Metagenome / Metatranscriptome Family F097957

Basic Information
Family ID	F097957
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	59 residues
Representative Sequence	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEMPCDISPAVRS
Number of Associated Samples	83
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	33.98 %
% of genes near scaffold ends (potentially truncated)	31.73 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Unclassified (67.308 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.923 % of family members)
Environment Ontology (ENVO)	Unclassified (32.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.923 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.35% β-sheet: 0.00% Coil/Unstructured: 57.65%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF08044	DUF1707	34.62
PF02515	CoA_transf_3	17.31
PF00106	adh_short	5.77
PF03779	SPW	4.81
PF13602	ADH_zinc_N_2	3.85
PF04542	Sigma70_r2	1.92
PF00196	GerE	0.96
PF00355	Rieske	0.96
PF11239	DUF3040	0.96
PF03640	Lipoprotein_15	0.96
PF06925	MGDG_synth	0.96
PF00300	His_Phos_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	17.31
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.92
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.92
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.92
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.92
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
All Organisms	root	All Organisms	32.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
cellular organisms	root	All Organisms → cellular organisms	32.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.96 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.96 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.96 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Nocardioides iriomotensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides iriomotensis	0.96 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001648\|JGI20242J16303_107872	Not Available	528	Open in IMG/M
3300003505\|JGIcombinedJ51221_10133238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1000	Open in IMG/M
3300003505\|JGIcombinedJ51221_10296351	Not Available	658	Open in IMG/M
3300003505\|JGIcombinedJ51221_10384319	Not Available	570	Open in IMG/M
3300003505\|JGIcombinedJ51221_10437951	Not Available	529	Open in IMG/M
3300004091\|Ga0062387_101255606	Not Available	583	Open in IMG/M
3300005327\|Ga0070658_11185932	Not Available	664	Open in IMG/M
3300005329\|Ga0070683_100231207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1758	Open in IMG/M
3300005343\|Ga0070687_100162098	Not Available	1323	Open in IMG/M
3300005344\|Ga0070661_101316422	Not Available	606	Open in IMG/M
3300005354\|Ga0070675_101426283	Not Available	638	Open in IMG/M
3300005434\|Ga0070709_10526261	Not Available	902	Open in IMG/M
3300005435\|Ga0070714_102289589	Not Available	525	Open in IMG/M
3300005444\|Ga0070694_100956171	Not Available	709	Open in IMG/M
3300005467\|Ga0070706_101252717	Not Available	681	Open in IMG/M
3300005547\|Ga0070693_100538175	Not Available	834	Open in IMG/M
3300005578\|Ga0068854_100872453	Not Available	789	Open in IMG/M
3300005591\|Ga0070761_10071612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1967	Open in IMG/M
3300005602\|Ga0070762_10135333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1462	Open in IMG/M
3300005610\|Ga0070763_10018766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3016	Open in IMG/M
3300005618\|Ga0068864_101538834	Not Available	668	Open in IMG/M
3300005618\|Ga0068864_101624438	Not Available	650	Open in IMG/M
3300005921\|Ga0070766_10553927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	769	Open in IMG/M
3300006028\|Ga0070717_10470407	Not Available	1134	Open in IMG/M
3300006172\|Ga0075018_10855524	Not Available	502	Open in IMG/M
3300006175\|Ga0070712_100975987	Not Available	732	Open in IMG/M
3300006804\|Ga0079221_10974905	Not Available	633	Open in IMG/M
3300006806\|Ga0079220_11094168	Not Available	644	Open in IMG/M
3300006852\|Ga0075433_10735467	Not Available	863	Open in IMG/M
3300006854\|Ga0075425_100562913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1312	Open in IMG/M
3300006871\|Ga0075434_100103722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2852	Open in IMG/M
3300006903\|Ga0075426_10140256	Not Available	1742	Open in IMG/M
3300009098\|Ga0105245_10036267	All Organisms → cellular organisms → Bacteria	4379	Open in IMG/M
3300010396\|Ga0134126_11137272	Not Available	870	Open in IMG/M
3300011119\|Ga0105246_10025784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3832	Open in IMG/M
3300012923\|Ga0137359_10395238	Not Available	1226	Open in IMG/M
3300012951\|Ga0164300_11008582	Not Available	536	Open in IMG/M
3300012960\|Ga0164301_10464992	Not Available	903	Open in IMG/M
3300012961\|Ga0164302_11913556	Not Available	505	Open in IMG/M
3300014969\|Ga0157376_10005311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8994	Open in IMG/M
3300016319\|Ga0182033_10675966	Not Available	902	Open in IMG/M
3300017924\|Ga0187820_1011813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2111	Open in IMG/M
3300017937\|Ga0187809_10009101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3392	Open in IMG/M
3300020081\|Ga0206354_10080263	Not Available	665	Open in IMG/M
3300020580\|Ga0210403_10326093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1257	Open in IMG/M
3300020580\|Ga0210403_10457322	Not Available	1040	Open in IMG/M
3300020581\|Ga0210399_10685002	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300020581\|Ga0210399_10771274	Not Available	787	Open in IMG/M
3300020581\|Ga0210399_10931183	Not Available	703	Open in IMG/M
3300020582\|Ga0210395_10032011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3857	Open in IMG/M
3300020582\|Ga0210395_10296639	Not Available	1215	Open in IMG/M
3300020583\|Ga0210401_10096023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2784	Open in IMG/M
3300020583\|Ga0210401_10312546	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300020583\|Ga0210401_10569061	Not Available	995	Open in IMG/M
3300020583\|Ga0210401_10587054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	976	Open in IMG/M
3300021088\|Ga0210404_10225773	Not Available	1012	Open in IMG/M
3300021171\|Ga0210405_10154807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1815	Open in IMG/M
3300021171\|Ga0210405_10651184	Not Available	817	Open in IMG/M
3300021178\|Ga0210408_10514001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	951	Open in IMG/M
3300021178\|Ga0210408_10559843	Not Available	907	Open in IMG/M
3300021180\|Ga0210396_10592344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	965	Open in IMG/M
3300021180\|Ga0210396_11187695	Not Available	639	Open in IMG/M
3300021403\|Ga0210397_11087687	Not Available	621	Open in IMG/M
3300021404\|Ga0210389_10271492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1328	Open in IMG/M
3300021407\|Ga0210383_10121505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2208	Open in IMG/M
3300021407\|Ga0210383_10964768	Not Available	724	Open in IMG/M
3300021478\|Ga0210402_11708025	Not Available	556	Open in IMG/M
3300021559\|Ga0210409_10810569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	809	Open in IMG/M
3300022523\|Ga0242663_1143206	Not Available	509	Open in IMG/M
3300022529\|Ga0242668_1111143	Not Available	567	Open in IMG/M
3300025898\|Ga0207692_10425998	Not Available	831	Open in IMG/M
3300025905\|Ga0207685_10134945	Not Available	1100	Open in IMG/M
3300025909\|Ga0207705_10909375	Not Available	682	Open in IMG/M
3300025918\|Ga0207662_10148831	Not Available	1488	Open in IMG/M
3300025924\|Ga0207694_10013426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6170	Open in IMG/M
3300025926\|Ga0207659_11248473	Not Available	638	Open in IMG/M
3300025934\|Ga0207686_10467176	Not Available	973	Open in IMG/M
3300026041\|Ga0207639_10525813	Not Available	1084	Open in IMG/M
3300026356\|Ga0257150_1036951	Not Available	709	Open in IMG/M
3300026998\|Ga0208369_1020714	Not Available	636	Open in IMG/M
3300027047\|Ga0208730_1005645	Not Available	1260	Open in IMG/M
3300027064\|Ga0208724_1004984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides iriomotensis	1215	Open in IMG/M
3300027066\|Ga0208236_1015588	Not Available	548	Open in IMG/M
3300027737\|Ga0209038_10054478	Not Available	1198	Open in IMG/M
3300027855\|Ga0209693_10118359	Not Available	1311	Open in IMG/M
3300027884\|Ga0209275_10204695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1068	Open in IMG/M
3300027889\|Ga0209380_10301796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	940	Open in IMG/M
3300028380\|Ga0268265_11583637	Not Available	660	Open in IMG/M
3300031544\|Ga0318534_10100611	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300031708\|Ga0310686_111411791	Not Available	697	Open in IMG/M
3300031715\|Ga0307476_10308534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1161	Open in IMG/M
3300031715\|Ga0307476_10341762	Not Available	1101	Open in IMG/M
3300031718\|Ga0307474_10020759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4787	Open in IMG/M
3300031718\|Ga0307474_10491136	Not Available	962	Open in IMG/M
3300031718\|Ga0307474_10938562	Not Available	685	Open in IMG/M
3300031753\|Ga0307477_10266614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1185	Open in IMG/M
3300031754\|Ga0307475_10271215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1361	Open in IMG/M
3300031754\|Ga0307475_10849678	Not Available	722	Open in IMG/M
3300031823\|Ga0307478_11345160	Not Available	593	Open in IMG/M
3300031823\|Ga0307478_11793619	Not Available	504	Open in IMG/M
3300031962\|Ga0307479_10201399	Not Available	1961	Open in IMG/M
3300031962\|Ga0307479_11305193	Not Available	687	Open in IMG/M
3300034817\|Ga0373948_0165653	Not Available	560	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.77%
Host-Associated	Host-Associated	19.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.96%
Plants	Host-Associated → Plants	19.23%
Aquatic	Environmental → Aquatic	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.81%
Freshwater	Environmental → Aquatic → Freshwater	3.85%
Sediment	Environmental → Aquatic → Sediment	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.04%
Loam	Environmental → Terrestrial → Soil → Loam	26.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001648	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027066	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF005 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20242J16303_1078722	3300001648	Forest Soil	MVITQQRTENMEYVRRLLRQKQPGFAVALELAVILVEEQLRSPDMPRDIGAGEPHGQ*
JGIcombinedJ51221_101332383	3300003505	Forest Soil	RTENMEYVRRLLRQKQPGFSVALELAVLLVERRLRSPDMPRDIRDDEPHDQ*
JGIcombinedJ51221_102963512	3300003505	Forest Soil	MEMVITQQRTENMEYVRRLLRQKQPGFAVALELAVILVEQQLRSPDMPRDISAGEPRGQ*
JGIcombinedJ51221_103843192	3300003505	Forest Soil	MVITQQRTENMEYVRRLLRQKQPGFSLALELAVILMEQQLRSPGMPRDIGAGEPHGQ*
JGIcombinedJ51221_104379512	3300003505	Forest Soil	GRPAGAPRLPSPARPAHRPLTPMVITQQRTENMEYVRRLLRQKQPGFAVALELAVILVEEQLRSPDMPRDIGAGEPHGQ*
Ga0062387_1012556061	3300004091	Bog Forest Soil	PLTPMVITQQRTENMEYVRSLLRQKQPGFSVALELAVILVEQQLRSPDMPRDIGASEPHGR*
Ga0070658_111859322	3300005327	Corn Rhizosphere	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERNLESPDVPCDISPAVRS*
Ga0070683_1002312074	3300005329	Corn Rhizosphere	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVRS*
Ga0070687_1001620981	3300005343	Switchgrass Rhizosphere	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEMPCDISPAVRS*
Ga0070661_1013164222	3300005344	Corn Rhizosphere	QQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVRS*
Ga0070675_1014262832	3300005354	Miscanthus Rhizosphere	MVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERNLESPDVPCDISPAVRS*
Ga0070709_105262611	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MVVTQQSTENMEYVRRLLKQKQPGFAAALELAADLVERDLGSPETPREINTAVRS*
Ga0070714_1022895891	3300005435	Agricultural Soil	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAADLVERDLGSPETPREINTAVRS*
Ga0070694_1009561712	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	TQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVRS*
Ga0070706_1012527172	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	EFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVRS*
Ga0070693_1005381751	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVRS*
Ga0068854_1008724532	3300005578	Corn Rhizosphere	RWPRQTLMSEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERNLESPDVPCDISPAVRS*
Ga0070761_100716123	3300005591	Soil	MVITQQRTENMEYVRRLLRQKQPGFSAALELAVILMEQQLRSPGMPRDIGAGEPHGQ*
Ga0070762_101353332	3300005602	Soil	MEMVITQQRTENMEYVRRLLRQKQPGFSVALELAVILVEQQLRSPDMPRDISAGEPRGQ*
Ga0070763_100187664	3300005610	Soil	MEMVITQQRTENMEYVRMLLRQKQPGFSLALESAVILVERQLRSPGMPRDISAGEPHDQ*
Ga0068864_1015388341	3300005618	Switchgrass Rhizosphere	MSEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPYDISPAVRS*
Ga0068864_1016244381	3300005618	Switchgrass Rhizosphere	MSEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERNLESPDVPCDISPAVRS*
Ga0070766_105539272	3300005921	Soil	MEMVITQQRTENMEYVRTLLRQKQPGFSLALESAVILVERQLRSPGMPRDISAGEPHDQ*
Ga0070717_104704071	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVRS*
Ga0075018_108555242	3300006172	Watersheds	TQQRTENMEYVRTLLRQKQPGFSVALELAVLLVERQLRSPDMPRDIRDDEPHDQ*
Ga0070712_1009759871	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AMVVTQQSTENMEYVRRLLKQKQPGFAAALELAADLVERDLGSPETPREINTAVRS*
Ga0079221_109749052	3300006804	Agricultural Soil	MLEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVCS*
Ga0079220_110941682	3300006806	Agricultural Soil	MSEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAADLVERDLESPEVPCDISPAVCS*
Ga0075433_107354672	3300006852	Populus Rhizosphere	MSEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVCS*
Ga0075425_1005629132	3300006854	Populus Rhizosphere	MLEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPETPRDISPAVRS*
Ga0075434_1001037226	3300006871	Populus Rhizosphere	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPETPRDISPAVRS*
Ga0075426_101402562	3300006903	Populus Rhizosphere	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVCS*
Ga0105245_100362671	3300009098	Miscanthus Rhizosphere	MSEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCD
Ga0134126_111372721	3300010396	Terrestrial Soil	MLEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPA
Ga0105246_100257846	3300011119	Miscanthus Rhizosphere	PRQTLMSEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVRS*
Ga0137359_103952382	3300012923	Vadose Zone Soil	MEMVITQQRTENMGYVRRLLRHKQPGFSVALELAVVLVERQLRSPGMPRDISAGKPHDQ*
Ga0164300_110085822	3300012951	Soil	MLEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEMPCDISPAVRS*
Ga0164301_104649922	3300012960	Soil	MSEFTQELTMAMVVTQQSTKNMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVRS*
Ga0164302_119135562	3300012961	Soil	TMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVRS*
Ga0157376_100053118	3300014969	Miscanthus Rhizosphere	MSEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERNLESQDVPCDISPAVRS*
Ga0182033_106759662	3300016319	Soil	TVAIVVTEQAIENIKYVRRLLEQKQPGFAAALELAADLVGRELSSPEMPCSIGAPEAS
Ga0182032_100422112	3300016357	Soil	MTVAIVVTEQAVENIEYVRRLLEHKQPGFAAALELAVNLVRWELRSRELPCSIGAPEAS
Ga0187820_10118134	3300017924	Freshwater Sediment	MEMAITRQSTENMEYVRRLLREKQPGFSAALELAVMLAERELMSPAMPCGACAAEGS
Ga0187809_100091015	3300017937	Freshwater Sediment	MEMAITRQSTENMEYVRRLLRQKQPGFSVALELAVILVEEQLRSPDMPRDIGAGEPHGQ
Ga0206354_100802632	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVRS
Ga0210403_103260933	3300020580	Soil	VVTQQSTENMEYVRRLLKQKQPGFAAALELAADLVERDLGSPESPRHISPALRS
Ga0210403_104573222	3300020580	Soil	MVITQQRTENMEYVRRLLRQKQPGFSLALELAVILMEQQLRSPGMPRDIGAGEPHGQ
Ga0210399_106850022	3300020581	Soil	MVITQQRTENMEYVRRLLRQKQPGFAVALELAVILVEEQLRSPDMPRDIGAGEPHGQ
Ga0210399_107712742	3300020581	Soil	MAMVFTLQSTENMEYVRRLLKQKQPGFAAALELAADLVERDLGSPESPRDISPAVRS
Ga0210399_109311832	3300020581	Soil	MEMVITQQRTENMEYVRRLLRQKQPGFSVALELAVLLVERQLRSPDMPRDIRDDEPHDQ
Ga0210395_100320114	3300020582	Soil	MVITQQRTENMEYVRRLLRQKQPGFSAALELAVILMEQQLRSPGMPRDIGAGEPHGQ
Ga0210395_102966392	3300020582	Soil	MEMVITQQRTENMEYVRRLLRQKQPGFSVALELAVLLVERRLRSPDMPRDIRDDEPHDQ
Ga0210401_100960234	3300020583	Soil	MEMVITQQRTENMEYVRKLLRHKQPGFSVALELAVILVEQQLRSPDMPRDIGAGEPHGR
Ga0210401_103125463	3300020583	Soil	MEMVITQQRTENMEYVRTLLRQKQPGFSVALELAVLLVERQLRSPDMPRDIRDDEPHDQ
Ga0210401_105690613	3300020583	Soil	MEMVITQQRTENMEYVRTLLRQKQPGFSLALESAVILVERQLRSPGMP
Ga0210401_105870542	3300020583	Soil	MEIVITRQSAENMEYVRRLLKQKQPGFAAALELAVDLVERELGSPELPCDVSAAERSGQ
Ga0210404_102257732	3300021088	Soil	MAMVVTQRSTENMEYVRRLLKQKQPGFAAALELAADLVERDLGSPESPRDISPAVRS
Ga0210405_101548071	3300021171	Soil	AMVVTQQSTENMEYVRRLLKQKQPGFAAALELAADLVERDLGSPESPRDISPAVRS
Ga0210405_106511842	3300021171	Soil	PRLPSPARPSHRPLTPMEMVITQQRTENMEYVRRLLRQKQPGFSVALELAVLLVERRLRSPDMPRDIRDDEPHDQ
Ga0210408_105140013	3300021178	Soil	MSEFTQELTMAMVVTQRSTENMEYVRRLLKQKQPGFAAALELAADLVERDLLSPEKPRDISPAVRS
Ga0210408_105598432	3300021178	Soil	MAMVFTLQSTENMEYVRRLLKQKQPGFAAALELAADLVERDLGSPESPRDISPALRS
Ga0210396_105923442	3300021180	Soil	MKIVITAQSAENMEYVRRLLKQKQPGFAAALELAVDLVERELGSPELPRDVSAAERSGQ
Ga0210396_111876951	3300021180	Soil	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAADLVERDLGSPESPRDISPAVRS
Ga0210397_110876871	3300021403	Soil	MVVTQQSTENMEYVRRLLKQKQPGFAAALELAADLVERDLLSPETPRDISPALRS
Ga0210389_102714922	3300021404	Soil	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAADLVERDLLSPETPRDISPALRS
Ga0210383_101215051	3300021407	Soil	MAMVMTEQSAQNTEYVRRLLKQKQPEFSATLELAVDLGQPELSSPEMPRDVSAGRLDRLAED
Ga0210383_109647682	3300021407	Soil	MEMVITQQRTENMEYVRTLLRQKQPGFSLALESAVILVERQLRSPGMPRDISAGEPHDQ
Ga0210402_117080251	3300021478	Soil	MSEFTQELTMAMVVTQRSTENMEYVRRLLKQKQPGFAAALKLAADLVERDLLSPEKPRDISPAVRS
Ga0210409_108105693	3300021559	Soil	PLTPIEMVITQQRTENMEYVRTLLRQKQPGFSVALELAVLLVERQLRSPDMPRDIRDDEPHDQ
Ga0242663_11432062	3300022523	Soil	MVITQQRTENMEYVRRLLRQKQPGFSLALELAVILMEQQLRSPGMPRDIGAG
Ga0242668_11111432	3300022529	Soil	MEMVITQQRTENMEYVRRLLRQKQPGFSVALELAVILMEQQLRSPGMPRDIGAGEPHGQ
Ga0207692_104259981	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAADLVERDLGSPETPREINTAVRS
Ga0207685_101349452	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAADLVERDLASPETPREINTAVRS
Ga0207705_109093752	3300025909	Corn Rhizosphere	MSEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERNLESPDVPCDISPAVRS
Ga0207662_101488313	3300025918	Switchgrass Rhizosphere	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEMPCDISPAVRS
Ga0207694_100134265	3300025924	Corn Rhizosphere	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERNLESPDVPCDISPAVRS
Ga0207659_112484731	3300025926	Miscanthus Rhizosphere	MVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERNLESPDVPCDISPAVRS
Ga0207686_104671762	3300025934	Miscanthus Rhizosphere	MSEFTQELTMAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVRS
Ga0207639_105258132	3300026041	Corn Rhizosphere	MAMVVTQQSTENMEYVRRLLKLKQPGFAAALELAVDLVERDLESPEVPCDISPAVRS
Ga0257150_10369512	3300026356	Soil	MEMVITQQRTENMEYVRKLLRQKQPGFSVALELAVILVEQQLRSPDMPRDIGAGEPHGR
Ga0208369_10207142	3300026998	Forest Soil	MVITQQRTENMEYVRRLLRQKQPGFAVALELAVILVEQQLRSPDMPRDISAGEPRGQ
Ga0208730_10056453	3300027047	Forest Soil	MEMVITQQRTENMEYVRRLLRQKQPGFAVALELAVILVEQQLRSPDMPRDISAGEPRGQ
Ga0208724_10049842	3300027064	Forest Soil	MEMVIAQQRTENMEYVRRLLRQKQPGFSVALELAVLLVERRLRSPDMPRDIRDDEPHDQ
Ga0208236_10155882	3300027066	Forest Soil	TENMEYVRRLLRQKQPGFSLALELAVILMEQQLRSPGMPRDIGAGEPHGQ
Ga0209038_100544783	3300027737	Bog Forest Soil	MVITQQRTENMEYVRSLLRQKQPGFSVALELAVILVEQQLRSPDMPRDIGASEPHGR
Ga0209693_101183592	3300027855	Soil	MEMVITQQRTENMEYVRMLLRQKQPGFSLALESAVILVERQLRSPGMPRDISAGEPHDQ
Ga0209275_102046952	3300027884	Soil	MEMIITQQRTENMEYVRRLLRQKQPGFAVALELAVILVEQQLRSPDMPRDISAGEPRGQ
Ga0209380_103017961	3300027889	Soil	MEMVITQQRTENMEYVRRLLRQKQPGFSVALELAVILVEQQLRSPDMPRDISAGEPRGQ
Ga0268265_115836372	3300028380	Switchgrass Rhizosphere	MAMVVTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPALRS
Ga0318534_101006111	3300031544	Soil	MTVAIVVTEQAIENIKYVRRLLEQKQPGFAAALELAADLVGRELSSPEMPCSIGAPEAS
Ga0310686_1114117912	3300031708	Soil	MHMVITQQRTENMEYVRRLLRQKQPGFSVALELAVVLVERQLRSPDMPRDISAGEPHDQ
Ga0307476_103085343	3300031715	Hardwood Forest Soil	HRPLTPMEMVITQQRTENMEYVRRLLRQKQPGFSVALELAVLLVERRLRSPDMPRDIRDDEPHDQ
Ga0307476_103417621	3300031715	Hardwood Forest Soil	MVVTQQSTENMEYVRKLLKQKQPAFAASLELAVELVERDLRSPKMPRDISTPA
Ga0307474_100207594	3300031718	Hardwood Forest Soil	MEMVITQQRTENMEYVRRLLRQKQPGFSVALELAVLLVERQLRSPDMPRHIRDDEPHDQ
Ga0307474_104911363	3300031718	Hardwood Forest Soil	MVVIQQSTENMEYVRKLLKQKQPAFAASLELAVELVERDLRSPKMPRDISTPAHP
Ga0307474_109385622	3300031718	Hardwood Forest Soil	MEMVITQQRTENMEYVRTLLRQKQPGFSLALESAVILVERQLRTPDMPRDISAGEPHDQ
Ga0307477_102666141	3300031753	Hardwood Forest Soil	RPAHRPLTPMVITQQRTENMEYVRRLLRQKQPGFSVALELAVILVEQQLRSPGMPRDIGAGEPHGQ
Ga0307475_102712152	3300031754	Hardwood Forest Soil	MEMVITQQRTENMEYVRRLLRHKQPGFSLALELAVVLVERQLRSPGMPRDISAGKPHDQ
Ga0307475_108496782	3300031754	Hardwood Forest Soil	LTLMVITQQRTENMEYVRRLLRQKQPGFSVALELAVILVEQQLRSPGMPRDIGAGEPHGQ
Ga0307478_113451602	3300031823	Hardwood Forest Soil	MEMVITQQRTENMEYVRRLLRQKQPGFSVALELAVRLVEQQLRSPDMPRDIRDDEPHDQ
Ga0307478_117936191	3300031823	Hardwood Forest Soil	ARLAHRPLTPMEMVITQQRTENMEYVRRLLRHKEPGFSLALELAVVLVERQLRSPGMPRDISAGKPHDQ
Ga0307479_102013993	3300031962	Hardwood Forest Soil	MVITQQRTENMEYVRRLLRQKQPGFSVALELAVILVEQQLRSPGMPRDIGAGEPHGQ
Ga0307479_113051932	3300031962	Hardwood Forest Soil	MKVIAMTEPSAQNMEYVRRLLKQKQPGFAAVLELAVDLVERERCAPELPRDVSTGENS
Ga0373948_0165653_3_164	3300034817	Rhizosphere Soil	VTQQSTENMEYVRRLLKQKQPGFAAALELAVDLVERDLESPEVPCDISPAVRS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097957

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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