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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F098141 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 104 |
| Average Sequence Length | 67 residues |
| Representative Sequence | MNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR |
| Number of Associated Samples | 82 |
| Number of Associated Scaffolds | 104 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.00 % |
| % of genes from short scaffolds (< 2000 bps) | 0.96 % |
| Associated GOLD sequencing projects | 74 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.64 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (25.961 % of family members) |
| Environment Ontology (ENVO) | Unclassified (38.462 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (52.885 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 21.87% β-sheet: 14.58% Coil/Unstructured: 63.54% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.64 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 104 Family Scaffolds |
|---|---|---|
| PF00392 | GntR | 39.42 |
| PF00589 | Phage_integrase | 1.92 |
| PF08388 | GIIM | 1.92 |
| PF04185 | Phosphoesterase | 1.92 |
| PF00106 | adh_short | 0.96 |
| PF13701 | DDE_Tnp_1_4 | 0.96 |
| PF01609 | DDE_Tnp_1 | 0.96 |
| PF00665 | rve | 0.96 |
| PF02899 | Phage_int_SAM_1 | 0.96 |
| PF04545 | Sigma70_r4 | 0.96 |
| PF12728 | HTH_17 | 0.96 |
| PF05065 | Phage_capsid | 0.96 |
| PF03704 | BTAD | 0.96 |
| PF02518 | HATPase_c | 0.96 |
| COG ID | Name | Functional Category | % Frequency in 104 Family Scaffolds |
|---|---|---|---|
| COG3511 | Phospholipase C | Cell wall/membrane/envelope biogenesis [M] | 1.92 |
| COG2801 | Transposase InsO and inactivated derivatives | Mobilome: prophages, transposons [X] | 0.96 |
| COG2826 | Transposase and inactivated derivatives, IS30 family | Mobilome: prophages, transposons [X] | 0.96 |
| COG3039 | Transposase and inactivated derivatives, IS5 family | Mobilome: prophages, transposons [X] | 0.96 |
| COG3293 | Transposase | Mobilome: prophages, transposons [X] | 0.96 |
| COG3316 | Transposase (or an inactivated derivative), DDE domain | Mobilome: prophages, transposons [X] | 0.96 |
| COG3385 | IS4 transposase InsG | Mobilome: prophages, transposons [X] | 0.96 |
| COG3629 | DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain | Transcription [K] | 0.96 |
| COG3947 | Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains | Transcription [K] | 0.96 |
| COG4584 | Transposase | Mobilome: prophages, transposons [X] | 0.96 |
| COG4653 | Predicted phage phi-C31 gp36 major capsid-like protein | Mobilome: prophages, transposons [X] | 0.96 |
| COG4973 | Site-specific recombinase XerC | Replication, recombination and repair [L] | 0.96 |
| COG4974 | Site-specific recombinase XerD | Replication, recombination and repair [L] | 0.96 |
| COG5421 | Transposase | Mobilome: prophages, transposons [X] | 0.96 |
| COG5433 | Predicted transposase YbfD/YdcC associated with H repeats | Mobilome: prophages, transposons [X] | 0.96 |
| COG5659 | SRSO17 transposase | Mobilome: prophages, transposons [X] | 0.96 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300012951|Ga0164300_10178438 | Not Available | 1021 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 25.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 8.65% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 7.69% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 7.69% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.77% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 5.77% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 5.77% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 3.85% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 2.88% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.88% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 2.88% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.88% |
| Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil | 1.92% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 1.92% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.92% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.92% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 0.96% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.96% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.96% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 0.96% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.96% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.96% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.96% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.96% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.96% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.96% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2170459023 | Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition) | Environmental | Open in IMG/M |
| 2189573003 | Grass soil microbial communities from Rothamsted Park, UK - FE2 (NaCl 30g/L 5ml) | Environmental | Open in IMG/M |
| 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
| 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
| 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
| 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
| 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
| 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
| 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
| 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
| 3300005537 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 | Environmental | Open in IMG/M |
| 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
| 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
| 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
| 3300006057 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012 | Environmental | Open in IMG/M |
| 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Environmental | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
| 3300006354 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 | Environmental | Open in IMG/M |
| 3300006574 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006577 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006579 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006581 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006605 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
| 3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
| 3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
| 3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
| 3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
| 3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
| 3300012201 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
| 3300012350 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG | Environmental | Open in IMG/M |
| 3300012924 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
| 3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
| 3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
| 3300015242 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300018431 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104 | Environmental | Open in IMG/M |
| 3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
| 3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
| 3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
| 3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027765 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes) | Environmental | Open in IMG/M |
| 3300027857 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028819 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153 | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| 3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
| 3300032770 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5 | Environmental | Open in IMG/M |
| 3300032892 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| FA3_01737170 | 2170459023 | Grass Soil | PPDPLAPLRGQFPAWEAWRGIGGVLYARRRKTSPPVVFRDVTGEGLARQIREWERQRLPG |
| FE2_08531490 | 2189573003 | Grass Soil | MADHSSHQHPAHRPPDPLAPLRGQFPRWEAWRGVGGLLYARLRKSSPPVVFRDVTGEGLARQIREWEGNRLV |
| Ga0070682_1005646153 | 3300005337 | Corn Rhizosphere | VNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0070661_1009819082 | 3300005344 | Corn Rhizosphere | MNDHPSPQPAPHDPLAALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0070709_101329463 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDHPSPQPAPHDPLAVLRGQFPGWECWRGVSGILYVRRRMSSPPVVFRDVTGEGLARQIREWERQRS* |
| Ga0070709_109481671 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | PHDPLAALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIRGYEARQR* |
| Ga0070709_109534562 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MDDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLVEQIREHEARQR* |
| Ga0070709_111293841 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MDDHSSPPPAPHDPLALLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTARSLAEQIREHEARQQ* |
| Ga0070709_115813321 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDHSSPQPAPHDPLAALRGQFPGWEAWRGVSGLLYVRRRMSSPPVVFRGYTAKSLA |
| Ga0070714_1000393263 | 3300005435 | Agricultural Soil | MNDHPSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHETRQR* |
| Ga0070714_1003649711 | 3300005435 | Agricultural Soil | VNDHPSPQPAPHDPLAALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIRGYEARQR* |
| Ga0070714_1014537142 | 3300005435 | Agricultural Soil | VNDHPSPQPAPHDPLTALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHERRRR* |
| Ga0070713_1014376601 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MSDHSSHQHPAHQPPDPLAPLRGQFPRWEAWRGVGGLLYARLRKSSPPVVFRDVTGEGLARQIREWEARQR* |
| Ga0070710_100659824 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQI |
| Ga0070710_101829554 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDHPSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIRGYEARQR* |
| Ga0070711_1000159355 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDHPSPQPAPHDPLTALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIRAHEARQR* |
| Ga0070711_1000173903 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDHPSPQPAPHDPLAVLPGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHETRQR* |
| Ga0070711_1000572525 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | VNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHE |
| Ga0070711_1011240042 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | DPLAALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIRGYEARQR* |
| Ga0070706_1000170116 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | VDDHSSHQHPAHQPPDPLAPLRGQFPRWEAWRGVSGLLYVRLRRSSPPVVFRDVTGEGLARQIREWEARQR* |
| Ga0070706_1016162911 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MGDHSSHQHPAHQPPDPLAPLRGRFPRWEAWRGIGGLLYARLRKSSPPVVFRDVTGEGLACQIREWEREHR* |
| Ga0070707_10000115825 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | VDNSIPPAPDDWPGALLGQFPGWETWRGVSGVLYVRRRKSSPPVVFRDTTVEGLIRQIREYQAGEPK* |
| Ga0070707_1016127902 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | QPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0070698_1013329971 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MGDHSSHQHPAHQPPDPLAPLRGQFPGWEAWRGVGGVLYARRRKTSPPVVFRDVTGEGLARQIREWEREHR* |
| Ga0070697_1007800082 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | VNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHETRHR* |
| Ga0070730_1000627116 | 3300005537 | Surface Soil | MSRAPAAALAPLIGKFPGWECWQSIAGLLYARRRKSSPPVVFRDVTAEGLARQIREWEGNRPV* |
| Ga0070704_1019718252 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | VNDHSSPQPAPHDALAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0068855_1021128872 | 3300005563 | Corn Rhizosphere | MNDHPSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0070664_1022149481 | 3300005564 | Corn Rhizosphere | PLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0066903_1013868402 | 3300005764 | Tropical Forest Soil | MNDPASRQPAPHDPLTVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKALAEQIREYEARRR* |
| Ga0075028_1006010911 | 3300006050 | Watersheds | MNDPASRQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0075026_1007775652 | 3300006057 | Watersheds | VNDHPSPQPASHDPLAALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQI |
| Ga0070715_101943813 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MDDHSSPPPAPHDPLALLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIRGYEARQR* |
| Ga0070715_105902602 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MKNPTDQPADPLAELRALLAGEFPRWEAWRGVIAGMLYARRRKSSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0070712_1000431001 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDHPSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAE |
| Ga0070765_1005949232 | 3300006176 | Soil | VSRAPAAALAPLIGKFPGWECWQGIAGLLYARRRKSSPPVVFRDVTGEGLARQIREWEREHR* |
| Ga0075021_107524652 | 3300006354 | Watersheds | MNDPASRQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREYEARQR* |
| Ga0074056_117908212 | 3300006574 | Soil | VNDHPSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMSSPPVVFRGWTAEAVAKQIHEHEQRRA* |
| Ga0074050_117392352 | 3300006577 | Soil | VNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAESLAEQIREYERRQR* |
| Ga0074050_117452382 | 3300006577 | Soil | MNDPASPQPASHDPLAGLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKAVADQIREHEARQQ* |
| Ga0074054_121568911 | 3300006579 | Soil | MNDPASHQPAPHDPLTALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHESRQQ* |
| Ga0074048_132047341 | 3300006581 | Soil | QPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAESLAEQIREYERRQR* |
| Ga0074057_121747492 | 3300006605 | Soil | MNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQQ* |
| Ga0079222_107830503 | 3300006755 | Agricultural Soil | MNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMSSPPVVFRGYTAKSLAEQ |
| Ga0079221_103766553 | 3300006804 | Agricultural Soil | MDDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0079220_105795632 | 3300006806 | Agricultural Soil | MNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMSSPPVVFRGWTAEAVAKQIHEHEQRRA* |
| Ga0079220_114519021 | 3300006806 | Agricultural Soil | DHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0075425_1018187511 | 3300006854 | Populus Rhizosphere | HTATRGLTGNEVRLMNDPASHQSAPHDPLAAIRGQFPGWECWRGVSGLLYVRRRMTSPPVVFRGYTAKSLADQIREHEARQR* |
| Ga0075425_1018652422 | 3300006854 | Populus Rhizosphere | MNDHSSHQHPAHQPSDPLAPLRGQFPRWEAWRGVSGLLYARLRRSSPPVVFRDVTGEGLARQIREWEARQR* |
| Ga0075425_1028343482 | 3300006854 | Populus Rhizosphere | DPLAPLRGQFPRWEAWRGIGGLLYARLRKSSPPVVFRDVTGEGLARQIREWEREHR* |
| Ga0075434_1006953091 | 3300006871 | Populus Rhizosphere | SSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKALAEQIREHEARQR* |
| Ga0075434_1011637301 | 3300006871 | Populus Rhizosphere | MNDHSSPQPAPHDPLAALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIRGYEARQR* |
| Ga0075424_1005899651 | 3300006904 | Populus Rhizosphere | MNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKALAEQIREHETRQR* |
| Ga0075424_1017266501 | 3300006904 | Populus Rhizosphere | SSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0079219_114098301 | 3300006954 | Agricultural Soil | MDDHSSPQRAPHDPMAAIRGYCPAWEAWRGVSGLLYVRRRMSSPPVVFRGYTAKSLAEQIREWEAGRR* |
| Ga0075435_1014930591 | 3300007076 | Populus Rhizosphere | MNDHSSPQPAPHDPLAALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQI |
| Ga0099791_105072322 | 3300007255 | Vadose Zone Soil | MNDHSSPQPAPHDPLAVLCGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSL |
| Ga0099828_100374832 | 3300009089 | Vadose Zone Soil | MSRAPAAALAPLIGKFPGWECWRGIAGLLYARRRKTSPPVVFRDVTGEGLARQIREWEREHR* |
| Ga0126379_105419721 | 3300010366 | Tropical Forest Soil | MQDPTDRPRDPLAELRALLAGGFTRWEAWRGVSGLVYARRRMSSPPVVFRGVTAQAVAEQISKYEEAR* |
| Ga0134128_123966191 | 3300010373 | Terrestrial Soil | HPSPQPAPHDPLAVLRGQFPGWECWRGVSGILYVRRRMSSPPVVFRDVTGEGLARQIREWERQRS* |
| Ga0136449_1016474781 | 3300010379 | Peatlands Soil | MSRAPAAELAPLIGKFPGWECWTGIAGLLYARRRRSSPPVVLRDVTGEGLTRQIRAWEEGNRAV* |
| Ga0126383_113290972 | 3300010398 | Tropical Forest Soil | MQDPTDRPPDPLAELRALLAGGFTRWEAWRGVSGLVYARRRMSSPPVVFRGVTAQAVAEQISKYEEAR* |
| Ga0134122_115883252 | 3300010400 | Terrestrial Soil | MNDHSSPQPAPHDALAVLRGQFPGWEAWRGVSGLLYVRRRMSSPPVVFRDVTGEGLARQIREWERQRS* |
| Ga0134123_135957291 | 3300010403 | Terrestrial Soil | VNDHSSPEPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0137365_104950722 | 3300012201 | Vadose Zone Soil | MNDPASHQPAPHDPLTALRGQFPGWEAWRGVSGLLYVRRRMSSPPVVFRGYTAKVLAKQIREHEARQQ* |
| Ga0137399_109005032 | 3300012203 | Vadose Zone Soil | MNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0137372_105981112 | 3300012350 | Vadose Zone Soil | MNDPASRQPAPHDPLAVLRGQFPGWEAWRGVSGLLYGRRRMSSPPVVFRGYTAKVLAKQIREHEARQQ* |
| Ga0137413_110742471 | 3300012924 | Vadose Zone Soil | MNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMPSPPVVFRGYTAKSLAEQIREYEGRQR* |
| Ga0137404_107791531 | 3300012929 | Vadose Zone Soil | MNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIRGYEARQR* |
| Ga0164300_101784383 | 3300012951 | Soil | MNDPASHQPAPHDPLAALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0164298_108873441 | 3300012955 | Soil | VNDHSSPPPAPHDPLAVLRGQFPGWAAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0164303_103373872 | 3300012957 | Soil | MHDDSSPQPAPPDPLAVLRGQFPGWEAWRGVSGLLYVQRRMTSPPVVFRGYTAKSLAEQIREHESRQQ* |
| Ga0164301_107623532 | 3300012960 | Soil | VNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRGMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0164309_105326801 | 3300012984 | Soil | VNDHPSPQPAPHDPLAALRGQFPGWEAWRGVSGLLYVRRGMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0164308_111361581 | 3300012985 | Soil | MNDPASQQPAPHDPLTALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLTEQIREHEARQR* |
| Ga0164305_107291531 | 3300012989 | Soil | MNDHSSPQPAPHDPLAALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSVAEQIREYEARQR* |
| Ga0164305_109466901 | 3300012989 | Soil | MHDDSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREWEAGRR* |
| Ga0137412_108573012 | 3300015242 | Vadose Zone Soil | MNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIRAHEARQR* |
| Ga0132256_1013010072 | 3300015372 | Arabidopsis Rhizosphere | MDDHSSRQRAPHDPMAAIRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR* |
| Ga0132257_1022646532 | 3300015373 | Arabidopsis Rhizosphere | MDDHSSHQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREWEAGRR* |
| Ga0066655_109723922 | 3300018431 | Grasslands Soil | MNDPASHQPASHDPLTALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAGQIREYEARQR |
| Ga0210399_107898222 | 3300020581 | Soil | MHDDSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRTTSPPVVFRGYTAKSLAEQIREYEARQR |
| Ga0210399_113137801 | 3300020581 | Soil | MHDDSSPPPAAHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR |
| Ga0210383_100236686 | 3300021407 | Soil | VEDPASHRHPAHQPPDPLAPLRGQFPGWEAWRGVGGLLYARRRRSTPPVVFRDVTGEGLARQIREWEQEHR |
| Ga0210384_106612172 | 3300021432 | Soil | VSRAPAAALAPLIGKFPGWECWQGIAGPLYARRRKSSPPVVFRDVTGEGLARQIREWEREHR |
| Ga0210402_102817612 | 3300021478 | Soil | VNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIRAHEARQR |
| Ga0210402_103749193 | 3300021478 | Soil | MNDPSHQHPAHQPPDPLAPLRGQFPGWEAWCGIGGLLYARRRRSSPPVVFRDVTGDGLARQIREHDGRQR |
| Ga0126371_103272702 | 3300021560 | Tropical Forest Soil | MNDPASRQPAPHDPLTVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKALAEQIREYEARRR |
| Ga0207685_100331891 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | VNDHPSPQPAPHDPLTAPRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHERRRR |
| Ga0207693_102522853 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDHPSPQPAPHDPLAALRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQI |
| Ga0207646_1000122217 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | VDNSIPPAPDDWPGALLGQFPGWETWRGVSGVLYVRRRKSSPPVVFRDTTVEGLIRQIREYQAGEPK |
| Ga0207687_111236132 | 3300025927 | Miscanthus Rhizosphere | MNDHSSPQPAPHDALAVLRGQFPGWEAWRGVSGLLYVRRRMSSPPVVFRGYTARSL |
| Ga0207700_119628631 | 3300025928 | Corn, Switchgrass And Miscanthus Rhizosphere | VNDHSSRQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIRAHEARQR |
| Ga0207664_100836711 | 3300025929 | Agricultural Soil | MNDHPSPQPAPHDPLAVLPGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQ |
| Ga0207665_100095795 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLVEQIREHEARQR |
| Ga0207677_116053481 | 3300026023 | Miscanthus Rhizosphere | MNDHPSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHEARQR |
| Ga0209073_101518541 | 3300027765 | Agricultural Soil | VNDHPSPQPAPHDPLAVLRGQFPGWETWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIRAHEARRQ |
| Ga0209166_100084593 | 3300027857 | Surface Soil | MSRAPAAALAPLIGKFPGWECWQSIAGLLYARRRKSSPPVVFRDVTAEGLARQIREWEGNRPV |
| Ga0307296_101600662 | 3300028819 | Soil | VNDHSSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMASPPVVFRGYTAKSLAEQIREYEARQR |
| Ga0307469_118188731 | 3300031720 | Hardwood Forest Soil | MDDHPSPQPAPHDPLAVLRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKALAEQIREHERRRR |
| Ga0307468_1013786521 | 3300031740 | Hardwood Forest Soil | MNDHPSPQPAPHDPLAAIRGQFPGWEAWRGVSGLLYVRRRMTSPPVVFRGYTAKSLAEQIREHETRQR |
| Ga0307473_106987202 | 3300031820 | Hardwood Forest Soil | MHDDSSPQPAPHDPLAVLRGQFPGWECWRGVSGILYVRRRMSSPPVVFRDVTGEGLARQIREWERQRS |
| Ga0335085_100780759 | 3300032770 | Soil | MSNPTDQPAAADPLAALRALLLGQFPQWEAWRGISGLLYTRRRTTSPPVVFRGVTAEAVAEQIREHEEHRS |
| Ga0335081_120744151 | 3300032892 | Soil | MSNPTDQPAAADPLVALRALLLGQFPQWEAWRGISGMLYARRRMTSPPVVFRGVTAEAVAEQIREHEEHRS |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |