Metagenome / Metatranscriptome Family F098257

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098257
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	93 residues
Representative Sequence	VIPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDQLHGDVALFGFLTGLSDAPCGTPVGNETQEAACARFALANDIREELA
Number of Associated Samples	88
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	12.50 %
% of genes near scaffold ends (potentially truncated)	98.08 %
% of genes from short scaffolds (< 2000 bps)	90.38 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.154 % of family members)
Environment Ontology (ENVO)	Unclassified (36.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (34.615 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 56.82% β-sheet: 2.27% Coil/Unstructured: 40.91%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03461	TRCF	75.96
PF00639	Rotamase	0.96
PF06739	SBBP	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1197	Transcription-repair coupling factor (superfamily II helicase)	Transcription [K]	151.92
COG0760	Peptidyl-prolyl isomerase, parvulin family	Posttranslational modification, protein turnover, chaperones [O]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	93.27 %
Unclassified	root	N/A	2.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	93.27 %
Unclassified	root	N/A	2.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	70.19 %
Unclassified	root	N/A	2.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	68.27 %
Unclassified	root	N/A	2.88 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.92 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	68.27 %
Unclassified	root	N/A	2.88 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.92 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	68.27 %
Unclassified	root	N/A	2.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.92 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	68.27 %
Unclassified	root	N/A	2.88 %
Streptomyces afghaniensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces afghaniensis	1.92 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	68.27 %
Unclassified	root	N/A	2.88 %
Streptomyces afghaniensis 772	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces afghaniensis → Streptomyces afghaniensis 772	1.92 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_11775981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300001431\|F14TB_100091925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300005341\|Ga0070691_10293970	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005347\|Ga0070668_101149279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300005459\|Ga0068867_101044108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300005545\|Ga0070695_100063253	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2405	Open in IMG/M
3300005546\|Ga0070696_101093031	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005577\|Ga0068857_101883645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300005615\|Ga0070702_100996963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300005842\|Ga0068858_102507155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300005843\|Ga0068860_100916533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	893	Open in IMG/M
3300006577\|Ga0074050_12086406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300006581\|Ga0074048_13466362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300006853\|Ga0075420_100587604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	961	Open in IMG/M
3300006880\|Ga0075429_101062000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300009146\|Ga0105091_10056151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1756	Open in IMG/M
3300009157\|Ga0105092_10234170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1030	Open in IMG/M
3300009168\|Ga0105104_10063749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1995	Open in IMG/M
3300009168\|Ga0105104_10735376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300009553\|Ga0105249_10046889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3935	Open in IMG/M
3300009553\|Ga0105249_10208859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1915	Open in IMG/M
3300009817\|Ga0105062_1074764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300009817\|Ga0105062_1140545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300009818\|Ga0105072_1004278	Not Available	2362	Open in IMG/M
3300009818\|Ga0105072_1115693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300009818\|Ga0105072_1125871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300009822\|Ga0105066_1120474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300009822\|Ga0105066_1168480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300009836\|Ga0105068_1075783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300009837\|Ga0105058_1111916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300009837\|Ga0105058_1170391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300009840\|Ga0126313_11488905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300010041\|Ga0126312_10337142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1067	Open in IMG/M
3300010399\|Ga0134127_11314451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300010403\|Ga0134123_11033259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300013306\|Ga0163162_11487463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300014745\|Ga0157377_10174878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1345	Open in IMG/M
3300014745\|Ga0157377_11471015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300017997\|Ga0184610_1213054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300018028\|Ga0184608_10074374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1382	Open in IMG/M
3300018031\|Ga0184634_10296683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300018052\|Ga0184638_1323439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300018053\|Ga0184626_10241094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300018054\|Ga0184621_10124229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	923	Open in IMG/M
3300018067\|Ga0184611_1118025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300018071\|Ga0184618_10128884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1018	Open in IMG/M
3300018072\|Ga0184635_10018354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2538	Open in IMG/M
3300018072\|Ga0184635_10280754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300018075\|Ga0184632_10193917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	895	Open in IMG/M
3300018075\|Ga0184632_10287255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300018081\|Ga0184625_10460500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300018084\|Ga0184629_10448499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300018466\|Ga0190268_10217334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1062	Open in IMG/M
3300018469\|Ga0190270_10563804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1101	Open in IMG/M
3300018469\|Ga0190270_11175135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	804	Open in IMG/M
3300018469\|Ga0190270_12782352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300018476\|Ga0190274_11489687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	768	Open in IMG/M
3300019767\|Ga0190267_10212026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	919	Open in IMG/M
3300020005\|Ga0193697_1067302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	881	Open in IMG/M
3300020009\|Ga0193740_1069294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300021073\|Ga0210378_10248097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300021073\|Ga0210378_10258507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300022534\|Ga0224452_1109492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300022694\|Ga0222623_10029400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2079	Open in IMG/M
3300022694\|Ga0222623_10207141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300025917\|Ga0207660_11023643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300025926\|Ga0207659_10083464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces afghaniensis → Streptomyces afghaniensis 772	2368	Open in IMG/M
3300025961\|Ga0207712_10132921	All Organisms → cellular organisms → Bacteria	1899	Open in IMG/M
3300026075\|Ga0207708_10895768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	768	Open in IMG/M
3300026088\|Ga0207641_10061041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces afghaniensis → Streptomyces afghaniensis 772	3214	Open in IMG/M
3300026116\|Ga0207674_11495029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300026933\|Ga0207578_1015888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300027006\|Ga0209896_1025258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300027324\|Ga0209845_1042551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300027379\|Ga0209842_1011178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1773	Open in IMG/M
3300027454\|Ga0207623_101716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300027577\|Ga0209874_1085836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300027717\|Ga0209998_10073856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300027880\|Ga0209481_10428503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300027954\|Ga0209859_1004940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2912	Open in IMG/M
3300028589\|Ga0247818_11152394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300028596\|Ga0247821_10613204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300028708\|Ga0307295_10250813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300028717\|Ga0307298_10025871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1542	Open in IMG/M
3300028720\|Ga0307317_10055097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1279	Open in IMG/M
3300028722\|Ga0307319_10247672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300028755\|Ga0307316_10017726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2252	Open in IMG/M
3300028791\|Ga0307290_10092565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1101	Open in IMG/M
3300028791\|Ga0307290_10106844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1021	Open in IMG/M
3300028819\|Ga0307296_10483639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300028824\|Ga0307310_10008006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4024	Open in IMG/M
3300028875\|Ga0307289_10178246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	874	Open in IMG/M
3300028878\|Ga0307278_10426889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300028880\|Ga0307300_10218784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300030336\|Ga0247826_10840357	Not Available	721	Open in IMG/M
3300031199\|Ga0307495_10013664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1250	Open in IMG/M
3300031547\|Ga0310887_11144497	Not Available	501	Open in IMG/M
3300031847\|Ga0310907_10495194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300031965\|Ga0326597_11127538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300032075\|Ga0310890_10727908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300034176\|Ga0364931_0103448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300034354\|Ga0364943_0164314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	805	Open in IMG/M
3300034354\|Ga0364943_0410462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300034690\|Ga0364923_0031947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1212	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.69%
Host-Associated	Host-Associated	17.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.58%
Aquatic	Environmental → Aquatic	22.12%
Plants	Host-Associated → Plants	17.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.73%
Sediment	Environmental → Aquatic → Sediment	16.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.69%
Freshwater	Environmental → Aquatic → Freshwater	5.77%
Floodplain	Environmental → Terrestrial → Floodplain	3.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	16.35%
Sand	Environmental → Terrestrial → Soil → Sand	14.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.69%
Loam	Environmental → Terrestrial → Soil → Loam	6.73%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	16.35%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	14.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.69%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.77%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.15%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	14.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	13.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.88%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020009	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026933	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10K4-12 (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027454	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G09K2-12 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_117759812	3300000890	Soil	IPLPRPVRVLAILCVVVLFAACANDPSSAATVGEDGEISIDQLHGDVALFGFLTGLSDAPCGTPVGNETQEAACARFAL
F14TB_1000919251	3300001431	Soil	VIPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDQLHGDVALFGFLTGLSDAPCGTPVGNETQEAACARFALA
Ga0070691_102939701	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VIPVPRPLRVLATLCVVVLFAACSNDPSSAATVGETGEISIDQLHTDVALFGFLTKLSGGTCGTPVGN
Ga0070668_1011492791	3300005347	Switchgrass Rhizosphere	VIPLPRPVRALAIVCVLALFAACANDPSSAATVGETGQISIDQLHTDVALFGFLTGLSGAPCGTPVGNETQ
Ga0068867_1010441082	3300005459	Miscanthus Rhizosphere	VIPLPRPVRALAIVCVLALFAACANDPSSAATVGETGQISIDQLHTDVALFGFLTGLSGAPCGTPVGNETQDAACARFALANDIREELAKAYAIENDLEVEPADVKDALTQLEQGLGGAD
Ga0070695_1000632532	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VIPLPRPVRALAIVCVLALFAACANDPSSAATVGETGEISIDQLHGDVALYGFLAKLSNVPCGTPVGNETQESACARFTLANDIHEEVAKAYASENDVKADP
Ga0070696_1010930311	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VIPVPRPLRVLATLCVVVLFAACSNDPSSAATVGETGEISIDQLHTDVALFGFLTKLSGGTCGTPVGNETQES
Ga0068857_1018836452	3300005577	Corn Rhizosphere	VIPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDQLHGDVALFGFLTGLSDAPCGTPVGNETQ
Ga0070702_1009969632	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VIPLPRPVRALAIVCVVVLFAACANDPSSAATVGETGEISIDQLHGDVALFGFLTGLSGAPCGTPVGNETQ
Ga0068858_1025071552	3300005842	Switchgrass Rhizosphere	VIPVPRLLRVLATLCVVVLFAACSNDPSSAATVGETGEISIDQLHGDVALYGFLAKLSNVPCGTPVGNETQESACARFTLANDIHEEVAKAYASENDVKADPAAVTDALSRLESNLGGAD
Ga0068860_1009165332	3300005843	Switchgrass Rhizosphere	VIPLPRPVRALAIVCVLALFAACANDPSSAATVGETGEISIDQLHGDVALFGFLTGLSGAPCGTPVGNETQDAACARFALANDIREELAK
Ga0074050_120864062	3300006577	Soil	VIPLPRPVRVLAILCVVVVFTACANDPSSAATVGGGEISIDQLHADVALFGFLTGLSGAPCGTPV
Ga0074048_134663622	3300006581	Soil	VIPLPRSVRVLAILCVVVLFTACANDPSSAATVGDGGITIDQLHTDVALFGFLTGLSGAPCGTPVGNETQEAACARF
Ga0075420_1005876042	3300006853	Populus Rhizosphere	VIPLPRPVRALAIVCVLALFAACANDPSSAATVGETGEISIDQLHTDVALFGFLTGLSGAPCGTPVGNETQDAACARFALANDIREELAKAYATE
Ga0075429_1010620002	3300006880	Populus Rhizosphere	VIPLPRPVRALAIVCVLALFAACANDPSSAATVGETGEISIDQLHTDVALFGFLTGLSGAPCGTPVGNETQDAACARFALANDIREELAKSYAMENDLE
Ga0105091_100561512	3300009146	Freshwater Sediment	VIPLPRRAGLLAFVSVVVLLAGCANDPSSAATVGDDEISIDQLHADVVLFGFLTTLSGAPCGTPVEGESQDAACARFTLANDIREELAKSYAADNDVTVDPAEVTDALTQLEEGLGGA
Ga0105092_102341701	3300009157	Freshwater Sediment	VIPHPRRAGLVAFVSVVVLFAGCANDPSSAATVGDDEISIDQLNADVALFGFLTTLSGAPCGTPVEGESQDAACARFTLANDIREELAKTYAADNDVTVDPAEVTDALTQLE
Ga0105104_100637492	3300009168	Freshwater Sediment	VIPLPRRAGLLAFVSVVVLLAGCANDPSSAATVGDDEISIAQLHADVELFGFLTTLSGAPCGTSVEGESQDAACARFTLAYDIREELAKTYAADNDVTVDPAEVSDAL
Ga0105104_107353762	3300009168	Freshwater Sediment	VIPPSRRAGLLAFVSLVVLFAGCANDPSSAATVGDDEISIDQLHADVALFGFLTTLSGAPCGTPVEGESQDAACARFTLANDIREELAKTYAADNDVTV
Ga0105249_100468891	3300009553	Switchgrass Rhizosphere	VIPLPRPVRALAIVCVVVLFAACANDPSSAATVGETGEISIDQLHGDVALFGFLTGLSGAPCGTPVGNETQDAACARFALANDIHEEVAKAYASENDVKADPAAVTDAVSRLESNLG
Ga0105249_102088593	3300009553	Switchgrass Rhizosphere	PVRALAIVCVVVLFAACANDPSSAATVGDGEISIDQLHGDVALFGFLTGLSDAPCGTPVGNETQEAACARFALANDIREELA*
Ga0105062_10747642	3300009817	Groundwater Sand	MPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDQLHGDVALFGFLTGLSGAPCGTPVGNETQEAACARFALANDIREELAKAYATENDLKVDA
Ga0105062_11405452	3300009817	Groundwater Sand	VIPPPRRAGLLASLSVVVVLFAACANDPSAAATVGENEISIEQLDADVALFGFLTALSGAPCGTPVEGESQDAACARFTLSNDIREELAKTYAADNDVTVGPAEVTD
Ga0105072_10042781	3300009818	Groundwater Sand	VAPPRPSRILVAVAVIAFSFAACANDPSSAATVGDGEISIERLHEDVALFGFLTGLSGAPCGTPVGNETQDAA
Ga0105072_11156932	3300009818	Groundwater Sand	VLATLCVVVLFAACANDPSSAATVGDGEISIDQLHGDVALFGFLTGLSDAPCGTPVGNETQEAACARFALANDIREELAKAYATEND
Ga0105072_11258711	3300009818	Groundwater Sand	VIPPPRRAGLLASLSVVVVLFAACTNDPSAAATVGEYEISIEQLDADVALFGFLTALSGAPCGTPVEGESQDAACARFSLSNDIREELAKTYAADNDVTVGPAEVTDAITQLEEG
Ga0105066_11204742	3300009822	Groundwater Sand	VIPPSRRAGLLAFVSVVVLFAGCANDPSSAATVGDDEISVDQLHADVALFGFLTTLSGAPCGTPLEGESQDAACARFTLANDIREELAKTYAA
Ga0105066_11684802	3300009822	Groundwater Sand	VVAVIALAACANDPSSAATVGETGEISIDQLHADVALFGFLTGLSGAPCGTPVGNETQEAACARFALANDIREELAKAYAIENDLEVDPADVKG
Ga0105068_10757832	3300009836	Groundwater Sand	VIPPSRRAGLLAFASVVVLFAGCANDPSSAATVGDDEISIDQLHADVALFGFLTTLSGAPCGTPLEGESQDAACARFTLANDIREELAKTYAADNDVTVDPAEVTD
Ga0105058_11119161	3300009837	Groundwater Sand	VIPPPRRAGLLASLSVVVVLFAACANDPSAAATVGENEISIEQLDADVTLFGFLTALSGAPCGTPVEGESQDAACARFSLSNDIREELAKTYAADNDVTVGPAEVTDAITQLEEGLGGAEALRSQLSDAG
Ga0105058_11703911	3300009837	Groundwater Sand	VIPPSRRAGLLAFVSVVVLFAGCANDPSSAATVGDDEISIDQLHADVALFGFLTTLSGAPCGTPVEGESQDAACARFTLANDIREELAKSYAADN
Ga0126313_114889051	3300009840	Serpentine Soil	MLATLSIVAVLLAACSNDPSSAATVGEGEISIDQVHADVALFGFLTALSGAPCGTPVGAESQESACARFTLANDIREELAKAYATQHDLQVDRADVTDALTQLEQGL
Ga0126312_103371422	3300010041	Serpentine Soil	VLAILWVVVLFAACANDPSSAATVGETAEISIDQLNADVALFGFLTGLSGAPCGTPVGNEPQDAACARFALANDIREE
Ga0134127_113144511	3300010399	Terrestrial Soil	VLATLFVVVLFAACANDPSSAATVGETGEISIDQLHADVALFGFLAGLTQGASCGTPVGNETQESACARFALANDIREELAKSY
Ga0134123_110332591	3300010403	Terrestrial Soil	VLATLCVVVLFAACSNDPSSAATVGETGEISIDQLHTDVALFGFLTKLSGGTCGTPVGNETQESACARFSLANDIREELAKSYASENDVKGDPATVTDALTRLEDNLGGADALTAQ
Ga0163162_114874632	3300013306	Switchgrass Rhizosphere	VIPLPRPVRALAIVCVVALFAACANDPSSAATVGETGEISIDQLHGDVALFGFLTGLSDAPCGTPVGNETQEAACARFALANDIREELAKDYATENDLKV
Ga0157377_101748782	3300014745	Miscanthus Rhizosphere	VIPLPRPVRALAIVCVLALFAACANDPSSAATVGETGEISIDQLHTDVALFGFLTGLSGAPCGTPVGNETQ
Ga0157377_114710151	3300014745	Miscanthus Rhizosphere	VLATLCVVVLFAACSNDPSSAATVGETGEISIDQLHGDVALYGFLAKLSNVPCGTPVGNETQESACARFTLANDIHEEVAKAYASENDVKADPAAVTDAVSRLESN
Ga0184610_12130541	3300017997	Groundwater Sediment	VIPPPRRAGLLASLSVVVVLFAACTNDPSAAATVGENEISIEQLDADVALFGFLTALSGAPCGTPVEGESQDAACAR
Ga0184608_100743742	3300018028	Groundwater Sediment	VIPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDQLHGDVALFGFLTGLSGAPCGTPVGNETQEAACTRFALANDIREELAKAYATENDLKVDAADVT
Ga0184634_102966832	3300018031	Groundwater Sediment	VIPLPRAVRALAIVCVLAVFAACANDPSSAATVGEGEISIDQLHGDVALFGFLTGLSGAPCGTPVGNETQDAACARFALA
Ga0184638_13234392	3300018052	Groundwater Sediment	VIPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDELHGDVALFGFLTGLSGAPCGTPVGNETQEAACTRF
Ga0184626_102410941	3300018053	Groundwater Sediment	VIPPPRRAGLLASLSVVVVLFAACANDPSAAATVGENEISIEQLDADVALFGFLTALSGAPCGTPVEGESQDAACARFTLSNDIREELAKTYAADNDVTVGPAEV
Ga0184621_101242292	3300018054	Groundwater Sediment	VIPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDELHGDVALFGFLTGLSGAPCGTPVGNETQEAACTRFALANDIREELAKAYATENDLK
Ga0184611_11180252	3300018067	Groundwater Sediment	VIPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDELHGDVALFGFLTGLSGAPCGTPVGNETQEAACTRFALANDIREELAKAYATENDLKVDAADVTHALTQLE
Ga0184618_101288841	3300018071	Groundwater Sediment	VTPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDQLHGDVALFGFLTGLSGAPCGT
Ga0184635_100183542	3300018072	Groundwater Sediment	VIPLPRPVRVLAILCVVVLFAACANDPSSAATVGEEGEISIDQLHGDVALFGFLTGLSGVPCGTPVGNETQEAACARFALANDIREELAKAYAIENDLEV
Ga0184635_102807542	3300018072	Groundwater Sediment	VIPPPRRAGLLASLSVVVVLFAACANDPSAAATVGENEISIEQLDADVALFGFLTALSGAPCGTPVEGESQDAACARFTLSNDIREELAKTYAADNDVTVGPAEVTDAITQLEEGL
Ga0184632_101939171	3300018075	Groundwater Sediment	VIPPPRRAGLLASLSVVVVLFAACANDPSAAATVGENEISIEQLDADVALFGFLTALSGAPCGTPVEGESQDAACARFTLSNDIREELAKTYAADNDVTVGPAEVT
Ga0184632_102872552	3300018075	Groundwater Sediment	VIPASRAVRVLATLSIVVLFAACANDPSSAATVGDGEISIEQLHADVALYGFLSALSGAPCGTPVGNETQESACARFTLANDIREELAKTYATEND
Ga0184625_104605002	3300018081	Groundwater Sediment	VIPVPRPLRVLATLCVVVLFAACSNDPSSAATVGETGEISIDQLHADIALFGFLTTLSGGTCGTPVGNETQESACARFALANDIHEELAKSYATENRVKVDSAAF
Ga0184629_104484992	3300018084	Groundwater Sediment	VVIPSPRRAGLLASLSVVVVLFAACANDPSAAATVGENEISVEQLDADVALFGFLTALSGAPCGTPVEGESQDAACARFTLSNDIREELAKTYAADNDVTVGPAEVTDAITRLEE
Ga0190268_102173342	3300018466	Soil	VIPLPRPVRVLAILSVLVLFAACANDPSSAATVGEEGEISIDQLHGDVALFGFLTGLSGVPCGTPVGNET
Ga0190270_105638042	3300018469	Soil	VIPPPRRAGLLASLSVVVVLFAGCANDPSSAATVGDDEISIDQLHADVALFGFLTTLSGAPCGTPVEGESQDAACARFTLANDIREELA
Ga0190270_111751351	3300018469	Soil	VIPVPRLLRVLATLCVVVLFAACANDPSSAATVGETGEISIDQLHADVALYGFLAKLNSVPCGTPVGIETQESACARFALANDIQEEVAKAYASENDVKV
Ga0190270_127823522	3300018469	Soil	VIPLPRRAGLLAFVSVVVLLAGCANDPSSAATVGDDEISIAQLHADVELFGFLTTLSGAPCGTPVEGESQDAACARFTLANDIREELA
Ga0190274_114896872	3300018476	Soil	VIPLPRRADLLAFVSVVVLLAGCANDPSSAATVGDDEISIAQLHADVELFGFLTTLSGAPCGTPVEGESQDAACARFTLANDIREELAKTYAADNDVTVDPAEVTDA
Ga0190267_102120261	3300019767	Soil	VIPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDQLHGDVALFGFLTGLSDAPCGTPVGNETQEAACARFALANDIREELAKDYATENDLKVDAADVTDA
Ga0193697_10673021	3300020005	Soil	VIPVPRLLRVLATLCVVVLFAACSNDPSSAATVGETGEISIDQLHADVALFGFLTALSGGTCGTPVGNETQESACARFALANDIREELAKSYA
Ga0193740_10692941	3300020009	Soil	VIPSARRAGLLAFVSVVAVLFAGCANDPSSAATVGDDEISIDQLHADVALFGFLTTLSGAPCGTPVEGESQDAACARFTLANDIREELAKTYAADNDVTVDPAE
Ga0210378_102480972	3300021073	Groundwater Sediment	VIPPPRRAGLLASLSVVVVLFAACANDPSAAATVGENEISIEQLDADVALFGFLTALSGAPCGTPVEGESQDAACARFTLSNDIREELAKTYAADNDVTVGPAEVTDAITQLEEGLGGAEAL
Ga0210378_102585071	3300021073	Groundwater Sediment	VIPPPRRAGLLAFVSVVVVLFAACANDPSSAATVGENEISIEQLDADVALFGFLTTLSGAPCGTPVEGESQDAACARFTLANDIREELAKTYAADNDVTVDPAEVTDAITQLEE
Ga0224452_11094921	3300022534	Groundwater Sediment	VIPLPRPVRALAIVCVVALFAACANDPSSAATVGEGEISIDQLHGDVALFGFLTGLSGAPCGTPVG
Ga0222623_100294002	3300022694	Groundwater Sediment	VFLSVVVVLFAACANDPSAAATVGENEISIEQLDADVALFGFLTALSGAPCGTPMEGESQDAACARFTLSNDIREELAKTYAADNDVT
Ga0222623_102071412	3300022694	Groundwater Sediment	VIPPPRRAGLLASLSVVVVLFAACTNDPSAAATVGENEISIEQLDADVALFGFLTALSGAPCGTPVEGESQDAACARFTLSNDIREELAKTYAADNDVTVGPAEVTDS
Ga0207660_110236432	3300025917	Corn Rhizosphere	VISVPRFLRVLATLAVVVLFAACANDPSSAATVGETGEISIDQLHGDVALFGFLTGLSGAPCGTPVGNETQDAACARFALANDIREE
Ga0207659_100834642	3300025926	Miscanthus Rhizosphere	VIPVPRLLRVLATLCVVVLFAACSNDPSSAATVGETGEISIDQLHGDVALYGFLAKLSNVPCGTPVGNETQESACARFTLANDIHEEVAKAYASENDVKAD
Ga0207712_101329212	3300025961	Switchgrass Rhizosphere	VIPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDQLHGDVALFGFLTGLSDAPCGTPVGNETQEAACARFALANDIREELA
Ga0207708_108957681	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VIPVPRPLRVLATLFVVVLFAACANDPSSAATVGETGEISIDQLHADVALFGFLAGLTQGASCGTPVGNETQESACARFALAN
Ga0207641_100610411	3300026088	Switchgrass Rhizosphere	VIPVPRLLRVLATLCVVVLFAACSNDPSSAATVGETGEISIDQLHGDVALYGFLAKLSNVPCGTPVGNETQESACARFTLANDIHEEVAKAYA
Ga0207674_114950292	3300026116	Corn Rhizosphere	VIPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDQLHGDVALFGFLTGLSDAPCGTPVGNETQEAACARFALANDIRE
Ga0207578_10158882	3300026933	Soil	VIPLPRPVCVLAILCVVVLFAACANDPSSAATVGDGEISIDQLHGDVALFGFLMPLLGNTCGTP
Ga0209896_10252581	3300027006	Groundwater Sand	VAPPRPSRILVAVAVIAFSFAACANDPSSAATVGDGEISIERLHEDVALFGFLTGLSGAPCGTPVGNETQDAACARFALANDIREELAKAYATEHDLKVDPA
Ga0209845_10425511	3300027324	Groundwater Sand	VIPSSRRAGLLAFVSFVVLFAGCANDPSSAATVGDDEISVDQLHADVALFGFLTTLSGAPCGTPLEGESQDAACARFTLANDIREELAKTYAADNDVTVDPAEVTDAITQ
Ga0209842_10111781	3300027379	Groundwater Sand	MMPLPRPVRVLAILCVAVLFTACANDPSSAATVGDGEISIDQLHADVALFGFLTGLSGAPCGTPVGNETQEAACARFALANDIREELAK
Ga0207623_1017161	3300027454	Soil	VIPVPRLLRVLATLCVVVLFAACSNDPSSAATVGETGEISIDQLHGDVALYGFLAKLSNVPCGTPVGNETQESACARFTLANDIHEEVAKAYASENDVKADPAAVTDAL
Ga0209874_10858362	3300027577	Groundwater Sand	VVPPRPLGILVVVGVIALSLAACANDPSSAASVGETGEISIEQLHADVALFGFLTGLSGAPCGTPVGNETQDA
Ga0209998_100738562	3300027717	Arabidopsis Thaliana Rhizosphere	VIPLSRPLRALAIVCVVVLFAACASDPSSAATVGETGEISIDQLHGDVALFGFLTGLSDAPCGTPVGNETQEAACTRFALANDIREELAKVSRAQAKTLAAAR
Ga0209481_104285031	3300027880	Populus Rhizosphere	VIPLPRPVRALAIVCVLALFAACANDPSSAATVGETGEISIDQLHTDVALFGFLTGLSGAPCGTPVGNETQDAACARFALANDIREELAKAYATENDLEVDP
Ga0209859_10049402	3300027954	Groundwater Sand	VIPPSRRAGLLAFVSVVVLFAGCANDPSSAATVGDDEISVDQLHADVALFGFLTTLSGAPCGTPLEGESQDAACARFTLANDIREELAKTYAADNDVTVDPAE
Ga0247818_111523941	3300028589	Soil	VTPLPRPVRALAIVCVVALFAACANDPSSAATVGEGEISIDQLHGDVALFGFLTGLSGAPCGTPVGNETQDAASAN
Ga0247821_106132042	3300028596	Soil	VIPLPRPVRALAIVCVLALFAACANDPSSAATVGETGEISIDQLHTDVALFGFLTGLSGAPCGTPVGNETQDAACARFALANDIREELAKSYATENDLEVDPTDVKGALTQLE
Ga0307295_102508132	3300028708	Soil	VIPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDQLHGDVALFGFLTGLSGAPCGTPVGNET
Ga0307298_100258711	3300028717	Soil	VIPFPRPIRVLAIVCVVVLFTACANDPSSAATVGDGEISIDQLHGDVALFGFLTGLSGAPCGT
Ga0307317_100550971	3300028720	Soil	VIPLPRPVRALAIVCVVALLAACANDPSSAATVGEGEISIDQLHGDVALFGFLTGLSGAPCG
Ga0307319_102476722	3300028722	Soil	VIPVPRLLRVLATLCVVVLFAACSNDPSSAATVGETGEISIDQLHADVALFGFLTALSGGTCGTPVGNETQESA
Ga0307316_100177263	3300028755	Soil	VIPFPRPIRVLAIVCVVVLFTACANDPSSAATVGEEGEISIDQLHGDVALFGFLTSLSGVPCGTPVENETQEAACARFALANDIREQLAK
Ga0307290_100925652	3300028791	Soil	VIPLPRPVRALAIVCVVALFAACANDPSSAATVGEGEISIDQLHGDVALFGFLTGLSGAPCGTPVGNETQDAACARFALANDIREELAKSYAIKNDLEVEA
Ga0307290_101068441	3300028791	Soil	VIPPPRRAGLLASVSVVVVLFAACANDPSAAATVGENEISIEQLDADVALFGFLTALSGAPCGTPVEGESQDAACARFTLSNDIREELAKTYAADND
Ga0307296_104836392	3300028819	Soil	VIPLPRPVRALAIVCVVALLAACANDPSSAATVGEGEISIDQLHGDVALFGFLTGLSGAPCGTPVGNETQDAACARF
Ga0307310_100080063	3300028824	Soil	VIPPPCRAGLLASLSVVVVLFAACTNDPSAAATVGENEISIEQLDADVALFGFLTALSGAPCGTPVEGESQDAACARFTLSNDIREELAKTYAADNDVTVGPAEVTDAITQLEEGLGGAEALRS
Ga0307289_101782462	3300028875	Soil	VIPLPRPVRALAIVCVVALFAACANDPSSAATVGEGEISIDQLHGDVALFGFLTGLSGAPCG
Ga0307278_104268891	3300028878	Soil	VIPLPRPVRVLAILCVVVLFAACANDPSSAATVGDGEISIDELHGDVALFGFLTGLSGAPCGTPVGNETQEAACTRFALANDIREELAKAYATEND
Ga0307300_102187842	3300028880	Soil	VIPLPRPVRALAIVCVVALFAACANDPSSAATVGEGEISIDQLHGDVALFGFLTSLSGVPCGTPVENETQEAACARFALANDIREELAKAYAIENDLEVEAADVKDALTQLEQGLGGA
Ga0247826_108403572	3300030336	Soil	VIPVPRLLRVLATLCVVVLFAACSNDPSSAATVGEAGEISIDQLHADVALFGFLAKINSVPCGTPVGNETQESACARFALGRDIREEVAKAYASENDVKVDPAAVTD
Ga0307495_100136642	3300031199	Soil	VIPVPRLLRVLATLCVVVLFAACSNDPSSAATVGETGEISIDQLHADVALYGFLAKLSSVPCGTPVGNETQESACARFALANDIHEEVAKAY
Ga0310887_111444971	3300031547	Soil	VIPVPRPLRVLATLCVVVLFAACSNDPSSAATVGETGEISIDQLHTDVALFGFLTKLSGGTCGTPVGNETQESACARFSLANDI
Ga0310907_104951942	3300031847	Soil	VIPVPRSLRVLATLCVVVLFAACANDPSSAATVGETGEISIDQLHADVALFGFLTKLSGATCGTPVGNETQESACARFALANDIHEELAKAYASENDVKVDPAAVKDALGRLEQSL
Ga0326597_111275382	3300031965	Soil	VIPLPRPVRVLAILWVVVLFTACANDPSSAATVGETGEISIDQLHADVALFGFLTGLSGAPCGTPVGNETQDAACARFALANDIREELAKTYATEHDLKVDPADVTDALTQLEQGLGGADALR
Ga0310890_107279082	3300032075	Soil	VIPAPRFLRVLATLCVVVLFAACANDPSSAATVGETGEISIDQLHADVALFGFLTALSGAPCGTPVGNETQESACA
Ga0364931_0103448_1_297	3300034176	Sediment	VLAFLSVVAVLFAACSNDPAAAATVGENDISIDQLDADVALFGFLTALSGAPCGTPIEGESQDAACARFTLANDIREELAKTYAADNDVTVDPAEVTDA
Ga0364943_0164314_1_237	3300034354	Sediment	VLAFLSVVAVLFAACSNDPSAAATVGENDISIDQLDADVALFGFLTALSGAPCGTPIEGESQDAACARFTLANDIREEL
Ga0364943_0410462_298_522	3300034354	Sediment	VIPPPRRAGLLAFVSVVVLFAGCANDPSSAATVGDDEISIAQLHADVALFGFLTTLSGAPCGTPVEGESQDAACA
Ga0364923_0031947_1_273	3300034690	Sediment	VIPPPRRAGLLAFVSVVVLFAGCANDPSSAATVGDDEISIAQLHADVALFGFLTTLSGAPCGTPVEGESEDAACARFTLANDIREELAKTY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098257

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences