NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F098112

Metagenome / Metatranscriptome Family F098112

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098112
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 78 residues
Representative Sequence MGGIFGSSGKTTNPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIAVV
Number of Associated Samples 96
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 46.15 %
% of genes near scaffold ends (potentially truncated) 97.12 %
% of genes from short scaffolds (< 2000 bps) 91.35 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (94.231 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(20.192 % of family members)
Environment Ontology (ENVO) Unclassified
(32.692 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(66.346 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 51.46%    β-sheet: 0.00%    Coil/Unstructured: 48.54%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF00313CSD 37.50
PF07690MFS_1 7.69
PF02574S-methyl_trans 5.77
PF00294PfkB 5.77
PF13549ATP-grasp_5 0.96
PF13561adh_short_C2 0.96
PF13607Succ_CoA_lig 0.96
PF04185Phosphoesterase 0.96
PF08281Sigma70_r4_2 0.96
PF00037Fer4 0.96
PF05977MFS_3 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0646Methionine synthase I (cobalamin-dependent), methyltransferase domainAmino acid transport and metabolism [E] 5.77
COG2040Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)Amino acid transport and metabolism [E] 5.77
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.96
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 0.96

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.23 %
UnclassifiedrootN/A5.77 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459007|GJ61VE201C779GAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300000890|JGI11643J12802_11970582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2756Open in IMG/M
3300001305|C688J14111_10014016All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2313Open in IMG/M
3300002568|C688J35102_118690500All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium586Open in IMG/M
3300004022|Ga0055432_10014547All Organisms → cellular organisms → Bacteria1548Open in IMG/M
3300004114|Ga0062593_102133150All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium626Open in IMG/M
3300004153|Ga0063455_100003363All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2861Open in IMG/M
3300004156|Ga0062589_100015419All Organisms → cellular organisms → Bacteria3400Open in IMG/M
3300004157|Ga0062590_100942148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria814Open in IMG/M
3300004479|Ga0062595_101301065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium654Open in IMG/M
3300004479|Ga0062595_101634059All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300004479|Ga0062595_102141138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium546Open in IMG/M
3300005104|Ga0066818_1026220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium509Open in IMG/M
3300005162|Ga0066814_10123103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium504Open in IMG/M
3300005186|Ga0066676_10858925All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium611Open in IMG/M
3300005338|Ga0068868_100011238All Organisms → cellular organisms → Bacteria6520Open in IMG/M
3300005353|Ga0070669_100203706All Organisms → cellular organisms → Bacteria1558Open in IMG/M
3300005440|Ga0070705_101147311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium638Open in IMG/M
3300005441|Ga0070700_101170844All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300005450|Ga0066682_10073474All Organisms → cellular organisms → Bacteria2114Open in IMG/M
3300005459|Ga0068867_101859312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium567Open in IMG/M
3300005545|Ga0070695_101072258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium658Open in IMG/M
3300005552|Ga0066701_10222876All Organisms → cellular organisms → Bacteria1161Open in IMG/M
3300005553|Ga0066695_10824339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium534Open in IMG/M
3300005557|Ga0066704_10614768All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300005558|Ga0066698_10062648All Organisms → cellular organisms → Bacteria2379Open in IMG/M
3300005576|Ga0066708_10195713All Organisms → cellular organisms → Bacteria1266Open in IMG/M
3300005618|Ga0068864_100883331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria882Open in IMG/M
3300005764|Ga0066903_102211730All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1061Open in IMG/M
3300005836|Ga0074470_11753911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi531Open in IMG/M
3300006163|Ga0070715_10527045All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium681Open in IMG/M
3300006173|Ga0070716_101036313All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300009012|Ga0066710_101566729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Diaminobutyricimonas → Diaminobutyricimonas aerilata1012Open in IMG/M
3300009012|Ga0066710_102912666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium671Open in IMG/M
3300009036|Ga0105244_10438096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium601Open in IMG/M
3300010047|Ga0126382_12398905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium512Open in IMG/M
3300010322|Ga0134084_10303743All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium594Open in IMG/M
3300010336|Ga0134071_10393465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Diaminobutyricimonas → Diaminobutyricimonas aerilata705Open in IMG/M
3300010337|Ga0134062_10105203All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1215Open in IMG/M
3300010362|Ga0126377_12147196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria635Open in IMG/M
3300010364|Ga0134066_10057149Not Available1021Open in IMG/M
3300010399|Ga0134127_11678511All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium710Open in IMG/M
3300010399|Ga0134127_12715057All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium575Open in IMG/M
3300012200|Ga0137382_11248317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium526Open in IMG/M
3300012211|Ga0137377_11275841All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Diaminobutyricimonas → Diaminobutyricimonas aerilata664Open in IMG/M
3300012351|Ga0137386_10259407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1250Open in IMG/M
3300012386|Ga0134046_1098007All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300012410|Ga0134060_1076498All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300012902|Ga0157291_10298684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium557Open in IMG/M
3300012914|Ga0157297_10070477All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria975Open in IMG/M
3300012955|Ga0164298_11173525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium580Open in IMG/M
3300012958|Ga0164299_10233577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1087Open in IMG/M
3300012958|Ga0164299_10271321All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1026Open in IMG/M
3300012958|Ga0164299_10355036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium924Open in IMG/M
3300012960|Ga0164301_10304812Not Available1074Open in IMG/M
3300012985|Ga0164308_11911340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium553Open in IMG/M
3300012987|Ga0164307_11348554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium598Open in IMG/M
3300012987|Ga0164307_11819481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium516Open in IMG/M
3300013296|Ga0157374_11983570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium608Open in IMG/M
3300014325|Ga0163163_11229186All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium812Open in IMG/M
3300014326|Ga0157380_12210671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium614Open in IMG/M
3300014823|Ga0120170_1034973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1237Open in IMG/M
3300015201|Ga0173478_10512411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium603Open in IMG/M
3300015357|Ga0134072_10173577Not Available727Open in IMG/M
3300015373|Ga0132257_102872787All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300017654|Ga0134069_1113240Not Available890Open in IMG/M
3300018433|Ga0066667_11092258All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300018433|Ga0066667_11479510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia599Open in IMG/M
3300018468|Ga0066662_10790922All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300019269|Ga0184644_1697733All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300025573|Ga0210133_1051989All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium884Open in IMG/M
3300025905|Ga0207685_10306757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium787Open in IMG/M
3300025918|Ga0207662_10158292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1445Open in IMG/M
3300025939|Ga0207665_11039762All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300026089|Ga0207648_12159220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium518Open in IMG/M
3300026095|Ga0207676_12095427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium564Open in IMG/M
3300026306|Ga0209468_1024169All Organisms → cellular organisms → Bacteria2154Open in IMG/M
3300026307|Ga0209469_1127454Not Available597Open in IMG/M
3300026329|Ga0209375_1303209All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300026331|Ga0209267_1247345All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300026528|Ga0209378_1195682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium680Open in IMG/M
3300026529|Ga0209806_1084080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1398Open in IMG/M
3300026532|Ga0209160_1151656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1061Open in IMG/M
3300026540|Ga0209376_1127284All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1255Open in IMG/M
3300026548|Ga0209161_10304535All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium766Open in IMG/M
3300026552|Ga0209577_10577662All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300027870|Ga0209023_10701410All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium582Open in IMG/M
3300028380|Ga0268265_11515838All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300028707|Ga0307291_1122750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium654Open in IMG/M
3300028712|Ga0307285_10023384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1437Open in IMG/M
3300028715|Ga0307313_10202099All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300028719|Ga0307301_10001066All Organisms → cellular organisms → Bacteria7794Open in IMG/M
3300028721|Ga0307315_10053329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1129Open in IMG/M
3300028778|Ga0307288_10342172All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium601Open in IMG/M
3300028814|Ga0307302_10490271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium610Open in IMG/M
3300028872|Ga0307314_10075422All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300028878|Ga0307278_10351928All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium649Open in IMG/M
3300031716|Ga0310813_11316224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium668Open in IMG/M
3300031854|Ga0310904_10447856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria856Open in IMG/M
3300031938|Ga0308175_102843124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium540Open in IMG/M
3300032018|Ga0315272_10488212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium614Open in IMG/M
3300032156|Ga0315295_12142882All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300033551|Ga0247830_11541569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium532Open in IMG/M
3300034090|Ga0326723_0062016Not Available1590Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil20.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil17.31%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil7.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.81%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.88%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.88%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.92%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.92%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.92%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.96%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.96%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.96%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.96%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.96%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.96%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459007Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cmEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004022Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005104Soil and rhizosphere microbial communities from Laval, Canada - mgHACEnvironmentalOpen in IMG/M
3300005162Soil and rhizosphere microbial communities from Laval, Canada - mgLABEnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012386Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012410Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014823Permafrost microbial communities from Nunavut, Canada - A3_80cm_0MEnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019269Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025573Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027870Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032018Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middleEnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
L02_062615102170459007Grass SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVALWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIAVVLGIVGGLGGRGGSTTVLSI
JGI11643J12802_1197058213300000890SoilMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAMV
C688J14111_1001401613300001305SoilMFGSSGKTSNPLGVVGAVVGAIGAGFSVLLWLYHFNPDSTILGSYSAQMVHGGQLADQLGTLAIVFGGIAVVLGIIGGLGGRGGGSTVLSIIL
C688J35102_11869050013300002568SoilMFGSSGKTSNPLGVVGAVVGAIGAGFSVLLWLYHFNPDSTILGSYSAQMVHGGQLADQLGTLAIVFGGIAVVLG
Ga0055432_1001454733300004022Natural And Restored WetlandsMAGMFGSSGHTTNPMGTVGTLVGAIGAAFSTILWIYQFNPESSILGSYSIQIAAGGPMADQLST
Ga0062593_10213315023300004114SoilMAGIFGSSGKTANPAGTIGSLVGVIGAAFSALLWLYHFNPDTTLLGKYSTQMAAGGQMADQLGLLAFWFGAIAIVLGIIAGLGGRGGSTSVMSILLGI
Ga0063455_10000336343300004153SoilMFGSSGKTSNPLGVVGAVVGAIGAGFSVLLWLYHFNPDSTILGSYSAQMVHGGQLADQLGTLAIVFGGIAVVLGIIGGLGGRGGGSTVL
Ga0062589_10001541913300004156SoilMFGSSGKTSNPLGTVGALVGAIGASFSVILWIYRFSPDSTLLGSYSGQMGPGGTLPGQLGALALLFGAMAIVLGIVGGLGGRGGASTIASILFGI
Ga0062590_10094214823300004157SoilMAGMFGSSGKTSNPMGTVGTLVGVIGAAFSAILWIYQFNPDSSLLGSYSIQITNNGPMADQLSTLALVFGLIAVVMGIAGGLGG
Ga0062595_10130106523300004479SoilMAGIFGSSGKTANPAGTIGSLVGVIGAAFSALLWLYHFNPDTTLLGKYSTQIAAGGQMADQLGLLAFWFGAI
Ga0062595_10163405913300004479SoilMFGSSGKTSNPLGVVGAVVGAIGAGFSFLLWLYHFNPDSTLLGSYSAQMIHGGQLSDQLGTLAIVFGGIAVVLGIIGGLGGRGAGSTVLSIIL
Ga0062595_10214113813300004479SoilMAGMFGSSGKTSNPMGTVGTLVGVIGAAFSAILWIYQFNPDSSLLGSYSIQITNNGPMADQLSTLALVFGLIAVVMGIAGGLGGRGT
Ga0066818_102622013300005104SoilMGGIFGSSGKTANPAGTVGCLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAMIFGAIAVVLG
Ga0066814_1012310323300005162SoilMAGMFGSSGKTSNPLGVVGAVVGAIGAGFSALLWLYHFNPDSTILGSYSAQMVHGGQLADQLGTLAIVFGAIAVV
Ga0066676_1085892523300005186SoilLLRSRPWRIIGPDMSGIFGSSGKTANPAGTVGSLVGVIGAVFSAILWLYHFNPDSSLLGKYSQQLAAGAQMVDQLGLLAF
Ga0068868_10001123813300005338Miscanthus RhizosphereMFGSSGKTSNPLGVVGAVVGAIGAGFSILLWLYHFNPDSTILGSYSAQMIHGGQLADQLGTLAIVFGGIAVV
Ga0070669_10020370613300005353Switchgrass RhizosphereMGGIFGSSGKTANPAGTVGCLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLA
Ga0070705_10114731123300005440Corn, Switchgrass And Miscanthus RhizosphereMFGSSGKTSNPLGVVGAVVGAIGAGFSILLWLYHFNPDSTILGSYSAQMIHGGQLADQLGTLAIVFGGIAVVLGII
Ga0070700_10117084423300005441Corn, Switchgrass And Miscanthus RhizosphereMFGSSGKTSNPLGVVGAVVGAIGAGFSILLWLYHFNPDSTLLGSYSAQMIHGGQLSDQLGTLAIVFGGIAVVLGIIGGLGGRGAGSTVLSII
Ga0066682_1007347453300005450SoilMGGIFGSSGKTTNPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIAVVLGIVGGLGGRGGSTT
Ga0068867_10185931213300005459Miscanthus RhizosphereMAGMFGSSGKTSNPLGVVGAVVGAIGAGFSALLWLYHFNPDSTILGSYSAQMVHGGQLADQLGTLAIVFGAIAVVLGIIG
Ga0070695_10107225813300005545Corn, Switchgrass And Miscanthus RhizosphereMFGSSGKTSNPLGVVGAVVGAIGAGFSILLWLYHFNPDSTILGSYSAQMIHGGQLADQLGTLAIVFG
Ga0066701_1022287613300005552SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSHQLAAGGQMADQLGLLAVVFGAIAVV
Ga0066695_1082433913300005553SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIAVVLGIVGGLGGRG
Ga0066704_1061476813300005557SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVALWIYHFNPDSTLLGKYSQQLAAGGQMADQLGL
Ga0066698_1006264843300005558SoilMSGIFGSSGKTANPAGTVGSLVGVIGAVFSAILWLYHFNPDSTLLGKYSQQLAAGGQMVDQLGLLAFWFGAI
Ga0066708_1019571313300005576SoilMGGIFGSSGKTTNPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIAVVLGIVGGLGGRGGSTTVLSILL
Ga0068864_10088333123300005618Switchgrass RhizosphereMAGMFGSSGKTSNPMGTVGTLVGVIGAAFSAILWIYQFNPDSSLLGSYSIQITNNGPMADQLSTLALVFGL
Ga0066903_10221173013300005764Tropical Forest SoilMFSSSGKTSNPLGVVGAVVGAIGAGFSILLWLYHFNPDSTILGSYSAQMSHGGQLASQLGTLAIVFGALAVLLGI
Ga0074470_1175391113300005836Sediment (Intertidal)MAGMFGSSGHTTNPMGTVGTLVGAIGAAFSVILWIYQFNPDSSLLGSYSVQIAAGGPMADQLSTLA
Ga0070715_1052704513300006163Corn, Switchgrass And Miscanthus RhizosphereMFGSSGKTSNPLGVVGAVVGAIGAGFSILLWLYHFNPDSTILGSYSAQMTQGGQLASQLGTLAIVFGALAVLLGIIGG
Ga0070716_10103631323300006173Corn, Switchgrass And Miscanthus RhizosphereMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQ
Ga0066710_10156672913300009012Grasslands SoilMGGIFGSSGKTVNPAGTVGSLVGAIGAAFSAVLWIYHFNPDSTLLGKYSQQLAAGGQMSDQMRLLAFVFGAIAVVLGIVAGLG
Ga0066710_10291266613300009012Grasslands SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIAVVLGIVGGLGGRGGSTTV
Ga0105244_1043809613300009036Miscanthus RhizosphereMFGSSGKTSNPLGVVGAVVGAIGAGFSILLWIYHFNPDATILGSYSAQMVHGGQLSDQLGLLAIVFGAIAVVLGIVGG
Ga0126382_1239890523300010047Tropical Forest SoilMFGSSGKTSNPLGVVGAVVGAIGAGFSVLLWLYHFNPDSTILGSYSAQMVHGGQLADQLGTLAIVFGGIAVVLGIIGGLGGRG
Ga0134084_1030374313300010322Grasslands SoilMGGIFGSSGKTTNPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGGIAVVLGIVGGLGGRGGSTTVMS
Ga0134071_1039346513300010336Grasslands SoilMGGIFGSSGKTVNPAGTVGSLVGAIGAAFSVILWIYHFNPDSTLLGKYSQQLAAGGQMSDQMRLLAFVFGAIAVV
Ga0134062_1010520313300010337Grasslands SoilMGGIFGSSGKTTNPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVF
Ga0126377_1214719613300010362Tropical Forest SoilLPRPDPRRIIAAMSGIFGSSGKTANPAGTVGTLVGVIGAAFSAVLWLYHFNPDSTLLGKYSQQMVAGGQMADQL
Ga0134066_1005714913300010364Grasslands SoilMGGIFGSSGKTTNPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIA
Ga0134127_1167851113300010399Terrestrial SoilMFGSSGKTSNPLGVVGAVVGAIGAGFSILLWLYHFNPDSTILGSYSAQMIHGGQLADQLGTLAIVFGGIAVVLGIIGGLGGRG
Ga0134127_1271505713300010399Terrestrial SoilMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGRYSQQLAAGGQMADQLGLLAMVFGGIAVVLGIVGGLG
Ga0137382_1124831713300012200Vadose Zone SoilMRMGGIFGSSGKSANPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTILGKYSQQLAAGGQMADQLGLLAVVFGAIAVVLGIVGGLGGRGGSTTV
Ga0137377_1127584123300012211Vadose Zone SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVALWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIAVVLGIV
Ga0137386_1025940713300012351Vadose Zone SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVVLWIYYFNPDSPLLGKYSQHLAAGGQIADQLGLL
Ga0134046_109800713300012386Grasslands SoilMGGIFGSSGKTTNPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIAVVLGIVGGLGGRGGSTKVLSIL
Ga0134060_107649813300012410Grasslands SoilMGGIFGSSGKSANPAGTVGSLVGAIGAAFSVILWIYHFNPDSTLLGKYSQQLAAGGQMSDQMRLLAFVF
Ga0157291_1029868413300012902SoilMAGMFGSSGKTSNPMGTVGTLVGVIGAAFSAILWIYQFNPDSSLLGSYSIQITNSGPMADQLSTLALVFGLIAVIMGIA
Ga0157297_1007047723300012914SoilMAGMFGSSGKTSNPMGTVGTLVGVIGAAFSAILWIYQFNPDSSLLGSYSIQITNSGPMADQLSTLARDIGAQAKAATP*
Ga0164298_1117352513300012955SoilMAGMFGSSGKAGNPLGLVGAIVGAIGAGFSVLLWIYHFNPDATILGSYSAQMIHGGQLADQLGTLAIVFGGLAVVLGIIGGLGGRG
Ga0164299_1023357713300012958SoilMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAIVFGGIAVVLGIVGGLGGRGGSTTVM
Ga0164299_1027132123300012958SoilMAGMFGSSGKAGNPLGLVGAIVGAIGAGFSVLLWIYHFKPDATILGSCSAQMIHGGQLADQLGTLAIVFGGLAV
Ga0164299_1035503623300012958SoilMAGMFGSSGKTSNPLGVVGAVVGAVGAGFSALLWLYHFNPDSTIRGSYSAQMVHGGQLADQLGTLAIVFGAIAVVLGIIGGLGGRGAGSTVLSI
Ga0164301_1030481213300012960SoilMGGIFGSSGKTANPAGTVGCLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAMVFG
Ga0164308_1191134013300012985SoilMAGMFGSSGKTSNPLGVVGAVVGAIGAGFSALLWLYHFNPDSTILGSYSAQMVHGGQLADQLGTLAIVFGAI
Ga0164307_1134855413300012987SoilMAGMFGSSGKAGNPLGLVGAIVGAIGAGFSVLLWIYHFNPDATILGSYSAQMIHGGQLADQLGTLAIVFGGLAV
Ga0164307_1181948123300012987SoilMFGSSGKTSNPLGVVGAVVGAIGAGFSVLLWIYHFNPDATILGSYSAQMIHGGQLSDQLGLLAIVFGAIAVVLGI
Ga0157374_1198357013300013296Miscanthus RhizosphereMFGSSGKTSNPLGVVGAVVGAIGAGFSILLWIYHFNPDATILGSYSAQMVHGGQLSDQLGLLAIVFGAIAVVLGIVGGLGGRGAGSTVL
Ga0163163_1122918613300014325Switchgrass RhizosphereMAGMFGSSGKTSNPMGTVGTLVGVIGAAFSAILWIYQFNPDSSLLGSYSIQITNNGPMADQLSTLALVFGLIAVVMGIAGGLGGRGTSSTIAS
Ga0157380_1221067113300014326Switchgrass RhizosphereMFGSSGKTSNPLGVVGAVVGAIGAGFSILLWLYHFNPDSTILGSYSAQMIHGGQLADQLGTLAI
Ga0120170_103497343300014823PermafrostMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIA
Ga0173478_1051241113300015201SoilMAGMFGSSGKTSNPMGTVGTLVGVIGAAFSAILWIYQFNPDSSLLGSYSIQITNSGPMADQLSTLALVFGLIAVVMG
Ga0134072_1017357723300015357Grasslands SoilMGGIFGSSGKTTNPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIAVV
Ga0132257_10287278713300015373Arabidopsis RhizosphereMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWVYHFNPDSTLLGRYSQQLAAGGQMADQLGLLAMV
Ga0134069_111324033300017654Grasslands SoilMGGIFGSSGKTTNPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMA
Ga0066667_1109225823300018433Grasslands SoilMGGIFGSSGKSANPAGTVGSLVGAIGAAFSVILWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAMIFGAIAVVLGIVGGLGGRGGSTTVLSILLGI
Ga0066667_1147951023300018433Grasslands SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTILGKYSQQLAAGGQMADQLGLLAVVFGAIAVVL
Ga0066662_1079092213300018468Grasslands SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVALWIYHFNPDSTLLGKYSQQLAAGGQMAD
Ga0184644_169773313300019269Groundwater SedimentMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAMIFGGIAVVLGIVGGLGGR
Ga0210133_105198913300025573Natural And Restored WetlandsMTGIYGSSGKTVNPLGTIGVVVGGLGAAFSALLWIYHFQPNATILGSYSAQMAEGGAMASQFGTLALVFGM
Ga0207685_1030675723300025905Corn, Switchgrass And Miscanthus RhizosphereMFGSSGKTSNPLGVVGAVVGAIGAGFSILLWLYHFNPDSTILGSYSAQMTQGGQLASQLGTLAIVFGALAVLLGIIGGLGGR
Ga0207662_1015829243300025918Switchgrass RhizosphereMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLG
Ga0207665_1103976223300025939Corn, Switchgrass And Miscanthus RhizosphereMAGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQ
Ga0207648_1215922023300026089Miscanthus RhizosphereMAGMFGSSGKTSNPLGVVGAVVGAIGAGFSALLWLYHFNPDSTILGSYSAQMVHGGQLADQLGTLAIVFGAIAVVLGIIGGLGGRGAGST
Ga0207676_1209542713300026095Switchgrass RhizosphereMAGMFGSSGKTSNPMGTVGTLVGVIGAAFSAILWIYQFNPDSSLLGSYSIQITNNGPMADQLST
Ga0209468_102416913300026306SoilMGGIFGSSGKTTNPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIAVVLGIVGGLGGRGG
Ga0209469_112745423300026307SoilMGGIFGSSGKTTNPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFG
Ga0209375_130320913300026329SoilMSGIFGSSGKTANPAGTVGSLVGAIGAVFSALLWLYHYNPDSTLLGKYSPQMAAGGQMADQLGLLAFWFGAI
Ga0209267_124734513300026331SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSHQLAAGGQMADQLGLLAVVFGAIAV
Ga0209378_119568223300026528SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSHQLAAGGQMADQLGLLAVVFGAIAVVLGIVGGLGGRGGSTTVL
Ga0209806_108408013300026529SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVALWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIAVVLGIVGGLGGRGGSTAMPHGSTGA
Ga0209160_115165633300026532SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVALWIYHFNPDSTLLGKYSQQLAAGGQMA
Ga0209376_112728413300026540SoilMGGIFGSSGKTTNPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAVVFGAIAVVLGIVGGLGGRGGST
Ga0209161_1030453523300026548SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSHQLAAGGQMADQLGLLAVVFGAIAVVLGIVGGLGGRGGSTTVLSILLGI
Ga0209577_1057766223300026552SoilMGGIFGSSGKTANPAGTVGSLVGAIGAAFSVVLWIYHFNPDSTLLGKYSHQLAAGGQMADQLGLLAVVFGA
Ga0209023_1070141023300027870Freshwater And SedimentMFGSSGKTTNPLGTVGTLVGAIGAAFSVILWIYQFNPDSSLLGTYSIQIANGGPMADQLSTLALVFGAIAVVAGIAGGLGGRGTGSTVASILLG
Ga0268265_1151583813300028380Switchgrass RhizosphereMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGRYSQQLAAGGQMADQLGLLAM
Ga0307291_112275013300028707SoilMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAMIFGGIAVVLGIVGGLGGRGGSTTV
Ga0307285_1002338413300028712SoilMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMAD
Ga0307313_1020209913300028715SoilMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAMI
Ga0307301_10001066103300028719SoilMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAMIFGGI
Ga0307315_1005332943300028721SoilMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGL
Ga0307288_1034217223300028778SoilMAGMFGSSGKTSNPMGTVGTLVGVLGAAFSAILWIYQFNPDSSLLGSYSIQITNSGPMADQLSTLALVFGLIAVIMGIAGG
Ga0307302_1049027123300028814SoilMAGMFGSSGKTSNPMGTVGTLVGVLGAAFSAILWIYQFNPDSSLLGSYSIQITNSGPMADQLSTLALVFGLIAVIMGIAGGLG
Ga0307314_1007542233300028872SoilMGGIFGSSGKTANPAGTVGSLVGAIGAGFSVVLWIYHFNPDSTLLGKYSQQLAAGGQMADQLGLLAMVFGGIAVVLGIVG
Ga0307278_1035192813300028878SoilMSGIFGSSGKTANPAGTVGSLVGAIGGAFSAILWLYHFNPDSTLLGKYSQQLAAGGQLADQMRLLAIVFGAIAVVLGIVAGLGGRGNGT
Ga0310813_1131622423300031716SoilMFGSSGKTSNPLGVVGAVVGAIGAGFSILLWIYHFNPDSTILGSYSAQMVHGGQLADQLGTLAIVFGAIAVMLGIIGGLGGRG
Ga0310904_1044785623300031854SoilMFGSSGKTSNPMGTVGTLVGVIGAAFSVILWIYQFNPDSSLLGSYSIQITNSGPMADQLSTLALVFGLIAV
Ga0308175_10284312423300031938SoilMFGSSGKTSNPLGVVGAVVGAIGAGFSVLLWLYHFNPDSTILGSYSAQMTHGGQLAGQLGTLAIVFGALAVLLGIIGGLGGRGAGS
Ga0315272_1048821213300032018SedimentMGGMFGSSGKTSNPMGTVGTLVGVIGAAFSVILWIYQFNPDSSILGSYSVQVASGGPMADQLSTLALVFGLIALVMGIAGGLGGRGNSST
Ga0315295_1214288213300032156SedimentMFGSSGKTSNPMGTVGTLVGVIGAAFSVILWIYQFNPDSSILGSYSVQVASGGPMADQLSTLALVFGLIALVM
Ga0247830_1154156913300033551SoilMPGIYGSSGKTANPLGTIGVVVGVIGAAFSVLLWIYRFNPNANLLGSYSIQMGQNGAMSSQLGTLALVFGMIAVVLGIA
Ga0326723_0062016_2_2593300034090Peat SoilLTCGIIGPDMSGIYGSSGKTANPAGTIGVLVGVIGAAFSAILWFYHFNPTSALLGSYSAELAAGGQLADQLRLLALVLGGIAVVLG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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