/M
3300027383\|Ga0209213_1009119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1782	Open in IMG/M
3300027480\|Ga0208993_1093222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	551	Open in IMG/M
3300027535\|Ga0209734_1000522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	5656	Open in IMG/M
3300027537\|Ga0209419_1000579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3870	Open in IMG/M
3300027546\|Ga0208984_1015873	Not Available	1488	Open in IMG/M
3300027565\|Ga0209219_1002341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3682	Open in IMG/M
3300027583\|Ga0209527_1084462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	713	Open in IMG/M
3300027587\|Ga0209220_1019954	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300027591\|Ga0209733_1001218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	5636	Open in IMG/M
3300027591\|Ga0209733_1008379	All Organisms → cellular organisms → Bacteria	2696	Open in IMG/M
3300027591\|Ga0209733_1042400	Not Available	1215	Open in IMG/M
3300027591\|Ga0209733_1124492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	639	Open in IMG/M
3300027605\|Ga0209329_1076763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	724	Open in IMG/M
3300027616\|Ga0209106_1027403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1252	Open in IMG/M
3300027633\|Ga0208988_1089897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	766	Open in IMG/M
3300027635\|Ga0209625_1005740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2693	Open in IMG/M
3300027635\|Ga0209625_1100199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	650	Open in IMG/M
3300027645\|Ga0209117_1032940	All Organisms → cellular organisms → Bacteria → Proteobacteria	1607	Open in IMG/M
3300027645\|Ga0209117_1041420	Not Available	1397	Open in IMG/M
3300027655\|Ga0209388_1095977	Not Available	851	Open in IMG/M
3300027663\|Ga0208990_1041884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1406	Open in IMG/M
3300027669\|Ga0208981_1062790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	946	Open in IMG/M
3300027669\|Ga0208981_1069127	Not Available	900	Open in IMG/M
3300027674\|Ga0209118_1002138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8659	Open in IMG/M
3300027678\|Ga0209011_1002122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7032	Open in IMG/M
3300027678\|Ga0209011_1008438	All Organisms → cellular organisms → Bacteria → Proteobacteria	3487	Open in IMG/M
3300027727\|Ga0209328_10042737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1393	Open in IMG/M
3300028047\|Ga0209526_10706738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	634	Open in IMG/M
3300028792\|Ga0307504_10008120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2288	Open in IMG/M
3300029636\|Ga0222749_10065941	All Organisms → cellular organisms → Bacteria → Proteobacteria	1633	Open in IMG/M
3300030991\|Ga0073994_12075874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	674	Open in IMG/M
3300030998\|Ga0073996_12285235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	599	Open in IMG/M
3300031023\|Ga0073998_10776584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	541	Open in IMG/M
3300031720\|Ga0307469_10022740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3451	Open in IMG/M
3300031720\|Ga0307469_10023511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3413	Open in IMG/M
3300031820\|Ga0307473_10751245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	690	Open in IMG/M
3300031820\|Ga0307473_11266858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	550	Open in IMG/M
3300032174\|Ga0307470_10969023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	674	Open in IMG/M
3300032180\|Ga0307471_100049179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3462	Open in IMG/M
3300032180\|Ga0307471_103735362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	538	Open in IMG/M
3300032205\|Ga0307472_100114368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1891	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.04%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.04%
Sediment	Environmental → Aquatic → Sediment	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.81%
Loam	Environmental → Terrestrial → Soil → Loam	44.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	42.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	40.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001182	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004135	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026920	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12668J13544_10023112	3300001182	Forest Soil	MEGRRGMDKQERRKMKRKAAGVAAAHRTSPAANEEFTAMKNGVDGVARPQPAWDPYEVWRTRVKASSSVMSERERDPLH*
JGI12635J15846_100651311	3300001593	Forest Soil	MKRKAAGGLAAAHRMSPAANEEFTAMVNGLDRVARPQSGWDPYEVWRTRVKASS
JGI12635J15846_100925432	3300001593	Forest Soil	VTTQGAAGLAAVYRTSPEAKEEFTGMVNGLDRLARPQSGWDPYEVWRTRVKVSPGVMQEHEREPLR*
JGI12635J15846_101168303	3300001593	Forest Soil	VKTQGAAGLIAEYRWSPAAKEEFTGMVNGPDRLARPQSGWDPYEVWRTRVKMSSGVMQEREREPLR*
JGI12635J15846_102852571	3300001593	Forest Soil	MKRKAEGLAAAHRMSPAANEEFTAMANGLDRVARPQSGWNPYEVWRTRVKASSSVMPERERDPLR*
JGI12053J15887_1000031916	3300001661	Forest Soil	MKRRTADGLAAAHEMSPAANEEFTAVANGLDGVAGPRGWDPYEVWRTRVKESASVMPEPERDPLH*
JGI12053J15887_100669062	3300001661	Forest Soil	MKRKAAEGLAAAHRMSSAANEEFTAMANGLDKVARPQSGWDPYEVWRTRVKVSASVMPERERDPLH*
JGI12053J15887_101446272	3300001661	Forest Soil	MKRRTADGLAAAHRMPPAANEEFTPMANALDWVARVHLSWDPYEVWRTRVKKSSAVMPERERDPVH*
JGIcombinedJ26739_1000344152	3300002245	Forest Soil	MKRKAAGVAAAHRTSPAANEEFTAMKNGVDGVARPQPAWDPYEVWRTRVKASSSVMSERERDPLH*
JGIcombinedJ26739_1007466712	3300002245	Forest Soil	MKRRTADGLAAAHRIPPAANEEFTARANALDWVARVHLSWDPYEVWRTRVKESSGAMPEREPNPLH*
JGIcombinedJ26739_1008653792	3300002245	Forest Soil	MKRKAAEGLAAAHPMSTAANEEFTAMANGRERVARTQLGWDPYEVWRTRVKPSSSVMPEHERDPLQ*
Ga0058884_12874252	3300004135	Forest Soil	VTTRGAAGLAAVYRTSPEAKEEFTGMVNGLNRVARPLSGWDPYEVWRTRVKVSPGAMQEQEREPLR*
Ga0058897_108622571	3300004139	Forest Soil	VTTQGAAGLAAVYRTSPEAKEEFNGMVNGLDRLARPLSGWDPYEVWRTRVKVSPGVMQEHEREPLR*
Ga0070716_1000351692	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKRKAAEGLAAAHRMSAAANEEFTAMTNGLDRVARPQTGWDPYEVWRTRVKASSNVMPERERDPLA*
Ga0070765_1007609452	3300006176	Soil	MERKGAEGLAAVSRMSPAAKEEFTAMVNGGDRLANPHSGWDPYEVWRTRVKGASTVLQEREPDPLRQRMSLVPKA*
Ga0075021_106465692	3300006354	Watersheds	MERKAAEGLAAVHWMAPAANEEFTGMGDGLARLARTQSGWDPYEVWRTRVKVSSSVEQGRERDPLP*
Ga0099827_111972662	3300009090	Vadose Zone Soil	MKRKAAEGLAAAHRMSPAANDEFTAMANGLDRVARPQSGWDPYEVWRTRVKVSSSVMPERERDPLH*
Ga0150983_141997002	3300011120	Forest Soil	MKRKAAEGLAAARPMSPAANEEFTAMANGLDRVARAQSGWDPYEVWLTRVKASSSVMPERERDPLQ*
Ga0137363_110704561	3300012202	Vadose Zone Soil	MKRKAAEGLAAAHRMSSAANEEFTAMTNGLDRVAHPQSGWDPYEVWRTRVKVSSNVMPERERDPLL*
Ga0137399_100998082	3300012203	Vadose Zone Soil	MKRKAADGLAAAHAMSPAANEEFTEMVDGLDRLASPQSGWDPYEVWRTRVKASSSVMQEHERDPLH*
Ga0137399_101659582	3300012203	Vadose Zone Soil	MKRKAAEGLAAAHRMSSAANEEFTAMANGLDRVARPQSGWDPYEVWRTRVKASSSVMPERERDPLH*
Ga0137399_108455711	3300012203	Vadose Zone Soil	MKRKTAEGLAAAHRISPAANEEFTGMADGVDWVARRQSGWDPYEVWRTRVKVSSGVLQEHERDPLY*
Ga0137362_104728822	3300012205	Vadose Zone Soil	MKRKAAEGLAAAHRMSAAANEEFTAMTNGLDSVARPQSGWDPYEVWRTRVKVSSNVIPERERDPLL*
Ga0137362_107850622	3300012205	Vadose Zone Soil	MKRKAAEGLAAAHRTSPAANDEFTAMANGLDRVARPQSGWDPYEVWRTRVKVSSSVMPERERDPLH*
Ga0137360_114313121	3300012361	Vadose Zone Soil	MKRKAAEGLAAAHRMSAAANEEFTAMTNGLDSVARPQSGWDPYEVWRTRVKVSSSVIPERERDPLH*
Ga0137358_102406512	3300012582	Vadose Zone Soil	MKRKAAEVLAAAHRMSSAANEEFTAMANGLDRVARPQSGWDPYEVWRTRVKASSSVMPERELDPLH*
Ga0137397_101026772	3300012685	Vadose Zone Soil	MKRKAAEGLAAAHRMSAAANEEFTAMANGLDRVARPQSGWDPYEVWRTRVKASSSVMPERERDPLH*
Ga0137396_104424312	3300012918	Vadose Zone Soil	MKRKAAEGLAAAHRMSAAANEEFTAMANGLDAVASPQSGWDPYEVWRTRVKASSSVMPERERDPLH*
Ga0137394_100073847	3300012922	Vadose Zone Soil	MKRKAAEGLAAAHRMSSAANEEFTAMANGLDRVARPQSGWDPYEVWRTRVKVSASVMPERERDPLH*
Ga0137419_103586052	3300012925	Vadose Zone Soil	MKRKAADGLAAAHGMSPAANEEFTEMVDGLDRLASPQSGWDPYEVWRTRVKASSSVMQEHERDPLH*
Ga0137419_104982111	3300012925	Vadose Zone Soil	MKRKAAEGLAAAHRMSPAANEEFTAMANGLDAVASPQSGWDPYEVWRTRVKASSSVMPERERDPLH*
Ga0137419_106031671	3300012925	Vadose Zone Soil	MKRRTADGLAAAHQMSPAANEEFTAVANGLDGVADPRGWDPYEVWRTRVKESASVMPEPEGDPLH*
Ga0137416_100882532	3300012927	Vadose Zone Soil	MKRKAADGLAAAHGLSPAANEEFTEMVDGLDRLASPQSGWDPYEVWRTRVKASSSVMQEHERDPLH*
Ga0137404_106354292	3300012929	Vadose Zone Soil	MKRKAAEGLAAAHRMSSAANEEFTAMANGLDRVARPQSGWDPYEVWRTRVKVSSSVMPERERDPLH*
Ga0193756_10007613	3300019866	Soil	VKTQGAAGLAAVYRTSPAAKEEFTGRVNGLDRPARPQSGWDPYEVWWTRVKVSSGVMQKREREPLR
Ga0193756_10011402	3300019866	Soil	MKRKAAEGLAAAHRMSPAANEEYTAMANGLDRVARPQSGWDPYEVWRTRVKVSSSVMPERERDPLH
Ga0193733_100082211	3300020022	Soil	MKRKAAEGLAAAHRMSPAANEEYSAMANGLDRVARPQSGWDPYEVWRTRVKVSSSVMPERERDPLH
Ga0193733_10116592	3300020022	Soil	VKTQGAAALATVYRESPAAKEEFTGMVNGLDRLARPQSGWDPYEVWRTRVKVSSGVMQEREREPLR
Ga0193733_10781832	3300020022	Soil	MKQNGAEGLAAEEFTGMANDLDRLARPQSGWDPYEVWRTRVKAASSAMQERNAGAQCRSANSTRYASG
Ga0179594_100895862	3300020170	Vadose Zone Soil	MKRKAAEGLAAAHRMSPAANDEFTAMANGLDRVARPQSGWDPYEVWRTRVKVSSSVMPERERDPLH
Ga0179594_101276352	3300020170	Vadose Zone Soil	MKRKAAEGLAAAHRMSAAANEEFTAMTNGLDSVARPQSGWDPYEVWRTRVKVSSNVIPERERDPLL
Ga0179592_100555012	3300020199	Vadose Zone Soil	MKRKAAEGLAAAHRMSAAANEEFTAMANGLDRVARPQSGWDPYEVWRTRVKASSSVMPERERDPLH
Ga0210407_100911952	3300020579	Soil	MKRKAAEGLAAAHRMSAAANEEFTAMANGLERVARAQLGWDPYEVWRTRVKPSSSVMPEHERDPLQ
Ga0210407_101053401	3300020579	Soil	VTTQGAAGLAAVYRTSPEAKEEFTGMVNGLDRLARPLSGWDPYEVWRTRVKVSPGVMQEHEREPLR
Ga0210399_104527641	3300020581	Soil	MKRKAAEGLAADHRMPPAANEEYTAMANGLDGAARARSGWDPYEVWRTRVKESSAVM
Ga0179596_101865132	3300021086	Vadose Zone Soil	MKRKAAEGLAAAHRMSSAANEEFTAMTNGLDRVAHPQSGWDPYEVWRTRVKVSSNVMPERERDPLL
Ga0210404_109060142	3300021088	Soil	MKRKAAEGLAADHRMPPAANEEYTAMANGLDGAARARSGWDPYEVWRTRVKESSAV
Ga0210405_104390912	3300021171	Soil	VTTQGAAGLAAVYRTSPEAKEEFTGMVNGLNRVARPLSGWDPYEVWRTRVKVSPGAMQEHEREPLR
Ga0210408_102632052	3300021178	Soil	MKRKAAEGLAAAHPMSAAANEEFTAMANGLERVARTQLGWDPYEVWRTRVKPSSSVMPEHERDPLQ
Ga0210408_103749652	3300021178	Soil	HRMPPAANEEYTATANGLDGAARARSGWDPYEVWRTRVKESSPVMEEHEPNPLQ
Ga0210394_1000049833	3300021420	Soil	MKRKAAEGLAAARPMSPAANEEFTAMANGLDRVARAQSGWDPYEVWLTRVKASSSVMPERERDPLQ
Ga0210394_1000138434	3300021420	Soil	VTTQGAAGLAAVYRTSPEAKEEFNGMVNGLDGPARPLSGWDPYEVWRTRVKVSPGVMQEHEREPLR
Ga0210384_103001182	3300021432	Soil	MKRKAAEGLAADHRMPPAANEEYTAMANGLDGAARARSGWDPYEVWRTRVKESSAVMEEHEPNPLQ
Ga0210384_111818342	3300021432	Soil	MDKQERRKMKRKAAGVAAAHRTSPAANEEFTAMKNGVDGVARPQPAWDPYEVWRTRVKASSSVMSERERDPLH
Ga0210409_100911122	3300021559	Soil	VTTQGAAGLAAVYRTSPEAKEEFNGMVNGLDRLARPLSGWDPYEVWRTRVKVSPGVMQEHEREPLR
Ga0210409_114292882	3300021559	Soil	GAAGLAAVYRTSPEAKEEFNGMVNGLDGPARPLSGWDPYEVWRTRVKVSPGVMQEHEREPLR
Ga0242660_10807602	3300022531	Soil	MKRKAAEGLAAARPMSPAANEEFTAMANGLERVARAQLGWDPYEVWRTRVKPSSSVMPEHERDPLQ
Ga0137417_12642262	3300024330	Vadose Zone Soil	MKRKAAEGLAVAHRMSSAANEEFTAMANGLDGVASPQSGWDPYEVWRTRVKASSSVMPERERDPLH
Ga0207665_107327531	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKRKAAEGLAAAHRMSAAANEEFTAMTNGLDRVARPQTGWDPYEVWRTRVKASSNVMPERERDPLA
Ga0257163_10435762	3300026359	Soil	MKRKAAEGLAAAHRMSSAANEEFTAMANGLDRVARPQSGWDPYEVWRTRVKASSSVMPERERDPLH
Ga0209648_100747802	3300026551	Grasslands Soil	MKRKAAEGLAVARGMSPAANEEFTEMVAGLDWLARPRAGWDPYEVWRTRVKVSSSVMHERDPLH
Ga0208575_10237161	3300026920	Soil	VKAQAAAGLAAVYRKLRAAKEEFTGMANGLDTLARPKSGWDPYEVWRTRVKVSSGVLQEHERDPLY
Ga0209213_10090332	3300027383	Forest Soil	MKRRTADGLAAAHEMSPAANEEFTAVANGLDGVAGPRGWDPYEVWRTRVKESASVMPEPERDP
Ga0209213_10091192	3300027383	Forest Soil	MKRKAAEGLAAAHRMSSAANEEFTAMANGLDKVADPQSGWDPYEVWRTRVKASSSVMPERERDPVH
Ga0208993_10932222	3300027480	Forest Soil	MKRRTADGLAAAHEMLPAANEEFTAVANGLDGVAGPRGWDPYEVWRTRVKESASVMPEPERDPLH
Ga0209734_10005222	3300027535	Forest Soil	MKRKAEGLAAAHRMSPAANEEFTAMANGLDRVARPQSGWDPYEVWRTRVKASSSVMSEREREPLR
Ga0209419_10005793	3300027537	Forest Soil	MEGRRGMDKQERRKMKRKAAGVAAAHRTSPAANEEFTAMKNGVDGVARPQPAWDPYEVWRTRVKASSSVMSERERDPLH
Ga0208984_10158731	3300027546	Forest Soil	MKRRTADGLAAAHEMSPAANEEFTAVANGLDGVAGPRGWDPYEVWRTRVKESASVMPEPERDPLH
Ga0209219_10023411	3300027565	Forest Soil	MKRKAEGLAAAHRMSPAANEEFTAMANGLDRVARPQSGWNPYEVWRTRVKASSSVMPERERDPLR
Ga0209527_10844621	3300027583	Forest Soil	MKRRTADGLAAAHRIPPAANEEFTARANALDWVARVHLSWDPYEVWRTRVKESSGAMPEREPNPLH
Ga0209220_10199541	3300027587	Forest Soil	VKTQGAAGLIAEYRWSPAAKEEFTGMVNGPDRLARPQSGWDPYEVWRTRVKMSSGVMQEREREPLR
Ga0209733_10012185	3300027591	Forest Soil	MKRKAAQGLAAARRMPRAANEEFTAMANALDSVARAQSGWDPYEVWRTRVKESSSVMQKRERERDPLR
Ga0209733_10083792	3300027591	Forest Soil	MKRKGAAGRDAFYRNSPAANEPFTGMVNGLDRPARPQSGWDPYEVWRTRVKGAFTLMQERELDPLR
Ga0209733_10424003	3300027591	Forest Soil	VTTQGAAGLAAVYRTSPEAKEEFTGMVNGLDRLARPQSGWDPYEVWRTRVKVSPGVMQEHEREPLR
Ga0209733_11244922	3300027591	Forest Soil	MKRKAAEGVAAARPMSPAANEEFTAMANGLDKVAHPQLGWDPYEVWRTRVKESSSVMPERERDP
Ga0209329_10767632	3300027605	Forest Soil	KRRAAEGLAAAHRISPAANEEFTAMANGLDRVARPQSGWDPYEVWRTRVKPSSSVMPEHERDPLQ
Ga0209106_10274032	3300027616	Forest Soil	MKRKAAEGLAAAHRMSSAANEEFTAMANGLDQVASPQSGWDPYEVWRTRVKASSSVMPERERDPLH
Ga0208988_10898971	3300027633	Forest Soil	MKRRTADGLAAAHEMLPAANEEFTAVANGLDGVAGPRGWDPYEVWRTRVKESASVMPGPERDPLH
Ga0209625_10057402	3300027635	Forest Soil	MKRKAAEGLAAAHPMSTAANEEFTAMANGRERVARTQLGWDPYEVWRTRVKPSSSVMPEHERDPLQ
Ga0209625_11001991	3300027635	Forest Soil	MKRKAAGLAAAHRTSPAANEEFTAMKDDLDGVPPPQSGWDPYEVWRTRVKASSSVMSERE
Ga0209117_10329402	3300027645	Forest Soil	MKRKGAAGRDAFYRNSPAANEQFTGMVNGLDSLARPQSGWDPYEVWRTRVKAAFTLMQERELDPLR
Ga0209117_10414202	3300027645	Forest Soil	MKRKAAQGLAAAHRMPRAANEEFTAMANALDSVARAQSGWDPYEVWRTRVKESS
Ga0209388_10959771	3300027655	Vadose Zone Soil	MKRKAAEGLAAAHRTSPAANDEFTAMANGLDRVARPQSGWDPYEVWRTRVKVSSSVMPERERDPLH
Ga0208990_10418842	3300027663	Forest Soil	MKRKAAEGLAAAHRMSPAANEEFTAMANGLDGVASPQSGWDPYEVWRTRVKVSASVMPERERDPLH
Ga0208981_10627902	3300027669	Forest Soil	AHEMSPAANEEFTAVANGLDGVAGPRGWDPYEVWRTRVKESASVMPEPERDPLH
Ga0208981_10691272	3300027669	Forest Soil	MKRKAAEGLAAAHRMSSAANEEFTAMANGLDKVARPQSGWDPYEVWRTRVKVSASVMPERERDPLH
Ga0209118_10021388	3300027674	Forest Soil	MKRKAAEGRAAARPMSPAANEEFTAMANGLDRVAHPQSGWDPYEVWRTRVKESSSVMPERERDPLQ
Ga0209011_10021224	3300027678	Forest Soil	MKRKAAGGLAAAHRMSPAANEEFTAMVNGLDRVARPQSGWDPYEVWRTRVKASSSVMSEREREPLR
Ga0209011_10084383	3300027678	Forest Soil	VKTQGAAGLIAEYRWSPAAKEEFTGMVNGPDRLARPQSGWDPYEVWRTRVKMSSAVMQEREREPLR
Ga0209328_100427372	3300027727	Forest Soil	RKMKRRTADGLAAAHRIPPAANEEFTAMANALDWVARVHLSWDPYEVWRTRVKASSSVMSERERDPLH
Ga0209526_107067381	3300028047	Forest Soil	MKRKAAQGIAAAHRMPRAANEEFAAMANALDRVARPQLGWDPYEVWRTRVKGSSSVMQERERDPLR
Ga0307504_100081202	3300028792	Soil	MKRRAAEGLAAAHRMSPAANEEFTAMTNGLDRVARPQSGWDPYEVWRTRVKVSSSVMPERERDPLR
Ga0222749_100659412	3300029636	Soil	MKRKAAEGLAAARPMSPAANEEFTAMANGLERVARTQLGWDPYEVWRTRVKPSSSVMPEHERDPLQ
Ga0073994_120758741	3300030991	Soil	MKRRNAQGLAAAHRILSAANEEFTAVANGLDGVARAHSGWDPYEVWRTRVKKSSSEMPERERDP
Ga0073996_122852352	3300030998	Soil	KRKAAEELAAAHRMSPAANEEFTAMANGLDGVPGPQSGWDPYEVWRTRVKGSSTLMPERERDPLQ
Ga0073998_107765842	3300031023	Soil	MDKQERRKMKRKAAGLAAAHRKSPAANEEFTAMKNGLDGAARPQPAWDPYEVWRTRVKASSSVMSERERDPLH
Ga0307469_100227402	3300031720	Hardwood Forest Soil	MKRKAAEGLAAAQRMSPAANEEFTAMANGPDRVARPQSGWDPYEVWRTRVKVSSSVVPERERDPLR
Ga0307469_100235112	3300031720	Hardwood Forest Soil	MKRKAAEGLAAAHRMSAAANEEFTAMTNGLDRVARPQTGWDPYEVWRTRVKVSSNVMPERERDPLL
Ga0307473_107512452	3300031820	Hardwood Forest Soil	QKQERRKMKRKAAEGLAAAHRMSAAANEEFTAMTNGLDRVARPQTGWDPYEVWRTRVKVSSNVMPERERDPLL
Ga0307473_112668581	3300031820	Hardwood Forest Soil	MKRKAAEGLAAAHRMSAAANEEFTAMTNGLERVARPQSGWDPYEVWRTRVKVSSNVMPERERDPLL
Ga0307470_109690232	3300032174	Hardwood Forest Soil	MKRKAAEGLAAAHRMSAAANEEFTAMTNGLDRVARPQTGWDPYEVWRTRVKVSSSVVPERERDPLR
Ga0307471_1000491792	3300032180	Hardwood Forest Soil	MKRRTAEGLAAAHRMPPAANEEFTAMAHGLDGAARVHLGWDPYEVWRTRVKESSSVMPEPERDPLQ
Ga0307471_1037353621	3300032180	Hardwood Forest Soil	MERKAAEGLAAVNRMSPAAKEEFTGMVNGLDRLARPQSGWDPYEVWRTRVKGASTVMREREPDPVRQWVRLAPKA
Ga0307472_1001143682	3300032205	Hardwood Forest Soil	MKRKAAEGLAAAHRMSPAANEEFTAMTNGLERVARPQTGWDPYEVWRTRVKVSSNVMPERERDPLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097950

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences