NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F098018

Metagenome / Metatranscriptome Family F098018

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F098018
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 36 residues
Representative Sequence MDDKYQNYKKEIEKINQRVKEYLXKKXYLFKIRNI
Number of Associated Samples 84
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(35.577 % of family members)
Environment Ontology (ENVO) Unclassified
(69.231 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(89.423 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 42.86%    β-sheet: 0.00%    Coil/Unstructured: 57.14%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF00905Transpeptidase 48.08
PF03462PCRF 16.35
PF17092PCB_OB 9.62
PF00575S1 1.92
PF10150RNase_E_G 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0216Protein chain release factor RF1Translation, ribosomal structure and biogenesis [J] 16.35
COG1186Protein chain release factor PrfBTranslation, ribosomal structure and biogenesis [J] 16.35

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine35.58%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater12.50%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine10.58%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater7.69%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater6.73%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater5.77%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh5.77%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine2.88%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine2.88%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.92%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.92%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.96%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.96%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.96%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.96%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.96%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.96%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001960Marine microbial communities from South of Charleston, South Carolina, USA - GS014EnvironmentalOpen in IMG/M
3300005521Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255EnvironmentalOpen in IMG/M
3300005606Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84EnvironmentalOpen in IMG/M
3300005946Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_DCM_ad_71m_LV_AEnvironmentalOpen in IMG/M
3300005971Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_AEnvironmentalOpen in IMG/M
3300006166Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91EnvironmentalOpen in IMG/M
3300009445Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017779Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018036Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018049Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020280Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX556044-ERR599114)EnvironmentalOpen in IMG/M
3300020305Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX556024-ERR599003)EnvironmentalOpen in IMG/M
3300020343Marine microbial communities from Tara Oceans - TARA_B100000475 (ERX555975-ERR599174)EnvironmentalOpen in IMG/M
3300020345Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX556079-ERR599137)EnvironmentalOpen in IMG/M
3300020362Marine microbial communities from Tara Oceans - TARA_A100001234 (ERX556035-ERR599049)EnvironmentalOpen in IMG/M
3300020379Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)EnvironmentalOpen in IMG/M
3300020385Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)EnvironmentalOpen in IMG/M
3300020388Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)EnvironmentalOpen in IMG/M
3300020391Marine microbial communities from Tara Oceans - TARA_B100000989 (ERX556130-ERR598967)EnvironmentalOpen in IMG/M
3300020392Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)EnvironmentalOpen in IMG/M
3300020393Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)EnvironmentalOpen in IMG/M
3300020400Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)EnvironmentalOpen in IMG/M
3300020401Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)EnvironmentalOpen in IMG/M
3300020404Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)EnvironmentalOpen in IMG/M
3300020405Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)EnvironmentalOpen in IMG/M
3300020409Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)EnvironmentalOpen in IMG/M
3300020430Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)EnvironmentalOpen in IMG/M
3300020432Marine microbial communities from Tara Oceans - TARA_B100002052 (ERX556103-ERR599100)EnvironmentalOpen in IMG/M
3300020445Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)EnvironmentalOpen in IMG/M
3300020452Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)EnvironmentalOpen in IMG/M
3300020453Marine microbial communities from Tara Oceans - TARA_B100001758 (ERX556003-ERR598963)EnvironmentalOpen in IMG/M
3300020465Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)EnvironmentalOpen in IMG/M
3300020468Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300020474Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)EnvironmentalOpen in IMG/M
3300020477Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)EnvironmentalOpen in IMG/M
3300021068Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300022928Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaGEnvironmentalOpen in IMG/M
3300024235Seawater microbial communities from Monterey Bay, California, United States - 79DEnvironmentalOpen in IMG/M
3300024258 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_120_MGEnvironmentalOpen in IMG/M
3300024293Seawater microbial communities from Monterey Bay, California, United States - 63DEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025662Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_150m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025672Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI073_LV_135m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025869Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300026257Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)EnvironmentalOpen in IMG/M
3300026266Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257 (SPAdes)EnvironmentalOpen in IMG/M
3300026270Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265 (SPAdes)EnvironmentalOpen in IMG/M
3300026479Seawater microbial communities from Monterey Bay, California, United States - 26DEnvironmentalOpen in IMG/M
3300026495Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 24R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027801Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300028414Seawater microbial communities from Monterey Bay, California, United States - 33DEnvironmentalOpen in IMG/M
3300031630Marine microbial communities from water near the shore, Antarctic Ocean - #38EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300031785Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MGEnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032047Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GOS2230_104184623300001960MarineVEDKYLNYKKEIEKINQRVKEYL*KK*NFFKIRQSQ*
Ga0066862_1005675823300005521MarineMDDKYLNYKTEIEKINYRVKEYL*KK*YLFKT*NI
Ga0066835_1001352723300005606MarineMDYKFTDFKKEIEKINQRIKEYL*KTQDLLQIRYT*
Ga0066378_1029431223300005946MarineMDYKFLDFKKEIEKINQRVKEYL*KKSDSYEIRKS*
Ga0066370_1016845023300005971MarineMEDKYLDIKKEIEKINQRVKEYL*KEKYIRKIKIIR*
Ga0066836_1038156113300006166MarineMDDNYQDYKKEIEKINFRVKEYL*KKSYRLKT*NIK
Ga0115553_114634323300009445Pelagic MarineMDDKYQNYKIEIEKINSRVKEYL*KK*YLFKARTIK*
Ga0114932_1008556323300009481Deep SubsurfaceMDDKYQDYKKEIEKINYRVKEYL*KK*Y*LKT*KFKY*
Ga0114932_1070533023300009481Deep SubsurfaceMEDKFLSLKKEIEKINLRIKEYL*EESN*FKTRKP*
Ga0115568_1014551923300009498Pelagic MarineMDDKYQDYKKEIEKINFRVKEYL*KK*YSFKT*GIKY*
Ga0115004_1037925623300009526MarineMNDNYLNFKKEIEKINQRVKGYL*EKQYLSKARKSQ*
Ga0133547_1019532923300010883MarineMEDKYLIFKKEIEKINQRVKGYL*KK*YSFKIRKTQ*
Ga0163110_1005239323300012928Surface SeawaterMDDKYLDLKKEIEKINQRIKEYL*KK*DLFKTGKYR*
Ga0163110_1018989713300012928Surface SeawaterMDQKYLDFKKEIEKINQKVKEYL*KK*NLLKTGTYK*
Ga0163110_1058514713300012928Surface SeawaterMDPKYLDFKKEIEKINQRVKEYL*KK*YLFKIKKS*
Ga0163110_1095822623300012928Surface SeawaterMDHKFLDFKKEIEKINQRVKEYL*KKSDSYKIRKS*
Ga0163179_1141737913300012953SeawaterMDDKYENYKEEIEKINQRIKEYL*KK*YLSKTKNP*
Ga0163111_1023014823300012954Surface SeawaterMDYKYTDFKKEIEKINQRVKEYL*KSTNLLKIRKS*
Ga0163111_1035845323300012954Surface SeawaterMDQKYLDFKKEIEKINQRVKEYL*KK*NFFKIRKS*
Ga0163111_1047868613300012954Surface SeawaterMENKFTDFKKEIEKINQRITEYL*KKSNLFKIKKS*
Ga0163111_1070185223300012954Surface SeawaterMEDRFLNYKKEIEKINQRVKEYL*KE*YLFEIRNSKRKNAKP*
Ga0181404_109039123300017717SeawaterMDDKYQDYKKEIEKINFRVKEYLXKKQYSFKTSGIKY
Ga0181404_114759323300017717SeawaterMEDKYLNHKKEIEKINKRVKEYLXKKXYSFKIRKS
Ga0181399_117714223300017742SeawaterMDDKYQDYKKEIEKINFRVKENLXKKXYSFKTXGIKY
Ga0181392_110294623300017749SeawaterMDDKYQNYKKEIEKINFRVKEYLXKKQYPFKTXDIK
Ga0181392_123326523300017749SeawaterMDDKYQDYKKEIEKINYKVKEYLXKKXYLFKTXGIKY
Ga0181407_116865923300017753SeawaterMDDKYQDYKKEIEKINYRVKEYLXEKXYXHKTXKIKY
Ga0181422_107230913300017762SeawaterMEDRFLNIKKEIEKINQRVKEYLXKKRYFFQIRKS
Ga0181413_126339423300017765SeawaterMDYKYTDYKKEIEKINQRVKEYLXKKWYLFKIKRP
Ga0187217_122164723300017770SeawaterMDDKYQDYKKEIEKINYRVKEYLXKKXYXLKTXKIK
Ga0181386_101277923300017773SeawaterMDDKYQNYKIEIEKINSRVKEYLXKKXYLFKAXSIK
Ga0181395_126163713300017779SeawaterMEDKYLNFRKEIEKINQRIKEYLXKEKYLFTIRRS
Ga0181424_1006041023300017786SeawaterMEDKYLNYKEEIEKINRRIKEYLXKKRYFFQIRKS
Ga0181424_1011576423300017786SeawaterMDEKYLNFKKEIEKINQRIKEYLXKEXYLFKVKKK
Ga0181565_1058776923300017818Salt MarshMDNRFLDFKKEIEKINQRVKEYLXKKSDSTKIRKS
Ga0181581_1015451923300017962Salt MarshMEDKYLDLKKEIEKINQRIKEYLXKKKYLFNIRRKK
Ga0181600_1017233223300018036Salt MarshMDDKYLNLKKEIEKINKRIKEYLXKKXYSFKIRKSQ
Ga0181572_1016795523300018049Salt MarshMYDKYQDYKKEIEKINFRVKEYLXKKXNSFKTXEIKLKNAGS
Ga0181566_1093215123300018426Salt MarshMDNRFLDFKKEIEKINQRVKEYLXKKSDPTKIRKP
Ga0211591_102714623300020280MarineMDHKFLDFKKEIEKINQRVKEYLXKKSNSYKIRKS
Ga0211513_101952023300020305MarineMDHKYTDFKKEIEKINQRVKEYLXKKWYLFKVKRP
Ga0211626_111257423300020343MarineMDDKYLNLKKEIEKINKRIKEYLXKERYSFKIRKS
Ga0211706_101679823300020345MarineMEDKYQNYKDEIEKINQRVKEYLXNKXSLFKIKIN
Ga0211488_1008215313300020362MarineMDDNYLNYKKEIEKINQRIKEFLXKKLYLFKVRKSQQKNVGY
Ga0211652_1019213323300020379MarineMDDKYLDLKKEIEKINQRIKEYLXKKXNSFKIRKY
Ga0211652_1027242423300020379MarineMENKYLDHKKEIEKINQRVKEYLXKKSNFFKIRET
Ga0211677_1002581123300020385MarineMDDKYQNYKIEIEKINSRVKEYLXKKXYLFKARSIK
Ga0211677_1012448323300020385MarineMDYKYTDFKKEIEKINQRVKEYLXKSKNLFEIRKS
Ga0211677_1013426823300020385MarineMDDKYLSLKKEIEKINQRVKEYLXKKXNLFKIRFTQ
Ga0211678_1010851923300020388MarineMDYKYTDYKKEIEKINQRVKEYLXKKQYFFKTRKT
Ga0211675_1022872823300020391MarineMDDKYINLKKEIEKINQRVKEYLXKKRYLFKIRDFK
Ga0211666_1002467123300020392MarineMDNKFTDFKKEIEKINQRVKEYLXKKXNLSKIRSA
Ga0211618_1001481333300020393MarineMDYKFTDFKKEIEKINQRIKEYLXKTQDLLQIRYT
Ga0211618_1007680223300020393MarineMDDNYLNYKKEIEKINQRIKEFLXKKLYLFKVRKSQQKNVGC
Ga0211636_1012943123300020400MarineMDDKYLIYKKEIEKINKRVKEFLXKKRYLLKIRELQQRNA
Ga0211617_1039885323300020401MarineMDPKYLDFKKEIEKINQRVKEYLXKKXYLFKIKKL
Ga0211659_1044478423300020404MarineMDDKYLNLKKEIEKINKRIKEYLXKKXYSFKIRKS
Ga0211496_1041152923300020405MarineMDPKYLDFKKEIEKINQRVKEYLXKKXYLFKIRKS
Ga0211472_1006499523300020409MarineMDYKFTDLKKEIEKINQRIKEYLXKTQDLLQIRYT
Ga0211622_1009684123300020430MarineMEDKYINLKKEIEKINQRVKEYLXEKXNLFKARNSK
Ga0211622_1014371323300020430MarineMENKFLDNKKEIEKINFRVKEYLXKKSNFFKVREF
Ga0211622_1038234323300020430MarineMDHKYLDLKKEIEKINQRVKEYLXKNXDLSKIRRAK
Ga0211556_1039207313300020432MarineMDTKYLDIKKDIEKINQRIKEYLXKKXYFYKIRKS
Ga0211564_1047634723300020445MarineMEDKYQNYKEEIEKINQRVKEYLXKKXYLFKIKIN
Ga0211545_1001166433300020452MarineMNEKFLNYKTEIEKINFRVKEYLXKKXYLFKIRNIK
Ga0211550_1020346923300020453MarineMDDKYLDLKKEIEKINQRVKEYLXKKXYLFKTXKYR
Ga0211640_1020095923300020465MarineMDHKYLDFKKEIEKINHRVKEYLXKKSDLFKARRS
Ga0211475_1002434523300020468MarineMDDKYQDYKKEIEKINYRVKEYLXKKXYXLKTXKIKH
Ga0211475_1021113113300020468MarineMNDKYLNFKKEIEKINQRVKEYLXKKQYLLKIRES
Ga0211475_1041074013300020468MarineMDDKYINLKKEIEKINQRVKEYLXKEXYSFKIKKS
Ga0211475_1043361323300020468MarineMDDKYENYKEEIEKTNQRIKEYLXKKXYLSKTKNP
Ga0211577_1013350223300020469MarineMEKNYFNFKEEIEKINQRIKEYLXKKXDSFKIRKTKQ
Ga0211543_1018852923300020470MarineMEDKYQNYKEEIEKINQRVKEYLXKKXSLFKIKIN
Ga0211547_1011987623300020474MarineMNDKYLNFKKEIEKINKRIKEYLXKKXYSFKIRKS
Ga0211585_1004559023300020477MarineMDNEFINLKSEIHKINSRVKEYLXKKQCIFKVRKK
Ga0206684_114996213300021068SeawaterMDHKYTDFKKEIEKINQRVKEYLXKKWYLFKVKKP
Ga0213863_1003901413300021371SeawaterMDDKYQNYKIEIEKINSRVKEYLXKKQYLFKTXNIKQ
Ga0213861_1050880823300021378SeawaterMDDKYQIYKLEIEKINSRVKEYLXKKXYLFKARSIK
Ga0222717_1039040613300021957Estuarine WaterMENIYLNYKLEIEKINQRVKEYLXKKXYSFKVRKEQ
Ga0255758_1009990023300022928Salt MarshMDDKYQDYKKEIEKINFRVKEYLXKKQYSFKTXGIKY
Ga0228665_104242013300024235SeawaterMDDKYQNYKIEIEKINSRVKEYLXKKXYLFKARTIK
(restricted) Ga0233440_117776123300024258SeawaterMDDKYLNYKTEIEKINYRVKEYLXKKXYLFKTXGVKQ
Ga0228651_114345823300024293SeawaterMDDKYQNYKIEIEKINSRVKEYLXKKXYLFKARSIKQ
Ga0244775_1029477413300024346EstuarineMDDKYQNYKIEIEKINSRVKEYLXKKXYLFKTRSIK
Ga0209664_101144933300025662MarineMDDKYQDYKKEIEKINSRVKEYLXKKQYSFKTXSIKR
Ga0209663_119564713300025672MarineMDDKYQLYKKEIEKINYRVKEYLXKKXYFFKTRSIK
Ga0209308_1008124223300025869Pelagic MarineMDDKFINLKNEIEKINSRVKEYLXKKQYLLKIREA
Ga0209632_1037433023300025886Pelagic MarineMDDKYLNYKKEIEKINQRVKEYLXKKXYSYKIRKTQ
Ga0208407_107092023300026257MarineMDNKFINLKNEIEKINSRVKEYLXKKQYLLKIREA
Ga0208410_110552313300026266MarineMDDKYQNFKTEIEKINSRVKEYLXKKXYLFKTXNI
Ga0207993_117542823300026270MarineMINEKHLDFKKEIEKINLRIKEYLXKKSNFFKARKS
Ga0228622_103911923300026479SeawaterMDDKYQNYKIEIEKINSRVKEYLXKKXYLFKTRTVK
Ga0247571_117932723300026495SeawaterMDDKYQDYKKEIEKINYRVKEYLXKKXYLFKARSIKQ
Ga0209091_1002976233300027801MarineMENIYLKYKSDIEKINQRVKGYLXKKWYLFKIRKK
Ga0209501_1058012713300027844MarineMNDDFLNIKLEIEKINLRVKEYLXKKEHLFDIRKK
Ga0228627_103868523300028414SeawaterMDDKYQNYKKEIEKINQRVKEYLXKKXYLFKIRNI
Ga0308004_1001400143300031630MarineMENIYLNYKSDIEKINQRVKEYLXKKWYLFKIRKK
Ga0315326_1006607613300031775SeawaterMDDKYLNYKIEIEKINYRVKEYLXKKXYLFKTXNI
Ga0310343_1026734723300031785SeawaterMDQKYTDFKKEIEKVNQRVKEYLXKKLYSFKISXS
Ga0315320_1061731823300031851SeawaterMDDKYQDYKKEIEKINFRVKEYLXKKXYSFKTXGIKY
Ga0310344_1134917523300032006SeawaterMNDKYDNYKEEIEKINQRIKEYLXKKXYLSKIKNP
Ga0315330_1036424623300032047SeawaterMDDKYLNLKKEIEKINKRIKEYLXKKXYSFKISKS
Ga0315315_1004167123300032073SeawaterMDEKYLNFKKEIEKINQRIKEYLXTKXDLFKIRKSQQNNTGS
Ga0315315_1107418423300032073SeawaterMEDKYFNYKKEIEKINQRIKEYLXKEKYLFKIRQSQQKNARS

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.