NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F098089

Metagenome / Metatranscriptome Family F098089

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F098089
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 43 residues
Representative Sequence MADVITVPQVQPVQPALRFLRVIPGVLLLAAVGYAGKLLE
Number of Associated Samples 90
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 96.15 %
% of genes near scaffold ends (potentially truncated) 99.04 %
% of genes from short scaffolds (< 2000 bps) 89.42 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (87.500 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(25.000 % of family members)
Environment Ontology (ENVO) Unclassified
(29.808 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.962 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 36.76%    β-sheet: 0.00%    Coil/Unstructured: 63.24%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF00590TP_methylase 37.50
PF03460NIR_SIR_ferr 2.88
PF01077NIR_SIR 1.92
PF03601Cons_hypoth698 0.96
PF13701DDE_Tnp_1_4 0.96
PF13231PMT_2 0.96
PF01244Peptidase_M19 0.96
PF14824Sirohm_synth_M 0.96
PF02910Succ_DH_flav_C 0.96
PF00160Pro_isomerase 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0652Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin familyPosttranslational modification, protein turnover, chaperones [O] 0.96
COG2355Zn-dependent dipeptidase, microsomal dipeptidase homologPosttranslational modification, protein turnover, chaperones [O] 0.96
COG2855Uncharacterized membrane protein YadS, UPF0324 familyFunction unknown [S] 0.96

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms87.50 %
UnclassifiedrootN/A12.50 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459005|F1BAP7Q01A6LYQAll Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis514Open in IMG/M
3300000559|F14TC_108584481Not Available567Open in IMG/M
3300001137|JGI12637J13337_1001401All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1921Open in IMG/M
3300004080|Ga0062385_10057926All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1710Open in IMG/M
3300004092|Ga0062389_102018704All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter753Open in IMG/M
3300004092|Ga0062389_102411995All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter696Open in IMG/M
3300005167|Ga0066672_10650571All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae680Open in IMG/M
3300005180|Ga0066685_11069606All Organisms → cellular organisms → Bacteria → Proteobacteria529Open in IMG/M
3300005332|Ga0066388_105651275All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter633Open in IMG/M
3300005446|Ga0066686_10092383All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1936Open in IMG/M
3300005471|Ga0070698_101636991All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter596Open in IMG/M
3300005559|Ga0066700_10253006All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1232Open in IMG/M
3300005574|Ga0066694_10032195All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2349Open in IMG/M
3300005614|Ga0068856_102028051Not Available585Open in IMG/M
3300005719|Ga0068861_101524755All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter656Open in IMG/M
3300006163|Ga0070715_11032900Not Available514Open in IMG/M
3300006172|Ga0075018_10396175All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae701Open in IMG/M
3300006175|Ga0070712_100102140All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2123Open in IMG/M
3300006175|Ga0070712_101071048All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300006176|Ga0070765_101799237All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae575Open in IMG/M
3300006800|Ga0066660_10143188All Organisms → cellular organisms → Bacteria1761Open in IMG/M
3300006800|Ga0066660_11136766All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia616Open in IMG/M
3300006854|Ga0075425_100441091All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1499Open in IMG/M
3300006903|Ga0075426_11052938All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae615Open in IMG/M
3300006904|Ga0075424_102006787All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae610Open in IMG/M
3300007265|Ga0099794_10442283All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300009012|Ga0066710_100691139All Organisms → cellular organisms → Bacteria → Acidobacteria1555Open in IMG/M
3300009038|Ga0099829_10641504All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium883Open in IMG/M
3300009089|Ga0099828_10844831All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300010360|Ga0126372_13240555All Organisms → cellular organisms → Bacteria → Proteobacteria506Open in IMG/M
3300011120|Ga0150983_14990317All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1122Open in IMG/M
3300011270|Ga0137391_10241385All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1568Open in IMG/M
3300011271|Ga0137393_10529568All Organisms → cellular organisms → Bacteria → Acidobacteria1011Open in IMG/M
3300011271|Ga0137393_10921671All Organisms → cellular organisms → Bacteria → Acidobacteria745Open in IMG/M
3300012201|Ga0137365_11118497All Organisms → cellular organisms → Bacteria → Acidobacteria567Open in IMG/M
3300012202|Ga0137363_10007523All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6833Open in IMG/M
3300012202|Ga0137363_11065787Not Available687Open in IMG/M
3300012206|Ga0137380_10027716All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5218Open in IMG/M
3300012206|Ga0137380_10695967All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium883Open in IMG/M
3300012207|Ga0137381_11730022All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300012356|Ga0137371_11195806All Organisms → cellular organisms → Bacteria → Acidobacteria567Open in IMG/M
3300012361|Ga0137360_11850959All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300012363|Ga0137390_10769631All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae922Open in IMG/M
3300012371|Ga0134022_1070380All Organisms → cellular organisms → Bacteria → Acidobacteria614Open in IMG/M
3300012381|Ga0134026_1072603All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300012582|Ga0137358_11084318All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300012685|Ga0137397_10398458All Organisms → cellular organisms → Bacteria → Acidobacteria1025Open in IMG/M
3300012925|Ga0137419_10538895All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300012929|Ga0137404_10742772All Organisms → cellular organisms → Bacteria → Acidobacteria889Open in IMG/M
3300012929|Ga0137404_10995891All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300014150|Ga0134081_10073094All Organisms → cellular organisms → Bacteria → Acidobacteria1050Open in IMG/M
3300015245|Ga0137409_11368445Not Available552Open in IMG/M
3300016371|Ga0182034_11732438All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300016371|Ga0182034_12080112Not Available501Open in IMG/M
3300017936|Ga0187821_10001468All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7183Open in IMG/M
3300017943|Ga0187819_10213477All Organisms → cellular organisms → Bacteria → Acidobacteria1136Open in IMG/M
3300017999|Ga0187767_10075402All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium891Open in IMG/M
3300018086|Ga0187769_10025962All Organisms → cellular organisms → Bacteria3935Open in IMG/M
3300018433|Ga0066667_11114012All Organisms → cellular organisms → Bacteria → Acidobacteria684Open in IMG/M
3300020170|Ga0179594_10214700All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium722Open in IMG/M
3300020579|Ga0210407_10004203All Organisms → cellular organisms → Bacteria → Acidobacteria11417Open in IMG/M
3300020579|Ga0210407_10069516All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2642Open in IMG/M
3300020579|Ga0210407_11263092All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300020581|Ga0210399_10564537All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis943Open in IMG/M
3300020583|Ga0210401_10902079All Organisms → cellular organisms → Bacteria → Acidobacteria743Open in IMG/M
3300021168|Ga0210406_10672662All Organisms → cellular organisms → Bacteria → Acidobacteria800Open in IMG/M
3300021401|Ga0210393_10822586All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae755Open in IMG/M
3300021405|Ga0210387_10606120All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis973Open in IMG/M
3300021406|Ga0210386_11737040Not Available515Open in IMG/M
3300021407|Ga0210383_11040247All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae693Open in IMG/M
3300021478|Ga0210402_10843327All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium842Open in IMG/M
3300021478|Ga0210402_11858870All Organisms → cellular organisms → Bacteria → Proteobacteria528Open in IMG/M
3300021559|Ga0210409_11681667All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300022532|Ga0242655_10217819All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300022532|Ga0242655_10301377All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300024271|Ga0224564_1085163All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae636Open in IMG/M
3300024271|Ga0224564_1087636All Organisms → cellular organisms → Bacteria → Acidobacteria627Open in IMG/M
3300024330|Ga0137417_1273196All Organisms → cellular organisms → Bacteria → Acidobacteria762Open in IMG/M
3300024330|Ga0137417_1502140All Organisms → cellular organisms → Bacteria6695Open in IMG/M
3300025916|Ga0207663_11190066Not Available613Open in IMG/M
3300025928|Ga0207700_11342185Not Available637Open in IMG/M
3300025941|Ga0207711_11986835Not Available524Open in IMG/M
3300026314|Ga0209268_1114087All Organisms → cellular organisms → Bacteria → Acidobacteria695Open in IMG/M
3300026529|Ga0209806_1244040All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium606Open in IMG/M
3300027174|Ga0207948_1010630All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1063Open in IMG/M
3300027701|Ga0209447_10176858All Organisms → cellular organisms → Bacteria → Acidobacteria585Open in IMG/M
3300027812|Ga0209656_10328153All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae701Open in IMG/M
3300027846|Ga0209180_10634701All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium587Open in IMG/M
3300027884|Ga0209275_10236100All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis999Open in IMG/M
3300028072|Ga0247675_1056419Not Available587Open in IMG/M
3300028536|Ga0137415_10543945All Organisms → cellular organisms → Bacteria → Acidobacteria970Open in IMG/M
3300029636|Ga0222749_10258832All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium888Open in IMG/M
3300030878|Ga0265770_1001098All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3726Open in IMG/M
3300031057|Ga0170834_110133108All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300031128|Ga0170823_10197553All Organisms → cellular organisms → Bacteria → Acidobacteria912Open in IMG/M
3300031231|Ga0170824_105754054Not Available539Open in IMG/M
3300031446|Ga0170820_16636269Not Available809Open in IMG/M
3300031469|Ga0170819_14814063All Organisms → cellular organisms → Bacteria → Acidobacteria949Open in IMG/M
3300031744|Ga0306918_10484986All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300031753|Ga0307477_10635836All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium717Open in IMG/M
3300031910|Ga0306923_10572235All Organisms → cellular organisms → Bacteria1271Open in IMG/M
3300031962|Ga0307479_11690345All Organisms → cellular organisms → Bacteria → Acidobacteria587Open in IMG/M
3300032180|Ga0307471_101323286All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter882Open in IMG/M
3300033134|Ga0335073_10082623All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4192Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil25.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil16.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.65%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.77%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil4.81%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil4.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.88%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.88%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.88%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.88%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.88%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.92%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.92%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.92%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.92%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.96%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.96%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300001137Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012371Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012381Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024271Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300027174Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)EnvironmentalOpen in IMG/M
3300027701Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300028072Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030878Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_053365702170459005Grass SoilMASSVAIAQVKPVNPALQFLRIVPGVLLLAAVGYAGKLMEANVGK
F14TC_10858448133300000559SoilMASSVAVAQAKPASPALQFLKLVPGVLLLAGVGYAGKLLEANVGKY
JGI12637J13337_100140143300001137Forest SoilMSEAAVALPRVRSSNPAWNFLRLIPGVLLLAAIGYAGKLLEQNVGKYA
Ga0062385_1005792643300004080Bog Forest SoilMADAVVIPQVQPVQPALRFLRLIPGVLLLAAIGYAGKLLEQN
Ga0062389_10201870413300004092Bog Forest SoilMADAVVIPQAQPEVQPAQPALRFLRVIPGVLLLAAIGYAGKLLEQNV
Ga0062389_10241199513300004092Bog Forest SoilMADAVVIPQVQPIQPALRFLRLIPGVLLLAAIGYAGKLLEQNV
Ga0066672_1065057113300005167SoilMADVIAVTQVRPVQPVFRYLRAIPGVLLLFAIGYAGKLLEQNVGAYAKAH
Ga0066685_1106960623300005180SoilMSDVITVPQVRPVQPVLRFLRVVPGVILLAGIGYAGKLLEQNVGAYAKAHHWTFPNI
Ga0066388_10565127513300005332Tropical Forest SoilMASSVAVAQVRPANPALQFLRLMPGVLLLAGVGYAGKLLEAN
Ga0066686_1009238333300005446SoilMSDVITVPQVRPVQPVLRFLRVVPGVILLAAIGYAGKLLEQNVGAYAK
Ga0070698_10163699133300005471Corn, Switchgrass And Miscanthus RhizosphereMASSVAVARVRPVNPALQFLKLVPGVLLLAGVGYAGKLLEANV
Ga0066700_1025300633300005559SoilMAGTVALPQVRPVNPGLQFLKVIPGVLLLAAVGYAGKL
Ga0066694_1003219513300005574SoilMADVITVPQVQPVQAALRFLRVIPGVLLLAAVGYAGKLL
Ga0068856_10202805113300005614Corn RhizosphereMAGSVALPQSQARSHQPALQCLRVIPGVLLLAAVGYAG
Ga0068861_10152475513300005719Switchgrass RhizosphereMAGSVALPQSQAQSHQPALQCLRVIPGVLLLAAVGYAGKLLEKNVGA
Ga0070715_1103290023300006163Corn, Switchgrass And Miscanthus RhizosphereMAGSVALPQSQVQSHQPALQFLRVTPGVLLLAGVGYAGK
Ga0075018_1039617513300006172WatershedsMADVVTVPQVQPVQPALRFLRVVPGILLLAAVGYAGK
Ga0070712_10010214053300006175Corn, Switchgrass And Miscanthus RhizosphereMASSMALPRVRSVNLAIQFLKVIPGVLLLAAVGYAGKLL
Ga0070712_10107104833300006175Corn, Switchgrass And Miscanthus RhizosphereMASSIAVPQVRQVNPALQFLKVIPGVLLLAAIGYAGKLLEANVGKYAKVHHWTFPN
Ga0070765_10179923713300006176SoilMASSIALPQARTEQPALGLLRLIPGVLLLAAVGYAG
Ga0066660_1014318833300006800SoilMADVITVTQVQLVQPVFRYLRAIPGVLLLFAIGYAGKLLEQNVGAYAKAHYW
Ga0066660_1113676633300006800SoilMADVIAVTQVRPVQPVFRYLRAIPGVLLLFAIGYAGKLLEQNVGAYAKAHYW
Ga0075425_10044109113300006854Populus RhizosphereMAGSVALPQFQAQSRQPALQYLRVIPGVLLLAAVGYAGKLLE
Ga0075426_1105293813300006903Populus RhizosphereMASSVTVAQVSPANPALQLLKLVPGVLLLAGVGYA
Ga0075424_10200678733300006904Populus RhizosphereMAGSVALPQFQAQSRQPALQYLRVIPGVLLLAAVGYA
Ga0099794_1044228313300007265Vadose Zone SoilMADAIALPQAKPAQPTLQFLRVIPGVLLLAAVGYA
Ga0066710_10069113933300009012Grasslands SoilMADVLTVPEVQPGQPAFRYLRVIPGVLLLFAIGYAGKLLEQ
Ga0099829_1064150413300009038Vadose Zone SoilMSDIITVPQVRPVQPVLRFLRVVPGVILLAAIGYAGKLLEQNVGAYAKAHHWTFPN
Ga0099828_1084483113300009089Vadose Zone SoilMADAIALPQAKPAQPTLQFLRVIPGVLLLAAVGYAGKL
Ga0126372_1324055513300010360Tropical Forest SoilMSQAAVALPQVRSSNRAWNFLRLVPGIALLAAIGYAGKLLEQNV
Ga0150983_1499031733300011120Forest SoilMADVITVPQVQPVQPALKFLRVIPGVLLLAAIGYAGKLLE
Ga0137391_1024138543300011270Vadose Zone SoilMSDVITVPQVRPVQPVLRFLRVVPGVILLAAIGYAGKLLEQ
Ga0137393_1052956813300011271Vadose Zone SoilMGDVVAVPQVRPVQPALRFLRVIPGVLLLAAVGYAGKLL
Ga0137393_1092167133300011271Vadose Zone SoilMADVITVPRVQPVQPALRFLRVIPGVLLLAAVGYAGKLLE
Ga0137365_1111849733300012201Vadose Zone SoilMADAITVPQVQPVQPALRFLRVIPGIVLLAGVGYAGKLLEQNVG
Ga0137363_1000752313300012202Vadose Zone SoilMADAIALPQSRPAQPAIQFFRVIPGVLLLAGVGYAGKL
Ga0137363_1106578713300012202Vadose Zone SoilMASSIAISQVRPVNPALRFLKIVPGVLLLAAVGYAGKLLEAN
Ga0137380_1002771613300012206Vadose Zone SoilMAGTVALPQVRPVNPALQFLKVIPGVLLLAAVGYAGKLLE
Ga0137380_1069596733300012206Vadose Zone SoilMSDVITVPQVRPVQPVLRFLRVVPGVILLAGIGYAGKLL
Ga0137381_1173002213300012207Vadose Zone SoilMADAITVPQVQPVQPAWRFLRVIPGIFLLAAVGYAGKL
Ga0137371_1119580613300012356Vadose Zone SoilMADVITVPQVRPVQPALRFLRVIPGVLLLAAVGYAGKLLEQN
Ga0137360_1185095913300012361Vadose Zone SoilMADVITVPQVQPVQPALRFLRVFPGVLLLAGVGYAGKLLE
Ga0137390_1076963113300012363Vadose Zone SoilMSDVISVPQVQPVQPVLRFLRVVPGVILLAAIGYAGKLLEQNVGAYAKAHHWT
Ga0134022_107038013300012371Grasslands SoilMADVITVPQVRPVQPALRFLRVIPGVLLLAAVGYAGKL
Ga0134026_107260313300012381Grasslands SoilMADVLTVPQVQPVQPAFRYLRVIPGVLLLFAIGYAGKLLEQNVGGYAK
Ga0137358_1108431813300012582Vadose Zone SoilMADAITVPQVQPVQPALRFLRVVPGILLLAAVGYAGKLLEQNV
Ga0137397_1039845813300012685Vadose Zone SoilMADAITVAQVQPVQPALRFLRVIPGVLLLAAVGYAGKLLEQN
Ga0137419_1053889513300012925Vadose Zone SoilMASSIAFAQVRPVNPALQFLKIVPGVLLLAAVGYAGKLLEANVGK
Ga0137404_1074277233300012929Vadose Zone SoilMADVITVPQVRLVQPALRFLRVIPGVLLLAAVGYAGK
Ga0137404_1099589123300012929Vadose Zone SoilMASSIALPRTRTEQPALQFLRVIPGVLLLGAVGYA
Ga0134081_1007309433300014150Grasslands SoilMADVITIPHVRPVQPALRLLRVIPGVLLLAAVGYAG
Ga0137409_1136844513300015245Vadose Zone SoilMAGTVALPQVRPVNPALQFAKVIPGVLLLAAVGYAG
Ga0182034_1173243813300016371SoilMADVIVIPQAQPVETRLPFLRVIPGVLLLAAVGYGGKFLEQN
Ga0182034_1208011233300016371SoilMASSMAISQLRSGNPALQFLKVAPGVLLLAAIGYAGKLLE
Ga0187821_1000146813300017936Freshwater SedimentMASSVAIAQVRPVNPALNFVKLIPGVLLLAGIGYAGKLLEANVGKY
Ga0187819_1021347713300017943Freshwater SedimentMADVITVPQVQTAQPGLRFLRVIPGVLLLGAIGYAGKL
Ga0187767_1007540233300017999Tropical PeatlandMADVITVPQVQPVQPALRFLRIIPGVLLLGAIGYAGKLLEQNVGAYAKAHHW
Ga0187769_1002596263300018086Tropical PeatlandMADAVAVPQVQPLQPVLRVLRILPGVLLLAAIGYGGKLLEQDVGAF
Ga0066667_1111401213300018433Grasslands SoilMADVITVPQVQPVQPALRFLRVIPGVLLLAAVGYAGKLLEQN
Ga0179594_1021470033300020170Vadose Zone SoilMADVITVPQVQPVQPALRFLRVIPGVLLLAAVGYAGKLLEQ
Ga0210407_1000420313300020579SoilMADAVAVSQVQPLQPALRFLRVIPGVLLLAAIGYAGKLLEQNLGAYAKAHHWVFP
Ga0210407_1006951653300020579SoilMADVVVVPQVKPVQPALRFLRIIPGVLLLAAIGYAGKLVEQNVGAYAKAHHWVFPN
Ga0210407_1126309233300020579SoilMADVITVPQVQPVQPALRFFRVIPGVLLLAAVGYTGKLLEQNVGAYA
Ga0210399_1056453723300020581SoilMADAVAVPQVQPLQPALRFVRVIPGVLLLAAIGYAGKLLEQ
Ga0210401_1090207913300020583SoilMADAVVVPQVQPLQPALRFLRVIPGVLLLAAIGYAGK
Ga0210406_1067266213300021168SoilMADVITVPQVRPAQPTLQFLRVIPGILLLAAVGYA
Ga0210393_1082258613300021401SoilMADVVVVPQVKPVQPALRFLRIIPGVLLLAAIGYAGKLLEQNVGAYAKAHHWVFPN
Ga0210387_1060612013300021405SoilMADAVVVPQVQPLQPALRFVRVIPGVLLLAAIGYAGKLLEQNLGAYAKAHH
Ga0210386_1173704033300021406SoilMADVVVVPQVKPVQPALRFLRIIPGVLLLAAIGYAGK
Ga0210383_1104024733300021407SoilMADAVVIPQVQPMQPALRFLRLIPGVLLLAAIGYAGKLLEQNVGRYAKAHHWVFPN
Ga0210402_1084332733300021478SoilMADVITVPQVQPVQPALRLLRVIPGVLLLAAIGYA
Ga0210402_1185887033300021478SoilMADAVAVPQVQPWQPALRFLRVIPGVLLLAAIGYAGKLLEQNLGAYAKAHHWVFPNI
Ga0210409_1168166713300021559SoilMADVVTVPQVQPVQPALRFLRVIPGVLLLAAVGYAGKLL
Ga0242655_1021781913300022532SoilMADVITVPHVQPAQPALRFLRVIPGVLLLAAIGYAGKL
Ga0242655_1030137713300022532SoilMAEVITVPQVQPVQPALRFLRVIPGVLLLAAVGYAGKL
Ga0224564_108516313300024271SoilMADAVVIPQVQPVQPALRFLRLIPGVLLLAAIGYAGKLLEQNVGRYAKAHHWVFP
Ga0224564_108763633300024271SoilMADAVVIPQVQPVQPALRFLRLIPGVLLLAAIGYAGKLLEQNVGRYAKAQHWV
Ga0137417_127319613300024330Vadose Zone SoilMAEAITVPQVRPVQPALRFLRVIPGVLLLAAVGYA
Ga0137417_1502140103300024330Vadose Zone SoilMAEAITVPQVRPVQPALRFLRVIPGVLLLAAVGYAGQTA
Ga0207663_1119006613300025916Corn, Switchgrass And Miscanthus RhizosphereMASSVAVAQVRPVNPALQFLKLVPGVLLLAGVGYAGKLLE
Ga0207700_1134218533300025928Corn, Switchgrass And Miscanthus RhizosphereMAGSVALPQSQVQSHQPALQFLHVIPGVLLLAGVGYAGKLLEKNLGA
Ga0207711_1198683513300025941Switchgrass RhizosphereMASSVAVAQVRPVNPVLQFLKLVPGVLLLAGVGYAGK
Ga0209268_111408713300026314SoilMADVITVPQVQPVQPALRFLRVIPGVLLLAAVGYAGKLLE
Ga0209806_124404023300026529SoilMADVITVTQVQLVQPVFRYLRAIPGVLLLFAIGYAGK
Ga0207948_101063013300027174Forest SoilMADAVVIPHVQPVQPALRFLRLIPGVLLLAAIGYAGKLLEQNVGKYAKAHHWVF
Ga0209447_1017685813300027701Bog Forest SoilMADAVVIPQVQPVQPALRFLRLIPGVLLLAAIGYAGKLLEQNVGKYAKAHHWVFP
Ga0209656_1032815333300027812Bog Forest SoilMADAVVIPQVQPVQPALRFLRLIPGVLLLAAIGYAGKLLEQNVGKYAKAH
Ga0209180_1063470113300027846Vadose Zone SoilMADVITVPQVQPVQPALRFLRVIPGVLLLAAVGYAG
Ga0209275_1023610013300027884SoilMADAVVIPQVQPVQPALRFLRLIPGVLLLAAIGYAGKLLEQNVGRYAKA
Ga0247675_105641933300028072SoilMASSVTVAQVRPANPGLRFLKLVPGLLLLAGVGYAGKL
Ga0137415_1054394533300028536Vadose Zone SoilMADVITVPQVQPVQPALRFLRVIPGVLLLAAVGYAGKL
Ga0222749_1025883233300029636SoilMADVITVPQVQPVQPALKILRVIPGVLLLAAIGYAGKLLEQNVGAFA
Ga0265770_100109813300030878SoilMADAVVIPQVEPVQPALRFLRLIPGVLLLAAIGYAGKLLEQNVGKYA
Ga0170834_11013310813300031057Forest SoilMADAIALPQARPAQPALQFLRVIPGVLLLAAVGYA
Ga0170823_1019755313300031128Forest SoilMADVITVPQVQPVQPALRFLRVIPGILLLAVVGYAGKL
Ga0170824_10575405433300031231Forest SoilMASSIAVAQVRPVNPALQFLKIVPGVLLLAVVGYAGKL
Ga0170820_1663626933300031446Forest SoilMASSIAISQVRPVNPGLQFLKIVPGVLLLAAVGYAGKLLEANVGKY
Ga0170819_1481406333300031469Forest SoilMADAIVIPQVQPVQPALRFLRIVPGVLLLAAIGYA
Ga0306918_1048498613300031744SoilMADVIVIPQAQPVETRLPFLRVIPGVLLLAAVGYGGKFLEQNVNA
Ga0307477_1063583613300031753Hardwood Forest SoilMADVIVVPQAQPVQPVLRFLRVIPGVLLLAAIGYAGKLLEQNGG
Ga0306923_1057223543300031910SoilMASSVAMVGVRPVNPALQFFRVVPGILLLVAVGYAGKLLESSV
Ga0307479_1169034513300031962Hardwood Forest SoilMADVITVPQVQPVQPALRFLRVIPGVLLLAAVGYA
Ga0307471_10132328613300032180Hardwood Forest SoilMADVITVPQVQPVQPALRLLRVIPGVLLLAAIGYAGKLLEQNVGAFAKAHH
Ga0335073_1008262363300033134SoilMADAVVIPQIQPVQPALRFLRIIPGVLLLAAIGYAG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.