Metagenome / Metatranscriptome Family F097997

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097997
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	109 residues
Representative Sequence	MRLCRILAILGLMAALSLPAAASAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGSR
Number of Associated Samples	80
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	92.31 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	95.19 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (96.154 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (30.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.577 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 13.53% β-sheet: 27.82% Coil/Unstructured: 58.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02018	CBM_4_9	41.35
PF03061	4HBT	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.15 %
All Organisms	root	All Organisms	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.15 %
cellular organisms	root	All Organisms → cellular organisms	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.15 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.15 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.15 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.15 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.15 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_100033853	Not Available	1034	Open in IMG/M
3300003373\|JGI25407J50210_10068817	Not Available	884	Open in IMG/M
3300003373\|JGI25407J50210_10092031	Not Available	750	Open in IMG/M
3300003373\|JGI25407J50210_10123628	Not Available	637	Open in IMG/M
3300004463\|Ga0063356_102475645	Not Available	795	Open in IMG/M
3300005937\|Ga0081455_10370566	Not Available	1004	Open in IMG/M
3300005937\|Ga0081455_10399825	Not Available	954	Open in IMG/M
3300005981\|Ga0081538_10262975	Not Available	650	Open in IMG/M
3300005985\|Ga0081539_10157995	Not Available	1084	Open in IMG/M
3300006169\|Ga0082029_1757094	Not Available	738	Open in IMG/M
3300006576\|Ga0074047_10462710	Not Available	537	Open in IMG/M
3300006845\|Ga0075421_100114712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3385	Open in IMG/M
3300006852\|Ga0075433_10614868	Not Available	953	Open in IMG/M
3300006880\|Ga0075429_100464820	Not Available	1108	Open in IMG/M
3300009100\|Ga0075418_12424180	Not Available	572	Open in IMG/M
3300009100\|Ga0075418_12677060	Not Available	545	Open in IMG/M
3300009147\|Ga0114129_11834989	Not Available	737	Open in IMG/M
3300009148\|Ga0105243_12056257	Not Available	606	Open in IMG/M
3300009809\|Ga0105089_1020594	Not Available	889	Open in IMG/M
3300009840\|Ga0126313_10587669	Not Available	896	Open in IMG/M
3300010038\|Ga0126315_10396908	Not Available	866	Open in IMG/M
3300010038\|Ga0126315_10526958	Not Available	756	Open in IMG/M
3300010041\|Ga0126312_10384293	Not Available	997	Open in IMG/M
3300010041\|Ga0126312_10906927	Not Available	642	Open in IMG/M
3300010041\|Ga0126312_11236645	Not Available	551	Open in IMG/M
3300010041\|Ga0126312_11408418	Not Available	517	Open in IMG/M
3300010042\|Ga0126314_10037643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3073	Open in IMG/M
3300010044\|Ga0126310_10055755	Not Available	2217	Open in IMG/M
3300010044\|Ga0126310_10694881	Not Available	770	Open in IMG/M
3300010045\|Ga0126311_10304087	Not Available	1201	Open in IMG/M
3300010145\|Ga0126321_1285770	Not Available	537	Open in IMG/M
3300010166\|Ga0126306_11118466	Not Available	645	Open in IMG/M
3300011000\|Ga0138513_100038665	Not Available	709	Open in IMG/M
3300011000\|Ga0138513_100046387	Not Available	655	Open in IMG/M
3300014487\|Ga0182000_10116002	Not Available	922	Open in IMG/M
3300014487\|Ga0182000_10465984	Not Available	578	Open in IMG/M
3300014488\|Ga0182001_10359909	Not Available	616	Open in IMG/M
3300017997\|Ga0184610_1080989	Not Available	1006	Open in IMG/M
3300018028\|Ga0184608_10374260	Not Available	622	Open in IMG/M
3300018073\|Ga0184624_10368487	Not Available	642	Open in IMG/M
3300018076\|Ga0184609_10171928	Not Available	1003	Open in IMG/M
3300018432\|Ga0190275_11899761	Not Available	674	Open in IMG/M
3300018466\|Ga0190268_10031438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1888	Open in IMG/M
3300018466\|Ga0190268_10997582	Not Available	666	Open in IMG/M
3300018466\|Ga0190268_11927617	Not Available	539	Open in IMG/M
3300019255\|Ga0184643_1078752	Not Available	504	Open in IMG/M
3300019377\|Ga0190264_12044848	Not Available	527	Open in IMG/M
3300019767\|Ga0190267_10934033	Not Available	599	Open in IMG/M
3300021951\|Ga0222624_1170202	Not Available	1005	Open in IMG/M
3300022195\|Ga0222625_1577233	Not Available	786	Open in IMG/M
3300022195\|Ga0222625_1640288	Not Available	1432	Open in IMG/M
3300022534\|Ga0224452_1254287	Not Available	537	Open in IMG/M
3300026672\|Ga0208214_103056	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300026790\|Ga0208710_102460	Not Available	934	Open in IMG/M
3300027523\|Ga0208890_1032926	Not Available	786	Open in IMG/M
3300027718\|Ga0209795_10163293	Not Available	627	Open in IMG/M
3300027750\|Ga0209461_10032281	Not Available	1002	Open in IMG/M
3300027750\|Ga0209461_10059586	Not Available	795	Open in IMG/M
3300027907\|Ga0207428_11189442	Not Available	531	Open in IMG/M
3300028705\|Ga0307276_10132826	Not Available	623	Open in IMG/M
3300028708\|Ga0307295_10088930	Not Available	825	Open in IMG/M
3300028712\|Ga0307285_10021971	Not Available	1476	Open in IMG/M
3300028716\|Ga0307311_10154174	Not Available	662	Open in IMG/M
3300028717\|Ga0307298_10116014	Not Available	766	Open in IMG/M
3300028718\|Ga0307307_10049219	Not Available	1231	Open in IMG/M
3300028719\|Ga0307301_10208845	Not Available	634	Open in IMG/M
3300028721\|Ga0307315_10058882	Not Available	1081	Open in IMG/M
3300028754\|Ga0307297_10350100	Not Available	540	Open in IMG/M
3300028755\|Ga0307316_10074345	Not Available	1164	Open in IMG/M
3300028755\|Ga0307316_10147975	Not Available	836	Open in IMG/M
3300028791\|Ga0307290_10369946	Not Available	524	Open in IMG/M
3300028793\|Ga0307299_10105641	Not Available	1053	Open in IMG/M
3300028799\|Ga0307284_10044429	Not Available	1541	Open in IMG/M
3300028809\|Ga0247824_10457461	Not Available	747	Open in IMG/M
3300028878\|Ga0307278_10316712	Not Available	689	Open in IMG/M
3300028880\|Ga0307300_10146522	Not Available	740	Open in IMG/M
3300028881\|Ga0307277_10230003	Not Available	816	Open in IMG/M
3300030516\|Ga0268255_10088364	Not Available	943	Open in IMG/M
3300030903\|Ga0308206_1202507	Not Available	504	Open in IMG/M
3300030905\|Ga0308200_1094901	Not Available	627	Open in IMG/M
3300031114\|Ga0308187_10285654	Not Available	613	Open in IMG/M
3300031548\|Ga0307408_100630186	Not Available	956	Open in IMG/M
3300031548\|Ga0307408_100693554	Not Available	914	Open in IMG/M
3300031731\|Ga0307405_10216054	Not Available	1403	Open in IMG/M
3300031731\|Ga0307405_10288838	Not Available	1238	Open in IMG/M
3300031731\|Ga0307405_10929554	Not Available	737	Open in IMG/M
3300031731\|Ga0307405_11299107	Not Available	633	Open in IMG/M
3300031824\|Ga0307413_11133942	Not Available	677	Open in IMG/M
3300031852\|Ga0307410_11392089	Not Available	615	Open in IMG/M
3300031901\|Ga0307406_10056130	Not Available	2520	Open in IMG/M
3300031903\|Ga0307407_10065232	Not Available	2143	Open in IMG/M
3300031903\|Ga0307407_10215667	Not Available	1295	Open in IMG/M
3300031995\|Ga0307409_100560634	Not Available	1123	Open in IMG/M
3300031995\|Ga0307409_101353078	Not Available	738	Open in IMG/M
3300032002\|Ga0307416_101648205	Not Available	746	Open in IMG/M
3300032002\|Ga0307416_102991975	Not Available	565	Open in IMG/M
3300032004\|Ga0307414_10764491	Not Available	879	Open in IMG/M
3300032005\|Ga0307411_10816287	Not Available	822	Open in IMG/M
3300032159\|Ga0268251_10058341	Not Available	1285	Open in IMG/M
3300032159\|Ga0268251_10308423	Not Available	659	Open in IMG/M
3300032205\|Ga0307472_102552931	Not Available	520	Open in IMG/M
3300033551\|Ga0247830_10982282	Not Available	673	Open in IMG/M
3300034377\|Ga0334931_039694	Not Available	1031	Open in IMG/M
3300034402\|Ga0334960_045044	Not Available	611	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.50%
Host-Associated	Host-Associated	37.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.88%
Plants	Host-Associated → Plants	37.50%
Aquatic	Environmental → Aquatic	9.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.04%
Freshwater	Environmental → Aquatic → Freshwater	4.81%
Sediment	Environmental → Aquatic → Sediment	4.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.85%
Roots	Host-Associated → Plants → Roots	3.85%
Phylloplane	Host-Associated → Plants → Phylloplane	3.85%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.92%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	24.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.81%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.85%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.85%
Loam	Environmental → Terrestrial → Soil → Loam	2.88%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.92%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.96%
Sand	Environmental → Terrestrial → Soil → Sand	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	24.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.88%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.92%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.96%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	16.35%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	11.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.81%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	3.85%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.88%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.88%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.92%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.92%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.92%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300026672	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1102 (SPAdes)	Environmental	Open in IMG/M
3300026790	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN607 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034402	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TB_1000338532	3300001431	Soil	MRLRRIVAIFVVAAALSLPAAASAAESKRHIGLHDMTCTSITAMGKGLAPNASMQLTLTDRDNGSTLAGQSVRTSAKGEFMAKL
JGI25407J50210_100688172	3300003373	Tabebuia Heterophylla Rhizosphere	MRLCRILAVLGLAAALSLPAAASAAETRNHVGLHDMTCTSITAMGKGLAKSSAMQLTLTNRDNGSTLAGQTVRTSAKGDFMVKLPARLNKVLSIRLTVSRPDGAKVAFADHVMAXGAAM
JGI25407J50210_100920311	3300003373	Tabebuia Heterophylla Rhizosphere	MRLRRIVAVLGLAAALSLPAAASAAESKRHIGLHDMTCTGITAMGKGLAPNAAMQLTLTNRDNGRALAGQTVRTSAKGEFMAKLPARLNRVLSIRLTVSRPDGSKVAFADHVMA
JGI25407J50210_101236281	3300003373	Tabebuia Heterophylla Rhizosphere	MRLCRILAVLGLAAALSLPAAASAAETKSHVGLHDMTCTSITAMGKGLAENAAMELTLTNRDNGSTLAGQTVRTSAKGAFMVKLPARLNKVLSIRLTVSRPDGAKVAFADHVM
Ga0063356_1024756452	3300004463	Arabidopsis Thaliana Rhizosphere	MRLRRIVAVLGLAAALSLPAGASAAESKRHVGLHDMTCTSITAMGKGLAPDASMRLTLTDRDNGSILAGQSVRTSAKGEFMAQLPARLNKVLSIRLTVSRPD
Ga0081455_103705662	3300005937	Tabebuia Heterophylla Rhizosphere	MRLCRTVAIVGLMAALSLPAAASAESGHHVGLHDMTCTSITAMGKGMPRQAALQLTLTNRDTGGTLAGQTVRTSAKGEFMVELPARLNQVLSLRLTVSRPDGSKVAFADHVMAKGAPMCSLPFT
Ga0081455_103998251	3300005937	Tabebuia Heterophylla Rhizosphere	MRLCRILAVLGLAAALSLPAAASAAETRNHVGLHDMTCTSITAMGKGLAKNTAMQLTLTNRDNGSTLGGQTVRTSAKGDFMVKLPARLNKVLSVRLTVSR
Ga0081538_102629751	3300005981	Tabebuia Heterophylla Rhizosphere	MRLRRIVAVLGLAAALSPPAAASAADSKRHIGLHDMTCTSIMAMGKGLSPNAAMQLTLTNRDNGSTLAGQTVRTSAKGEFMVKLPARLNKVLSIRLTVSRADGSKVGFADHVMTRGAAMCNLPFTGPSRTTSM
Ga0081539_101579951	3300005985	Tabebuia Heterophylla Rhizosphere	MRLCRILAVVGLAAALSVPAAASAAETKSHVGLHDMTCTSITAMGKGLSPNAALDLKLTNRDNGSTLAGQTVRTSAKGDLMV
Ga0082029_17570942	3300006169	Termite Nest	MRLCRILAVLGLAAALSLPAAASAGETKSHVGLHDMTCTSITAMGKGLSANAALDLKLTNRDNGSTLAGQTVRTSAKGAFMVRLPARLN
Ga0074047_104627102	3300006576	Soil	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAELPARLNKVLSIRLTVSRPDGSRIAFADHVMAKGAAMCNLPFTGPSRSA
Ga0075421_1001147121	3300006845	Populus Rhizosphere	MRLRRIVAIFVVAAALSLPAAASAAESKRHIGLHDMTCTSITAMGKGLAPDASMRLTLTDRDNGGTLAGQNVRTSAKGEFMAKLPA
Ga0075433_106148681	3300006852	Populus Rhizosphere	MRLRRIVAIFVVAAALSLPAAASAAESKRHIGLHDMTCTSITAMGKGLAPDASMRLTLTDRDNGGTLAGQNVRTSAKGEFMAKLPARLNKVLSIRLTVSR
Ga0075429_1004648201	3300006880	Populus Rhizosphere	MRVCRIVAVLGLLAALSLPAAASAAETKQHVGLHDMTCTGITAMGKGLPADSAMQLTLTNRDDGSTLAGQTVRTSAKGEFMTKLPARLNKVLSIRLTVSRSDGRKVAFADHTMAM
Ga0075418_124241801	3300009100	Populus Rhizosphere	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMTKLPARLNKVLSLRLTVSRSDGTKVAFADH
Ga0075418_126770601	3300009100	Populus Rhizosphere	MRLCRTVAIVGLMAALSLPAAASAESGHHVGLHDMTCTSITAMGKGMPRRAALQLTLTNRETGGTLAGQTVRTSATGEFMVELPARLNQVLSLRLTVSRPDGSKVAFADHVMAKGAPMCSLPFTGPSRSASL
Ga0114129_118349892	3300009147	Populus Rhizosphere	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAELPARLNKVLSIRLTVSRPDGSRIAFADHVMAKGAAMC
Ga0105243_120562571	3300009148	Miscanthus Rhizosphere	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAELPARLNKVLSIRLTVSRPDGSRIAFADHVMAKGAAMCNLPFTGPSRSAS
Ga0105089_10205943	3300009809	Groundwater Sand	MRLCRALAALGLAAALSLPAAAAAGQEQQQHFGLHDMTCTSIMAMGKGLSANASMQLTLVNRDNGSTLAGQTVRTSAKGEFMVKLPARLNQVLSIRLTVSRPDGTKVGFADHVMAKGAAMCDLPFTGPS
Ga0126313_105876691	3300009840	Serpentine Soil	MRLCRILAVLGLLAALSVPAAASAAETKSHVGLHDMTCTSITAMGKGLAPNAALDLKLTNPDNGGTLAGQTVRTSAEGEFMVKLPARLNQVLSIRLTVSRPDGTK
Ga0126315_103969081	3300010038	Serpentine Soil	MTSMRLRRIVAITGLAAALSLPAAASAADSKRHIGLHDMTCTSITAMGKGLAPNASMQLTLTNRDNGSTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGSKIAFADHVMAKGAAMCNLPFTGPSRVAAL
Ga0126315_105269581	3300010038	Serpentine Soil	MTSMRLRRIVAVLGLAAALSLPAAASAESKRHVGLHDMTCTSIMAMGKGLAPDAAVQLTLTDRDNGTTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGSK
Ga0126312_103842931	3300010041	Serpentine Soil	MRLRRILAVLGLVAALSLPAAASAAETKSHVGLHDMTCTSITAMGKGLSPNAALDLKLTDRDNGGSLAGQTVRTSAKGEFMVKLPARLNRVLSIRLTVSRPDGTKVAFA
Ga0126312_109069271	3300010041	Serpentine Soil	MRLCRILAVLGLLAALSVPAAASAAETKSHVGLHDMTCTSITALGKGLAPNAALDLKLTNPDNGGTLAGQTVRTSAKGEFMAK
Ga0126312_112366452	3300010041	Serpentine Soil	MTSMRLCRSLAILGLMAALSLPAAASAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTMAGQTVRTSAKGEFMAKLPARLNKVLSIRL
Ga0126312_114084182	3300010041	Serpentine Soil	MRLCGTLAILGLMAALSLPAAASAAEAKQHVGLHDMTCTSITAMGKGLPASTSVQLTLTNRDTGGTLAGQTVRTSAKGEFMAKL
Ga0126314_100376431	3300010042	Serpentine Soil	MRLCGTLAILGLMAALSLPAAASAAEAKQHVGLHDMTCTSITAMGKGLPASTSVQLTLTNRDTGGTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGSK
Ga0126310_100557553	3300010044	Serpentine Soil	MTSMRLCRILAILGLMAALSLPAAASAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTMAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGSRIAFADHVME
Ga0126310_106948811	3300010044	Serpentine Soil	MTSMRLRRIVAVLGLAAALSLPAAASAESKRHVGLHDMTCTSIMAMGKGLAPDAAVQLTLTDRDNGTTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTV
Ga0126311_103040873	3300010045	Serpentine Soil	MTSMRLRRIVAITGLAAALSLPAAASAADSKRHIGLHDMTCTSITAMGKGLAPNASMQLTLTNRDNGSTLAGQTVRTSAKGEFMAKLPARLNK
Ga0126321_12857701	3300010145	Soil	MTSMRLRRMVAVLGLAAALSLPAAASAESKRHIGLHDMTCTSIMAMGKGLAPDAAVRLTLTDRDNGTTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTV
Ga0126306_111184661	3300010166	Serpentine Soil	MRLCRIVAVLGLLAALSLPAAASAAETKQHVGLHDMTCTSIMAMGKGLAKNTAMQLTLTNRDNGSTLAGQSVRTSAKGEFMVKLPARLNKVLSIRLTVSRPD
Ga0138513_1000386652	3300011000	Soil	MTSMRLRRIVAVLGLAAALSLPAAASATESKRHIGLHDMTCTSIMAMGKGLSPNAAMQLTLTNRDNGSTLAGQTVRTSAKGEFMAKLPARLNKVLSIRL
Ga0138513_1000463871	3300011000	Soil	MTSMRLCRILAILGLMAALSLPAAASAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGSRIAFADHVMEMGAAMCNLPFTGPSRS
Ga0182000_101160022	3300014487	Soil	MTSMRLRRIVAVVGLAAALSLPAAASAAAPERHVGLHDMTCTSIMAMGKGLAPNATLQLTLTNRDNGSTLAGQTVRTSAKGDFMAKLPARLN
Ga0182000_104659842	3300014487	Soil	MRLCRLLAVLALAAALSLPAAASAAESKHHVGLHDMTCTSITAMGKGLPKSSSMQLTLSNRDTGATLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVTGSDGGKVAFADHVMAKGAAMCNLPFTG
Ga0182001_103599092	3300014488	Soil	MRLCRILAVLGLMAALSLPAAVSAAESKQHVGLHDMTCTSITAMGKGLPKSTAMQLTLTNKDTGGTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVTGPDGGKVAFADHVMAKGAAMC
Ga0184610_10809891	3300017997	Groundwater Sediment	MRLCRILAILGLMAALSLPAAASAAESKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTDRDTGGTLAGQTVRTSAKGEFMAELPARLNKVLSLRLTVSRPDGSRIAFADHVMAMGAAMCNLPFTGP
Ga0184608_103742601	3300018028	Groundwater Sediment	MRLCRILAILGLMAALSLPAAASAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGSRIAFADHVM
Ga0184624_103684871	3300018073	Groundwater Sediment	MRLCRIVAVLGLLAALSLPAAASAAETKQHVGLHDMTCTGITAMGKGLPANSAMQLTLTNRDDGSTLAGQTVRTSAKGQFMAKLPARLNKVLSIRLTVSRSDGRKVAFADHTMAMGAAMCNLPFT
Ga0184609_101719282	3300018076	Groundwater Sediment	MRLCRILAILGLMAALSLPAAASAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAKLP
Ga0190275_118997612	3300018432	Soil	MRLCRILAVLGLAAALSLPAAASAAETRNHVGLHDMTCTSITAMGKGLAKNSAMQLTLTNRANGSTLAGQTVRTSAKGDFMVKLPARLNKVLSLRLTVSRPDGAKVAFADHVMAKGAAMCNLPFTGP
Ga0190268_100314384	3300018466	Soil	MRLCRILAVLGLVAAVSLPAAASAAETKSHVGLHDMTCTSITAMGKGLSPNTALDLKLTNRDNGGTLAGQTVRTSAKGGFMVKLPARL
Ga0190268_109975822	3300018466	Soil	MRLCRILAILGLMAALSLPAAASAAESKHHVGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGTKI
Ga0190268_119276171	3300018466	Soil	MRLRRIVAITGLAAALSLPAAASAAESKRHVGLHDMTCTSIMAMGKGLSPNAAMQLTLTNRDNGSTLAGQTVRTSAKGEFMAKLPARLNKVLSLR
Ga0184643_10787522	3300019255	Groundwater Sediment	MRLCRILAVLGVLAALSLPAAASAAESRNHIGLHDMTCTSIMAMGKGLAPNASMQLTLTNRDNGSTLAGQTVRTSAKGEFMVKLPARLNQVLSIRLTVSRPDGSKI
Ga0190264_120448481	3300019377	Soil	MRPCRIVAMLGLAAALSLPTAAFATEHKQHIGLHDMTCTSITAMGKGFAKDASMRLTLVNRGTGGALAGQTVHTSAKGEFMAKLPARLNQVLSVRLTVSRPDGTKLGF
Ga0190267_109340332	3300019767	Soil	MRLCRIVAVLGLLAALSLPAAASADETKQHVGLHDMTCTGITAMGKGLPADSAMQLTLTNRDDGSTLAGQTVRTSAKGEFMAKLPARLNKVLSVRLTVSRADGRKVAFADHTMARGAAMCNLPFT
Ga0222624_11702021	3300021951	Groundwater Sediment	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAE
Ga0222625_15772332	3300022195	Groundwater Sediment	MRLCRIVAVLGLLAALSLPAAASAAETKQHVGLHDMTCTGITAMGKGLPANSAMQLTLTNRDDGSTLAGQTVRTSAKGEFMAKLPARLNKVLSIRL
Ga0222625_16402881	3300022195	Groundwater Sediment	MRLCRIVAILGLAAALSLPAAALAEQKQHIGLHDMTCTSIMAMGKGLSANASMQLTLVNRDNGSTLAGQTVRTSAKGEFMVKLPARLNQVLSIRLTVSRPDGTKVGFADHVMAKGAAMCDLPFTG
Ga0224452_12542871	3300022534	Groundwater Sediment	MRLCRIVAVLGLLAALSLPAAASAAETKQHVGLHDMTCTGITAMGKGLPADSAMQLTLTNRGDGSTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLT
Ga0208214_1030561	3300026672	Soil	MRLRRIVAVLGLAAALSLPAAASAESKRHIGLHDMTCTSIMAMGKGLAPNAAMQLTLTNRDNGTTLAGQTVRTSAEGAFMAKLPARLNKVLSIRLTVSR
Ga0208710_1024601	3300026790	Soil	MRLRRILAVLGLAAALSLPAAASAAESKRHIGLHDMTCTSITAMGKGLAPNASMQLTLTNRDSGSTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGTKIAFADH
Ga0208890_10329261	3300027523	Soil	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPQSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAELPARLNKVLSIRLTVSRPDGSRIAFADHVMAKGAAMCNLPFTGPSRSAS
Ga0209795_101632931	3300027718	Agave	MRLRRIVAVVGLAAALSLPAAASAAEAKRHIGLHDMTCTSITAMGKGLAPNASMQLTLTDRDDGSTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGSRIAFADHVMAKGAAMCNLPF
Ga0209461_100322811	3300027750	Agave	MRLRRIVAVVGLAAALSLPAAASAAAPERHVGLHDMTCTSIMAMGKGLAPNATLQLTLTNRDNGSTLAGQTVRTSAKGDFMAKLPARLNKVLSIRLTVSRPDGSKIAFADHVMAKGAPM
Ga0209461_100595861	3300027750	Agave	MRLRRILAVLGLAAALSLPAAASAAESKRHIGLHDMTCTSITAMGKGLAPNATMQLTLTDHDDGSTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGSRIAFADHVMAKGAAMC
Ga0207428_111894422	3300027907	Populus Rhizosphere	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEF
Ga0307276_101328261	3300028705	Soil	MRLCRILAVLGVLAALSLPAAASAAESRNHIGLHDMTCTSIMAMGKGLAPNASMQLTLTDRDNGSTLAGQTVRTSAKGEFMVKLPARLNQVLSIRLTVSRPDGSKV
Ga0307295_100889301	3300028708	Soil	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAELPARLNKVLSIRLTVSRPDGSRIAFADHVM
Ga0307285_100219713	3300028712	Soil	MRLCRILAILGLMAALSLPAAASAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGSRIAFADH
Ga0307311_101541742	3300028716	Soil	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPKSASMQLTLTNRDTGGTLAGQTVRTSAKGEFMAELPARLNKVLSIRLTVSRPDGSRIAFADH
Ga0307298_101160141	3300028717	Soil	MRLCRILAVLGVLAALSLPAAASAAESRNHIGLHDMTCTSIMAMGKGLAPNASMQLTLTDRDNGSTLAGQTVRTSAKGEFMVKLPARLNQVLSIRLTVSRPDGSKIGFADHAMAKGAAMCNLPFTGPSRTAS
Ga0307307_100492191	3300028718	Soil	MRLCRILAVLGVLAALSLPAAASAAESRNHIGLHDMTCTSIMAMGKGLAPNASMQLTLTDRDNGSTLAGQTVRTSAKGEFMVKLPAR
Ga0307301_102088451	3300028719	Soil	MRLCRILAVLGVLAALSLPAAASAAESRNHIGLHDMTCTSIMAMGKGLAPNASMQLTLTDRDNGSTLAGQTVRTSAKGEFMVKLPARLNQVLSIRLTVSRPDGSKVG
Ga0307315_100588822	3300028721	Soil	MRLRRIVAIFVLAAALSLPAAASAAESKRHVGLHDMTCTSITAMGKGLAPNASMQLTLTDRDNGSTLAGQSVRTSATGEFMAKLPARLNKVLSIRLTVSRPDGSKIAFADHVMAKGAAMCNLP
Ga0307297_103501002	3300028754	Soil	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAELPARLNKVLSIRLTVSRPDGSRIAFADHVKAKGAAMCNLPFTGPSRAA
Ga0307316_100743451	3300028755	Soil	MRLRRIVAIFVLAAALSLPAAASAAESKRHIGLHDMTCTSITAMGKGLAPNASMQLTLTDRDNGSTLAGQSVRTSATGEFMAKLPARLNKVLSIRLTV
Ga0307316_101479752	3300028755	Soil	MRLCRILAVLGVLAALSLPAAASAAESRNHIGLHDMTCTSIMAMGKGLAPNASMQLTLTNRDNGSTLAGQTVRTSAKGEFMVKLPARLNQVLSIRLTVSRPD
Ga0307290_103699462	3300028791	Soil	MRLCRILAILGLMAALSLPAAASAAESKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGSRIAFADHVMEMGAAMC
Ga0307299_101056411	3300028793	Soil	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAELPARLNKVLSIRLTVSRPDGSRIAF
Ga0307284_100444291	3300028799	Soil	MRLCRILAVLGVLAALSLPAAASAAESRNHIGLHDMTCTSIMAMGKGLAPNASMQLTLTDRDNGSTLAGQTVRTSAKGEFMVKLPARLNQVLSIRLTVSRPDGSKIGFADHTMAKGAPM
Ga0247824_104574612	3300028809	Soil	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAELPA
Ga0307278_103167121	3300028878	Soil	MRLRRIVAIFVLAAALSLPAAASAAESKRHVGLHDMTCTSITAMGKGLAPNASMQLTLTDRDNGSTLAGQSVRTSATGEFMAKLPARLNKVLSIRLTVSRPDGSKVAFADHVMAKGAP
Ga0307300_101465221	3300028880	Soil	MRLCRILAVLGVLAALSLPAAASAAESRNHIGLHDMTCTSIMAMGKGLAPNASMQLTLTDRDNGSTLAGQTVRTSAKGEFMVKLPARLNQVLSIRLTVSRPDGSKIGFADHAMAKGAAMCNLPFT
Ga0307277_102300032	3300028881	Soil	MRLRRILAVLGLATALSLPAAAFAASSGNHIGLHNMTCTSIMAMGKGLDPNATMQLTLTNRDNDTTLAGQTVRTSAKGEFMVRLPARLNQVLSIRLTVSR
Ga0268255_100883642	3300030516	Agave	MRLRRIVAIFVVAAALSLPAAASAAESKRHIGLHDMTCTSITAMGKGLAPNASMQLTLTDRDNGSTLAGQSVRTSAKGEFMAELPARLNKVLSIRLTVSRP
Ga0308206_12025071	3300030903	Soil	MRLCRILAILGLMAALSLPAAASAAETKQHIGLHDMTCTSITAMGKGLLKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAKLPARLNKVLSI
Ga0308200_10949011	3300030905	Soil	MRLCRILAILGLMAALSLPAAASAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGSR
Ga0308187_102856541	3300031114	Soil	MRLCRILAVLGVLAALSLPAAASAAESRNHIGLHDMTCTSIMAMGKGLTPNASMQLTLTNRDNGSTLAGQTVRTSAKGEFMVKLPARLNQVLSIRLTVSRPDGSKIGFADHAMAKGAAMCNLPFTGPS
Ga0307408_1006301861	3300031548	Rhizosphere	MRLRRIVAVLGLAAALSLPAAASAESKRHVGLHDMTCTSIMAMGKGLAPDAAVQLTLTDRDNGTTLAGQTVRTSAKGEFMAKLPAR
Ga0307408_1006935541	3300031548	Rhizosphere	MRLCRILAVLGLAASLSLPAAVSAAESKQHLGLHDMTCTSITAMGKGLPKSTAMQLTLTNRDTGSTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVTGSDGAKVAFADHVMAKGAAMCNLP
Ga0307405_102160543	3300031731	Rhizosphere	MRLCRILAVLGLLAALSLPAAASAAETKSHVGLHDMTCTSITAMGKGLSPNTALDLKLTNRDNGSSLAGQTVRTSAKGDFMVKLPARLNQVLSIRLTVSRSDGTKVAFADHTMAMGAAMC
Ga0307405_102888382	3300031731	Rhizosphere	MRLRRIVAVLGLAAALSLPAAASAAESKRHVGLHDMTCTSIMAMGKGLSPNAAMQLTLTNRDNGSTVAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGTKIAFADHVMAKGAAMC
Ga0307405_109295541	3300031731	Rhizosphere	MRLRRIVAVLGLAAALSLPAAASAESKRHVGLHDMTCTSIMAMGKGLAPDAAVQLTLTDRDNGTTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTV
Ga0307405_112991071	3300031731	Rhizosphere	MRLCRTLAVLGLLAALSLPAAASAAETKSHVGLHDMTCTSITAMGKGLSRNAALDLKLTDRDNGSTLAGQTVRTSAKGEFMVKLPARLNQVLSIRLTVSRPDGTKVAFADHAMAKGAAMC
Ga0307413_111339421	3300031824	Rhizosphere	MRLCRILAVLGLAAALSLPAAASAAETRNHVGLHDMTCTSITAMGKGLAKNTAMQLTLTNRDNGSTLAGQTVRTSAKGDFMAKLPARLNKVLSIRL
Ga0307410_113920891	3300031852	Rhizosphere	MRLCRILAVLSLLAALSLPAAASAAETKSHVGLHDMTCTSITAMGKGLSPNAALDLKLTNRDSGGTLAGQTVRTSAKGAFMAKLP
Ga0307406_100561303	3300031901	Rhizosphere	MRLCRILAVLGLAASLSLPAAVSAAESKQHLGLHDMTCTSITAMGKGLPKSTAMQLTLTNRDTGSTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVTGSDGAKVAFADHVMAKGAAMCNLPFTGPSRSV
Ga0307407_100652321	3300031903	Rhizosphere	MRLCRILAVLGLAAALSLPAAVSAAESRQHLGLHDMTCTSITAMGKGLPKSTAMQLTLTNRDTGSTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVTGSDGAKVAFADHVMAKGA
Ga0307407_102156671	3300031903	Rhizosphere	MRLRRIVAVLGLAAALSLPAAASAAESKRHVGLHDMTCTSIMAMGKGLSPNAAMQLTLTNRDNGSTLAGQTVRTSAKGKFMAKLPARLNKVLSIRLTV
Ga0307409_1005606342	3300031995	Rhizosphere	MRLRRIVAITGLAAALSLPAAASAAESKRHIGLHDMTCTSITAMGKGLAPNASMQLTLTNRDNGSTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVSRPDGSKIAFADHVMAKGAAMCNLPFTGPSRVAA
Ga0307409_1013530782	3300031995	Rhizosphere	MRLRRILAVLGLVAALSLPAAASAAETKSHVGLHDMTCTSITAMGKGLSPNAALDLKLTDRDNGGSLAGQTVRTSAKGEFMVKLPARLNQVLSIRLTVSR
Ga0307416_1016482051	3300032002	Rhizosphere	MRLCRILAVLGLVAALSLPAAASAAETKSHVGLHDMTCTSITAMGKGLSPNAALDLKLTDRDNGGSLAGQTVRTSAKGEFMVKLPARLNRVLSI
Ga0307416_1029919751	3300032002	Rhizosphere	MRLCRTLAVLSLLAALSLPAAASAAETKSHVGLHDMTCTSITAMGKGLSPNAALDLKLTNRDNGGTLAGQTVRTSAKGAFMAKLPARLNKVLSIRLTVSRPDGT
Ga0307414_107644912	3300032004	Rhizosphere	MRLCRILAVLGLAAALSLPAAASAAETRNHVGLHDMTCTSITAMGKGLAKSTTMQLTLTNRDTGSTLAGQTVHTSAKGDFMVELPARLNKVLSIRLTVSRPNGDKVAFADHVMAKGAAMCNLP
Ga0307411_108162871	3300032005	Rhizosphere	MRLCRILAVLGLAASLSLPAAVSAAESKQHLGLHDMTCTSITAMGKGLPKSTAMQLTLTNRDTGSTLAGQTVRTSAKGEFMAKLPARLNKVLSIRLTVTGSDGAKVAFADHVMAKGAAMC
Ga0268251_100583411	3300032159	Agave	MRLRRIVAILGLAAALSAPAAASAAEPKRHIGLHEMTCTSIMAMGKGLAPKAALQLTLTNRDNGTALAGQTVRTSAKGEFMAKLPAR
Ga0268251_103084231	3300032159	Agave	MRLCRILAVLGLLAALSVPAAASAAETKSHVGLHDMTCTSITAMGKGLSPNASLDLKLTNRDNGSTLAGQTVKTSAKGDFMVKLPARLNQVLSIRLTVSRPDGTKVAFSDHSMAKGAAMCDLPF
Ga0307472_1025529312	3300032205	Hardwood Forest Soil	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAELPARLNKVLSIRLTVSRPDGSRIAFADHVMAKGAAMCNLPFTGPS
Ga0247830_109822821	3300033551	Soil	MRLCRILAILGLMAALSLPAAATAAETKQHIGLHDMTCTSITAMGKGLPKSTSMQLTLTNRDTGGTLAGQTVRTSAKGEFMAELPARLNKVLSIRLTVSRPDGSRI
Ga0334931_039694_747_1031	3300034377	Sub-Biocrust Soil	MRLCRILAVLGLLAALSVPAAASAAETKNHVGLHDMTCTGITAMGKGLTPNAAMQLTLTNRDNGSTLAGQTVRTSAKGEFMVKLPARLNKVLSIR
Ga0334960_045044_330_611	3300034402	Sub-Biocrust Soil	MRLCRILAVLGLLAALSVPAAASAAETKNHVGLHDMTCTGITAMGKGLTPNAAMQLTLTNRDNGSTLAGQTVRTSAKGEFMVKLPARLNKVLSI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097997

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences