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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F097987 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 104 |
| Average Sequence Length | 42 residues |
| Representative Sequence | DGVTLDVAGDRRRFGYAALGAGAVQVEFGHPQTELGATGDGH |
| Number of Associated Samples | 97 |
| Number of Associated Scaffolds | 104 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 99.04 % |
| % of genes from short scaffolds (< 2000 bps) | 98.08 % |
| Associated GOLD sequencing projects | 97 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.36 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (70.192 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (46.154 % of family members) |
| Environment Ontology (ENVO) | Unclassified (34.615 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (44.231 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 4.29% β-sheet: 17.14% Coil/Unstructured: 78.57% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.36 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 104 Family Scaffolds |
|---|---|---|
| PF08529 | NusA_N | 57.69 |
| PF13184 | KH_5 | 35.58 |
| PF04760 | IF2_N | 2.88 |
| PF04296 | YlxR | 1.92 |
| PF06574 | FAD_syn | 0.96 |
| PF02576 | RimP_N | 0.96 |
| COG ID | Name | Functional Category | % Frequency in 104 Family Scaffolds |
|---|---|---|---|
| COG2740 | Nucleoid-associated protein YlxR, Predicted RNA-binding, DUF448 family | General function prediction only [R] | 1.92 |
| COG0196 | FAD synthase | Coenzyme transport and metabolism [H] | 0.96 |
| COG0779 | Ribosome maturation factor RimP | Translation, ribosomal structure and biogenesis [J] | 0.96 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 70.19 % |
| All Organisms | root | All Organisms | 29.81 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 46.15% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 7.69% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 6.73% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 3.85% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 3.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.88% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 2.88% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 1.92% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.92% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 0.96% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.96% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 0.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.96% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.96% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.96% |
| Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 0.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.96% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.96% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.96% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.96% |
| Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.96% |
| Palsa | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa | 0.96% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.96% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 0.96% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.96% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 0.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.96% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.96% |
| Visualization |
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2124908007 | Soil microbial communities from sample at FACE Site Metagenome WIR_ElevOz2 | Environmental | Open in IMG/M |
| 3300001661 | Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly) | Environmental | Open in IMG/M |
| 3300002914 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm | Environmental | Open in IMG/M |
| 3300003368 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 | Environmental | Open in IMG/M |
| 3300004594 | Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
| 3300006047 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 | Environmental | Open in IMG/M |
| 3300006172 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014 | Environmental | Open in IMG/M |
| 3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
| 3300010154 | Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300011071 | Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome) (version 2) | Environmental | Open in IMG/M |
| 3300011072 | Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 48 (Metagenome Metatranscriptome) (version 2) | Environmental | Open in IMG/M |
| 3300012407 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012483 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610 | Host-Associated | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014489 | Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG | Environmental | Open in IMG/M |
| 3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
| 3300016404 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 | Environmental | Open in IMG/M |
| 3300017942 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3 | Environmental | Open in IMG/M |
| 3300017959 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG | Environmental | Open in IMG/M |
| 3300017970 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
| 3300018060 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG | Environmental | Open in IMG/M |
| 3300018090 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
| 3300021086 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300021171 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M | Environmental | Open in IMG/M |
| 3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
| 3300021402 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O | Environmental | Open in IMG/M |
| 3300021404 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O | Environmental | Open in IMG/M |
| 3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
| 3300021418 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2 | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300022528 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022531 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022714 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300023547 | Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA4 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300024055 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6 | Environmental | Open in IMG/M |
| 3300025527 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes) | Environmental | Open in IMG/M |
| 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026277 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026308 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes) | Environmental | Open in IMG/M |
| 3300026872 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes) | Environmental | Open in IMG/M |
| 3300026998 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes) | Environmental | Open in IMG/M |
| 3300027061 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027110 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes) | Environmental | Open in IMG/M |
| 3300027174 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes) | Environmental | Open in IMG/M |
| 3300027334 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027727 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027765 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes) | Environmental | Open in IMG/M |
| 3300027910 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes) | Environmental | Open in IMG/M |
| 3300027911 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes) | Environmental | Open in IMG/M |
| 3300028065 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26 | Environmental | Open in IMG/M |
| 3300028781 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3 | Environmental | Open in IMG/M |
| 3300028789 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3 | Environmental | Open in IMG/M |
| 3300028801 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3 | Environmental | Open in IMG/M |
| 3300028871 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1 | Environmental | Open in IMG/M |
| 3300029951 | III_Palsa_N1 coassembly | Environmental | Open in IMG/M |
| 3300030053 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2 | Environmental | Open in IMG/M |
| 3300030490 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3 | Environmental | Open in IMG/M |
| 3300030531 | Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030578 | Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO105-VCO054SO (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030618 | II_Palsa_E3 coassembly | Environmental | Open in IMG/M |
| 3300030740 | Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly | Environmental | Open in IMG/M |
| 3300031122 | Oak Spring Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031564 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21 | Environmental | Open in IMG/M |
| 3300031681 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20 | Environmental | Open in IMG/M |
| 3300031682 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22 | Environmental | Open in IMG/M |
| 3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
| 3300031747 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22 | Environmental | Open in IMG/M |
| 3300031748 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22 | Environmental | Open in IMG/M |
| 3300031751 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24 | Environmental | Open in IMG/M |
| 3300031769 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24 | Environmental | Open in IMG/M |
| 3300031770 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17 | Environmental | Open in IMG/M |
| 3300031777 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24 | Environmental | Open in IMG/M |
| 3300031779 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22 | Environmental | Open in IMG/M |
| 3300031781 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20 | Environmental | Open in IMG/M |
| 3300031796 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24 | Environmental | Open in IMG/M |
| 3300031797 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23 | Environmental | Open in IMG/M |
| 3300031805 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23 | Environmental | Open in IMG/M |
| 3300031821 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20 | Environmental | Open in IMG/M |
| 3300031845 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18 | Environmental | Open in IMG/M |
| 3300031880 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25 | Environmental | Open in IMG/M |
| 3300031894 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18 | Environmental | Open in IMG/M |
| 3300031941 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080 | Environmental | Open in IMG/M |
| 3300032008 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18 | Environmental | Open in IMG/M |
| 3300032009 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19 | Environmental | Open in IMG/M |
| 3300032051 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26 | Environmental | Open in IMG/M |
| 3300032052 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19 | Environmental | Open in IMG/M |
| 3300032054 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23 | Environmental | Open in IMG/M |
| 3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
| 3300032065 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20 | Environmental | Open in IMG/M |
| 3300032089 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23 | Environmental | Open in IMG/M |
| 3300032094 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25 | Environmental | Open in IMG/M |
| 3300032892 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5 | Environmental | Open in IMG/M |
| 3300034163 | Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| FWIRElOz_03364060 | 2124908007 | Soil | VTLDVAGDHRRFGYAALGAGAIQVEFGHPQTELGATGDGH |
| JGI12053J15887_102447762 | 3300001661 | Forest Soil | DVAGDHRRFGYAALGAGAIQVEFGHPQTELGATGDGH* |
| JGI25617J43924_103423222 | 3300002914 | Grasslands Soil | EGVTLDVGGARRRFDYAALGAGAVQVEFGHPQTELGATRDGH* |
| JGI26340J50214_100467592 | 3300003368 | Bog Forest Soil | RVVAADSDGVTLDVEGARRRFGYPALGVGAVQVEFGHLQPELGATRDGH* |
| Ga0068976_12275252 | 3300004594 | Peatlands Soil | AADTDGVTLDVEGTRHRFGYPALGAGAIQVEFGPPQPELGATRDGH* |
| Ga0070762_103777551 | 3300005602 | Soil | ADADGVTLDVEGDPKTRRLPYAALGPGAIQVEFGHPPTELGATRDGH* |
| Ga0075024_1003358571 | 3300006047 | Watersheds | DVGEARRRFGYAALGAGAVQVEFGHPQTELGATRDGH* |
| Ga0075018_101292922 | 3300006172 | Watersheds | VTLEVGEARRRFGYAALGAGAVQVEFGHPQTELGATRDGH* |
| Ga0099830_109609051 | 3300009088 | Vadose Zone Soil | DSDGVTLDVGDDPKTRRRFGYAALSAGAVQVEFGHPQTELGATGDGH* |
| Ga0127503_110779132 | 3300010154 | Soil | AGDRRRFGYAALGAGAVQVEFGHPHTELGATGDGH* |
| Ga0138595_10726821 | 3300011071 | Peatlands Soil | LDVEGDPKTRRRFPYAALGPGAIQVEFGHPPSEVGATGDGH* |
| Ga0138563_11608441 | 3300011072 | Peatlands Soil | PDGVTLDVEGARRRFGYRALGAGAVQVEFGHPQPELGATRDGH* |
| Ga0134050_13704521 | 3300012407 | Grasslands Soil | ADADGVTLDVAGDHRRFGYAALGAGAIQVEFGHPQTELGATGDGH* |
| Ga0157337_10262732 | 3300012483 | Arabidopsis Rhizosphere | LAADSDGVTLEVAGDHRRFGYAALGAGAIQVEFGHPQTELGATGDGH* |
| Ga0164301_108315722 | 3300012960 | Soil | VAGDHRRFGYAALGAGAIQVEFGHPQTELGATGDGY* |
| Ga0163163_104207232 | 3300014325 | Switchgrass Rhizosphere | VTLEVAGDHRRFGYAALGAGAIQVEFGHPQTELGATGDGH* |
| Ga0182018_105984041 | 3300014489 | Palsa | NPDGVILDVGGTRRRFRYPALGAGAIQVEFGPPQSELGATRDGH* |
| Ga0182034_107447162 | 3300016371 | Soil | LDVDGDPNARRRFPYAVLGPGAIQVEFGHPPTELGATRDGY |
| Ga0182037_104323781 | 3300016404 | Soil | EVTLDVEGDPKTRRRFPYSVLGPGAIQVEFGHPPSELGATGDGH |
| Ga0187808_100894551 | 3300017942 | Freshwater Sediment | DVEGDPKTRRRFPYDVLGPGAIQVEFGHPPTELGATRDGH |
| Ga0187779_110069681 | 3300017959 | Tropical Peatland | DGVTLDVEGDPKTRRRFPYTMLGPGAIQAEFGHPPSELGATGDGH |
| Ga0187783_105279171 | 3300017970 | Tropical Peatland | VEGARRRFPYAVLGPGAIQVEFGHPPSELGATGDGH |
| Ga0187765_107063032 | 3300018060 | Tropical Peatland | VAGDRRRFGYATLGAGAVQVEFGHPRTELGATGDGH |
| Ga0187770_110142492 | 3300018090 | Tropical Peatland | ADGVTLDVEGDPKTRRRFAYAVLGSGAIQVEFGHPPSELGATGDGH |
| Ga0179596_105106922 | 3300021086 | Vadose Zone Soil | DVAGDHRRFGYAALGAGAVQVEFGHPQTELGATGDGH |
| Ga0210405_105414022 | 3300021171 | Soil | VAADLDGVTLDVEGARRRFGYPALGAGAVQVEFGPPQPELGATRDGH |
| Ga0210396_114486172 | 3300021180 | Soil | TLDVGGSRHRFGYPALGAGVVQVEFGHPQPELGATRDGH |
| Ga0210385_108313952 | 3300021402 | Soil | GVTLDVEGARRRFAYGVLGAGAVQVEFGHPQAELGATGDGH |
| Ga0210389_115128741 | 3300021404 | Soil | DVEGSRHRFGYPALGAGVVQVEFGHPQPELGATRDGH |
| Ga0210387_108708121 | 3300021405 | Soil | VTLDVEGARRRFPYAVLGPGAIQVEFGHPPSELGATGDGH |
| Ga0193695_10501791 | 3300021418 | Soil | ADADGVTLDVAGDHRRFGYAALGAGAIQVEFGHPQTELGATGDGH |
| Ga0210410_114557292 | 3300021479 | Soil | VILESGEVRRRFGYAALGAGAVQVEFGHPQTELGATRDGH |
| Ga0242669_10268172 | 3300022528 | Soil | AAADADGVTLDVEGARRRFPYAVLGPGAIQVEFGHPPSELGATGDGH |
| Ga0242660_11959382 | 3300022531 | Soil | DGVTLDVAGDRRRFGYAALGAGAVQVEFGHPQTELGATGDGH |
| Ga0242671_10561762 | 3300022714 | Soil | ADGVTLDVDGARRRFPYAVLGAGAIQVEFGHPPSEPGATRDGH |
| Ga0247554_1020142 | 3300023547 | Soil | GGSLDVGGSRHRFGYPALGAGAVQVEFGHPQPELGATRDGH |
| Ga0247794_101536102 | 3300024055 | Soil | TLDVAGDHRRFGYAALGAGAIQVEFGHPQTELGATGDGH |
| Ga0208714_10633122 | 3300025527 | Arctic Peat Soil | VVAADSDGVTLDVEGTRRRIGYPALGAGTVQVEFGHPHPHPQPELGATSDGH |
| Ga0207710_101539542 | 3300025900 | Switchgrass Rhizosphere | SDGVTLDVAGDHRRFGYAALGAGAIQVEFGHPQTELGATGDGH |
| Ga0207649_100565463 | 3300025920 | Corn Rhizosphere | AGDHRRFGYAALGAGAVQVEFGHPQTELGATGDGH |
| Ga0207702_113563021 | 3300026078 | Corn Rhizosphere | ADLDGVTMDIGGDRRRFGYAALGAGTVQVEFGHPQTELGATSDGH |
| Ga0209350_10831071 | 3300026277 | Grasslands Soil | DVAGDRRRFGYAALGAGAIQVEFGHPHTELGATGDGH |
| Ga0209265_11872791 | 3300026308 | Soil | VGGDHRRFGYATLGAGAVQVEFGHPQTELGATRDGH |
| Ga0207785_10071952 | 3300026872 | Tropical Forest Soil | GVTLDVEDDPKARRRFPYAVLGPGAIQVEFGHPPTELGATRDGH |
| Ga0208369_10010793 | 3300026998 | Forest Soil | GVTLDVEGARRRFPYAVLGAGTIQVEFGHPPSELGATGDGH |
| Ga0209729_10160591 | 3300027061 | Forest Soil | RVAAADADGVTLDIEGARRRFPYAVLGPGAIQLEFGHPPSELGATGDGH |
| Ga0208488_10505611 | 3300027110 | Forest Soil | SAADIDGVTLEVEGARRRFPYAALGAGAIQVEFGHPPNELGATGDGH |
| Ga0207948_10150561 | 3300027174 | Forest Soil | VAADSDGVTLDVEGARRRFGYPALGAGAVQVEFGPPQPELGATRDGH |
| Ga0209529_10666872 | 3300027334 | Forest Soil | GRIVSADPDGVTLDIEGDQETRRFGYAVLGAGAIQVEFGHLPTELGATRDGH |
| Ga0209328_100780191 | 3300027727 | Forest Soil | VGGARRRFGYAALGAGAVQVEFGHPQTELGATRDGH |
| Ga0209073_104650361 | 3300027765 | Agricultural Soil | IGGDRRRFGYAALGAGTVQVEFGHPQTELGATSDGH |
| Ga0209583_104605661 | 3300027910 | Watersheds | VVAADSDEVTLEVGEARRRFGYAALGAGAVQVEFGHPRTELGATGDGH |
| Ga0209698_111809331 | 3300027911 | Watersheds | DGVTLDVQDDPKTRRRFAYAVLGPGAIQVEFGHPPSELGATGDGH |
| Ga0247685_10266322 | 3300028065 | Soil | VTLDVAGDHRRFGYAALSAGAIQVEFGHPQTELGATGDGH |
| Ga0302223_101817561 | 3300028781 | Palsa | VSADPDGVTLDIENEQKTRRRFGYAVLGAGAIQVEFGHLPTELGATRDGH |
| Ga0302232_102972641 | 3300028789 | Palsa | GVTLDIEGEQKTRRRFGYAVLGAGAIQVEFGHLPTELGATRDGH |
| Ga0302226_100501422 | 3300028801 | Palsa | DGVTLDIEDEQETRRRFNYAVLGAGAIQVEFGHLPTELGATRDGH |
| Ga0302230_102042391 | 3300028871 | Palsa | DIEGDQKTRRRFGYALLGAGAIQVEFGHLPTELGATRDGH |
| Ga0311371_105078491 | 3300029951 | Palsa | IVSADQEGVTLDIGGARRHFPYAVLGAGAIQVEFGHPQSELGATGDGH |
| Ga0302177_105572882 | 3300030053 | Palsa | PEGVTLDVGGARRHFPYAVLGAGAIQVEFGHPQTELGATGDGH |
| Ga0302184_100011641 | 3300030490 | Palsa | VTLDVEGARRLFPHAVLGPGAIQVEFGHPPSELGATGDGH |
| Ga0210274_16353302 | 3300030531 | Soil | VEGARRRFAYGALGAGAVQVEFGHPQAELGATGDGH |
| Ga0210274_16937451 | 3300030531 | Soil | GVILEAGEVRRRFAYAALGAGAVQVEFGHPQTELGATRDGH |
| Ga0210275_101941072 | 3300030578 | Soil | FFASLDVEGARRRFPYAALGPGAIQVEFGHPPNELGATGDGH |
| Ga0311354_118947961 | 3300030618 | Palsa | VAAADADGVTLDVEGARRQFPHAVLGPGAIQVEFGHPPSELGATGDGH |
| Ga0265460_115905701 | 3300030740 | Soil | DSDGVTLDVEGSRHRFGYPALGAGAVQVEFGHPQPELGATRDGH |
| Ga0170822_153399812 | 3300031122 | Forest Soil | VTLDVEGSRHRFGYPALGAGAVQVEFGHPQPELGATRDGH |
| Ga0318573_100534044 | 3300031564 | Soil | TLDVVDDPKARRRFPYAALGPGAVQVEFGHPPTELGATRDGH |
| Ga0318573_107444781 | 3300031564 | Soil | SDGVILDVAGDRHRFGYAALGAGAVQVEFGHPQTELGATGDGH |
| Ga0318572_101821082 | 3300031681 | Soil | AADADGVTLDVVDDPKARRRFPYAALGPGAVQVEFGHPPTELGATRDGH |
| Ga0318560_106595182 | 3300031682 | Soil | GVTLDVEGDPKTRRRFPYAVLGPGAIQVEFGHPPSELGATGDGY |
| Ga0307476_103526731 | 3300031715 | Hardwood Forest Soil | DPKTRRRFPYAVLGPGAIQVEFGHPPTELGATRDGH |
| Ga0318502_101876361 | 3300031747 | Soil | DGVTLDVEDDPKARRRFPYAALGPGAVQVEFGHPPTELGATRDGH |
| Ga0318492_100525501 | 3300031748 | Soil | PKTRRRFPYSALGPGAIQVEFGHPPSELGATGDGH |
| Ga0318492_101423321 | 3300031748 | Soil | TLDVEDDPKARRRFPYAALGPGAVQVEFGHPPTELGATRDGH |
| Ga0318492_107429062 | 3300031748 | Soil | GVTLDVEGDPKTRRRFPYAVLGPGAVQVEFGHPPTELGATRDGH |
| Ga0318494_107041141 | 3300031751 | Soil | ADGDGVTLDVEGDPKIRRRLPYALLGPGAIQVEFGHPPSELGATGDGH |
| Ga0318526_100495153 | 3300031769 | Soil | DADGVTLDVAGDRRRFGYAALGAGAVQVEFGHPHTELGATGDGH |
| Ga0318521_106056881 | 3300031770 | Soil | AVGVTLDVEGARRRYAYAGLGPGAVQVEFGHPPSELGATGDGH |
| Ga0318543_104036562 | 3300031777 | Soil | LDVEGARRRFPYAVLGPGAIQVEFGHPPNELGATGDGH |
| Ga0318566_101192112 | 3300031779 | Soil | DVVDDPKARRRFPYAALGPGAVQVEFGHPPTELGATRDGH |
| Ga0318547_100832713 | 3300031781 | Soil | VTLDVEDDPKARRRFPYAALGPGAVQVEFGHPPTELGATRDGH |
| Ga0318576_100973931 | 3300031796 | Soil | VTLDMAGDHRRFGYAALGAGAVQVEFGHPHTELGATGDGH |
| Ga0318550_102093721 | 3300031797 | Soil | GDPNARRRFPYAVLGPGAIQVEFGHPPTELGATRDGY |
| Ga0318497_100897201 | 3300031805 | Soil | LDVEGARRRFPCTMLGPGAIQVEFGHPPSELGATGDGH |
| Ga0318497_101775911 | 3300031805 | Soil | ADGVTLDVEDDPKARRRFPYAALGPGAVQVEFGHPPTELGATRDGH |
| Ga0318567_104510251 | 3300031821 | Soil | GADADGVTLDVAGDRRRFGYAALGAGAVQVEFGHPHTELGATGDGH |
| Ga0318511_103949081 | 3300031845 | Soil | VAGDRRRFGYDALGAGAVQVEFGHPHTELGATGDGH |
| Ga0318544_102961382 | 3300031880 | Soil | ILNVAGDRRRFGYAALGAGAVQVEFGHPRTELGATGDGH |
| Ga0318522_103442272 | 3300031894 | Soil | VTLDVEGARRRFPYSVLGPGAIEVEFGHPPSELGATGDGH |
| Ga0310912_111489201 | 3300031941 | Soil | ADSDGVILDVAGDRHRFGYAALGAGAVQVEFGHPQTELGATGDGH |
| Ga0318562_101161651 | 3300032008 | Soil | PKTRRRFPYSVLGPGAIQVEFGHPPSELGATGDGH |
| Ga0318563_100644331 | 3300032009 | Soil | VEGDPKTRRRFPYSVLGPGAIQVEFGHPPSELGATGDGH |
| Ga0318563_103419962 | 3300032009 | Soil | VILDVAGDRRRFGYATLGAGAVQVEFGRPHTELGATGDGH |
| Ga0318532_102171302 | 3300032051 | Soil | DPKTRRFPYALLGPGAIQVEFGHPPSELGATGDGH |
| Ga0318506_102267491 | 3300032052 | Soil | VILDVAGDRRRFGYAALGAGAVQVEFGHPHTELGATGDGH |
| Ga0318570_100950832 | 3300032054 | Soil | PKTRRRFPYAVLGPAAIQVEFGHPPNELGATGDGH |
| Ga0318533_110911501 | 3300032059 | Soil | VEGARRRFPYSVLGPGAIEVEFGHPPSELGATGDGH |
| Ga0318513_104030822 | 3300032065 | Soil | AADSDGVILDVAGDRRRFGYDALGAGAVQVEFGHPHTELGATGDGH |
| Ga0318525_105507012 | 3300032089 | Soil | VLAADSDGVILDVAGDRHRFGYAALGAGAVQVEFGHPQTELGATGDGH |
| Ga0318525_106521461 | 3300032089 | Soil | IEGARRRFGYAALGAGAVQVEFGHPQTELGAIRDGH |
| Ga0318540_100919962 | 3300032094 | Soil | IAAADADGVTLDVVDDPKARRRFPYAALGPGAVQVEFGHPPTELGATRDGH |
| Ga0335081_111693091 | 3300032892 | Soil | RVVSADAEGVTLDVEGARRRFSYAALGAGAIQVEFGRSPTELGVTRDGH |
| Ga0370515_0066298_2_133 | 3300034163 | Untreated Peat Soil | GVTLDVDGDPKPRRLGYAALGPGAIQVEFGHLPTELGATRDGH |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |