Metagenome / Metatranscriptome Family F098295

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098295
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	87 residues
Representative Sequence	VHHFLHLRSRAAGLFAVALLGGGVALGGAAALGKLGERTTIIRQEAVPSSSAPVAFAQGKRMSINEIYRASAPAVVHIETTSRV
Number of Associated Samples	90
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.16 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.538 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.231 % of family members)
Environment Ontology (ENVO)	Unclassified (28.846 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.731 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.61% β-sheet: 0.00% Coil/Unstructured: 63.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02082	Rrf2	7.69
PF11387	DUF2795	3.85
PF03916	NrfD	2.88
PF00361	Proton_antipo_M	2.88
PF12857	TOBE_3	1.92
PF00330	Aconitase	1.92
PF04879	Molybdop_Fe4S4	1.92
PF04066	MrpF_PhaF	0.96
PF14589	NrfD_2	0.96
PF00528	BPD_transp_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	7.69
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	7.69
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	7.69
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	7.69
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	7.69
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	7.69
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	7.69
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	7.69
COG2212	Multisubunit Na+/H+ antiporter, MnhF subunit	Inorganic ion transport and metabolism [P]	0.96

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.54 %
Unclassified	root	N/A	13.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.54 %
Unclassified	root	N/A	13.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.54 %
Unclassified	root	N/A	13.46 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.19 %
Unclassified	root	N/A	13.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70.19 %
Unclassified	root	N/A	13.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	52.88 %
Unclassified	root	N/A	13.46 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.92 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	51.92 %
Unclassified	root	N/A	13.46 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1.92 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.92 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.92 %
Unclassified	root	N/A	13.46 %
Maritimibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter	1.92 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.92 %
Unclassified	root	N/A	13.46 %
unclassified Maritimibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → unclassified Maritimibacter	1.92 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.92 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.92 %
Unclassified	root	N/A	13.46 %
Maritimibacter sp. HL-12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → unclassified Maritimibacter → Maritimibacter sp. HL-12	1.92 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.92 %
Streptomyces viridochromogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces viridochromogenes	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001334\|A2165W6_1018806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300001361\|A30PFW6_1052843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1258	Open in IMG/M
3300001536\|A1565W1_11355505	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300003324\|soilH2_10273426	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300004114\|Ga0062593_103550996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300004156\|Ga0062589_102722904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300004157\|Ga0062590_100296700	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300005178\|Ga0066688_10501937	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300005181\|Ga0066678_10960704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → unclassified Maritimibacter → Maritimibacter sp. HL-12	556	Open in IMG/M
3300005186\|Ga0066676_11163956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → unclassified Maritimibacter → Maritimibacter sp. HL-12	506	Open in IMG/M
3300005329\|Ga0070683_101001531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300005339\|Ga0070660_100880173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300005344\|Ga0070661_101859853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces viridochromogenes	511	Open in IMG/M
3300005439\|Ga0070711_101278932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300005450\|Ga0066682_10328542	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300005458\|Ga0070681_11697298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300005466\|Ga0070685_10560183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	817	Open in IMG/M
3300005466\|Ga0070685_10956941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300005471\|Ga0070698_100359125	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300005518\|Ga0070699_101930685	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005526\|Ga0073909_10532955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300005549\|Ga0070704_101345136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300005552\|Ga0066701_10713169	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005557\|Ga0066704_10098176	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300005561\|Ga0066699_10594161	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300005843\|Ga0068860_102163488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300005985\|Ga0081539_10236259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300006028\|Ga0070717_10649029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300006046\|Ga0066652_100290904	Not Available	1447	Open in IMG/M
3300006046\|Ga0066652_101836687	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300006797\|Ga0066659_11071998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300006854\|Ga0075425_100162783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2560	Open in IMG/M
3300006871\|Ga0075434_100621536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1099	Open in IMG/M
3300007076\|Ga0075435_101501604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300009012\|Ga0066710_100409753	All Organisms → cellular organisms → Bacteria	2023	Open in IMG/M
3300009012\|Ga0066710_100933987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1336	Open in IMG/M
3300009012\|Ga0066710_100975457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1307	Open in IMG/M
3300009012\|Ga0066710_101158197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1197	Open in IMG/M
3300009012\|Ga0066710_101330625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1114	Open in IMG/M
3300009012\|Ga0066710_101420658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1075	Open in IMG/M
3300009012\|Ga0066710_101605007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	996	Open in IMG/M
3300009012\|Ga0066710_104726483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300009137\|Ga0066709_100921531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1275	Open in IMG/M
3300010044\|Ga0126310_11086613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300010045\|Ga0126311_10680508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	821	Open in IMG/M
3300010336\|Ga0134071_10779907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300010360\|Ga0126372_10798046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	935	Open in IMG/M
3300011119\|Ga0105246_10539778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300012198\|Ga0137364_10370620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1069	Open in IMG/M
3300012198\|Ga0137364_10482734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	931	Open in IMG/M
3300012198\|Ga0137364_10511227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300012201\|Ga0137365_11203303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300012210\|Ga0137378_10809544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	849	Open in IMG/M
3300012356\|Ga0137371_10239400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1418	Open in IMG/M
3300012356\|Ga0137371_10906902	Not Available	670	Open in IMG/M
3300012357\|Ga0137384_10168564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1833	Open in IMG/M
3300012358\|Ga0137368_10441329	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300012925\|Ga0137419_11753941	Not Available	530	Open in IMG/M
3300012927\|Ga0137416_10637912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	931	Open in IMG/M
3300012929\|Ga0137404_10848648	Not Available	831	Open in IMG/M
3300012951\|Ga0164300_10407288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300012972\|Ga0134077_10541896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300012989\|Ga0164305_11089444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300013772\|Ga0120158_10199282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1048	Open in IMG/M
3300014154\|Ga0134075_10492514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300014157\|Ga0134078_10319846	Not Available	673	Open in IMG/M
3300018051\|Ga0184620_10302775	Not Available	539	Open in IMG/M
3300018054\|Ga0184621_10185643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300018066\|Ga0184617_1148140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300018431\|Ga0066655_10751278	Not Available	662	Open in IMG/M
3300018431\|Ga0066655_11089267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300018433\|Ga0066667_10290019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1266	Open in IMG/M
3300018433\|Ga0066667_12174067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300018482\|Ga0066669_12404039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300019269\|Ga0184644_1194851	Not Available	555	Open in IMG/M
3300019767\|Ga0190267_11682172	Not Available	501	Open in IMG/M
3300020059\|Ga0193745_1100117	Not Available	618	Open in IMG/M
3300021078\|Ga0210381_10081731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1024	Open in IMG/M
3300021080\|Ga0210382_10368433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300021445\|Ga0182009_10271360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	847	Open in IMG/M
3300022756\|Ga0222622_10429374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	935	Open in IMG/M
3300025927\|Ga0207687_10234521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1451	Open in IMG/M
3300026023\|Ga0207677_11509285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300026078\|Ga0207702_11395411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300026095\|Ga0207676_11839257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300028381\|Ga0268264_10703403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1004	Open in IMG/M
3300028711\|Ga0307293_10000434	All Organisms → cellular organisms → Bacteria	10644	Open in IMG/M
3300028714\|Ga0307309_10180297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300028717\|Ga0307298_10157137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300028718\|Ga0307307_10011443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2360	Open in IMG/M
3300028720\|Ga0307317_10201965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300028755\|Ga0307316_10018552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2206	Open in IMG/M
3300028768\|Ga0307280_10238127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300028793\|Ga0307299_10196606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300028799\|Ga0307284_10398147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300028811\|Ga0307292_10017310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2508	Open in IMG/M
3300028819\|Ga0307296_10673175	Not Available	566	Open in IMG/M
3300028824\|Ga0307310_10424607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300028828\|Ga0307312_11102219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300028875\|Ga0307289_10363510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300028878\|Ga0307278_10345921	Not Available	655	Open in IMG/M
3300028884\|Ga0307308_10373255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.54%
Host-Associated	Host-Associated	13.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.81%
Plants	Host-Associated → Plants	13.46%
Aquatic	Environmental → Aquatic	6.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.77%
Sediment	Environmental → Aquatic → Sediment	3.85%
Freshwater	Environmental → Aquatic → Freshwater	2.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.15%
Loam	Environmental → Terrestrial → Soil → Loam	8.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.85%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001334	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illumina	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2165W6_10188061	3300001334	Permafrost	VQHFLRLRSRAAGLFIVALLGGGVALGGAAALGKLGERTTIIRQEAIPSSAAPVAFAQGKRMSVSYTHLRAHETR
A30PFW6_10528433	3300001361	Permafrost	VQHFLRLRSRAAGLFIVALLGGGVALGGAAALGKLGERTTIIRQEAIPSSAAPVAFAQGKRMSINEIYR
A1565W1_113555054	3300001536	Permafrost	VHHFLHLRSRVAGLFIAALLGGGVALAGAASLGKLGESTTVIRQEAIPSSAAPVAFAQGKRMSINEIYRASAPAVVHI
soilH2_102734261	3300003324	Sugarcane Root And Bulk Soil	MHRTLLPSRAVGLIAAALLGGGVALGGAAALGKLGEKTTIVRELAPPSSVAPAAFQPGARQSINAIYRASAPGVVHIETTMRVGETSDPFFGNPFGTTQTQRALGSGFVI
Ga0062593_1035509962	3300004114	Soil	MHRTLLPSRAVGLVAAALLGGVVALGGAAALGRLGDKTTIIREQAAPDSSAPASFQSGKQESINEIYRASAPGVVH
Ga0062589_1027229042	3300004156	Soil	MHRTLLPSRAVGLVAAALLGGVVALGGAAALGRLGDKTTIIREQAAPDSSAPASFQSGKQESINEIYRA
Ga0062590_1002967002	3300004157	Soil	MHRTLLPSRAVGLVAAALLGGVVALGGAAALGRLGDKTTIIREQAAPDSSAPASFQSGKQESINEIYRASAPGVVHIETT
Ga0066688_105019371	3300005178	Soil	VQAGLRFPRALAGVLAAALLGGGIALGGAAALGKLGNKTTIIREDVAPRTSAPAVFQQGKPRSINEIYRASAPAVVHIETTTRIKQPADPFFGNPFRSSQTQRALG
Ga0066678_109607041	3300005181	Soil	VHHFLHLRSRAAGLFAVALLGGGVALGGAVALGKLGEHTTVIRQEAVPSSSAQVAFAQGKRMSINEIYRA
Ga0066676_111639561	3300005186	Soil	MHRTLLPSRAVGLFSAAVLGGGVALGGAAALGKLGDNTTIIREEAAPSSTAPAAFETGKRESINQIYRSSAPGVVHIETTLRVQQTNDPFFGNPFG
Ga0070683_1010015312	3300005329	Corn Rhizosphere	MVHGTLHLRGRAAGLFVAALLGGGVALGGAAALGKLDERTTVIREEAVPSSAAPVLFQPGKGMSINEIYRASAPAVVHIETTTRVQQPSDFFGNP
Ga0070660_1008801732	3300005339	Corn Rhizosphere	MHRTLLPSRAVGLMTSALLGGVVALGGAAALGKLGEKTTIIREEAMPSSSAPASFLTGKRESINEIYRASA
Ga0070661_1018598531	3300005344	Corn Rhizosphere	MVHGTLHLRGRAAGLFVAALLGGGVALGGAAALGKLDERTTVIREEAVPSSAAPVLFQPGKGMSINEIYRASAPAVVHIETTTRVQQPSDFFGNPFGTTQTQR
Ga0070711_1012789321	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VHHFLQRRSRAAGLFAAALLGGGVALGGAAALGSLGERTTVIRQDAVLGSAAPVAFAQGKRMSINEI
Ga0066682_103285421	3300005450	Soil	VHRTLHLQSRAAGLFAAAVLGGGVALGGAAALGKLGENTTVIREEAVPTSSAPVALQQGKGMSINEIYRA
Ga0070681_116972981	3300005458	Corn Rhizosphere	VHRTLHLRSRAVGLFTVALLGGGVALGGAAALGKLGDHTTVIRQEAVPSSSAPVVLQQGKGLSINEIYRASAPAVVHIETTSRTQQPSDFFGNPFGTTETQRALG
Ga0070685_105601831	3300005466	Switchgrass Rhizosphere	MVHGTLHLRGRAAGLFVAALLGGGVALGGAAALGKLDERTTVIREEAVPSSAAPVLFQPGKGMSINEIYRASAPAVVHIETTTRVQQPSNFFGNPFGTTQ
Ga0070685_109569411	3300005466	Switchgrass Rhizosphere	MHRTLLPRRAAEPVAVALLGGCIALGGAAALGKLGEKTTIIREEAMPSSSAPASFLTGKRESINEIYRASAPGV
Ga0070698_1003591251	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MHRTLLPSRAATFIASALLGGGVALGGAAVLGKLGDKTTVIREEAAPSSAAPASFQTGRRESINAIYRASAPGVVHIETTSRVEAPTDPFFGN
Ga0070699_1019306852	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VHRTLHLRSRAAGVFAAAVLGGGVALGGAAALGKLGEHTTVIREEAVPSSSAPVALQQGKGMSINEIYRASAPAV
Ga0073909_105329552	3300005526	Surface Soil	MVHGTLHLRGRAAGLFVAALLGGGVALGGAAALGKLDERTTVIREEAVPSSAAPVLFQPGKGMSINEIYRASAPAVVHIETTTRVQQPSDFFGNPFGT
Ga0070704_1013451362	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VHRTLHLRSRAAGLFTAALLGGGVALGGAAALGKLGDHTTVIRQEAVPSSSAPVVLQQGKGLSINEIYRASAPAVVH
Ga0066701_107131691	3300005552	Soil	VARIVQLPRRVAAFLAVALLGGSVALGGAAALGKLGEKTTIIREVAAPNSPAPAVFQQAQQRSINEIYRASAPAVVHIETTTRVRQPADPFFGNPFGTSQTQ
Ga0066704_100981763	3300005557	Soil	VQAGLRFPRALAGVLAAALLGGGIALGGAAALGKLGNKTTIIREDVAPRTSAPAVFQQGKPRSINEIYRASAPAVVHIETT
Ga0066699_105941611	3300005561	Soil	MHRTLLPRRAAGAIAAALLGGGVALGGAAALGKLGDNTTLIREEAAPTSSEPAAFQNGPPESINAIYRASAPGVVHIETTTRVQQPAEPFFGNPFGTAETQRALGSGFVIDK
Ga0068860_1021634881	3300005843	Switchgrass Rhizosphere	MVHGTLHLRGRAAGLFVAALLGGGVALGGAAALGKLDERTTVIREEAVPSSAAPVLFQPGKGMSINEIYRASAPAVV
Ga0081539_102362592	3300005985	Tabebuia Heterophylla Rhizosphere	MHRTLLPSRAAGPIAAAVLGGGVALGGAAALGKLGSETTVIREELPASQAAPASFQTGRRESINEVYRTTAPGVVHIETAMRVAEPADPFFGNPF
Ga0070717_106490291	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MHRTLLPRRAVGLIAAAFLGGGVALAGAAALGKLGDSTTIIREEAAPSSSAPASFQTGRRESINAIYRSSAPGVVHIETTLR
Ga0066652_1002909041	3300006046	Soil	MHHTLLPSRAVGLIAAALLGGGIALGGAAALGKLGDNTTIIREEAAPSSSAPASFQTGARESINEIYRASAP
Ga0066652_1018366871	3300006046	Soil	VHRTLHLRGRAAGLFIAALLGGGVALGGAAALGKLGEHTTVIRQEAVPNSSAPVTFQPGKGMSINEIYRA
Ga0066659_110719981	3300006797	Soil	VQAGLRFPRALAGVLAAALLGGGIALGGAAALGKLGNKTTIIREEVAPRSSAPAVFQQGKQRSINEIYRAAAPAVVHIETTTRVKQPADPFFGNPFGTSQTQGALGS
Ga0075431_1005355371	3300006847	Populus Rhizosphere	MHRTLLPSRAVGLVAAALLGGVVALGGAAALGRLGDKTTIIREQAAPDSSAPASFQSGKQESINEIY
Ga0075425_1001627831	3300006854	Populus Rhizosphere	MHRTLLPSRAVGLMTSALLGGVVALGGAAALGKLGEKTTIIREEAMPSSSAPASFLTGKRESINEIYRASAPGVVHIETTLKV
Ga0075434_1006215362	3300006871	Populus Rhizosphere	MHRTLLPSRAVGLVASALLGGGIALGGAAALGKLGNKTTIIREEMPPSSSAPAAFQTGKRESINEIYRSSAPGVVHIETTMRVS
Ga0075435_1015016041	3300007076	Populus Rhizosphere	MHRTLLPSRAVGLMTSALLGGVVALGGAAALGKLGEKTTIIREEAMPSSSAPASFLTGKRESINEIYRASAPGVVHIETTLKVQQNDPFFGNPFGATAQTERALGS
Ga0066710_1004097531	3300009012	Grasslands Soil	VQASFRFPRALAGLFAAALLGGGIALGGAAAFGKLGDKTTIIREEVAPRSSAPAVFQQGKQRSINEIYRAAAPAVVHIETTTRVKQPAD
Ga0066710_1009339871	3300009012	Grasslands Soil	VHHFLHLRSRAAGLFAVALVGGGVALGGAAALGKLGEHETVIRQEAVPSSSAQVAFAQGKRMSINEIYRASAPAVVHIETTSRV
Ga0066710_1009754573	3300009012	Grasslands Soil	VHRTLLPRRAAGLLAAAILGGGVALGGAAVLGKLGENTTIIREEAAPSSSAPAAFQSGQRRSINAIYRASAPGVVHIETTTKIQQPQDQFFGNP
Ga0066710_1011581973	3300009012	Grasslands Soil	VRSTFLLSRRIAGFLAAAVLGGGVALGGAAALGRLGETTTVIRQEALPSTSAPASFAQGARRSINEIYRASAPAVVHIETTTK
Ga0066710_1013306251	3300009012	Grasslands Soil	VHHFLHLRSRAAALLAVALLGGGVALGGAAALGKLGEHTTVIRQEAVPSSSAPVAFAQGKRMSINEIYRASAPAVVHI
Ga0066710_1014206581	3300009012	Grasslands Soil	VHHFLHLRSRAAGLFAVAFLGGGIALGGAAALGKLGEHTTVIRQEAVPSSSAQVAFAQGKRMSINEIYRASAPAVVHIETTSRV
Ga0066710_1016050071	3300009012	Grasslands Soil	VHHFLHIRSRVAWLFAAALLGGGVALGGAAALGKLGEHTTTIREQAVLSSSAPVVFAQGKRMSINEIYRSSAPAVVHIETTSRVRQPADFFGNPFGTNQTQRALG
Ga0066710_1047264831	3300009012	Grasslands Soil	MHRTLLPSRAVGLVVSALLGGGVALGGAAAVGRLGEKTTVIREELAPSSSEPAAFQNSRRESINAIYRASAPGVVHIE
Ga0066709_1009215311	3300009137	Grasslands Soil	VHHFLHLRSRAAALLAVALLGGGVALGGAAALGKLGEHTTVIRQEAVPSSSAPVAFAQGKRMSINEIYRASAPAVVHIETTSRVQQP
Ga0126310_110866131	3300010044	Serpentine Soil	MHRTLLPSRAAGLVVAALLGGGIALGGAAALGKLGDKTTIIREEAAPSSVAPAAFDTGKRESINSIYRASAPGVVHIETATRVPQQEDPFFGNPFGTAQTQRA
Ga0126311_106805081	3300010045	Serpentine Soil	MSMQDTLLPRRAVGLTAAALLGGGVALGGAAAAGKLGERTTVIREQLAPPSVSAAAFDTGRRESINAIYRSSAPGVVHIETTMRVAQQGDQFFGSPFEQAQAQRALGSGFVI
Ga0134071_107799071	3300010336	Grasslands Soil	VQASFRFPRALAGLLAAALLGGGIALGGAAAFGKLGDKTTIIREEVAPRSSAPAVFQQGKQRSINEIYRAAAPAVVHIETTTRVKQPADLFFGNPFGTSQTQRALGS
Ga0126372_107980461	3300010360	Tropical Forest Soil	MHRTLLPSRAAGLAFTAVVGGAVALGGAAALGKLGDKTTVIREEVEPSSSAPASFQTGQRESINQIYRASAPGVVHIETTLRVQQPNDPFFGNPFGATTQTERALGSGFVIDK
Ga0134128_121968541	3300010373	Terrestrial Soil	MHRTLLPSRAAGPIVAAVLGGGVALGGAAALGELGSETTVIREELPASQAAPASFQTAGRRESINEVYR
Ga0105246_105397782	3300011119	Miscanthus Rhizosphere	MVHGTLHLRGRAAGLFVAALLGGGVALGGAAALGKLDERTTVIREEAVPSSAAPVLFQPGKGMSINEIYRASAPAVVHIE
Ga0137364_103706202	3300012198	Vadose Zone Soil	MHRTLLPSRAVGPIAAALLGGGVALVGAAALGKLGEKTTIIREEVAPNSIAPAAFQTGRRESINAIYRASAPGVVHIETTTRVAQ
Ga0137364_104827341	3300012198	Vadose Zone Soil	VHHFLHLRSRAAGLFAVAILGGGVALGGAAALGKLGEHTTVIRQEAVPSSSAPVDFAQGKRMSINEIYRASAPAVVHIETTSRV
Ga0137364_105112272	3300012198	Vadose Zone Soil	VRSTFLLSRRIAGFLAAAVLGGGVALGGAAALGRLGETTTVIRQEALPSTSAPASFAQGARRSINEIYRASAPAVVHIETTTKLQQP
Ga0137365_112033032	3300012201	Vadose Zone Soil	VHHFLHLRSRAAGLFAVALLGGGVALGGAAALGKLGERTTVIRQEAVPSSSATVAFAQGKRMSINEIYRAS
Ga0137378_108095442	3300012210	Vadose Zone Soil	VHHFLHLRSRAAGLFAAALLGGGVALGGAAALGKLGEHTTTIREQAVLSSSAPVVFAQGKRMSINEIYRSSAPAVVHIETTSRVRQPADFFGNP
Ga0137371_102394001	3300012356	Vadose Zone Soil	VRRTFLLSRRAVGFLAAAVLGGGVALGGAAALGKLGETTTVIRQEAVPNSSAPASFAQGARRSINEIYRASAPAVVHIETTTKVQQPQDQFFGNSFGGSQTQRALGSGFVIDK
Ga0137371_109069022	3300012356	Vadose Zone Soil	VHHFLHLRSRAAGLFAVALLGGGVALGGAAALGKLGERTTIIRQEAVPSSSAPVAFAQGKRMSINEIYRASAPAVVHIETTSRV
Ga0137384_101685644	3300012357	Vadose Zone Soil	VHHFLHLRSRAAGLFAAALLGGGVALGGAAALGKLGEHTTTIREQAVLSSSAPVVFAQGKRMSIN
Ga0137368_104413291	3300012358	Vadose Zone Soil	MHRTLLPSRAVGLIAAALLGGGVALGGAAAVGKLGNKTTIIREVAPSSSAPAAFQTGKRESINAIYRVSAPGVVHIETTT
Ga0137419_117539412	3300012925	Vadose Zone Soil	VHHFLHLRSRAAGFFVAALLGGGVALAGAASLGKLGESTTIIRQETIPSSAAPVAFAQGKRMSINEI
Ga0137416_106379122	3300012927	Vadose Zone Soil	VHHFLHIRSRVAWLFAAALLGGGVALGGAAALGKLGEHTTTIREQAVLSSSAPVVFAQGKRMSINEIYRSSAPAVVHIETTSRVRQPADFFGNPFGTN
Ga0137404_108486482	3300012929	Vadose Zone Soil	VHHFLHLRSRAAALFAVALLGGGVALGGAAALGKLGEHTTVIRQEAVPSSSAPVAFAQGKRMSINEIYRASAPAVVHIETTSRVQQPSDFYGNPFGASQTQRA
Ga0164300_104072882	3300012951	Soil	MVHRTLHLRSRAAGLFFAALLGGAVALGGAATLGKLGQRTTVIREEAVPSSLAPVLFQPGKGMSINEIYRASAPAVVH
Ga0134077_105418961	3300012972	Grasslands Soil	MHRTLLPSRAVGPIAAALLGGGVALVGAAALGKLGEKTTIIREEIAPNSIAPAAFQTGRRESINAIYRASAPGVVHIETTTRVAQQDDPFFGNPFGAAQTQRALGSGFV
Ga0164305_110894442	3300012989	Soil	VHRTLNLRGRAAGLFVAALLGGAVALGGAAALGRLGDHTTVIRQEAVPSTSAPVVFQQGKGMSINEIYRASAPAVVHIETTSRVQQPSDFFGNPFGTT
Ga0120158_101992821	3300013772	Permafrost	VHRTLHLRGRAAGLFIAPLLGGGVALGGAAALGKLGEHTTVIRQEAVPNSSAPVTFQPGKGMSINEIYRTSAPAVVH
Ga0134075_104925141	3300014154	Grasslands Soil	VHRTLHLRSRAAGVFLAALLGGGVSLGGAAALGKLGEHTTVIRQEAVPSSSAPVTFQPGKGMSINEIYRASAPAVVHIETTSRVQQPSDFFGNPFGTTET
Ga0134078_103198462	3300014157	Grasslands Soil	VHHFLHIRSRVAWLFAAALLGGGVALGGAAALGKLGEHATTIREQAVLSSSAPVVFAQGKRMSINEIYRSSAPAVVHIETTSRVR
Ga0184620_103027752	3300018051	Groundwater Sediment	VHRTLHLRSRAAGLFTAALLGGGVALGGAAALGKLGDHTTVIRQEAAVPGSSAPVVLQQGKGLSINEIYR
Ga0184621_101856432	3300018054	Groundwater Sediment	VHHFLHLRSRAAGLFAVALLRGGVALGGAAALGKLGEHTTVIRQEAVPSSSAPAAFAQGKRMSINEIYRASAP
Ga0184617_11481402	3300018066	Groundwater Sediment	VHRTLHLRNRAVGLFTVALLGGGVALGGAAALGKLGDHTTVIRQEAAVPGSSAPVVLQQGKGLSINEIYRASAPAVVHLATT
Ga0066655_107512781	3300018431	Grasslands Soil	VHHFLHLRSRAAGLFAVALLGGGVALGGAAALGKLGEHTTVIRQEAVPSSSAQVAFAQGKRMSINEIYRASAPAVVH
Ga0066655_110892671	3300018431	Grasslands Soil	VHRTLHLRSRAAEVFLAALLGGGVSLGGAAALGKLGEHTTVIRQEAVPSSSAPVTFQPGKGMSINEIYRASAPAVVHIETTSRVQQPSDFFGNPFGTT
Ga0066667_102900193	3300018433	Grasslands Soil	VHHFLHLRSRAAGLFAVALLGGGVALGGAVALGKLGEHTTVIRQEAVPSSSAQVAFAQGKRMSINEIYRASAPAVVHIETTS
Ga0066667_121740672	3300018433	Grasslands Soil	VHRTFLLPRRAVGLVAAALLGGSIALGGAAALGKLGEKTTVIREEAAPTSSAPAAFNEGKRMSINDIYRASAPAVVHIETTT
Ga0066669_124040391	3300018482	Grasslands Soil	MHRTLLPSRAVGLVAAALLGGGVALGGAAALGKLGDKTTLIREEAAPTSSEPASFQNGPRESINAIYRASAPGVVHIETTSRVQQPADPFFGNPFGTSETQRALGS
Ga0184644_11948511	3300019269	Groundwater Sediment	VHHFLHVRSRAAGLFAAALLGGGVALGGAAALGKLGDHMTVIRQEAVLSSSAPVAFAQGKRMSINEIYRASAPAVVHIETTSRVRESSDFF
Ga0190267_116821721	3300019767	Soil	KVHRTLHLRSRAAGLFTAALLGGGVALGGAAALGKLGDQTTVIRQEAVPNSSAPVVLQQGKGLSINEIYRASAPAVVHIETTSRTQQPSSVCRAS
Ga0193745_11001172	3300020059	Soil	VHHFLHLRSRAAGLFAVALLGGGVALGGAAALGKLGEHTTVIRQEAVPSSSAPVAFAQGKRMSINEIYRASAPAVVHIETTSRVQQPSD
Ga0210381_100817311	3300021078	Groundwater Sediment	VHRTLHLRSRAAGLFTAALLGGGVALGGAAALGKLGDHTTVIRQEAVPSSSAPVALQQGKGLSINEIYRASAPAVVHIETTTRTQQPSDFFGNPFGTTETQR
Ga0210382_103684332	3300021080	Groundwater Sediment	MHRTLLPSRAVGPIAAALLGGGVALVGAAALGKLGDKTTIIREEVAPSSLAPAAFQTGKRESINSIYRASAPGVVHIETTTRVAQQDDPFFGNPFGAAQTQRALGSGF
Ga0182009_102713601	3300021445	Soil	MHRTLLPSRAVGLIAPALLGGAVALGGAAALGKLGDKTTIIREEAMPSSSAPASFLTGRRESINQIYRASAPGVVHIETTLRVQQP
Ga0222622_104293741	3300022756	Groundwater Sediment	VHRTLHLRSRAAGLFTAALLGGGVALGGAAALGKLGDHTTVIRQEAVPSSSAPVVLQQGKGLSINEIYRASAPAVVHIETTSRTQQPSDF
Ga0207687_102345213	3300025927	Miscanthus Rhizosphere	MVHGTLHLRGRAAGLFVAALLGGGVALGGAAALGKLDERTTVIREEAVPSSAAPVLFQPGKGMSINEIYRASAPAVVHIETTTRVQQPS
Ga0207677_115092851	3300026023	Miscanthus Rhizosphere	MHRTLLPRRAAEPVAVALLGGCIALGGAAALGKLGDKTTIIREEVDAAPSAPASFQTGKRLSINEIYRSSAPGVVHIETTLRVQPADPFFGNPFGTKTETERALGS
Ga0207702_113954112	3300026078	Corn Rhizosphere	MVHGTLHLRGRAAGLFVAALLGGGVALGGAAALGKLDERTTVIREEAVPSSAAPVLFQPGKGMSINEIYRASAPAVVHIETTTRVQQPSDF
Ga0207676_118392571	3300026095	Switchgrass Rhizosphere	MVHGTLHLRGRAAGLFVAALLGGGVALGGAAALGKLDERTTVIREEAVPSSAAPVLFQPGKGMSINEIYRASAPAVVHIETTTRVQQPSDLFGNPFGTTQTQRAL
Ga0268264_107034031	3300028381	Switchgrass Rhizosphere	MVHGTLHLRGRAAGLFVAALLGGGVALGGAAALGKLDERTTVIREEAVPSSAAPVLFQPGKGMSINEIYRASAPAVVHIETTT
Ga0307293_1000043414	3300028711	Soil	VHHFLHVRSRAAGLFAAALLGGGVALGGAAALGKLGDHMTVIRQEAVLSSSAPVAFAQGKRM
Ga0307309_101802971	3300028714	Soil	MHRTLLPSRAVGSIAAALLGGGVALVGAAALGKLGDKTTIIREEVAPSSLAPAAFQTGQRESINSIYRASAPGVVHIETTTRVAQQDDPFFGNPFGAAQTQRALGSGFVLD
Ga0307298_101571372	3300028717	Soil	VHRTLHLRSRAAGLFTTALLGGGVALGGAAAFGKLGEHTTVIREEAVPRTSAPVVLQQGKGMSINEIYR
Ga0307307_100114431	3300028718	Soil	VHRTLHLRSRAAGLFTAALLGGGVALGGAAALGKLGEHTTVIRQEAVPSSSAPVVLQQGKGLSINQIYRASAPAVVHIETTSRTQQP
Ga0307317_102019651	3300028720	Soil	VHRTLHLRSRAAGLFIAALLGGGVALGGAAALGKLGENTTVIRQEAVPSSSAPVVLQQGKGLSINEIYRASAPAVVHIETTSR
Ga0307316_100185524	3300028755	Soil	VHRTLHLRSRAAGLFTAALLGGGVALGGAAALGKLGDHTTVIRQEAAVPGSSAPVVLQQGKGLSINEIYRASAPAVVHI
Ga0307280_102381272	3300028768	Soil	MHRTLLPSRAVGPIAAALLGGGVALVGAAALGKLGDKTTIIREEVAPSSLAPAAFQTGKRESINSIYRASAPGVVHIETT
Ga0307299_101966062	3300028793	Soil	MHRTLLPSRAVGPIAAALLGGGVALVGAAALGKLGDKTTIIREEVAPSSLAPAAFQTGKRESINSIYRASAPGVVHIETTTRVAQQDDPFFGNPFGAA
Ga0307284_103981472	3300028799	Soil	MHRTLLPSRAAGVTAAALLGGGVALGGAAALGKLGEKTTIIREEAMPNSVAPAIFQNSRHESINAIYRASAPGVVHIET
Ga0307292_100173104	3300028811	Soil	MHRTLLPSRAVGPIAAALLGGGVALVGAAALGKLGDKTTIIREEVAPSSLAPAAFQTGKRESINSIYRASAPGVVHIETTTRVAQQDDPFFGNPFGAAQT
Ga0307296_106731751	3300028819	Soil	VHRTFHLRSRAAGLFTAALLGGGVALGGAAALGKLGEHTTVIRQEAIPSSSAPVVLQQGKGLSINQIYRASAPA
Ga0307310_104246071	3300028824	Soil	MHRTLLPSRAVGVIAAALLGGGIALGGAAALGKLGEKTTIIREQVAPSSAAPAVFQAGRRQSINAIYRASAPG
Ga0307312_111022192	3300028828	Soil	VHRTLHLRSRAAGLFTAALLGGGVALGGAAALGKLGDHTTVIRQEAAVPGSSAPVVLQQGKGLH
Ga0307289_103635101	3300028875	Soil	MHRTLLPSRAVGPIAAALLGGGVALVGAAALGKLGDKTTIIREEVAPSSLAPAAFQTGKRESINSIYRAS
Ga0307278_103459211	3300028878	Soil	MHRTLLPSRAVGPIAAALLGGGVALVGAAALGKLGEKTTIIREEVAPNSLAPAAFQTGKRESINAIYRAS
Ga0307308_103732552	3300028884	Soil	VHQTLQWRRAAGLLAAALLGGGIALGGAAGLGRLGEKTTIIREEVAPRTSAPAAFQQGAQRSINDIYRASAPGVVHIETATKVPQASDPFFGNPFGGSQTQRALGSGFVIDKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098295

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences