Metagenome / Metatranscriptome Family F097983

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097983
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	62 residues
Representative Sequence	DHVGHTVTITGVVSNATLHGMKEDAKAEAKEHGVDKHSTEHGHMTVTNLTMVSDSCKK
Number of Associated Samples	83
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	20.19 %
% of genes from short scaffolds (< 2000 bps)	20.19 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (80.769 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (22.115 % of family members)
Environment Ontology (ENVO)	Unclassified (28.846 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.60% β-sheet: 0.00% Coil/Unstructured: 81.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF05532	CsbD	6.73
PF04226	Transgly_assoc	3.85
PF12732	YtxH	2.88
PF01566	Nramp	1.92
PF05974	DUF892	1.92
PF06348	DUF1059	1.92
PF01268	FTHFS	1.92
PF03602	Cons_hypoth95	1.92
PF01145	Band_7	0.96
PF01564	Spermine_synth	0.96
PF08281	Sigma70_r4_2	0.96
PF10944	DUF2630	0.96
PF02276	CytoC_RC	0.96
PF13545	HTH_Crp_2	0.96
PF00011	HSP20	0.96
PF01435	Peptidase_M48	0.96
PF11154	DUF2934	0.96
PF02368	Big_2	0.96
PF08327	AHSA1	0.96
PF04909	Amidohydro_2	0.96
PF10099	RskA	0.96
PF00999	Na_H_Exchanger	0.96
PF02518	HATPase_c	0.96
PF13852	DUF4197	0.96
PF01204	Trehalase	0.96
PF13502	AsmA_2	0.96
PF00933	Glyco_hydro_3	0.96
PF01988	VIT1	0.96
PF07690	MFS_1	0.96
PF01814	Hemerythrin	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	6.73
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	3.85
COG0742	16S rRNA G966 N2-methylase RsmD	Translation, ribosomal structure and biogenesis [J]	1.92
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	1.92
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	1.92
COG2242	Precorrin-6B methylase 2	Coenzyme transport and metabolism [H]	1.92
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	1.92
COG2759	Formyltetrahydrofolate synthetase	Nucleotide transport and metabolism [F]	1.92
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	1.92
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	1.92
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.96
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.96
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.96
COG1626	Neutral trehalase	Carbohydrate transport and metabolism [G]	0.96
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.96
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.96
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.96
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.96
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
All Organisms	root	All Organisms	19.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
cellular organisms	root	All Organisms → cellular organisms	19.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.92 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101833698	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300004100\|Ga0058904_1341163	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300004631\|Ga0058899_10101419	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300006172\|Ga0075018_10197194	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	953	Open in IMG/M
3300009088\|Ga0099830_11392622	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300009089\|Ga0099828_11458608	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300011120\|Ga0150983_10324219	All Organisms → cellular organisms → Bacteria → Acidobacteria	1461	Open in IMG/M
3300011120\|Ga0150983_14420023	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300011120\|Ga0150983_15441463	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300012961\|Ga0164302_10527995	Not Available	839	Open in IMG/M
3300021168\|Ga0210406_10927972	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300021401\|Ga0210393_11008078	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300024182\|Ga0247669_1025948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300027678\|Ga0209011_1204528	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300027882\|Ga0209590_10091470	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300027910\|Ga0209583_10386945	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300029636\|Ga0222749_10263911	All Organisms → cellular organisms → Bacteria → Acidobacteria	880	Open in IMG/M
3300031753\|Ga0307477_10194938	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300032174\|Ga0307470_10061870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1976	Open in IMG/M
3300032180\|Ga0307471_101207334	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300032180\|Ga0307471_102973446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.15%
Host-Associated	Host-Associated	3.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.35%
Aquatic	Environmental → Aquatic	4.81%
Plants	Host-Associated → Plants	3.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.46%
Sediment	Environmental → Aquatic → Sediment	2.88%
Freshwater	Environmental → Aquatic → Freshwater	1.92%
Peat	Environmental → Terrestrial → Peat	1.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.62%
Loam	Environmental → Terrestrial → Soil → Loam	27.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	22.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	22.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001083	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004101	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004118	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004134	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF248 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004136	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF214 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1023565123	3300000955	Soil	HVGHTVTITGTVSNAEMHGMKEDAKAEAKEHGMDQDSTEHGHMTVKNVKMVSASCKQ*
JGI12678J13193_10057901	3300001083	Forest Soil	TSDAVKLGDHVGHTVTITGVVSNAAMHGMKEDTKAEAKEHGVGKHSTEHGSMTVTALTMVSESCQK*
JGI12627J18819_103546891	3300001867	Forest Soil	ALNQHVGHTVRVTGAVSNATMHGAKEDAKEKASEHGVGDSTEHGHMTVTSLKMVSESCSH
JGIcombinedJ26739_1018336981	3300002245	Forest Soil	IKSDSLKLGDHIGHTVTITGVVSNAKMHGMKEDTKAEAKEHGMKKDSTEHGHLTATDVTMVSDTCKK*
Ga0058904_13411631	3300004100	Forest Soil	WEVKSDSVKLAPHVGHTMTITGVVSNATMHGVKEDAKSEAKEHGVDKDSTEHGHMTVTNVKMVSNSCQN*
Ga0058896_10268661	3300004101	Forest Soil	DTVKLGNHVSHTVTITGVVSNAMMHGAKEDVKDEAKEHGMDKNSTEHGHMTVTYLKMVSESCSN*
Ga0058886_13707312	3300004118	Forest Soil	NGHKLSNHVGHTVTITGVVSNAELHGAKEDAKSEAKEHGMDKESTEHGHLKVTNLKMVSDSCKQ*
Ga0058887_14959912	3300004119	Forest Soil	HSVTITGVVSNAKMHGMKEDAKAEAKEHGMDKDSTEHGSITVTNLTMVSDTCKK*
Ga0058906_13297651	3300004134	Forest Soil	DHVSHTVTITGVVSNATLHGAKEDVKDEAKEHGMAKDSTEHGHMTVTHLKMVNDGCSK*
Ga0058889_14354971	3300004136	Forest Soil	LKLGDHVGHTVTITGVVSNAKMHGMKEDAKAEAKEHGMGKNSTEHGHMTVTNLTMVSDTCKK*
Ga0058897_100124952	3300004139	Forest Soil	VKLGDHVGHSVTITGVVSNAKMHGMKEDAKAEAKEHGMDKDSTEHGSITVTNLTMVSDTCKK*
Ga0058897_100431301	3300004139	Forest Soil	DHVGHTVRITGVVSNAKMHGMTEDAKDEAREHGVAKNSTEHGHMTVTYVKMVSDSCSK*
Ga0058899_101014191	3300004631	Forest Soil	WEVKSDSVDLAKHVGHTITVTGAVQNAALHGAKEDTKAAAKEHGVDKNATEHGHMIVTNLKMVSGSCEK*
Ga0070714_1021164031	3300005435	Agricultural Soil	KLAPHVGHTITVTGVVANAALHGTKEDVKGEAREHGVDKNSTEHGHMTVTNAKMVSDSCQN*
Ga0070713_1008364642	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	KSDAVKLAPHVGHTMTITGVVSNATLHGAKEDVKGEAREHGVDKNSTEHGHMTVTNAKMISDSCQN*
Ga0073909_106088912	3300005526	Surface Soil	KLGDHVGHTVTITGVVANAKMHGMKEDAKAEAKEHGMKKDSTEHGHLTATDVTMVSDTCKK*
Ga0070731_103202513	3300005538	Surface Soil	LAKHLGHTVTVTGAVSNAALHGAKEDTKAEAREHGVDKSSTEHGHMTVTNLKMVSGSCEK
Ga0066706_109475522	3300005598	Soil	HVGHTVKITGVVANAAAHGMKEDAKSEMKEHGMEKHATEHGHMTVTYLAMVSDSCKK*
Ga0066789_100423723	3300005994	Soil	SDAVKLGEHVGHSVRITGVVSNATMHGAKEDAKAEAKEHGVGENSAEHGHLTATGLKMVSESCSQ*
Ga0070717_115259021	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KLDEHVGHSVAVTGVVSHHKEHAMKEDAKAEMKEHGMDKDAKEHGHMTATALTMVSDSCQK*
Ga0075017_1016639771	3300006059	Watersheds	EIKSENVKLADHIGHTVTITGVVANAEMHGMKEDAKGEAKEHGMDKDSTEHGHMTVTNLKMVSESCKK*
Ga0075018_101971943	3300006172	Watersheds	DSVNLGQHVGHTVKIVGVVSNAKAHGMKEDAKAEMKEHGMEKHTAERGHMTVTDLTMVSDTCQK*
Ga0079221_111246612	3300006804	Agricultural Soil	VKMAPHVGHTVTITGVVSNATAHGLKEDTKTEAREHGIDKDSTEHGHMTVTSLKMVSDSCSR*
Ga0079220_100351621	3300006806	Agricultural Soil	LHSDSLKLGDHVGHTVTITGVVSNATLHGAKEDAKAEAKEHGVDKDSTEHGHMTITYLKMVSDTCSK*
Ga0079220_117659212	3300006806	Agricultural Soil	TLKLGDHVGHKVTITGVVSNAKMHGMKEDVKAEAKEHGMDKDSTEHGHMTVTYLKMVSDTCSK*
Ga0099830_105528891	3300009088	Vadose Zone Soil	KSDTVKLGDHVAHTVTITGVVSNATLHGAKEDAKAEAKEHGMDKSSTEHGHMTVTHLKMVSDSCSK*
Ga0099830_113926222	3300009088	Vadose Zone Soil	STWEIKSDSLKLGDHVGHKVAVTGVVTNAKMHGMKEDAKDEAKEHGVATHSTEHGHMTVTNLSMVSESCQK*
Ga0099828_114586082	3300009089	Vadose Zone Soil	IKSDSVRLGPHVEHTMTITGVVSNATLHGVKEDVKAEAKEHGVAKNSTEHGHMTVTNAKMVSDSCQN*
Ga0116225_11684921	3300009524	Peatlands Soil	DHVGHTVTITGVVSNATMHGMKEDAKAEAKEHGVDKGSTEHGHMAVTNLKMVSDSCKK*
Ga0116224_101046131	3300009683	Peatlands Soil	LVDHVGHTVTITGVVSNATMHGMKEDAKAEAKEHGVDKGSTEHGHMAVTNLKMVSDSCKK
Ga0126370_119949832	3300010358	Tropical Forest Soil	VGHTVRVTGVVRNAEAHGMKEDAKEKAAEHGVDKNETEHGHMEVTAVKHVSESCKK*
Ga0126378_103444132	3300010361	Tropical Forest Soil	MASHVGHTVTVTGVVSNATLHGLKEDAKTEAREHGIDKNSTEHGHMTVTGLKMVSENCLRGRSG*
Ga0126378_124211282	3300010361	Tropical Forest Soil	VKMAPHVGHTVTVTGVVPNATAHGVKEDAKSEAREHGVAKNSTEHGHMTVTSLKMVSKSCS*
Ga0150983_103242191	3300011120	Forest Soil	WELHSDSLKLGDHVGHTVTITGVVSNAKMHGMKEDAKAEAKEHGVAKHSTEHGSITVTDLSMVSDSCKK*
Ga0150983_105230924	3300011120	Forest Soil	DIVKLGDHVSHTVTITGVVSNATLHGAKEDVKDEAKEHGMGKDSTEHGHMTVTYLKMVSDSCSK*
Ga0150983_107097481	3300011120	Forest Soil	HVSHTVTITGVVSNATLHGAKEDVKAEAKEHGVDKNSTEHGHMTVTYLKMVSDGCSK*
Ga0150983_116015991	3300011120	Forest Soil	VKLAPHVGHTITVTGVVSNATLHGVKEDVKAEAKEHGVDKDSTEHGHMTVTSAKMVSNSCQK*
Ga0150983_135568441	3300011120	Forest Soil	HVGHAVTITGVVSNATLHGLKEDVKGEAKEHGVGKASTEHGSVTVTNLTMVSNSCRK*
Ga0150983_144200231	3300011120	Forest Soil	TWEIKSDTVKLGNHVSHTVTITGVVSNAMMHGAKEDVKDEAKEHGMDKNSTEHGHMTVTYLKMVSESCSN*
Ga0150983_154414632	3300011120	Forest Soil	WEIKSDTVKLGNHVGHTVRITGVLPNATLHGVKEDAKAEAKEHGVDKNSTEHGHMTVTYLKMVSESCSK*
Ga0137393_112816992	3300011271	Vadose Zone Soil	LGDHVGHTVKITGVVSNAAMHGVKEDAKDSAREHGMGKNSTEHGHLTATNLTMVSDSCTK
Ga0137389_104019962	3300012096	Vadose Zone Soil	LELKRNGHRLSNHVGHTVTITGVVSNAELHGAKEDAKAEAKEHGMDKDSTEHGHMKVTNLKMVSDSCKP*
Ga0137388_102077952	3300012189	Vadose Zone Soil	DLEIKRDTVNLGEHIGHTVTMTGVVYHAKIHAMKEDVKDEAREHGVDKNSAERGHITVTDLKMVSDSCQK*
Ga0137399_102961702	3300012203	Vadose Zone Soil	LGDHVGHTVRITGVVSNAAMHGVKEDAKDAAKEHGMGKNSTEHGHLTVVNLTMVSDTCKK
Ga0137362_101334661	3300012205	Vadose Zone Soil	DDHVGHTVAVTGVVSHHKAHAMKEDVKAEMKEHGMDKDAKEHGHMTVTALKMVSDTCQK*
Ga0137381_102198273	3300012207	Vadose Zone Soil	GDHVGHTVKITGVVSNAKMHGMKEDTKEEMKEHGMNKHATESGHLTVTDLSMVSDSCQ*
Ga0137358_104722742	3300012582	Vadose Zone Soil	EHVGHTVSVTGVVSHAKMHGMKEDAKDEAKEHGVDKDATEHGHMTVTNLSMVSESCHQ*
Ga0137413_102644952	3300012924	Vadose Zone Soil	GEHVGHTVKVTGVVSNAAAHGAKEDAKEKASEHGVGDAAEHGHMTVTGLKMVSESCSK*
Ga0137419_113636642	3300012925	Vadose Zone Soil	VGHTVRITGVVSNAAMHGVKEDAKDAAKEHGMGKNSTEHGHLTVVNLTMVSDTCKK*
Ga0137416_115784251	3300012927	Vadose Zone Soil	IKSDAVKLGEHIGHTVRITGVVSNATAHGAKEDAKAEAKEHGVGENSTEHGHLTATGLKMVSESCSQ*
Ga0137410_113619281	3300012944	Vadose Zone Soil	HVGHTVTVTGVVSNAALHGLKEDAKEEAKEHGMDKDAKEHGHMTVTDVKMVSESCKK*
Ga0164302_105279952	3300012961	Soil	KSDSVDLAPHVGHTVTVTGVVANAEMHGMKEDAKEEAKEHGMDKKAEEHGHLTATAVKMVSESCKK*
Ga0157379_101345021	3300014968	Switchgrass Rhizosphere	SVKLDEHVGHTVKITGVVANATAHGMKEDTKEEMKEHGMNKHDTEHGHMTVTDLTMVSDSCQK*
Ga0132256_1003165433	3300015372	Arabidopsis Rhizosphere	LDEHVGHTVKIVGVVSNATTHGMKEDTKEEMKEHGMDKNSTEHGHMTVTDLTMVSGSCQK
Ga0187821_102225473	3300017936	Freshwater Sediment	KSDSVDLAKHVGHTITVTGAVQNAALHGAKEDTKAEAKEHGVGKNSTEHGHMTVTNVKMVSNGCEK
Ga0187805_105884681	3300018007	Freshwater Sediment	DSVDLAKHVGHTITVTGAVQNAALHGAKEDTKAEAKEHGVGKNSTEHGHMTVTNIKMVSGSCEK
Ga0210403_100070051	3300020580	Soil	LDEHVGHTVTVTGVVAHHKAHAMKEDTKAEMKEHGMDKGAKEHGHLTVADLTMVSDTCPK
Ga0215015_100008661	3300021046	Soil	VTITGVVSNAKMHGMKEDAKAEAKEHGMDKDSTEHGSITVTNLTMVSDTCKK
Ga0210406_109279722	3300021168	Soil	AKGSTWELKSNGHKLSHHVGHTVTITGVVSNAEMHGAKEGVKAEAKEHDIDQDSTEHGHMKVTNLKMVSDSCKR
Ga0210406_112928072	3300021168	Soil	NGHNLSHHVGHTVTVTGVVSNPEMHGAKEDAKAEAKEHDLDKDSTEHGHLKVTNLKMVSDSCNGSH
Ga0210400_100775521	3300021170	Soil	HTITVTGVVSNAAMHGAKEDAKEKAKEHGVAKNSTERGHMTVTNAKMVSDSCSN
Ga0210405_101109181	3300021171	Soil	DSVDLAKHVGHTVTVTGAVSNAAVHGAKEDAKDEAREHGVDKNSTEHGHMTVTNLKMVGSSCEK
Ga0210405_102894853	3300021171	Soil	GEHVGHTVTITGVVSNATAHGMKEDTKEEMKEHGMDKHATEHGHLTATALTMVSDTCQK
Ga0210408_101163583	3300021178	Soil	DSIDFAKHVGHTITVTGAVQNATLHGAKEDTKAEAKEHGVGKNSTEHGHMTATNLKMVSGSCEK
Ga0210408_102317431	3300021178	Soil	IKSDSVKLAPHVGHTMTITGVVSNATLHGVKEDVKSEAKEHGVDKDSTEHGHMTVTNAKMVSDSCQN
Ga0210393_110080782	3300021401	Soil	GSTWEVKSDSVALAPHVGHTITTTGAVSNAALHGAKEDAKEEAKEHGVAKNASEHGHMTVTNLKMISKSCEK
Ga0210389_109525272	3300021404	Soil	DSVKLDEHVGHTVTVTGVVAHHKAHAMKEDTKAEMKEHGMDKGAKEHGHLTVSDLTMVSDTCPK
Ga0210394_106883991	3300021420	Soil	GHTMTITGVVFNATLHGVKEDAKSEAKEHGFDKDSTEHGHMTVTNAKMVSDSCQN
Ga0210384_1000197930	3300021432	Soil	TVRLGEHVGHTVRITGVVSNATLHGAKEDAKDEAKEHGVAKGSTEHGHLTVTNLSMVSEGCKP
Ga0210384_112343671	3300021432	Soil	TVTGAVSNAALHGAKEDAKDEAREHGVDKNSTEHGHMTVTNLKMVGSSCEK
Ga0210402_106929041	3300021478	Soil	HVGHTMTVTGVVSNATLHGVKEDAKSEAKEHGVDKDSTEHGHMTVTNAKMVSGSCQN
Ga0210402_117744442	3300021478	Soil	VPLTEHVGHTVRVTGVVSNAKMHGAKEDAKAEAKEHGVGENSTEHGHMTVTGLKMVSESCSQ
Ga0247669_10259482	3300024182	Soil	WEIKSDTVKLGDHVAHTVTITGVVANATLHGMKEDAKAEAKEHGVDKDSTEHGHMTVTHLKMVSDSCSK
Ga0207699_103304191	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ALSEHVGHTVKVTGVVSNAAAHGAKEDAKEKAAEHGVGDSAEHGHMTVTGLKMVSESCSK
Ga0207684_106211871	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SDALRLGDHVGHTVTITGVVSNAAMHGMKEDAKAEAKEHGVDKHSTEHGHMTVTNLTMVSDTCKK
Ga0207646_119381111	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	HTVTITGVVSNAKMHGMKEDAKAEAKEHGMDKDSTEHGHMTVTYLKMVSDSCSK
Ga0207674_108882872	3300026116	Corn Rhizosphere	MTPSRLVTVTGVVSNAAMHGMKEDAKDEAKEHGMDKKATEHGHLTATAVKMVSDSCKK
Ga0207675_1017482031	3300026118	Switchgrass Rhizosphere	AHTVTITGVVSNATLHGVKEDAKEEAKEHGIDKDSTEHGHMAVTHLKMVSESCSK
Ga0257171_10222931	3300026377	Soil	DHVGHTVTITGVVSNATLHGMKEDAKAEAKEHGVDKHSTEHGHMTVTNLTMVSDSCKK
Ga0255350_11383052	3300026502	Soil	EHVGHTVKITGVVANATAHGMKEDTKEEMKEHGMDTHAERGHMTVTNLSMVSDTCQK
Ga0179593_10690793	3300026555	Vadose Zone Soil	KADSLNLGEHVGHTVSVTGVVSHAKMHGMKEDAKDEAKEHGVDKDATEHGHMTVTNLSMVSESCHQ
Ga0209625_10546441	3300027635	Forest Soil	TWELTSNGHKLSNHVGHTVTITGVVANAEMHGAKEDAKAETKEHDMDKASTEHGHLKVTNLKMVSDSCKP
Ga0209011_11236491	3300027678	Forest Soil	DSLKLGDHVGHTVTITGVVSNAAIHGVKEDVKSEAKEHGMGKNSTEHGHMTVTNLTMVSDSCKN
Ga0209011_12045282	3300027678	Forest Soil	SDSAKLDDHVGHTVTVTGVVSHHKEHAMKEDAKAEMKEHGMDKGAKEHGHMTVTDVKMVSDSCQK
Ga0208991_12469371	3300027681	Forest Soil	DSVKLGDHVGHSVTVDGVVSNAKLHGAKEDIKSEAKEHGLDKDATEHGHMTVTNLTMVSDSCKK
Ga0209073_100233994	3300027765	Agricultural Soil	KHVGHTVTVTGAVSNAALHGTKEDAKTKAREHGIDKDSAERGHMTVTNLKMVSASCEK
Ga0209060_103260941	3300027826	Surface Soil	EIKSDAVALSEHVGHTVKVTGVVSNAMAHGAKEDAKEKASEHGVGDSAEHGHVTVTGIKMVSESCSK
Ga0209517_101840194	3300027854	Peatlands Soil	TVTITGVVSNATMHGMKEDAKAEAKEHGVDKGSTEHGHMAVTNLKMVSDSGKK
Ga0209166_101186433	3300027857	Surface Soil	HVSHTVTITGVVSNATLHGAKEDAKAEAKEHGMDKNSAEHGHMTVTHLKMVSDTCSN
Ga0209590_100914701	3300027882	Vadose Zone Soil	GGNWEIRSDTVKLGEHVGHTVTITGVVSNATMHGMKEDVKAEAKERGIDKDSTEHGHMTVTNLKMVSGSCKK
Ga0209583_103869451	3300027910	Watersheds	GTWEVKSDSVKLAPHVGHTMTITGVVSNATLHGAKEDVKAEAKEHGVDKDSTEHGHLTATNLTMVSDTCKK
Ga0222749_100915043	3300029636	Soil	DSVKLGEHVGHTVTITGVVSNATAHGMKEDTKEEMKEHGMDKNATEHGHLTATAVSMVSDSCQK
Ga0222749_102639111	3300029636	Soil	LAPHVGHTMTITRVVSNATLHGVKEDVKSEAKEHGVDKDSTEHGHMTVTNAKMVSDSCQN
Ga0222749_102824923	3300029636	Soil	GHTVTVTGAVSNAALHGAKEDTKAEAREHGIDKSSTEHGHMTVTNLKMVGSSCEK
Ga0311333_114487332	3300030114	Fen	HVGHTVKIVGVVSNTMAHGMKEDTKEEMKEHGMDKHAKESGHMTVTNLTMVSDTCQK
Ga0170834_1140621541	3300031057	Forest Soil	EIKSDAVALGEHVGHSVRVTGVVSNAAIHGAKEDAKEKASEHGVGDAAEHGHMTVTGLKMVSESCSK
Ga0307477_101949384	3300031753	Hardwood Forest Soil	LDEHVGHTVKITGVVPNAMAHGMKEDTKEEMKEHGMDKHATEHGHLTVTDLTMVSDTCPK
Ga0307475_102316542	3300031754	Hardwood Forest Soil	SVTITGVVSNAKMHGMKEDAKAEAKEHGMDKDSSEHGSMTVTNLAMVSDTCKK
Ga0307470_100618701	3300032174	Hardwood Forest Soil	DGSKWDVKSDSVKLAPHVGHTVTVTGVVSNAGAHGAKEDIKDEAKEHGVGKNSTETGDLTVTTLKMVSKSCKE
Ga0307470_104150631	3300032174	Hardwood Forest Soil	KLGDHVGHKVAVTGVVTNAKMHGMKEDAKDEAKEHGVATHSTEHGHMTVTNLSMVSESCQ
Ga0307471_1012073341	3300032180	Hardwood Forest Soil	GGKWDVKSDSVKLAPHVGHTVTVTGVVSNAAAHGAKEDVKDEAKEHGIAKNSTETGNLTVTTVKMVSDSCQQ
Ga0307471_1029734461	3300032180	Hardwood Forest Soil	VTVTGVVSNAKLHGMKEDAKAEAKEHGVDKDSTEHGHMTVTNLSMVSDTCKK
Ga0307471_1035824622	3300032180	Hardwood Forest Soil	VNLAEHVGHTVKITGVVSNAKMHGMKEDTKEEMKEHGMDKNSTEHGHLTVTNVDMVSDTC
Ga0348332_103692841	3300032515	Plant Litter	AKHVGHTVTVTSAVANAALHGAKEDTKAEAKEHGIDKSSTEHGHMTVTNLKMVSTSCEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097983

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences