Metagenome Family F098152

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098152
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	102 residues
Representative Sequence	MAANDLVIPPPTPKIMDYPASIGLIIAVVLVTILLVVTSRFDATGGTLTISLLVVLSFLGLVTFCAFFTVPTDEITSGAIGGLVAAFGAVVAYWLGRRKEPP
Number of Associated Samples	45
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.38 %
% of genes near scaffold ends (potentially truncated)	20.19 %
% of genes from short scaffolds (< 2000 bps)	49.04 %
Associated GOLD sequencing projects	38
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.923 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (73.077 % of family members)
Environment Ontology (ENVO)	Unclassified (62.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (88.462 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.62% β-sheet: 0.00% Coil/Unstructured: 45.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF11752	DUF3309	30.77
PF11860	Muramidase	23.08
PF07484	Collar	4.81
PF03237	Terminase_6N	2.88
PF07589	PEP-CTERM	2.88
PF00182	Glyco_hydro_19	2.88
PF08291	Peptidase_M15_3	0.96
PF00589	Phage_integrase	0.96
PF07486	Hydrolase_2	0.96
PF01391	Collagen	0.96
PF13884	Peptidase_S74	0.96
PF02878	PGM_PMM_I	0.96
PF06048	DUF927	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	2.88
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	2.88
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.96
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.96
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	0.96
COG5519	Predicted ATPase domain of Cch-like helicases, DUF927 family	General function prediction only [R]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.54 %
Unclassified	root	N/A	38.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.92 %
Unclassified	root	N/A	38.46 %
Viruses	superkingdom	All Organisms → Viruses	9.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.92 %
Unclassified	root	N/A	38.46 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.19 %
Unclassified	root	N/A	38.46 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.77 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.92 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.23 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.77 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.92 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.96 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.23 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	5.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	1.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.92 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.96 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.23 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	4.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %
Ochrobactrum phage vB_OspP_OH	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ochrobactrum phage vB_OspP_OH	1.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.92 %
Acidisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	0.96 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.96 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.23 %
Roseomonas rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas rhizosphaerae	4.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %
Ochrobactrum phage vB_OspP_OH	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ochrobactrum phage vB_OspP_OH	1.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.92 %
Acidisoma cellulosilyticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	0.96 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.96 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101388575	Not Available	595	Open in IMG/M
3300005437\|Ga0070710_10123370	Not Available	1571	Open in IMG/M
3300005437\|Ga0070710_11163443	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300005439\|Ga0070711_100148431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1766	Open in IMG/M
3300005542\|Ga0070732_10016295	All Organisms → cellular organisms → Bacteria → Proteobacteria	4153	Open in IMG/M
3300005602\|Ga0070762_10029775	All Organisms → cellular organisms → Bacteria → Proteobacteria	2911	Open in IMG/M
3300005610\|Ga0070763_10155280	All Organisms → cellular organisms → Bacteria → Proteobacteria	1197	Open in IMG/M
3300005712\|Ga0070764_10008468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4954	Open in IMG/M
3300006163\|Ga0070715_10067692	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1586	Open in IMG/M
3300006173\|Ga0070716_100333620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas rhizosphaerae	1067	Open in IMG/M
3300006175\|Ga0070712_100402615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas rhizosphaerae	1131	Open in IMG/M
3300006176\|Ga0070765_100040364	All Organisms → cellular organisms → Bacteria → Proteobacteria	3731	Open in IMG/M
3300006176\|Ga0070765_100144810	Not Available	2113	Open in IMG/M
3300012685\|Ga0137397_10000892	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	20644	Open in IMG/M
3300020579\|Ga0210407_10137298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1879	Open in IMG/M
3300020580\|Ga0210403_10000408	Not Available	45667	Open in IMG/M
3300020580\|Ga0210403_10237230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1497	Open in IMG/M
3300020580\|Ga0210403_10286729	Not Available	1349	Open in IMG/M
3300020580\|Ga0210403_10633639	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300020581\|Ga0210399_10109314	All Organisms → cellular organisms → Bacteria → Proteobacteria	2266	Open in IMG/M
3300020582\|Ga0210395_10007445	All Organisms → cellular organisms → Bacteria → Proteobacteria	8289	Open in IMG/M
3300020582\|Ga0210395_10026633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4244	Open in IMG/M
3300020582\|Ga0210395_10037668	All Organisms → cellular organisms → Bacteria → Proteobacteria	3545	Open in IMG/M
3300020582\|Ga0210395_10999006	Not Available	620	Open in IMG/M
3300020583\|Ga0210401_10050003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ochrobactrum phage vB_OspP_OH	3948	Open in IMG/M
3300020583\|Ga0210401_10123745	All Organisms → cellular organisms → Bacteria → Proteobacteria	2425	Open in IMG/M
3300021088\|Ga0210404_10678524	Not Available	587	Open in IMG/M
3300021168\|Ga0210406_10018511	Not Available	6547	Open in IMG/M
3300021168\|Ga0210406_10030997	Not Available	4835	Open in IMG/M
3300021168\|Ga0210406_10169092	Not Available	1827	Open in IMG/M
3300021168\|Ga0210406_10604451	Not Available	856	Open in IMG/M
3300021171\|Ga0210405_10002861	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	17511	Open in IMG/M
3300021180\|Ga0210396_10071300	Not Available	3162	Open in IMG/M
3300021180\|Ga0210396_10179062	All Organisms → Viruses → Predicted Viral	1899	Open in IMG/M
3300021180\|Ga0210396_10946518	Not Available	732	Open in IMG/M
3300021180\|Ga0210396_11440152	Not Available	568	Open in IMG/M
3300021181\|Ga0210388_10007311	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Ochrobactrum phage vB_OspP_OH	8723	Open in IMG/M
3300021181\|Ga0210388_10010488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7360	Open in IMG/M
3300021181\|Ga0210388_10049187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3510	Open in IMG/M
3300021181\|Ga0210388_10049439	All Organisms → Viruses → Predicted Viral	3502	Open in IMG/M
3300021181\|Ga0210388_10081392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2748	Open in IMG/M
3300021181\|Ga0210388_10108750	Not Available	2380	Open in IMG/M
3300021181\|Ga0210388_10204899	Not Available	1726	Open in IMG/M
3300021181\|Ga0210388_10323016	Not Available	1357	Open in IMG/M
3300021181\|Ga0210388_10580491	Not Available	981	Open in IMG/M
3300021181\|Ga0210388_10747027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	850	Open in IMG/M
3300021181\|Ga0210388_11290907	Not Available	616	Open in IMG/M
3300021401\|Ga0210393_10102622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2278	Open in IMG/M
3300021403\|Ga0210397_10002097	Not Available	12651	Open in IMG/M
3300021403\|Ga0210397_10012271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5175	Open in IMG/M
3300021403\|Ga0210397_10013302	All Organisms → Viruses → Predicted Viral	4979	Open in IMG/M
3300021403\|Ga0210397_10026983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3563	Open in IMG/M
3300021403\|Ga0210397_10047377	Not Available	2744	Open in IMG/M
3300021403\|Ga0210397_10171912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1530	Open in IMG/M
3300021404\|Ga0210389_10004692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10601	Open in IMG/M
3300021404\|Ga0210389_10060538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2902	Open in IMG/M
3300021404\|Ga0210389_10622473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	848	Open in IMG/M
3300021404\|Ga0210389_10973512	Not Available	659	Open in IMG/M
3300021404\|Ga0210389_11012532	Not Available	644	Open in IMG/M
3300021405\|Ga0210387_10000191	Not Available	44948	Open in IMG/M
3300021405\|Ga0210387_10000200	Not Available	44140	Open in IMG/M
3300021405\|Ga0210387_10000399	Not Available	30854	Open in IMG/M
3300021405\|Ga0210387_10019116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5328	Open in IMG/M
3300021405\|Ga0210387_10021108	All Organisms → cellular organisms → Bacteria → Proteobacteria	5072	Open in IMG/M
3300021405\|Ga0210387_10035704	Not Available	3942	Open in IMG/M
3300021405\|Ga0210387_10113143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2284	Open in IMG/M
3300021405\|Ga0210387_10646054	Not Available	939	Open in IMG/M
3300021405\|Ga0210387_10818439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	822	Open in IMG/M
3300021405\|Ga0210387_10869192	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300021405\|Ga0210387_11096703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300021405\|Ga0210387_11236219	Not Available	647	Open in IMG/M
3300021406\|Ga0210386_10148657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1958	Open in IMG/M
3300021407\|Ga0210383_10408378	All Organisms → cellular organisms → Bacteria → Proteobacteria	1172	Open in IMG/M
3300021474\|Ga0210390_10394641	All Organisms → Viruses → Predicted Viral	1170	Open in IMG/M
3300021475\|Ga0210392_10000171	Not Available	52042	Open in IMG/M
3300021475\|Ga0210392_10000183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	49251	Open in IMG/M
3300021475\|Ga0210392_10007993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5537	Open in IMG/M
3300021475\|Ga0210392_10019540	All Organisms → cellular organisms → Bacteria → Proteobacteria	3816	Open in IMG/M
3300021475\|Ga0210392_10034532	All Organisms → cellular organisms → Bacteria	3006	Open in IMG/M
3300021475\|Ga0210392_10224432	Not Available	1321	Open in IMG/M
3300021475\|Ga0210392_10313320	Not Available	1127	Open in IMG/M
3300021477\|Ga0210398_10240077	Not Available	1476	Open in IMG/M
3300021477\|Ga0210398_10292773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1328	Open in IMG/M
3300021478\|Ga0210402_10009131	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	8620	Open in IMG/M
3300021478\|Ga0210402_10089311	Not Available	2753	Open in IMG/M
3300021478\|Ga0210402_10100444	Not Available	2597	Open in IMG/M
3300021478\|Ga0210402_10177405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1951	Open in IMG/M
3300021479\|Ga0210410_10001542	Not Available	21498	Open in IMG/M
3300021479\|Ga0210410_10014316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6835	Open in IMG/M
3300025898\|Ga0207692_11167928	Not Available	511	Open in IMG/M
3300025905\|Ga0207685_10104210	Not Available	1218	Open in IMG/M
3300025915\|Ga0207693_11334377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas rhizosphaerae	535	Open in IMG/M
3300025939\|Ga0207665_10415555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas rhizosphaerae	1027	Open in IMG/M
3300027165\|Ga0208608_100158	All Organisms → cellular organisms → Bacteria	2095	Open in IMG/M
3300027842\|Ga0209580_10021180	All Organisms → cellular organisms → Bacteria → Proteobacteria	2894	Open in IMG/M
3300027855\|Ga0209693_10029954	All Organisms → cellular organisms → Bacteria	2649	Open in IMG/M
3300027895\|Ga0209624_10199838	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300027895\|Ga0209624_10207671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum	1301	Open in IMG/M
3300027908\|Ga0209006_10074438	Not Available	3025	Open in IMG/M
3300027908\|Ga0209006_10310050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1345	Open in IMG/M
3300028146\|Ga0247682_1003894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas rhizosphaerae	2633	Open in IMG/M
3300028906\|Ga0308309_10242155	Not Available	1505	Open in IMG/M
3300028906\|Ga0308309_11044015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	707	Open in IMG/M
3300032205\|Ga0307472_100333741	All Organisms → Viruses → Predicted Viral	1236	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.92%
Loam	Environmental → Terrestrial → Soil → Loam	23.08%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	74.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	73.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.62%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027165	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF035 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1013885752	3300002245	Forest Soil	MADPLIVTPNPLPKLMDYPASIGIVIVVVLTSILLFVAGKFDPSGGTLTISILVVLAFLSLVTYCALFTIPTDEITSGAIGGLVAGFGAVVAYWLGRDRRPPP*
Ga0070710_101233704	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RALEGAGMMAASDLNPPPIPKLMDYPASIGVSIAVILTTVLLIVVSKFDTTGGVLTISLLVVLAFLGLVTFCAFFTIPADEITSSAIGGLTAAFGAIIAYWLGVKKKDPP*
Ga0070710_111634431	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MADIVVTPNPLPKLMDFPASIGLAIVVALTTILLVVASRFDATGGTLTISLLVVLSFLALVTFCALFTIPTDEITSGAIGGLVAGFGAVVAHWL
Ga0070711_1001484312	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAASDLNPPPIPKLLDYPASIGVALVVALTALLLFLAGRFDPTGGVLTISLMVVLAFLGLVVFCAFFTVPTDEITSSVIGGLTASFGAIIAYWLGVKKKDPP*
Ga0070732_100162953	3300005542	Surface Soil	MAANDLVVPPPVPRVLDYPASIGVIIAVVLTAALLIVAGKWDATGGTLTISLLVILSFLGLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAYWLSQGRNKP*
Ga0070762_100297754	3300005602	Soil	MADVVNPPPSPKVMDYPASVGLMIAVVLVTILLVVTSRFDPTGGTLTISLLVVLGFLGLVTFCAFFTVPTDEITSGAIGGLVAAFGAVVAYWLSRNRKDGPP*
Ga0070763_101552803	3300005610	Soil	MAASDLVIPPPSPRIMDYPASIGLVIAVVLTVVLVIAASKFDKTGGTLTVSLLVILAFLGLVTFCALFTIPTDEITSGAIGGLVAAFGAVVAYWLSRGRPPE*
Ga0070764_100084689	3300005712	Soil	MADPLIVPPPIPKLLDYPASIGVALVVAFTTVLLVVVSKFDQTGGVLTLSLLVVLAFLGLITFCAFFTIPTDEITSSAIGGLTAAFGAIIAYWLGKNRNQP*
Ga0070715_100676925	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MAAPDFVNPSPIPKLTDYPASIGIALVVVFTTALLFVTGRFDATGGVLTISLLVVLAFLGLVTFCAFFPVPNDEVTSSVIGGLTAAFGAVVVHWLGRNKKDPP*
Ga0070716_1003336202	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MAAPDLVNPPPIPKLTDYPASIGIALVVVFTTALLFVAGRFDATGGVLTISLLVVLAFLGLVTFCAFFPVPNDEVTSSVIGGLTAAFGAVVVFWLGRRKDPP*
Ga0070712_1004026151	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MADIVVTPNPLPKLMDFPASIGLAIVVALTTILLVVASRFDATGGTLTISLLVVLSFLALVTFCALFTIPTDEITSGAIGGLVAGFGAVVAHWLGRRKDPP*
Ga0070765_1000403643	3300006176	Soil	MAASDLVVPPPTPRIFDYPASIGLVIAAVLTVFLVIAASKFDKTGGTLTISLLVILAFLGLVTFCALFTIPTDEITSGAIGGLVAAFGAVVAYWLSRGRPPE*
Ga0070765_1001448104	3300006176	Soil	MADTVVTPNPLPKLLDYPASIGLAIAVVLTTVLLVVASRFDATGGTLTISLLVVLSFVGLVIFCSLFTIPTDEITSGAIGGLVAAFGAVVAYWLGRGNRKEPP*
Ga0137397_1000089215	3300012685	Vadose Zone Soil	MAASDLIIPPPTPKIMDYPASIGLIIAVVLVTCLLVVTSKFDSTGGTLTISLLVVLSFLGLVTFCAFFTIPTDEITSGAIGGLVAAFGAVVAYWLGRSKEPPK*
Ga0210407_101372983	3300020579	Soil	MAASDLVIPPPSPRIFDYPASIGLVIAAVLTVFLVIAASKFDKTGGTLTISLLVILAFLGLVTFCALFTIPTDEITSGAIGGLVAAFGAVVAYWLSRGRPPE
Ga0210403_1000040857	3300020580	Soil	VADNNLVIPPPTPKLLDYPASMGLSIAVVLTIVLVIVANRFDKTGGTLTVSILVILAFISLVTFCVYFTVPTDEITSGAIGGLVAAFGAVVAYWLSRTPRGPPE
Ga0210403_102372303	3300020580	Soil	MADNGLLIPPPTPKLMDYPASIGIVIAVALTAVLLIVSGKFDPTGGTLTISLLVILAFLGLVTFCAFFTIPTDEITSGAIGGLVAAFGAVVAYWLGQHKKGPPNG
Ga0210403_102867291	3300020580	Soil	MADPLIVTPNPLPRLLDYPASIGLAIAVVLTTVLLVVASKFDPTGGTLTISLLVILAFIGLVTFCALFTVPTDEITSGAIGGLVAAFGAVVAYWLGRGNRKEPP
Ga0210403_106336391	3300020580	Soil	QLVVTPNPLPRLLDYPASIGLAIAVVLTTVLLVIASRFDPTGGTLTISLLVVLSFVGLVIFCSLFTIPTDEITSGAIGGLVAAFGAVVAYWLGRNKEPPK
Ga0210399_101093143	3300020581	Soil	MEGERLMADVVNPPPIPKLLDYPASAGLAIAVVLTTILLVVTSKFDMTGGVLTISLLVILAFLGLVTFCAFFTVPTDEITSGAIGALIAAFAAVVTYWLSRNKEPPQ
Ga0210395_1000744510	3300020582	Soil	MADANFVNPPPTPKLMDYPASIGLVIAVILTTVLVVVASKFDITGGTLTISLLVILSFLGLVTFCAFFTIPTDEITSGAIGGLVAAFGAVVAYWLGQNKKGPPNG
Ga0210395_100266334	3300020582	Soil	MAASDLVVPPPTPRIFDYPASIGLVIAAVLTVFLVIAASKFDKTGGTLTISLLVILAFLGLVTFCALFTIPTDEITSGAIGGLVAAFGAVVAYWLSRGRPPE
Ga0210395_100376686	3300020582	Soil	MVLAELVIPPPSPKLLDYPASVGLVIAAVLTMFILWVANKFDRTGGTLTISLLVILSFLSLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVTYWLGRNWKGPPE
Ga0210395_109990061	3300020582	Soil	MADPLIVPPPIPKLLDYPASIGVALVVAFTTVLLVVVSKFDQTGGVLTLSLLVVLAFLGLITFCAFFTIPTDEITSSAIGGLTAAFGAIIAYWLGVNKKGPPS
Ga0210401_100500032	3300020583	Soil	MADFVNPPPVPKLLDYPASLGLAIAVFLTTILLVVTSRFDATGGTLTISLLVVLGFLGLVTFCALFTVPTDEITSGAIGGLVAAFGAVVAYWLSRNRKDGPP
Ga0210401_101237453	3300020583	Soil	MADVVVTPNPLPKLMDYPASIGLAVVVMLTTILLVVVSKFDASGGTLTISLLVVLAFLALVTFCALFTIPTDEITSGAIGGLVAGFGAVVAHWLGRWKEPPR
Ga0210404_106785242	3300021088	Soil	MADPLIVPPPIPKLLDYPASIGVALVVAFTTVLLVVVSKFDQTGGVLTLSLLVVLAFLGLITFCAFFTIPTDEITSSAIGGLTAAFGAIIAYWLGKNRNQP
Ga0210406_100185115	3300021168	Soil	MAASDLVIPPPTPRIMDYPASIGLVIAVVLTVVLVIAASKFDKTGGTLTVSLLVILAFLGLVTFCALFTIPTDEITSGAIGGLVAAFGAVVAYWLSRGRPPE
Ga0210406_100309978	3300021168	Soil	MADVVVTPNPLPKLMDYPASIGLAIAVVLTTVLLVVASRFDPTGGTLTISLLVVLSFVGLVIFCALFTIPTDEITSGAIGGLVAAFGAVVAYWLGRGNRKEPP
Ga0210406_101690922	3300021168	Soil	MADPLVVTPNPLPKLMDYPASLGLMIVVLLTTILLVVASKFDATGGTLTISLLVVLSFLALVTFCALFTIPTDEITSGAIGGLVAGFGAIVAHWLGRRKEPP
Ga0210406_106044513	3300021168	Soil	MADVVNPPPSPKVMDYPASVGLMIAVVLVTILLVVTSRFDPTGGTLTISLLVVLGFLGLVTFCAFFTVPTDEITSGAIGGLVAAFGAVVAYWLSRNRKDGPP
Ga0210405_100028619	3300021171	Soil	MAANDLVVPPPTPKLLDYPASMGLSIAVVLTIILVFVAGRYDPTGGTLTISILVILAFISLVTFCVYFTVPTDEITSGAIGGLVAAFGAVVAYWLSRGKP
Ga0210396_100713005	3300021180	Soil	MNAPPIPKILDYPAALGLVIAVALTAVLLVVCKHFDPTGGSLTISLLVILAFLSLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLYRDPRK
Ga0210396_101790622	3300021180	Soil	MAANDLIIPPPTPKLLDYPASIGLVIAVVLTATTLIVANKFDKTGGTLTVSLLVILSFLSLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAYWLGRGNGPRN
Ga0210396_109465182	3300021180	Soil	MADFVNPPPVPKLLDYPASLGLAIAVFLTTILLVVTSRFDATGGTLTISLLVVLGFLGLVTFCALFTVPTDEITSGAIGGLVAAFGAVVAYWLSRNR
Ga0210396_114401522	3300021180	Soil	MVLAQLVIPPPVPKILDYPASIGVILAVLMTAVMLIVSGKFDRTGGTLTISLLVILSFLGLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLNRNVRGPPE
Ga0210388_100073119	3300021181	Soil	MAASDLVIPPPSPKLLDYPASVGLAIAVALTIILIIVANKFDKTGGTLTISLLVILAFLGLVTFCALFTIPTDEITSGAIGGLVAAFGAVVAFWLSRTPPRPPE
Ga0210388_100104885	3300021181	Soil	MADNGLIIPPPTPKLMDYPASIGIVIAVALTAVLLIVSGKFDPTGGTLTISLLVILAFLGLVTFCAFFTIPTDEITSGAIGGLVAAFGAVVAYWLGQHKKGPPNG
Ga0210388_100491872	3300021181	Soil	MADASFVNPPPTPKLMDYPASIGLVIAVVLTTILVIVASKFDITGGTLTVSLLVILSFLGLVTFCAFFTIPTDEITSGAIGGLVAAFGAVVAYWLGQNKKGPPNG
Ga0210388_100494395	3300021181	Soil	MASPDFIQPPPVPKLLDYPASIGLAIAVALTIILVIISDKFDKTGGTLTISLLVILAFLSLVTFCAYFTIPTDEITSGAIGGLVAAFGAVVAYWLSRGRDGGPRD
Ga0210388_100813924	3300021181	Soil	MIAAAAELVQPPPIPKIMDYPASVGLIIAVVLVTMLLVVTSRFDPTGGTLTISLLVVLGFMSLVTFCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLSRDKRPPPP
Ga0210388_101087507	3300021181	Soil	PPIPKLLDYPASIGVALVVAFTTVLLVVVSKFDQTGGVLTLSLLVVLAFLGLITFCAFFTIPTDEITSSAIGGLTAAFGAIIAYWLGKNRNQP
Ga0210388_102048994	3300021181	Soil	MMALAAEAVQLPPVPKIMDYPASIGLIIAVVLVTCLLVVTSKFDASGGTLTVSLLVVLGFMSLVTFCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLSRNNRKDPP
Ga0210388_103230162	3300021181	Soil	MAANDLVIPPPTPKLMDYPASVGVIIAVVLTTVMVIVASKFDHTGGTLTVSLLVILSFLGLVTFCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLNRSNGRGPPP
Ga0210388_105804913	3300021181	Soil	MAANELVIPPPTPKLLDYPASVGLVIAVALTAILLIVSGRFDHTGGTLTVSLLVILSFLGLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLGGGRRKDPP
Ga0210388_107470272	3300021181	Soil	MVLAELVIPPPSPKLLDYPASVGLVIAAVLTMFILWVANKFDRTGGTLTISLLVILSFLSLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVTYWLGRNW
Ga0210388_112909071	3300021181	Soil	MAANDLVIPPPSPKILDYPASIGLVIAVGLTTITLVVANKFDATGGTLTVSLLVVFGFLGLVTYCAFFTIPTDEITSGAIGGLVAQFGAVVVYWLSR
Ga0210393_101026224	3300021401	Soil	VNAPPIPKILDYPAALGLVIAVALTAVLLIVCKHFDPTGGSLTISLLVILAFLSLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLYRDPRK
Ga0210397_100020978	3300021403	Soil	MAANDLVVPPPTPRIMDYPASIGLAIAVALTIILVIVASKFDRTGGTLTISLLVILAFLGLVTFCALFTIPTDEITSGAIGGLVAAFGAVVAFWLSRTPPRPPE
Ga0210397_1001227111	3300021403	Soil	PNLLDYPASIGLVIAVVLTATTLIVANKFDKTGGTLTVSLLVILSFLSLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAYWLGRGNGPRN
Ga0210397_100133021	3300021403	Soil	MAANDLIIPPPTPKLLDYPASIGLVIAVVLTATTLIVANKFDKTGGTLTVSLLVILSFLSLVTYCAFFTIPTDEITSGAIGGLVAAFGAVV
Ga0210397_100269834	3300021403	Soil	MAASDLVVPPPTPKILDYPASIGVVIAVVLTTILVVIVSKFDATGGTLTISLLVILSFLGLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLSRRGPNE
Ga0210397_100473775	3300021403	Soil	MAEPLVVPPPVPKLMDYPASIGVSIAVILTTALLIVVSKFDATGGVLTISLLVVLAFLGLVTFCAFFTIPADEITSSAIGGLTAAFGAIIAYWLGVNKKGPPS
Ga0210397_101719122	3300021403	Soil	MNAAFAAATDLVVPPPTPKLMDYPASIGVAIAVALTTILLVVVSRFDATGGVLTISLLVVLAFLGLVTFCAFFTIPADEITSSAIGGLTAAFGAIIAYWLGKNRQDKP
Ga0210389_100046926	3300021404	Soil	MVFAELVIPPPSPKLLDYPASVGLVIAAVLTMFILWVANKFDRTGGTLTISLLVILSFLSLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVTYWLGRNWKGPPE
Ga0210389_100605383	3300021404	Soil	VNAPPIPKILDYPAALGLVIAVALTAVLLVVCKHFDPTGGSLTISLLVILAFLSLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLYRDPRK
Ga0210389_106224731	3300021404	Soil	MNAAFAAATDLVVPPPTPKLMDYPASIGVAIAVALTTILLVVVSRFDATGGVLTISLLVVLAFLGLVTFCAFFTIPADEITSSAIAGLTAA
Ga0210389_109735121	3300021404	Soil	MATSPSDLVIPPPSPKLLDYPASLGLMVAVVLTSILLVVISRFDATGGTLTISLLVVLAFLGLVTFCAFFSIPSDEITSGAIGGLVAAFGAVVA
Ga0210389_110125323	3300021404	Soil	MAASDLVVPPPTPKLLDYPASLGLAIAVALTTILLVVASRFDATGGTLTVSLLVILAFLGLVTFCAFFTVPTDEITSGAIGGLVAAFGAVVAYWLSRGRDKS
Ga0210387_1000019170	3300021405	Soil	MAASDVPQYAPIPKLLDYPASLGLGIAVVLTSMLLVVVSRFDATGGTLTISLLVIMAFLGLVTFCAFFTVPTDEITSGAIGGLVAAFGAVVAYWLGRNKKDREP
Ga0210387_100002004	3300021405	Soil	MMAAAADFVQPPPVPKIMDYPASIGLIIAVVLVTVLLVVVNRFDASGGTLTISLLIVLAFISLVTFCAFFTIPNDEITAGAIGGLVAAFGAVVAYWLSRGPANRKGPPDAP
Ga0210387_1000039931	3300021405	Soil	MADNLVVTPNPLPKLMDYPASIGIGIAVALVTILLIVINRFDMTGGALTISLLVVLGFLGLVIFCALFTIPNDEITSSVIGGLTASFGAVIAFWLGRNMKGPPQ
Ga0210387_100191164	3300021405	Soil	MESERLISMAASDLVVPPPTPKLLDYPASLGLAIAVALTTILLVVASRFDATGGTLTVSLLVILAFLGLVTFCAFFTVPTDEITSGAIGGLVAAFGAVVAYWLSRGRDKS
Ga0210387_100211087	3300021405	Soil	MAASDLIVPPPTPKLMDYPASLGLAIAVALTTILLVVASRFDATGGTLTVSLLVILAFLGLVTFCAFFTVPTDEITSGAIGGLVAAFGAVVAYWLSRGRDKP
Ga0210387_100357042	3300021405	Soil	MADQLVVTPNPLPRLLDYPASIGLAIAVILTTVLLVVASRFDPTGGTLTISLLVVLAFIGLVTFCALFTVPTDEITSGAIGGLVAAFGAVVAYWLGRGNRKEPP
Ga0210387_101131434	3300021405	Soil	MASNDLVIPPPTPKLMDYPASIGVIIAVVLTTFMVIVASKFDHTGGTLTISLLVILSFLGLVTFCAFFTIPTDEITSGAIGGLVAAFGAVVAYWLGQNRKDRE
Ga0210387_106460543	3300021405	Soil	MAANDLVIPPPTPKLIDYPASVGVIIAVVLTTVMVVVASKFDHTGGTLTISLLVILSFLGLVTFCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLNRSNGRGPPP
Ga0210387_108184391	3300021405	Soil	MVLAELVIPPPSPKLLDYPASVGLVIAAVLTMFILWVANKFDRTGGTLTISLLVILSFLSLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVTYWLGRNWREPPHE
Ga0210387_108691922	3300021405	Soil	MADNGLVIPPPTPKLMDYPASIGLAIAVVLTAMLLIVVSKFDHTGGTLTISLLVILAFLGLVTFCALFTVPTDEITSGAIGGLVAAFGAVVAYWLGQSKKGPPNG
Ga0210387_110967032	3300021405	Soil	MIELAANEVVQLPPVPKIMDYPASIGLIIAVVLVTCLLVVTSKFDASGGTLTISLLVVLGFMSLVTFCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLSRNRKDPPS
Ga0210387_112362191	3300021405	Soil	RLRPEDGQCLRALESEGLMADQLVVTPNPLPRLLDYPASIGLAIAVVLTTVLLVIASRFDPTGGTLTISLLVVLSFVGLVIFCSLFTIPTDEITSGAIGGLVAAFGAVVAYWLGRGNRKEPP
Ga0210386_101486575	3300021406	Soil	MNAPPIPKILDYPAALGLVIAVALTAVLLVVCKQFDPTGGSLTISLLVILAFLSLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLYRDPRK
Ga0210383_104083782	3300021407	Soil	MADQLVVTPNPLPRLLDYPASIGLAIAVVLTTVLLVIASRFDPTGGTLTISLLVVLSFVGLVIFCSLFTIPTDEITSGAIGGLVAGFGAVVAHWLGRWKEPPR
Ga0210390_103946412	3300021474	Soil	MADPLIVPPPIPKLLDYPASIGVALVVAFTTVLLVVVSKFDQTGGVLTLSLLVVLAFLGLITFCAFFTIPTDEITSSAIGGLTAAFGAIIAYWLGVNKKGPPT
Ga0210392_1000017129	3300021475	Soil	MEGEGLMADPLVVTPNPLPKLMDYPASLGLMIVVLLTTILLVVASKFDATGGTLTISLLVVLSFLALVTFCALFTIPTDEITSGAIGGLVAGFGAIVAHWLGRRKEPP
Ga0210392_1000018352	3300021475	Soil	MAANDLVIPPPTPKLLDYPASIGLLIAVVLTAILLIVSSRFDPTGGTLTVSLLVILSFLSLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLGRGREPKE
Ga0210392_100079935	3300021475	Soil	MEGEEVMADPLVVTPNPLPKLMDYPASLGLMVVVLLASILLVVTSKFDATGGTLTISLLVVLAFLALVTFCALFTIPTDEITSGAIGGLVAAFGAVTAYWLGRNKKDREP
Ga0210392_100195402	3300021475	Soil	MADAVVTPNPLPKLLDYPASIGLAIAVVLTTVLLVVASRFDPTGGTLTISLLVVLSFVGLVIFCSLFTIPTDEITSGAIGGLVAAFGAVVAYWLGRGNREPPK
Ga0210392_100345325	3300021475	Soil	MAANDLVVPPPTPKLLDYPASIGLVIAVVLTAILLIVSGRFDHTGGTLTVSLLVILSFLGLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAFWLGGGRRKDPP
Ga0210392_102244323	3300021475	Soil	MATSPSDLVIPPPSPKLLDYPASLGLMVAVVLTSILLVVISRFDATGGTLTISLLVVLAFLGLVTFCAFFSIPSDEITSGAIGGLVAAFGAVVAFWLGKAGGKGPPQ
Ga0210392_103133203	3300021475	Soil	MPSPDLVVTPNPLPRLLDYPASIGLAIAVVLTTVLLVAASRFDPTGGSLTISLLVVLGFIGLVIFCALYTIPTDEITSGAIGGLVAAFGAVVAFWLGRGREPPK
Ga0210398_102400774	3300021477	Soil	PPVPKIMDYPASIGLIIAVVLVTVLLVVVNRFDASGGTLTISLLIVLAFISLVTFCAFFTIPNDEITAGAIGGLVAAFGAVVAYWLSRGPANRKGPPDAP
Ga0210398_102927733	3300021477	Soil	MASPDLIVTPNPLPKLLDFPASIGLAIVVGLTTILLFVASRFDPTGGSLTISLLVVLGFLGLVVFCALFTIPSDEITSGAIGGLVAAFGAVVAFWLGRGREPPK
Ga0210402_100091314	3300021478	Soil	MAANDLVIPPPTPKIMDYPASIGLIIAVVLVTILLVVTSRFDATGGTLTISLLVVLSFLGLVTFCAFFTVPTDEITSGAIGGLVAAFGAVVAYWLGRRKEPP
Ga0210402_100893114	3300021478	Soil	MAEVAVTPNPLPKLLDYPASIGLVIAVVLTTVLLVVASRFDATGGTLTISLLVVLGFLGLVIFCSLFTIPTDEITSGAIGGLVAGFGAVVAYWLGRGKDKQ
Ga0210402_101004445	3300021478	Soil	MADNLVVTPNPLPKLMDYPAFIGIGIAVALVTILLIVINRFDMTGGALTISLLVVLGFLGLVIFCALFTIPNDEITSSVIGGLTASFGAVIAFWLGRNMKGPPQ
Ga0210402_101774054	3300021478	Soil	MADPLIVTPNPLPRLLDYPASIGLAIAVVLTTVLLVVASKFDPTGGTLTISLLVILAFIGLVTFCALFTVPTDEITSGAIGGLVAAFGAVVAYWLGRGNRKDPPQ
Ga0210410_100015428	3300021479	Soil	MAASDLVIPPPTPRIMDYPASIGLVIAVVLTVVLVIAASKFDKTGGTLTISLLVILAFLGLVTFCALFTIPTDEITSGAIGGLVAAFGAVVAYWLSRGRPPE
Ga0210410_100143165	3300021479	Soil	VAASDYVNLPPTPKLLDYPASLGLAIAVVLTAILLVIVSKFDATGGVLTISLLVILAFLGLVTFCALFTVPTDEITSGAIGGLVAAFGAVVAYWLGRGPKNKE
Ga0207692_111679281	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	SLRALEGAGMMAASDLNPPPIPKLMDYPASIGVSIAVILTTVLLIVVSKFDTTGGVLTISLLVVLAFLGLVTFCAFFTIPADEITSSAIGGLTAAFGAIIAYWLGVKKKDPP
Ga0207685_101042101	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LVNPPPIPKLTDYPASIGIALVVVFTTALLFVAGRFDATGGVLTISLLVVLAFLGLVTFCAFFPVPNDEVTSSVIGGLTAAFGAVVVHWLGRNKKDPP
Ga0207693_113343771	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MMAASDLNPPPIPKLMDYPASIGVSIAVILTTVLLIVVSKFDTTGGVLTISLLVVLAFLGLVTFCAFFTIPADEITSSAIGGLTAA
Ga0207665_104155552	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MAAPDLVNPPPIPKLTDYPASIGIALVVVFTTALLFVAGRFDATGGVLTISLLVVLAFLGLVTFCAFFPVPNDEVTSSVIGGLTAAFGAVVVFWLGRRKDPP
Ga0208608_1001583	3300027165	Forest Soil	MIFAELVIPPPTPKLLDYPASIGIIIACILTAMMLVVAGRFDKTGGTLTISLLVILAFISLVTYCAFFTVPTDEITSGAIGGLVAAFGAVVTYWLGRNWKGPPE
Ga0209580_100211802	3300027842	Surface Soil	MAANDLVVPPPMPRVLDYPASIGVIIAVVLTAALLIVAGKWDATGGTLTISLLVILSFLGLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAYWLSQGRNKP
Ga0209693_100299544	3300027855	Soil	MAASDLVVPPPTPRIFDYPASIGLVIAAVLTVFLVIAASKFDKTGGTLTVSLLVILAFLGLVTFCALFTIPTDEITSGAIGGLVAAFGAVVAYWLSRGRPPE
Ga0209624_101998384	3300027895	Forest Soil	MADPLIVTPNPLPKLMDYPASIGIVIVVVLTSILLFVAGKFDPSGGTLTISILVVLAFLSLVTYCALFTIPTDEITSGAIGGLVAGFGAVVAYWLGRDRRPPP
Ga0209624_102076712	3300027895	Forest Soil	MAASDLVVPPPIPKLLDYPASLGLAVAVVLTSVLLVVVSRFDATGGTLTVSLLVIMAFIGLVTFCAFFTVPTDEITSGAIGGLVAAFGAVVAYWLSRGREPPR
Ga0209006_100744383	3300027908	Forest Soil	MAANDLVIPPPTPKLLDYPASIGLVIAVGLTTIMLVACNKFDPTGGTLTVSLLVILSFLSLVTYCAFFTIPTDEITSGAIGGLVAAFGAVVAYWLGRNRKDRE
Ga0209006_103100502	3300027908	Forest Soil	MADPLIVTPNPLPKLMDYPASIGIVIVVVLTSILLFVAGKFDPSGGTLTISILVVLAFLSLVTYCALFTIPTDEITSGAIGGLVAGFGAVVAYWL
Ga0247682_10038944	3300028146	Soil	MAAPDFVNPSPIPKLTDYPASIGIALVVVLTTALLFVTGRFDATGGVLTISLLVVLAFLGLVTFCAFFPVPNDEVTSSVIGGLTAAFGAVVVHWLGRNKEPPK
Ga0308309_102421551	3300028906	Soil	RERLRSKDGERLRALEGERLMADVVNPPPSPKVMDYPASVGLMIAVVLVTILLVVTSRFDPTGGTLTISLLVVLGFLGLVTFCAFFTVPTDEITSGAIGGLVAAFGAVVAYWLSRNRKDGPP
Ga0308309_110440152	3300028906	Soil	MADTVVTPNPLPKLLDYPASIGLAIAVVLTTVLLVVASRFDATGGTLTISLLVVLSFVGLVIFCSLFTIPTDEITSGAIGGLVAAFGAVVAYWLGRGNRKEPPQ
Ga0307472_1003337411	3300032205	Hardwood Forest Soil	MAAPDFVNPSPIPKLTDYPASIGIALVVVFTTALLFVTGRFDATGGVLTISLLVVLAFLGLVTFCAFFPVPNDEVTSSVIGGLTAAFGAVVVHWLGRNKKDPP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098152

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences