NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F098221

Metagenome Family F098221

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098221
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 48 residues
Representative Sequence GQGIAGITPGAGGVRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Number of Associated Samples 73
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.96 %
% of genes near scaffold ends (potentially truncated) 99.04 %
% of genes from short scaffolds (< 2000 bps) 87.50 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (72.115 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(34.615 % of family members)
Environment Ontology (ENVO) Unclassified
(89.423 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(93.269 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 25.68%    β-sheet: 0.00%    Coil/Unstructured: 74.32%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A72.12 %
All OrganismsrootAll Organisms26.92 %
unclassified Hyphomonasno rankunclassified Hyphomonas0.96 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10225838All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300000117|DelMOWin2010_c10023385All Organisms → cellular organisms → Bacteria3162Open in IMG/M
3300001450|JGI24006J15134_10042741All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.1908Open in IMG/M
3300001450|JGI24006J15134_10143272Not Available793Open in IMG/M
3300001450|JGI24006J15134_10205544All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300001450|JGI24006J15134_10237909All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium531Open in IMG/M
3300001460|JGI24003J15210_10067012Not Available1132Open in IMG/M
3300001460|JGI24003J15210_10145385All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium614Open in IMG/M
3300001589|JGI24005J15628_10116444Not Available868Open in IMG/M
3300002231|KVRMV2_100408231All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium1562Open in IMG/M
3300002231|KVRMV2_101558580All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium708Open in IMG/M
3300002242|KVWGV2_10006998All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp.4998Open in IMG/M
3300002482|JGI25127J35165_1011407All Organisms → cellular organisms → Bacteria2261Open in IMG/M
3300002482|JGI25127J35165_1091125Not Available620Open in IMG/M
3300002488|JGI25128J35275_1061072Not Available799Open in IMG/M
3300005239|Ga0073579_1323546Not Available716Open in IMG/M
3300006735|Ga0098038_1041379Not Available1689Open in IMG/M
3300006737|Ga0098037_1095802Not Available1031Open in IMG/M
3300006749|Ga0098042_1014069Not Available2450Open in IMG/M
3300006749|Ga0098042_1078353Not Available858Open in IMG/M
3300006790|Ga0098074_1162305Not Available569Open in IMG/M
3300006916|Ga0070750_10088568All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.1445Open in IMG/M
3300006929|Ga0098036_1256104All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300006947|Ga0075444_10103880All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.1240Open in IMG/M
3300007229|Ga0075468_10051309Not Available1401Open in IMG/M
3300007229|Ga0075468_10072901Not Available1124Open in IMG/M
3300008216|Ga0114898_1145970Not Available683Open in IMG/M
3300008219|Ga0114905_1130286Not Available852Open in IMG/M
3300008219|Ga0114905_1207591Not Available629Open in IMG/M
3300008220|Ga0114910_1019010All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.2431Open in IMG/M
3300008220|Ga0114910_1067063Not Available1117Open in IMG/M
3300008221|Ga0114916_1052070Not Available1137Open in IMG/M
3300009376|Ga0118722_1139839Not Available1569Open in IMG/M
3300009412|Ga0114903_1064244Not Available840Open in IMG/M
3300009412|Ga0114903_1133885Not Available542Open in IMG/M
3300009414|Ga0114909_1021649Not Available2096Open in IMG/M
3300009414|Ga0114909_1118565Not Available715Open in IMG/M
3300009414|Ga0114909_1124385Not Available693Open in IMG/M
3300009414|Ga0114909_1128237Not Available679Open in IMG/M
3300009418|Ga0114908_1197836Not Available626Open in IMG/M
3300009433|Ga0115545_1253213Not Available591Open in IMG/M
3300009481|Ga0114932_10088701All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.1934Open in IMG/M
3300009507|Ga0115572_10652963Not Available577Open in IMG/M
3300009603|Ga0114911_1189990All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium562Open in IMG/M
3300009605|Ga0114906_1205951Not Available657Open in IMG/M
3300009703|Ga0114933_10019862All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales5269Open in IMG/M
3300010148|Ga0098043_1029198Not Available1739Open in IMG/M
3300011128|Ga0151669_101281All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.1618Open in IMG/M
3300012953|Ga0163179_10502242Not Available1003Open in IMG/M
3300017697|Ga0180120_10426343Not Available519Open in IMG/M
3300017720|Ga0181383_1179435Not Available565Open in IMG/M
3300017726|Ga0181381_1016901All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1681Open in IMG/M
3300017728|Ga0181419_1145257Not Available570Open in IMG/M
3300017731|Ga0181416_1016621All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.1729Open in IMG/M
3300017731|Ga0181416_1143328Not Available575Open in IMG/M
3300017739|Ga0181433_1039490Not Available1215Open in IMG/M
3300017739|Ga0181433_1044960Not Available1130Open in IMG/M
3300017741|Ga0181421_1174347Not Available554Open in IMG/M
3300017744|Ga0181397_1101009Not Available758Open in IMG/M
3300017745|Ga0181427_1125351Not Available626Open in IMG/M
3300017746|Ga0181389_1125200Not Available695Open in IMG/M
3300017751|Ga0187219_1211748Not Available532Open in IMG/M
3300017757|Ga0181420_1081293Not Available1010Open in IMG/M
3300017757|Ga0181420_1171118Not Available641Open in IMG/M
3300017767|Ga0181406_1035215All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.1564Open in IMG/M
3300017771|Ga0181425_1101020Not Available924Open in IMG/M
3300017771|Ga0181425_1133672Not Available790Open in IMG/M
3300017772|Ga0181430_1031677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.1691Open in IMG/M
3300017776|Ga0181394_1112604Not Available863Open in IMG/M
3300017783|Ga0181379_1257922Not Available600Open in IMG/M
3300017786|Ga0181424_10462337Not Available511Open in IMG/M
3300020413|Ga0211516_10116833All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1264Open in IMG/M
3300020422|Ga0211702_10248381Not Available550Open in IMG/M
3300020440|Ga0211518_10173652Not Available1075Open in IMG/M
3300024344|Ga0209992_10018980Not Available3789Open in IMG/M
3300025079|Ga0207890_1007100All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.2495Open in IMG/M
3300025079|Ga0207890_1065582Not Available588Open in IMG/M
3300025093|Ga0208794_1083468Not Available547Open in IMG/M
3300025102|Ga0208666_1095038Not Available743Open in IMG/M
3300025120|Ga0209535_1082442Not Available1214Open in IMG/M
3300025120|Ga0209535_1099783Not Available1043Open in IMG/M
3300025120|Ga0209535_1180626Not Available622Open in IMG/M
3300025120|Ga0209535_1212862Not Available529Open in IMG/M
3300025127|Ga0209348_1032635All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.1857Open in IMG/M
3300025127|Ga0209348_1168063Not Available634Open in IMG/M
3300025127|Ga0209348_1224122Not Available512Open in IMG/M
3300025127|Ga0209348_1224504Not Available512Open in IMG/M
3300025132|Ga0209232_1079416Not Available1139Open in IMG/M
3300025132|Ga0209232_1140879Not Available778Open in IMG/M
3300025138|Ga0209634_1024145unclassified Hyphomonas → Hyphomonas sp.3329Open in IMG/M
3300025138|Ga0209634_1025021All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.3252Open in IMG/M
3300025138|Ga0209634_1145879Not Available973Open in IMG/M
3300025138|Ga0209634_1296727Not Available558Open in IMG/M
3300025168|Ga0209337_1010382All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium5887Open in IMG/M
3300025277|Ga0208180_1054375Not Available1014Open in IMG/M
3300025277|Ga0208180_1117623Not Available570Open in IMG/M
3300025280|Ga0208449_1114508Not Available620Open in IMG/M
3300025282|Ga0208030_1066167Not Available981Open in IMG/M
3300025282|Ga0208030_1078084Not Available874Open in IMG/M
3300025301|Ga0208450_1065444Not Available857Open in IMG/M
3300025305|Ga0208684_1021242All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp.2039Open in IMG/M
3300025806|Ga0208545_1125541Not Available640Open in IMG/M
3300029318|Ga0185543_1043907Not Available969Open in IMG/M
3300031519|Ga0307488_10170808Not Available1502Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine34.62%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean21.15%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater20.19%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.81%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous3.85%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment2.88%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface2.88%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.92%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.92%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.92%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.96%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.96%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.96%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002242Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey matEnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006790Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300008221Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66EnvironmentalOpen in IMG/M
3300009376Combined Assembly of Gp0137079, Gp0137080EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300011128Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, 0.02EnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017739Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017771Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300020413Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)EnvironmentalOpen in IMG/M
3300020422Marine prokaryotic communities collected during Tara Oceans survey from station TARA_076 - TARA_B100000513 (ERX555999-ERR599126)EnvironmentalOpen in IMG/M
3300020440Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025079Marine viral communities from the Pacific Ocean - LP-48 (SPAdes)EnvironmentalOpen in IMG/M
3300025093Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025277Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025301Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)EnvironmentalOpen in IMG/M
3300025305Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300029318Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1022583823300000116MarineFGQGIAGITPGAGQTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIFN*
DelMOWin2010_1002338513300000117MarineGAGTTRLTDSPEAAQSSPLMQALGIGLAGADIYGRIF*
JGI24006J15134_1004274113300001450MarinePGAGTTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF*
JGI24006J15134_1014327223300001450MarineMAIDEPRQALSRFGQGIAGXTPGAGTTRLTDQPAAAQSSPLMQALGIGLAGADIYGRIFN
JGI24006J15134_1020554423300001450MarineGTTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIFSNK*
JGI24006J15134_1023790923300001450MarineAGITPGAGTTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF*
JGI24003J15210_1006701233300001460MarineAGTTRLTDSPEAAQSSPLMQALGIGLAGADIYGRIFN*
JGI24003J15210_1014538513300001460MarineTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIFSNK*
JGI24005J15628_1011644423300001589MarineGIAQITPGAGAVRLDPTAATAPSASPLMQALGIGLAGADIYGRIFRGTS*
KVRMV2_10040823113300002231Marine SedimentGAGSVQIGESQAAAQASPLMKALGLGLAGADIYGRIF*
KVRMV2_10155858023300002231Marine SedimentLSMFGQGIAGLTPMGAGSVQIAPSAVETSTGASPLMTALGVGLAGADIYGRIFGPRKS*
KVWGV2_1000699813300002242Marine SedimentLGSGITQLTPGAGAVSISDAPEAASASPLATALGLGLAGADIYGRLFK*
JGI25127J35165_101140713300002482MarineAAQMAIDEPRQALSRFGQGIAGITPGAGQIRIAEAPAAAAGASPLMKALGLGLAGADIYGRIF*
JGI25127J35165_109112523300002482MarineMAIDEPRQALNRFGTGIQVITPGAGSVRLGEAQTAAEASPLMKALGLGLAGADIY
JGI25128J35275_106107223300002488MarineEPRQALSRFGQGIAAITPGAGSVQIGESQAAAGASPLMKALGLGLAGADIYGRIF*
Ga0073579_132354613300005239MarineITPGAGTTRLTDSPAAAAQSSPLMQALGIGLAGADIYGRIF*
Ga0098038_104137913300006735MarineEDPRRRLSMFGQGISGLTPGAGTVQLIPTEAPAAGPSPLMQALGVGLAGADIYGRIFGGRRTT*
Ga0098037_109580233300006737MarineGQGITGLTPGAGTVQLAETPAEAAAGASPLMTALGLGLAGADIYGRLFPRSG*
Ga0098042_101406933300006749MarineFGQGISGLTPGAGTVQLMPTEAPAERPSPLMQALGVGLAGADIYGRIFGGKKTS*
Ga0098042_107835313300006749MarineGISGLTPGAGTVQLMPTEAPAAGPSPLMQALGVGLAGADIYGRIFGGKK*
Ga0098074_116230523300006790MarineEPRQALARFGQGIAGITPGAGSIRIGEAPAAAAGASPLMKALGIGLAGADIYGRIF*
Ga0070750_1008856833300006916AqueousQGIAGITPGAGTTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF*
Ga0098036_125610413300006929MarinePRQALDRLGQGIAGITPGAGGVRLTDQPAAAQSSPLMQALGIGLAGADIYGRIF*
Ga0075444_1010388033300006947MarineAQMAVDDPRRRLNMLGQGISGLTPGAGSVIAKQTADAAGSSPLESALGAGLMGADIYGSIFGSRKS*
Ga0075468_1005130913300007229AqueousDRFGQGIAGITPGAGQTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF*
Ga0075468_1007290113300007229AqueousDRFGQGIAGITPGAGQTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIFN*
Ga0114898_114597023300008216Deep OceanGIAAITPGAGSVQIGESQAAAGASPLMKALGLGLAGADIYGRIF*
Ga0114905_113028613300008219Deep OceanQGITGLTPGAGTVDIGESPAAQQASPLATALGLGLAGADIYGRIFKN*
Ga0114905_120759113300008219Deep OceanGVRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF*
Ga0114910_101901033300008220Deep OceanPRQALDRFGQGIAGITPGAGGVRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF*
Ga0114910_106706333300008220Deep OceanDRLGQGIAGITPGAGGVKLTDAPAAAQSSPLMQALGIGLAGADIYGRIF*
Ga0114916_105207013300008221Deep OceanAQMAVDDPRRRLNMLGQGISGLTPGAGTVIAKQTADASSASPLESALGAGLMGADIYGKIFG*
Ga0118722_113983933300009376MarineGGSVTFSEAPQAAGASPLMTALGLGLAGADIYGRIFAPRN*
Ga0114903_106424423300009412Deep OceanPRQALDRLGQGIAGVTRGAGNVRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF*
Ga0114903_113388523300009412Deep OceanAGSVQIGESQAAAGASPLMKALGLGLAGADIYGRIF*
Ga0114909_102164933300009414Deep OceanQEPRQALDRFGQGIAGITPGAGGVRLTDSPAAAQSSPLMQALGLGLAGADIYGRIF*
Ga0114909_111856513300009414Deep OceanTGAGRVSLEEAPAAAQASPLMKALGLGLAGADIYGRIF*
Ga0114909_112438513300009414Deep OceanQEPRQALDRFGQGIAGITPGAGGVRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF*
Ga0114909_112823723300009414Deep OceanAGGVKLTDAPAAAQSSPLMQALGLGLAGADIYGRIF*
Ga0114908_119783623300009418Deep OceanLAMFGQGITGLTPGAGSVQLSPEQPAAAQSSPLMTALGLGLAGADIYGRIFK*
Ga0115545_125321313300009433Pelagic MarineSEPRQALDRFGQGVAGITPGAGTVKIGEAPAGASQSSPLMQALGIGLAGADIYGRIF*
Ga0114932_1008870133300009481Deep SubsurfaceFGQGIAAITPGAGSVQIGESQAAAQASPLMKALGLGLAGADIYGRIF*
Ga0115572_1065296313300009507Pelagic MarinePRQALDRFGQGVAGITPGAGTVRIGEAPAGASQSSPLMQALGIGLAGADIYGRIF*
Ga0114911_118999013300009603Deep OceanMAVQDPRDRLSMFGQGIAGLTPMGAGSVQIAPSAVETSTGASPLMTALGVGLAGADIYGRIFGGRKTT*
Ga0114906_120595123300009605Deep OceanITPGAGGVRLTDSPAAAQSSPLMQALGLGLAGADIYGRIF*
Ga0114933_1001986243300009703Deep SubsurfaceITPGAGSVQIGESQAAAQASPLMKALGLGLAGADIYGRIF*
Ga0098043_102919833300010148MarineLSMFGQGISGLTPGAGTVQLMPTEAPAAGASPLMQALGVGLAGADIYGRIFGGKRTT*
Ga0151669_10128113300011128MarineLLGTGITSITPGAGGVTLQDAPMAVQASPLTQALGFGLMGADIYGRIFRPTGN*
Ga0163179_1050224213300012953SeawaterLLGTGITSITPGAGGVTLQPEQMAAQTSPLSQALGFGLMGADIYGRIFRPTG*
Ga0180120_1042634323300017697Freshwater To Marine Saline GradientQALARFGQGIAGITPGAGQTMLSPAPSQAPQASPLMKALGIGLAGADIYGRIF
Ga0181383_117943513300017720SeawaterGIAAITPGAGSVQIGESQAAAGASPLMKALGLGLAGADIYGRIF
Ga0181381_101690133300017726SeawaterGRFGQGIAAITPGAGTVSFGESPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0181419_114525723300017728SeawaterGVTQLTPGAGAVTLSNAQAAPSASPLMTALGLGLAGADIYGRIFGGKK
Ga0181416_101662133300017731SeawaterTPGAGSIQIADTPAAPQASPLTTALGLGLAGADIYGRIFGNN
Ga0181416_114332823300017731SeawaterPGAGQTRLGPAPAEAEQSSPLMQALGIGLAGADIYGRIFN
Ga0181433_103949013300017739SeawaterRFGQGIAAITPGAGSVQLSETPAAAQSSPLATALGLGLAGADIYGRIF
Ga0181433_104496013300017739SeawaterGVMGITPGAGSIQIADTPAASQASPLTTALGLGLAGADIYGRIFGNN
Ga0181421_117434713300017741SeawaterSGTLDRFGQGIAGITPGAGGVRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0181397_110100923300017744SeawaterRFGQGIAAITPGAGTVSFGEAQGGAAQSSPLATALGLGLAGADIYGRIFGGR
Ga0181427_112535113300017745SeawaterGAGTTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIFN
Ga0181389_112520013300017746SeawaterIDEPRQALSRFGQGIAGITPGAGTIRLSDAPAAAQSSPLMQALGIGLAGADIYGRIFQN
Ga0187219_121174813300017751SeawaterLTPGAGAVTLSNAQAAPSASPLTTALGLGLAGADIYGRIFGGNKT
Ga0181420_108129313300017757SeawaterPRQALDRLGQGIAGVTRGAGGVTLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0181420_117111823300017757SeawaterGQGIAGITPGAGTTRLTDSPAAAQSSPLMQALGIGLVGADIYGRIF
Ga0181406_103521533300017767SeawaterGQGIAGITPGAGGVRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0181425_110102023300017771SeawaterRPRQALDRFGQGIAGITPGAGQTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIFN
Ga0181425_113367213300017771SeawaterITPGAGQTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0181430_103167713300017772SeawaterGGVRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0181394_111260413300017776SeawaterGITPGAGTTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0181379_125792223300017783SeawaterLDRFGQGIAGITPGAGGVRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0181424_1046233713300017786SeawaterGAGTVSFGETPPAPQSSPLTTALGLGLAGADIYGRIFGGR
Ga0211516_1011683333300020413MarineINEPRQALDRLGQGIAGITPGAGGVRLTDQPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0211702_1024838113300020422MarineAAQMAIDEPRQALSRFGQGIAGITPGAGQIRIAEAPAAAAGASPLMKALGLGLAGADIYGRIFTN
Ga0211518_1017365233300020440MarineIAAITPGAGSVQIGESQAAAQASPLMKALGLGLAGADIYGRIF
Ga0209992_1001898033300024344Deep SubsurfaceGQGIAGLTPMGAGSVKIAPSAVETSTGASPLMTALGVGLAGADIYGRIFGGRKTT
Ga0207890_100710013300025079MarineDRFGQGIAGITPGAGTTRLTDSPEAAQSSPLMQALGIGLAGADIYGRIF
Ga0207890_106558213300025079MarineSRFGQGIAGITPGAGTTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0208794_108346813300025093MarineRFGQGIAGITPGAGSIRIGEAPAAAAGASPLMKALGLGLAGADIYGRIF
Ga0208666_109503823300025102MarineDPRRRLSMFGQGISGLTPGAGTVQLIPTEAPAAGPSPLMQALGVGLAGADIYGRIFGGRRTT
Ga0209535_108244233300025120MarineQGIAGITPGAGTTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0209535_109978323300025120MarineMAIQEPRQALDRFGQGIAGITPGAGTTRLGPAPAEAAQSSPLMQALGIGLAGADIYGRIF
Ga0209535_118062623300025120MarineQALSRFGQGIAGITPGAGTTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0209535_121286213300025120MarineITPGAGTTRLTDSPEAAQSSPLMQALGIGLAGADIYGRIFN
Ga0209348_103263533300025127MarinePRQALARFGQGIAAITPGAGSVTLNPAAAEPAGASPLMKALGIGLAGADIYGRIF
Ga0209348_116806313300025127MarineGVMGITPGAGSIQIADTPAAPQASPLATALGLGLAGADIYGRIFD
Ga0209348_122412213300025127MarineTPGAGSVQIGESQAAAGASPLMKALGLGLAGADIYGRIF
Ga0209348_122450423300025127MarinePGAGTVQFGTSGDTGTQQASPLMQALGIGLAGADIYGRIFN
Ga0209232_107941613300025132MarinePGAGSIQIADTPAAPQASPLTTALGLGLAGADIYGRIFGNN
Ga0209232_114087913300025132MarineAGITQLTPGAGAVRLTDAPMAASASPLTQALGLGLAGADIYGRIFRGTN
Ga0209634_102414533300025138MarinePGAGAVTLSNAQAAPSASPLTTALGLGLAGADIYGRIFGGNK
Ga0209634_102502113300025138MarineGTTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0209634_114587913300025138MarinePRQALDRFGQGIAGITPGAGGVRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0209634_129672723300025138MarineFGQGIAGITPGAGTTRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0209337_101038243300025168MarineLGMFGQGIAALSGTSGAGSVQVNPTAATAPSSSPLMQALGVGIAGADIYGRLFPRGFGN
Ga0208180_105437513300025277Deep OceanTGAGRVSLEEAPAAAQASPLMKALGIGLAGADIYGRIF
Ga0208180_111762323300025277Deep OceanGVTRGAGTVRLTDSPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0208449_111450813300025280Deep OceanMFGQGITGLTPGAGSVQLSPEQPTAAQSSPLMTALGLGLAGADIYGRIFK
Ga0208030_106616713300025282Deep OceanGAGGVRLTDAPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0208030_107808413300025282Deep OceanTGLTPGAGSVQLSPEQPAAAQSSPLMTALGLGLAGADIYGRIFK
Ga0208450_106544423300025301Deep OceanQEPRQALDRFGQGIAGITPGAGGVRLTDSPAAAQSSPLMQALGLGLAGADIYGRIF
Ga0208684_102124213300025305Deep OceanGGVKLTDAPAAAQSSPLMQALGIGLAGADIYGRIF
Ga0208545_112554113300025806AqueousRFGQGIAGITPGAGTTRLGPAPAEAPQSSPLMQALGIGLAGADIYGRIFK
Ga0185543_104390723300029318MarineIAGITPGAGAITLSPAASEAPQASPLMKALGIGLAGADIYGRIF
Ga0307488_1017080833300031519Sackhole BrineITQLTPGAGAVTISDAEAAPSASPLTTALGLGLAGADIYGRIFGGNKT

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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