Metagenome Family F098251

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098251
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	94 residues
Representative Sequence	MAKFNQKHLKRLRTLSPEEAWNQIVRDATVGTRVDPEKFLKNLSPLPNFKNRAEVRRWLDWVLAKIDLDMSVEEAKVLHTCCDTLAALFKTVDRR
Number of Associated Samples	45
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.96 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	86.54 %
Associated GOLD sequencing projects	39
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.615 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (39.423 % of family members)
Environment Ontology (ENVO)	Unclassified (57.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.462 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.28% β-sheet: 0.00% Coil/Unstructured: 44.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.128.1.4: Aristolochene/pentalenene synthase	d4kwda_	4kwd	0.66143
a.128.1.0: automated matches	d5dz2a_	5dz2	0.64956
a.128.1.0: automated matches	d5nx5a_	5nx5	0.64453
a.128.1.0: automated matches	d7bzba2	7bzb	0.63702
a.128.1.0: automated matches	d6q4sa_	6q4s	0.63609

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00072	Response_reg	8.65
PF00076	RRM_1	4.81
PF00069	Pkinase	2.88
PF13545	HTH_Crp_2	1.92
PF13505	OMP_b-brl	1.92
PF12844	HTH_19	1.92
PF05239	PRC	1.92
PF03446	NAD_binding_2	1.92
PF12796	Ank_2	0.96
PF12543	DUF3738	0.96
PF06348	DUF1059	0.96
PF01068	DNA_ligase_A_M	0.96
PF02518	HATPase_c	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	11.54
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.96
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
All Organisms	root	All Organisms	40.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
cellular organisms	root	All Organisms → cellular organisms	39.42 %
Viruses	superkingdom	All Organisms → Viruses	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.96 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	21.15 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.19 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.96 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.19 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101397709	Not Available	1122	Open in IMG/M
3300000550\|F24TB_12354974	Not Available	1004	Open in IMG/M
3300000559\|F14TC_100266856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1694	Open in IMG/M
3300000789\|JGI1027J11758_12719096	Not Available	563	Open in IMG/M
3300001431\|F14TB_101235570	Not Available	772	Open in IMG/M
3300001431\|F14TB_104951866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300004633\|Ga0066395_10032543	All Organisms → cellular organisms → Bacteria	2186	Open in IMG/M
3300004633\|Ga0066395_10303927	Not Available	873	Open in IMG/M
3300005332\|Ga0066388_100599515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1724	Open in IMG/M
3300005332\|Ga0066388_101234518	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1281	Open in IMG/M
3300005332\|Ga0066388_101267414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1267	Open in IMG/M
3300005332\|Ga0066388_102203861	All Organisms → cellular organisms → Bacteria → Acidobacteria	994	Open in IMG/M
3300005332\|Ga0066388_102855403	Not Available	883	Open in IMG/M
3300005332\|Ga0066388_107334049	Not Available	554	Open in IMG/M
3300005332\|Ga0066388_108288498	Not Available	518	Open in IMG/M
3300005713\|Ga0066905_100064022	All Organisms → cellular organisms → Bacteria	2329	Open in IMG/M
3300005713\|Ga0066905_101622091	Not Available	592	Open in IMG/M
3300005764\|Ga0066903_100235510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2799	Open in IMG/M
3300005764\|Ga0066903_101455037	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300005764\|Ga0066903_102703642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300005764\|Ga0066903_102758590	Not Available	953	Open in IMG/M
3300005764\|Ga0066903_103742523	Not Available	818	Open in IMG/M
3300005764\|Ga0066903_105864619	Not Available	644	Open in IMG/M
3300005764\|Ga0066903_106013084	Not Available	636	Open in IMG/M
3300006049\|Ga0075417_10031240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2207	Open in IMG/M
3300006049\|Ga0075417_10211193	Not Available	921	Open in IMG/M
3300006049\|Ga0075417_10584766	Not Available	567	Open in IMG/M
3300006844\|Ga0075428_100193676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2198	Open in IMG/M
3300006844\|Ga0075428_100528423	Not Available	1262	Open in IMG/M
3300006844\|Ga0075428_100565237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1215	Open in IMG/M
3300006844\|Ga0075428_101835237	Not Available	631	Open in IMG/M
3300006844\|Ga0075428_102535673	Not Available	525	Open in IMG/M
3300006845\|Ga0075421_100068420	All Organisms → cellular organisms → Bacteria	4485	Open in IMG/M
3300006845\|Ga0075421_100190436	Not Available	2544	Open in IMG/M
3300006845\|Ga0075421_100810886	Not Available	1077	Open in IMG/M
3300006845\|Ga0075421_101146023	Not Available	871	Open in IMG/M
3300006846\|Ga0075430_100997461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300006847\|Ga0075431_101031118	Not Available	789	Open in IMG/M
3300006852\|Ga0075433_10675621	Not Available	905	Open in IMG/M
3300006854\|Ga0075425_100466012	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300006854\|Ga0075425_102751812	Not Available	542	Open in IMG/M
3300006871\|Ga0075434_100130373	All Organisms → cellular organisms → Bacteria	2533	Open in IMG/M
3300006871\|Ga0075434_100735494	Not Available	1004	Open in IMG/M
3300006969\|Ga0075419_10338895	Not Available	1021	Open in IMG/M
3300007076\|Ga0075435_100218089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1620	Open in IMG/M
3300009094\|Ga0111539_10989433	Not Available	978	Open in IMG/M
3300009792\|Ga0126374_10585322	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300010043\|Ga0126380_10957672	Not Available	717	Open in IMG/M
3300010046\|Ga0126384_10180862	Not Available	1652	Open in IMG/M
3300010046\|Ga0126384_10718725	Not Available	887	Open in IMG/M
3300010046\|Ga0126384_10839387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	825	Open in IMG/M
3300010046\|Ga0126384_11005413	Not Available	759	Open in IMG/M
3300010047\|Ga0126382_10069785	All Organisms → cellular organisms → Bacteria → Acidobacteria	2149	Open in IMG/M
3300010047\|Ga0126382_10378880	All Organisms → Viruses → Predicted Viral	1095	Open in IMG/M
3300010047\|Ga0126382_11889987	Not Available	564	Open in IMG/M
3300010047\|Ga0126382_12070835	Not Available	544	Open in IMG/M
3300010047\|Ga0126382_12160760	Not Available	534	Open in IMG/M
3300010048\|Ga0126373_11909703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300010358\|Ga0126370_10024822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3513	Open in IMG/M
3300010358\|Ga0126370_11404440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300010359\|Ga0126376_12230565	Not Available	593	Open in IMG/M
3300010360\|Ga0126372_10431047	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300010360\|Ga0126372_10473082	All Organisms → cellular organisms → Bacteria → Acidobacteria	1168	Open in IMG/M
3300010360\|Ga0126372_11343079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300010361\|Ga0126378_12939057	Not Available	543	Open in IMG/M
3300010362\|Ga0126377_10028970	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4661	Open in IMG/M
3300010362\|Ga0126377_10151039	All Organisms → cellular organisms → Bacteria	2182	Open in IMG/M
3300010362\|Ga0126377_10603897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1142	Open in IMG/M
3300010362\|Ga0126377_12519777	Not Available	590	Open in IMG/M
3300010366\|Ga0126379_12085061	Not Available	669	Open in IMG/M
3300010376\|Ga0126381_102985654	Not Available	672	Open in IMG/M
3300010398\|Ga0126383_10250719	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300010398\|Ga0126383_10332586	Not Available	1532	Open in IMG/M
3300010398\|Ga0126383_10983589	Not Available	932	Open in IMG/M
3300010398\|Ga0126383_11461589	Not Available	773	Open in IMG/M
3300010398\|Ga0126383_11473744	Not Available	770	Open in IMG/M
3300010398\|Ga0126383_11769864	Not Available	706	Open in IMG/M
3300010398\|Ga0126383_11982698	Not Available	670	Open in IMG/M
3300010398\|Ga0126383_12386916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300010398\|Ga0126383_12575304	Not Available	592	Open in IMG/M
3300012353\|Ga0137367_11165932	Not Available	517	Open in IMG/M
3300012354\|Ga0137366_10338468	Not Available	1103	Open in IMG/M
3300012948\|Ga0126375_10013671	All Organisms → cellular organisms → Bacteria	3551	Open in IMG/M
3300012948\|Ga0126375_10430621	Not Available	963	Open in IMG/M
3300012948\|Ga0126375_10600733	Not Available	840	Open in IMG/M
3300012971\|Ga0126369_10262616	Not Available	1706	Open in IMG/M
3300012971\|Ga0126369_10880964	Not Available	980	Open in IMG/M
3300012971\|Ga0126369_10988108	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300012971\|Ga0126369_11244389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300015371\|Ga0132258_11608717	Not Available	1640	Open in IMG/M
3300015371\|Ga0132258_12697890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1239	Open in IMG/M
3300015371\|Ga0132258_12840801	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300015372\|Ga0132256_101235131	Not Available	860	Open in IMG/M
3300015373\|Ga0132257_104325092	Not Available	517	Open in IMG/M
3300015374\|Ga0132255_102416551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300015374\|Ga0132255_105653511	Not Available	529	Open in IMG/M
3300027873\|Ga0209814_10069526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1479	Open in IMG/M
3300027874\|Ga0209465_10034418	All Organisms → cellular organisms → Bacteria → Acidobacteria	2394	Open in IMG/M
3300027880\|Ga0209481_10130856	Not Available	1229	Open in IMG/M
3300027880\|Ga0209481_10205428	Not Available	985	Open in IMG/M
3300027880\|Ga0209481_10699392	Not Available	526	Open in IMG/M
3300027909\|Ga0209382_10466674	Not Available	1396	Open in IMG/M
3300027909\|Ga0209382_10851219	Not Available	965	Open in IMG/M
3300027909\|Ga0209382_11166434	Not Available	790	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.38%
Host-Associated	Host-Associated	34.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.38%
Plants	Host-Associated → Plants	34.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	27.88%
Loam	Environmental → Terrestrial → Soil → Loam	22.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	27.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	39.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	27.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	18.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1013977091	3300000364	Soil	MAKPNEKHLRLLRTISTEEAWMQIVKDATAGTTVDSEKFLQKLSPLPNFKNRTAVRKWLDWVLAKIDLDMSDEEAKVLHICCDTLAALFKLSPK*
F24TB_123549742	3300000550	Soil	MAKFNQKHLKTLRTLSPEEAWNQIVRDATVGTRVDPEKFLKNLSXXPNFKNRAEVRRWLDWVLAKIDLDMSVEEAKVLHICCDTLAALFKTTDPL*
F14TC_1002668563	3300000559	Soil	MAKFHHKHLTWLSTLSTDEAWKQIAKDATLGTTVDPERFLQKLSPLPNCKNRMQVRRWLDWVIAKIDLDMTDEEAKVLHICCGTLAALFKLSPK*
JGI1027J11758_127190962	3300000789	Soil	MAKFNQKHLKWLRTLSSEEAWKQIVKDATAGTRVDPEMFLQNVSPLPNLKNRPAVRRWLGWVLAKIDNMSVEEAKVLHICCDTLTALFKKTAGSDGE*
F14TB_1012355701	3300001431	Soil	LKTLRTLSPEEAWNQIVRDATVGTRVDPEKFLKNLSPLPNFKNRAEVRRWLDWVLAKIDLDMSVEEAKVLHICCDT
F14TB_1049518662	3300001431	Soil	MAKFHHKRLKWLSTTSTGEAWKQIVKDATIGTNVDPEKFLQKLSPLPNFKNRTHVRRWLGWVLVKIDLDMSVEEAKVLHICCDTLAALFKVASPDK*
Ga0066395_100325432	3300004633	Tropical Forest Soil	MAKFNQKHLKRLRTLSPEEAWNQIVRDATVGTRVDPETFLKNLSPLPNFKNRAEVRRWLDWVLAKIDVDMSVEEAKVLRTCCDTLAALFKTTDRR*
Ga0066395_103039271	3300004633	Tropical Forest Soil	MAKPDQKHLKWLRTLSTEEAWKQIVKDATADSTIDPEKFLEQLSPLPNLKNRTAVRKWLDWVLMKIDLNMSVAEAKVLHICCDTLTALFNLSHK*
Ga0066388_1005995153	3300005332	Tropical Forest Soil	MAKFHHKHLKWLRTLSTDEAWKQIAKDATAGTTVDPETFLQKLSPLPNFKNRTQVRRWLGWVLAKIDPDMTVEEAKVLHICCDTLAALFKVASPDE*
Ga0066388_1012345181	3300005332	Tropical Forest Soil	MANFNQKHLKRLRTLSPEEAWNQIVRDATVGTRVDPETFLKNLSPLPNFKNRAEVRRWLGWVLARIDVDMSVEEAKVLRTCCDTLAALFKTTDRL*
Ga0066388_1012674142	3300005332	Tropical Forest Soil	MAKPNEQYLKWLSTHPPAEAWKRIVKDATVGAAVDPEKFLKSVSPLPYFKDRMEVCRWLDFVLPKIDRDMSVEEAKVLHICCDTLAASFKKAA*
Ga0066388_1022038612	3300005332	Tropical Forest Soil	MAKFNQKHLKKLRTLSPEEAWNQIVGDATVGTRVDPEKFLKKLSPLPNFKNSAEVRRWLDWVLAKIDLDMSIEEAKVLHICCDTLAALFKTN*
Ga0066388_1028554032	3300005332	Tropical Forest Soil	VLGKSKEKYVKWLSTLPTEEAWKRILKDAADGTRVDPENFLKSISPLPDFKKPTEVGRWFDLVLAKIDLDMSVEEAKVLHVCCDALTDFFKKTA*
Ga0066388_1073340491	3300005332	Tropical Forest Soil	MAKSNQKHFKWLRTLSSEEAWKQIVQDAAAGMAVDPEKFLQKLSPLPNLKKPPEVRRWLGWVIVKIDNMSVEEARVLTTCCDTLTALFKLSAK*
Ga0066388_1082884981	3300005332	Tropical Forest Soil	MAKFNQKHLKKLRTLSTEEAWNQIVRDATVGTRVDPEKFLRNLSPLPNFKNSAEVRRWLDWVLAKIDQDMSVEEAKVLHICCDTLAAMFKTTDPR*
Ga0066905_1000640222	3300005713	Tropical Forest Soil	MAKFNQKHLKSLRTLSTEEAWKQIVKDATDGTKVDPETFLQKLSPLPNLKDRPAVRRWLGWVLAKIDNMSVEEAKVLHACCDVLTALFKVSRK*
Ga0066905_1016220912	3300005713	Tropical Forest Soil	RLRTLSPEEAWNQIVRDATVGTRVDPETFLKNLSPLPNFKNRAEVRRWLDWVLAKIDVDMSVEEAKVLRTCCDTLAALFKTTDRR*
Ga0066903_1002355101	3300005764	Tropical Forest Soil	MAKPNQTHLKWLRTLSTEEAWNRIVKDATAGTRVDPEKFLQELSPLPNLKNRPAVRRWLGWVLAKIDNMSVEEAKVLHACCDVLTA
Ga0066903_1014550371	3300005764	Tropical Forest Soil	QKQLKWLRTLSTEEAWTQIIKEASVGTRVDPETLLQKLSPLPNLKNRPAVRRWLGWVLAKIDNMSGEEAKVLHACCDVLTALFKVSRK*
Ga0066903_1027036422	3300005764	Tropical Forest Soil	MAKFHHKRLKWLGTTSTDEAWKQIVKDATVGTTVDPEKFLQKLSPLPNFKNRTHIRRWLDWVLAKIDLDMSVEEAKVLHICCDTLAALLKVASPDK*
Ga0066903_1027585901	3300005764	Tropical Forest Soil	MAKFNQEHLKWLRTLSTEEAWKQIAKDASTNTRVDPEIFLQELSPLPNPKKRSEVRRWLGWVLAKIDNMSFEEAKVLHICCDTLTALFKLSRK*
Ga0066903_1037425231	3300005764	Tropical Forest Soil	MAKPNEQYLKWLSIHPPAEAWKRIVKDATVGAAVDPEKFLKSVSPLPYFKDRMEVYRWLDFVLPKIDRDMSVEEAKVLHICCDTLAASFKKTA*
Ga0066903_1058646191	3300005764	Tropical Forest Soil	MAKFNQKHLKRLRTLSTEEAWNQIVRDATVGTRVDPEKFLRDLSPLPNFKNSAEVRRWLDWVLAKIDQDMSVEEAKVLHICCDTLAAMFKTTNQGE*
Ga0066903_1060130842	3300005764	Tropical Forest Soil	MARFNQKQLKWLRTLSTEEAWTQIIKDATADTIVDPETLLQKLSPLPNLKNRPAVRRWLGWVLTKIDDMSVEEAKVLHTCCDTLTALFKVSRK*
Ga0075417_100312404	3300006049	Populus Rhizosphere	MAKHNQKHLRWLRTLSTDEAWKQIAKDATAGTRVDPEMFLQNISPLPNLKNHPAVRRWLGWVLAKIDNMSVEEAKVLHICCDTLTALFKVARPDK*
Ga0075417_102111931	3300006049	Populus Rhizosphere	MAKFNQKHLKTLRTLSPEEAWNQIVRDATVGTRVDPEKFLKNLSPLPNFKNRAEVRRWLDWVLAKIDLDMSVEEAKVLHICCDTLAALFKTTDPR*
Ga0075417_105847661	3300006049	Populus Rhizosphere	LRMAKFHHKRLKWLSTTSTDEAWKQIVKDATIGTTVDPEKFLQKLSPLPNFKNRTHVRKWLGWVLVKIDLDMSVEEAKVLHICCDTLAALFKLSPK*
Ga0075428_1001936761	3300006844	Populus Rhizosphere	MAKFNQKHLKRLRTLSPEEAWNQILRDATTGTRVDPEKFLKNLSPLPNFKNRAEVRRWLDWVLAKIDVDMSVEEAKVLRTCCDTLAALFKTTDRG*
Ga0075428_1005284234	3300006844	Populus Rhizosphere	RMAKLHHKHLQWLSTLSTDEAWKQIVKDATIGTNVDPEKLLQKLSPLPNFKNRTHVRKWLGWVLVKIDLDMSVEEAKVLHICCDTLAALFKLSPK*
Ga0075428_1005652371	3300006844	Populus Rhizosphere	LRTLSTDEAWKQIAKDATAGTRVDPEMFLQNISPLPNLKNHPAVRRWLGWVLAKIDNMSVEEAKVLHICCDTLTALFKVARPDK*
Ga0075428_1018352372	3300006844	Populus Rhizosphere	MAKPNQTQLKWLRTLSTEEAWKQIVKDAAAGTTVDPEKLLQKLSPLPNLKNRPGVRRWLGWVLAKIDLDMSVQEAKVLHLCCDTLAALFKLSPK*
Ga0075428_1025356731	3300006844	Populus Rhizosphere	DEAWKQIAKDATIGTTVDPEKLLQKLSPLPNLKNRPGVRRWLGWVLAKIDLDMSVEEAKVLHTCCDTLAALFNVSRK*
Ga0075421_1000684204	3300006845	Populus Rhizosphere	MAKLHHKHLQWLSTLSTDEAWKQIVKDATIGTNVDPEKLLQKLSPLPNFKNRTHVRKWLGWVLVKIDLDMSVEEAKVLHICCDTLAALFKLSPK*
Ga0075421_1001904364	3300006845	Populus Rhizosphere	MAKFHHKHLKWLRALSTDEAWKQIAKDATIGTTVDPEKLLQKLSPLPNLKNRPGVRRWLGWVLAKIDLDMSVEEAKVLHTCCDTLAALFNVSRK*
Ga0075421_1008108861	3300006845	Populus Rhizosphere	MAKFNQKHLKKLRTLSPEEAWNQIVRDATVGTRVDPEKFLKKLSPLPNFKNSAEVRRWLDWVLAKIDLDMSIEEAKVLHNCCDILAALFKTTNPR*
Ga0075421_1011460232	3300006845	Populus Rhizosphere	QKHLKRLRTLSPEEAWNQILRDATTGTRVDPEKFLKNLSPLPNFKNRAEVRRWLDWVLAKIDVDMSVEEAKVLRTCCDTLAALFKTTDRG*
Ga0075430_1009974613	3300006846	Populus Rhizosphere	MAKHNQKHLRWLRTLSTDEAWKQIARDATAGTRVDPEMFLQNISPLPNLKNHPAVRRWLGWVLAKIDNMSVEEAKVLHICCDTLTALFKVARPDK*
Ga0075431_1010311182	3300006847	Populus Rhizosphere	TLSPEEAWNQILRDATTGTRVDPEKFLKNLSPLPNFKNRAEVRRWLDWVLAKIDVDMSVEEAKVFRNCCDTLAALFKTTDRG*
Ga0075433_106756213	3300006852	Populus Rhizosphere	HGGAWRLRMAKFNQKHLKRLRTLSPEEAWNQIVRDATVGTRVDPEKFLKNLSPLPNFKNRAEVRRWLDWVLAKIDLDMSVEEAKVLHTCCDTLAALFKTVDRR*
Ga0075425_1004660122	3300006854	Populus Rhizosphere	MAKFNQKHLKKLRTLSPEEAWNQIVRDATVGTRVDFEKFLKKLSPLSNFKNSAEVRRWLDWVFAKIDLDMSIEEAKVLHICCDTLAALFKTTNQG*
Ga0075425_1027518122	3300006854	Populus Rhizosphere	MAKFNQKDLKRLRTLSPEEAWNQIVRDATVGTRVDPEKFLKNLSPLPNFKNRAEVRRWLDWVLAKIDLDMSVEEAKVLHTCCDTLAALFKTVDRR*
Ga0075434_1001303733	3300006871	Populus Rhizosphere	MAKFNQKHLKRLRTLSPEEAWNQIVRDATVGTRVDPEKFLKNLSPLPNFKNRAEVRRWLDWVLAKIDLDMSVEEAKVLHTCCDTLAALFKTVDRR*
Ga0075434_1007354943	3300006871	Populus Rhizosphere	LKWLRTLSTEEAWKQIVKDAAAGTTVDPEKLLQKLSPLPNLKNRPGVRRWLGWVLAKIDLDMSVQEAKVLHLCCDTLAALFKLSPK*
Ga0075419_103388951	3300006969	Populus Rhizosphere	MAKFNQKHLKKLRALSPEEAWNQIVGDATVGTRVDPEKFLKKLSPLPNFKNSAEVRRWLDWVLAKIDLDMSVEEAKVLHICCDTLAALFKTTDPR*
Ga0075435_1002180894	3300007076	Populus Rhizosphere	MAKHNQKHLRWLRTLSTDEAWKQIAKDATAGTRVDPEMFLQNISPLPNLKNHPAVRRWLGWVLAKIDNMSVEEAKVLHICCDTLTALFKVASPDK*
Ga0111539_109894331	3300009094	Populus Rhizosphere	MDHGGAWRLRMAKFNQKHLKRLRTLSPEEAWNQIVRDATVGTRVDPEKFLKNLSPLPNFKNRAEVRRWLDWVLAKIDLDMSVEEAKVLHTCCDTLAALFKTVDRR*
Ga0126374_105853222	3300009792	Tropical Forest Soil	MAKFNQKHLKRLRTLSPEEAWNQIVRDATVGTRVHPETFLKNLSPLPNFKNRAEVRRWLNWVLAKIDVDMSVEEAKVLRTCCDTLAALFKTT
Ga0126380_109576721	3300010043	Tropical Forest Soil	MAKFHHKHLKWLRTLSTDEAWKQIVKDATVGTNVDPEKFLQKLSPLPNFKNRTHVRRWLGWVLEKIDLDMSVEETKVLHMCCDTLAALFKVASPDK*
Ga0126384_101808622	3300010046	Tropical Forest Soil	MAKSNQKHFKWLRTLSSEEAWKQIVQDAAAGMAVDPETFLQKLSPLPNLKKPPEVRRWLGWVIVKIDNMSVEEAKILHTCCDMLTALFKLSAK*
Ga0126384_107187252	3300010046	Tropical Forest Soil	MAKPNEQYLKWLSTHPPAEAWKLIIKDATVGSAVDPEKFLKSVSPLPYFKDRMEVCRWLDFVLPKIDRDMSVEEAKILHICCDTLAGSFKKTA*
Ga0126384_108393872	3300010046	Tropical Forest Soil	MAKFNQEHLKWLRTLSTEEAWTQIVKDATADTKVDPENLLQKLSPLPNFKNRTAVRKWLDWVLAKIDLDMSVEEAKVLHICCDALTALFRVSRK*
Ga0126384_110054131	3300010046	Tropical Forest Soil	MDHGGTWRLRMAKFNQKHLKRLRTLSPEEAWNQIVRDATVGTRVHPETFLKNLSPLPNFKNRAEVRRWLDWVLARIDVDMSVEEAKVMRTCCDTLAALFKTTDRR*
Ga0126382_100697853	3300010047	Tropical Forest Soil	MAKFNQKHLKTLRTLSPEEAWNQIVRDATGGTRVHPETFLKNLSPLPNFKNRAEVRRWLDCVLAKIDVDMSVEEAKVLRTCFDTLAALFKTTDRR*
Ga0126382_103788802	3300010047	Tropical Forest Soil	MAKFNQEHLKWLRTLSTEEAWTQIVTDATADTKVDPENLLQKLSPLPNFKNRTAVRKWLNWVLGKIDLDMSVEEAKVLHICCDTLTALFKLSSK*
Ga0126382_118899871	3300010047	Tropical Forest Soil	MAKSNQKHFKWLRTLSSEEAWKQIVQDAAAGMAVDPEKFLQKLSPLPNLEKPPEVRRWLGWVIGKIDNMSVEEAKVLHTCCDTLTALFKLSAK*
Ga0126382_120708351	3300010047	Tropical Forest Soil	MAKPDQKYLKRLRTLSTEEAWKEIVQDATADSAVDPEKFLQQLSPLPNLKNRTAVRKWLDWVLMKVDLDMSVTEAKVLHICCDTLAALFKLSCK*
Ga0126382_121607601	3300010047	Tropical Forest Soil	MAESNQKHLKWLRTLSTEEAWKQIVKDAAAGTTVYPERLLQKLSPLPNLKNRPGVRRWLGWVLAKIDLDMSVEEAKVLHICCDTLEALFQDCLWPDK*
Ga0126373_119097032	3300010048	Tropical Forest Soil	STLSTEEAWRQIVKDATIGTAVDPEKFLQKVSPVPNFKNRTQVRRWLDWVLAKIDLDMTVEEAKVLHICCDTLAALFKVASPDK*
Ga0126370_100248223	3300010358	Tropical Forest Soil	MAKFNQKHLKRLRTLSPEEAWNQIVRDATVGTRVDPETFLKNLSPLPNFKNRAEVRRWLDWVLAKIDVDMSFEEARVLRTCCDTLAALFKTTDRR*
Ga0126370_114044401	3300010358	Tropical Forest Soil	QKQLKWLRTLSTEEAWKQIVKDAAAGTTVDPESFLQRLSPLPNFKNRTQVRRWLDWVLAKIDLDMSVEETKVLHMCCDTLAALFKVASPDE*
Ga0126376_122305651	3300010359	Tropical Forest Soil	MAKSNQKHFKWLRTLSSEETWKQIVQDAAAGMAVDPETFLQKLSPLPNLEKPPEVRRWLGWVIVKIDNMSVEEAKVLHTCCDTLTGLFKLSAK*
Ga0126372_104310473	3300010360	Tropical Forest Soil	MDHGGTWRLRMAKFNQKHLKRLRTLSPEEAWNQIVRDATVGTRVHPETFLKNLSPLPNFKNRAEVRRWLDWVLAKIDVDMSFEEARVLRTCCDTLAALFKTTDRR*
Ga0126372_104730823	3300010360	Tropical Forest Soil	AKFNQKHLKSLRTLSTEEAWKQIVKDATDGTKVDPETFLQKLSPLPNLKDRPAVRRWLGWVLAKIDNMSVEEAKVLHACCDVLTALFKVSRK*
Ga0126372_113430792	3300010360	Tropical Forest Soil	MAKFHHKHLKWLRTLSTDEAWKQIAKDATAGTTVDPETFLQKLSPLPNFKNRTQVRRWLDWVLAKIDPDMTVEEAKVLHICCDTLAALFKVASPDE*
Ga0126378_129390571	3300010361	Tropical Forest Soil	LSTEEAWKQILKDATVGTRVDPEMFLQNVSPLPNLKNRPAVRRWLGWVLAKIDNMSVEEARVMHTCCDMLTALFKLSRK*
Ga0126377_100289704	3300010362	Tropical Forest Soil	MAKFNQKDLKRLRTLSPEEAWNQIVRDATVGTRVDPETFLKNLSPLPNFKNRAEVRRWLDWVLAKIDVDMSVEEAKVLRTCCDTLAALFKTTDRR*
Ga0126377_101510392	3300010362	Tropical Forest Soil	MAKFNQKHLKSLRTLSTEEAWKQIVKDATDGTKVDPETFLQKLSPLPNLKDRPAVRRWLGWVLAKIDNMSVEEAKALHACCDVLTALFKVSRK*
Ga0126377_106038973	3300010362	Tropical Forest Soil	MAKPHHKHLKWLRTISTEEAWKQIVKDATVGTSVDSEAFLQKLSPLPNFRNRTAVRRWLDWVLAKVDLDMSVEEAKVLHICCDTLAALFKLSPK*
Ga0126377_125197771	3300010362	Tropical Forest Soil	MAKSKQKHSKWLRTLSSEEAWKQIVQDAAAGMAVDPEKFLQKLSPLPNLKKPPEVRRWLGWVIVKIDNMSVEEAKVLHTCCDTLTGLFKLSAK*
Ga0126379_120850611	3300010366	Tropical Forest Soil	MAKPHQKHLRSLRTLSTEEAWKQIVKDATADSTIDPEKFLEQLSPLPNLKNRTAVRKWLDWVLMKIDLNMSVAEAKVLHICCDTLTALFNLSHK*
Ga0126381_1029856542	3300010376	Tropical Forest Soil	MAEFNQKHLKWLRTLSTEEAWKQIVKDAAAGTTVDPESFLQRLSPLPNFKNRMAVRKWLDWVLAKIDLDMSVEEAKVLHICCDT
Ga0126383_102507191	3300010398	Tropical Forest Soil	MAKFNPKHLKWLRTLSTEEAWKQIVKDATAGTKVDPETFLQELSPLPNLKNRPAVRRWLGWVLAKIDNMSVEEAKVLHACCDVLTALFKVSCE*
Ga0126383_103325861	3300010398	Tropical Forest Soil	MAKSNQKHFKWLRTLSSEETWKQIVQDAAAGMAVDPETFLQKLSPLPNLEKPPEVRRWLGWVIVKIDNMSVEEAKILHTCCDMLTALFKLSAK*
Ga0126383_109835891	3300010398	Tropical Forest Soil	LSKSKEKYVKWLSTLSTEEAWKRIVTDAADGTRVDPEKLLKSISPLPDFKKPTGVGRWFDLVLAKIDLDMSVEEAKVLHVYCDALTDFFKKTA*
Ga0126383_114615892	3300010398	Tropical Forest Soil	LKWLRTLSTDEAWKQIARDATAGTTVDPETFLQKLSPLPNFKNRTQVRRWLDWVLAKIDPDMTVEEAKVLHICCDTLAALFKVASPDE*
Ga0126383_114737442	3300010398	Tropical Forest Soil	MDKPNQKQLKWLRTLSTEEAWKQIVKDAAAGTTVDPESFLQRLSPLPNFKNRMAVRKWLDWVLAKIDLDMSVEEAKVLHICCDTLAAFFKLSRK*
Ga0126383_117698641	3300010398	Tropical Forest Soil	TLSTEEAWKQIVKDATADSTIDPEKFLEQLSPLPNLKNRTAVRKWLDWVLMKVDLDMSVTEAKVLHICCDTLAALFKLSCK*
Ga0126383_119826982	3300010398	Tropical Forest Soil	MARFNQKQLKWLRTLSTDDAWTQIVKDGTAGTRVDPEMFLQKLSPLPNLKKRPEVRRWLGWVLAKIDNMSAEEAKVLHARCDVLTALFKVSRK
Ga0126383_123869161	3300010398	Tropical Forest Soil	MAKLHNKRLKWLSTTSTDEAWKQIVKDATIGTNVDPEKFLQKLSPLPNFKNRTHVSRWLGWVLVKIDLDMSVEEAKVLHICCDTLAALLKVASPDK*
Ga0126383_125753042	3300010398	Tropical Forest Soil	MAKFNQKHLKWLRTLSTEEAWKQIAKDAAAGTTVDTEKFLQKLSPLPNLKKSPEVRRWLGCVLAKIDNMSAEEAKTLHACCDVLTALFKVSRK*
Ga0137367_111659321	3300012353	Vadose Zone Soil	MAKFNQKHLKRLRTLSPDEAWNQIVRDATVGTRVDPEKFLKNLSPLPNFKNRAAISRWLDWVLAKIDLDMSVEEAKVLHLCCDT
Ga0137366_103384682	3300012354	Vadose Zone Soil	MAKFNQKHLKWLRTLSSEEAWKQIVKDATAGTRVDPEMFLQKLSPLPNFKNPTHVRRWLGWVLVKIDLDMSVEEAKVLHICCDTLTALFKKTGCSDGE*
Ga0126375_100136712	3300012948	Tropical Forest Soil	MAKFNQKHLKRLRTLSPEEAWNQIVRDATVGTRVHPETFLKNLSPLPNFKNRAEVRRWLDWVLAKIDVDMSFEEAKVLRTCCDTLAALFKTTDRR*
Ga0126375_104306212	3300012948	Tropical Forest Soil	MAKFNQEHLKSLRTLSTEEAWKQIVKDATDGTKVDPETFLQKLSPLPNLKNRPAVRRWLGWVLAKIDNMSVEEAKALHACCDVLTALFKVSRK*
Ga0126375_106007332	3300012948	Tropical Forest Soil	MAKPHHKHLKWLRTLSTEEAWKQIVKDATVGTSVDSEAFLQKLSPLPNFRNRTALRRWLDWVLAKVDLDMSVEEAKVLHICCDTLAALFKLSPK*
Ga0126369_102626161	3300012971	Tropical Forest Soil	DMLYQERNEHSRDQGRLRMAEFNQEHLKWLRTLSTEEAWKQIAKDASTNTRVDPEIFLQELSPLPNPKKRSEVRRWLGWVLAKIDNMSFEEAKVLHICCDTLTALFKLSRK*
Ga0126369_108809642	3300012971	Tropical Forest Soil	MARFNQKQLKWLRTLSTEEAWTQIIKDATADTIVDPETLLQKLSPLPNLKSRPAVRSWLGWVLAKIDDMSVEEAKVLHTCCDTLTALFKVSRK*
Ga0126369_109881081	3300012971	Tropical Forest Soil	MAKPNQTHLKWLRTLSTEEAWNRIVKDATAGTRVDPEKFLQELSPLPNLKNRPAVRRWLGWVLAKIDNMGVEEAKVLHACCDVLIALFKVSRK*
Ga0126369_112443893	3300012971	Tropical Forest Soil	MAKFHHKHLKWLRTLSTDEAWKQIARDATAGTTVDPETFLQKLSPLPNFKNRTQVRRWLDWVLAKIDLDMSVEETKVLHMCCDTLAALFKVASPDE*
Ga0132258_116087172	3300015371	Arabidopsis Rhizosphere	LKWLRTLSTEEAWKQIVKDAAAGTTVDPEKLLQKLSPLPNLKNRPGGRRWLGWVLAKIDLDMSVQEAKVLHLCCDTLAALFKLSPK*
Ga0132258_126978901	3300015371	Arabidopsis Rhizosphere	TDEAWKQIAKDATAGTRVDPEMFLQNISPLPNLKNHPAVRRWLGWVLAKIDNMSVEEAKVLHICCDTLTALFKVASPDK*
Ga0132258_128408013	3300015371	Arabidopsis Rhizosphere	MAKFNQKHLKKLRALSPEEAWNQIVGDATVGTRVDPEKFLKKLSPVPNFKNSAEVRRWLDWVLAKIDLDMSVEEAKVLHICCDTLAALFKTTDP
Ga0132256_1012351311	3300015372	Arabidopsis Rhizosphere	MAKLHHKHLKWLSTLSTDEAWKQIVKDATMGTNVDPEKFLQKLSPLPNFKNRTHVRKWLGWVLVKIDLDMSVEEAKVLHICCDTLAALFKVASPDK*
Ga0132257_1043250922	3300015373	Arabidopsis Rhizosphere	MAKFNQKHLKKLRALSPEEAWNQIVGDATVGTRVDPEKFLKKLSPVPNFKNSAEVRRWLDWVLAKIDLDMSIEEAKVLHICCDTLAALFKT
Ga0132255_1024165512	3300015374	Arabidopsis Rhizosphere	MAKHNREHLEWLNNLSTEEAWKQIAKDATAGTAVDPEKFIQKLSPLPNFKNCTAVCKWLDWVLAKIDLDMSVEEAKVLHICCDTLAALFKVASPDK*
Ga0132255_1056535111	3300015374	Arabidopsis Rhizosphere	MAKFNQKHLKKLRALSPEEAWNQIVRDATVGTRVDPEKFLKKLSPLPNFKNRAEVRRWLDWVLAKIDLDMSVEEAKVLHICCDTLAALFKTTDP
Ga0209814_100695262	3300027873	Populus Rhizosphere	MAKHNQKHLRWLRTLSTDEAWKQIAKDATAGTRVDPEMFLQNISPLPNLKNHPAVRRWLGWVLAKIDNMSVEEAKVLHICCDTLTALFKVARPDK
Ga0209465_100344184	3300027874	Tropical Forest Soil	MAKFNQKHLKRLRTLSPEEAWNQIVRDATVGTRVDPETFLKNLSPLPNFKNRAEVRRWLDWVLAKIDVDMSVEEAKVLRTCCDTLAALFKTTDRR
Ga0209481_101308562	3300027880	Populus Rhizosphere	MAKLHHKHLQWLSTLSTDEAWKQIVKDATIGTNVDPEKLLQKLSPLPNFKNRTHVRKWLGWVLVKIDLDMSVEEAKVLHICCDTLAALFKLSPK
Ga0209481_102054281	3300027880	Populus Rhizosphere	MAKHNQKHLRWLRTLSTDEAWKQIARDATAGTRVDPEMFLQNISPLPNLKNHPAVRRWLGWVLAKIDNMSVEEAKVLHICCDTLTALFKVARPDK
Ga0209481_106993921	3300027880	Populus Rhizosphere	MAKFNQKHLKRLRTLSPEEAWNQILRDATTGTRVDPEKFLKNLSPLPNFKNRAEVRRWLDWVLAKIDVDMSVEEAKVLRTCCDTLAALFKTTDRG
Ga0209382_104666743	3300027909	Populus Rhizosphere	MAKFHHKHLKWLRALSTDEAWKQIAKDATIGTTVDPEKLLQKLSPLPNLKNRPGVRRWLGWVLAKIDLDMSIEEAKVLHTCCDTLAALFNVSRK
Ga0209382_108512191	3300027909	Populus Rhizosphere	HTIGSWNRFLIAMHHGGAWRLRMAKFNQKHLKRLRTLSPEEAWNQILRDATTGTRVDPEKFLKNLSPLPNFKNRAEVRRWLDWVLAKIDVDMSVEEAKVLRNCCDTLAALFKTTDRG
Ga0209382_111664341	3300027909	Populus Rhizosphere	MAKPNQTQLKWLRTLSTEEAWKQIVKDAAAGTTVDPEKLLQKLSPLPNLKNRPGVRRWLGWVLAKIDLDMSVQEAKVLHLCCDTLAALFKLSPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098251

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences