NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F098481

Metagenome Family F098481

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098481
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 44 residues
Representative Sequence MSKYGVTQTVLREEKYLVEALKEMGYEVEVHPEGAQLNSYYSEQ
Number of Associated Samples 73
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 86.41 %
% of genes from short scaffolds (< 2000 bps) 87.38 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (68.932 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(34.952 % of family members)
Environment Ontology (ENVO) Unclassified
(70.874 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(58.252 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.72%    β-sheet: 0.00%    Coil/Unstructured: 65.28%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF02768DNA_pol3_beta_3 7.77
PF03150CCP_MauG 1.94
PF13592HTH_33 1.94
PF00692dUTPase 1.94
PF06868DUF1257 1.94
PF14319Zn_Tnp_IS91 0.97
PF13338AbiEi_4 0.97
PF03162Y_phosphatase2 0.97
PF11348DUF3150 0.97
PF05199GMC_oxred_C 0.97
PF01435Peptidase_M48 0.97
PF01569PAP2 0.97
PF02310B12-binding 0.97
PF02897Peptidase_S9_N 0.97
PF13353Fer4_12 0.97
PF13282DUF4070 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0592DNA polymerase III sliding clamp (beta) subunit, PCNA homologReplication, recombination and repair [L] 7.77
COG0717dCTP deaminaseNucleotide transport and metabolism [F] 1.94
COG0756dUTP pyrophosphatase (dUTPase)Defense mechanisms [V] 1.94
COG1858Cytochrome c peroxidasePosttranslational modification, protein turnover, chaperones [O] 1.94
COG1505Prolyl endopeptidase PreP, S9A serine peptidase familyAmino acid transport and metabolism [E] 0.97
COG1770Protease IIAmino acid transport and metabolism [E] 0.97
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 0.97
COG2365Protein tyrosine/serine phosphatase Oca4Signal transduction mechanisms [T] 0.97

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms68.93 %
UnclassifiedrootN/A31.07 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004152|Ga0062386_101781418All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300005166|Ga0066674_10508779All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300009519|Ga0116108_1095265All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium904Open in IMG/M
3300009524|Ga0116225_1450173Not Available572Open in IMG/M
3300009615|Ga0116103_1071467All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium929Open in IMG/M
3300009616|Ga0116111_1142635Not Available573Open in IMG/M
3300009638|Ga0116113_1121190All Organisms → cellular organisms → Bacteria → Acidobacteria641Open in IMG/M
3300009639|Ga0116122_1125008All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes826Open in IMG/M
3300009639|Ga0116122_1224414Not Available585Open in IMG/M
3300009643|Ga0116110_1256768All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300009646|Ga0116132_1047927All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA21382Open in IMG/M
3300009764|Ga0116134_1034636Not Available1985Open in IMG/M
3300009764|Ga0116134_1170698All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium763Open in IMG/M
3300010343|Ga0074044_10834766Not Available602Open in IMG/M
3300010379|Ga0136449_100643679All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1794Open in IMG/M
3300010379|Ga0136449_104413172All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium518Open in IMG/M
3300012210|Ga0137378_10445834All Organisms → cellular organisms → Bacteria → Proteobacteria1199Open in IMG/M
3300012359|Ga0137385_10887220All Organisms → cellular organisms → Bacteria → Acidobacteria738Open in IMG/M
3300014151|Ga0181539_1378798All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300014153|Ga0181527_1034140All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2967Open in IMG/M
3300014153|Ga0181527_1190579All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium863Open in IMG/M
3300014153|Ga0181527_1273701Not Available673Open in IMG/M
3300014155|Ga0181524_10510875Not Available509Open in IMG/M
3300014156|Ga0181518_10415259All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300014156|Ga0181518_10485192All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium587Open in IMG/M
3300014156|Ga0181518_10501808All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium574Open in IMG/M
3300014160|Ga0181517_10236013All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium984Open in IMG/M
3300014162|Ga0181538_10041339All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2944Open in IMG/M
3300014162|Ga0181538_10273947Not Available924Open in IMG/M
3300014493|Ga0182016_10766071Not Available538Open in IMG/M
3300014494|Ga0182017_10319651All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium970Open in IMG/M
3300014496|Ga0182011_10377702Not Available928Open in IMG/M
3300014496|Ga0182011_10967084All Organisms → cellular organisms → Bacteria → Acidobacteria528Open in IMG/M
3300014638|Ga0181536_10177330All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1086Open in IMG/M
3300014839|Ga0182027_10141707All Organisms → cellular organisms → Bacteria2842Open in IMG/M
3300014839|Ga0182027_10162405All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2622Open in IMG/M
3300014839|Ga0182027_10627623All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1150Open in IMG/M
3300014839|Ga0182027_10857404All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2944Open in IMG/M
3300017822|Ga0187802_10353989All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300017823|Ga0187818_10451791Not Available574Open in IMG/M
3300017929|Ga0187849_1052170All Organisms → cellular organisms → Bacteria → Acidobacteria1904Open in IMG/M
3300017929|Ga0187849_1069037Not Available1577Open in IMG/M
3300017929|Ga0187849_1387712Not Available511Open in IMG/M
3300017931|Ga0187877_1191415Not Available806Open in IMG/M
3300017931|Ga0187877_1387174Not Available529Open in IMG/M
3300017935|Ga0187848_10472017All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300017938|Ga0187854_10097457All Organisms → cellular organisms → Bacteria → Acidobacteria1383Open in IMG/M
3300017940|Ga0187853_10292580Not Available738Open in IMG/M
3300017941|Ga0187850_10036610All Organisms → cellular organisms → Bacteria → Acidobacteria2630Open in IMG/M
3300017943|Ga0187819_10131932All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1489Open in IMG/M
3300017946|Ga0187879_10070116All Organisms → cellular organisms → Bacteria → Acidobacteria2036Open in IMG/M
3300017948|Ga0187847_10643739Not Available594Open in IMG/M
3300017955|Ga0187817_10657321All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium669Open in IMG/M
3300017955|Ga0187817_10963798All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300017975|Ga0187782_11441751All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium542Open in IMG/M
3300017996|Ga0187891_1083311All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus1244Open in IMG/M
3300017996|Ga0187891_1198607All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium686Open in IMG/M
3300017996|Ga0187891_1273261Not Available557Open in IMG/M
3300017998|Ga0187870_1127276Not Available953Open in IMG/M
3300017998|Ga0187870_1164961Not Available800Open in IMG/M
3300018002|Ga0187868_1309855All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M
3300018003|Ga0187876_1180936Not Available718Open in IMG/M
3300018004|Ga0187865_1013032All Organisms → cellular organisms → Bacteria → Acidobacteria4352Open in IMG/M
3300018004|Ga0187865_1125596All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium919Open in IMG/M
3300018013|Ga0187873_1029527All Organisms → cellular organisms → Bacteria → Acidobacteria2618Open in IMG/M
3300018015|Ga0187866_1231480Not Available671Open in IMG/M
3300018020|Ga0187861_10061312All Organisms → cellular organisms → Bacteria → Acidobacteria1917Open in IMG/M
3300018020|Ga0187861_10209031All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300018021|Ga0187882_1044041All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2169Open in IMG/M
3300018021|Ga0187882_1181063Not Available839Open in IMG/M
3300018022|Ga0187864_10126064All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1296Open in IMG/M
3300018022|Ga0187864_10232979Not Available853Open in IMG/M
3300018022|Ga0187864_10369044Not Available624Open in IMG/M
3300018026|Ga0187857_10358673All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium660Open in IMG/M
3300018030|Ga0187869_10495544All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300018030|Ga0187869_10632444All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300018034|Ga0187863_10840462Not Available521Open in IMG/M
3300018037|Ga0187883_10275130Not Available860Open in IMG/M
3300018040|Ga0187862_10664164Not Available612Open in IMG/M
3300018057|Ga0187858_10435556All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300018088|Ga0187771_11754718All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300018090|Ga0187770_10783605Not Available763Open in IMG/M
3300023075|Ga0224520_1075901All Organisms → cellular organisms → Bacteria → Acidobacteria756Open in IMG/M
3300023090|Ga0224558_1242488All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300025409|Ga0208321_1030046All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300025439|Ga0208323_1009371All Organisms → cellular organisms → Bacteria2497Open in IMG/M
3300027825|Ga0209039_10029042All Organisms → cellular organisms → Bacteria2690Open in IMG/M
3300030659|Ga0316363_10285779All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium663Open in IMG/M
3300030688|Ga0311345_11163241All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300031670|Ga0307374_10026072All Organisms → cellular organisms → Bacteria → Acidobacteria7041Open in IMG/M
3300032069|Ga0315282_10441672All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium764Open in IMG/M
3300032160|Ga0311301_11022003All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1089Open in IMG/M
3300032805|Ga0335078_11065346All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium950Open in IMG/M
3300032805|Ga0335078_11550972Not Available737Open in IMG/M
3300032829|Ga0335070_11204960All Organisms → cellular organisms → Bacteria → Acidobacteria695Open in IMG/M
3300032892|Ga0335081_11179759Not Available875Open in IMG/M
3300032892|Ga0335081_12268846Not Available569Open in IMG/M
3300033402|Ga0326728_10062799All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus5107Open in IMG/M
3300033402|Ga0326728_10630824All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus825Open in IMG/M
3300033402|Ga0326728_10844213All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium659Open in IMG/M
3300033402|Ga0326728_11211797All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300033405|Ga0326727_10230026All Organisms → cellular organisms → Bacteria1958Open in IMG/M
3300033823|Ga0334837_058100All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium948Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland34.95%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog11.65%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland11.65%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen6.80%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment4.85%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.85%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.85%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil4.85%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.91%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil2.91%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.94%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.94%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.97%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.97%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.97%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.97%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009615Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100EnvironmentalOpen in IMG/M
3300009616Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100EnvironmentalOpen in IMG/M
3300009638Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10EnvironmentalOpen in IMG/M
3300009639Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300009646Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150EnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300014151Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaGEnvironmentalOpen in IMG/M
3300014153Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaGEnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014496Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaGEnvironmentalOpen in IMG/M
3300014638Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaGEnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017929Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017938Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017941Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017996Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40EnvironmentalOpen in IMG/M
3300017998Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150EnvironmentalOpen in IMG/M
3300018002Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40EnvironmentalOpen in IMG/M
3300018003Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40EnvironmentalOpen in IMG/M
3300018004Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018015Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150EnvironmentalOpen in IMG/M
3300018020Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100EnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300018022Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300023075Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25EnvironmentalOpen in IMG/M
3300023090Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24EnvironmentalOpen in IMG/M
3300025409Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025439Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300030688II_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300031670Soil microbial communities from Risofladan, Vaasa, Finland - OX-3EnvironmentalOpen in IMG/M
3300032069Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033823Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062386_10178141823300004152Bog Forest SoilMSKYGQTQTVLREEKYLVEALKEMGYEVEVHPEGVHLNSYYSEQEAKVA
Ga0066674_1050877923300005166SoilVSKYAQTVTELREEKYLVEALCEMGYHPEVHAQGAKLNSYFSEQEAKV
Ga0116108_109526523300009519PeatlandMSKYGETQTVLREEKYLVEALKEMGYEVEVHPEGVQLNS
Ga0116225_145017313300009524Peatlands SoilVSKYGEIHTFLREEKYLVEALKEMGYAVEVHPEGVHLNSYYEEQEAKVANI
Ga0116103_107146713300009615PeatlandMSKYGVTQTVLREEKYLVEALKEMGYEVEVHPEGAQLNSYYSEQEARS
Ga0116111_114263523300009616PeatlandVSKYGEIHTFLREEKYLVEALKEMGYEVEVHPEDA
Ga0116113_112119023300009638PeatlandVSKYGEIHTFLREEKYLVEALKEMGYEVEVHPEGAPLNSYYEEQ
Ga0116122_112500823300009639PeatlandVSKYGETITQVREEKYLLDALKEMGYQIEVHPEGAPLNSYYADQE
Ga0116122_122441413300009639PeatlandMSKYGVTQTVLREEKYLVEALKEMGYEVEVHPEGAQLNSYYSEQ
Ga0116110_125676813300009643PeatlandMSKYGQTQTVLQEEKFIVEVLKAMGYEVEVHSEGAQLNSYYAEQEAK
Ga0116132_104792713300009646PeatlandMSKYSVNQTVLREEKYLVEALKEMGYEVEVHPEGVHLNSYY
Ga0116134_103463623300009764PeatlandMSKYGQTQTVLQEEKFIVEVLKAMGYEVEVHSEGAQLNSYYAEQEAKTANILIGA*
Ga0116134_117069823300009764PeatlandMSKYGVTQTVLREEKYLVEALKEMGYEVEVHPEGVQLNSYY
Ga0074044_1083476613300010343Bog Forest SoilVSKYGETVTQVREEKYLLEALTEMGYEVEVHPEGVHLNSYYEEQEAKVAN
Ga0136449_10064367933300010379Peatlands SoilMSKYSVNQTVLREAKYLVEALKEMGFEVEVHPDGAQLNSYYSEQEAE
Ga0136449_10441317213300010379Peatlands SoilMSKYSVNQTVLREEKYLAEALKEMGYEVEVHPEGAPLNSYYAEQ
Ga0137378_1044583413300012210Vadose Zone SoilMSKYAETRTVLREEQYLLEALREMGYEPELHSVGTKLNSYYSDQEAKIA
Ga0137385_1088722013300012359Vadose Zone SoilMSKYAHTVTELREEKHLVEALRETGCHPEVLPQGARLNSYYSEQEAKVALVIIR
Ga0181539_137879813300014151BogMSKYGQTQTVLREEKFLVEALKEMGYEIEVHPEGTQLNSYYSEQ
Ga0181527_103414043300014153BogMSKYGLTQTVLREEKYLVEALKEMGYEVEVHPEGAQLNSYY
Ga0181527_119057913300014153BogMSKYSVNQTVLREEKYLVEALKEMGYEVEVHPEGAPLNSYYSEQEAKAA
Ga0181527_127370113300014153BogMSKYGQTQTVLQEEKYLVEALKEMGYEIEVHPEGAQL
Ga0181524_1051087513300014155BogVSKYGLTQTVLREEKFLVEALKEMGYEVEVHPQGANLNSYYA
Ga0181518_1041525923300014156BogMSKYGLTQTVLREEKYLVEALKEMGYEVEVHPEGVHLNSYYSEQEAKVANIV
Ga0181518_1048519213300014156BogMSKYGEIQTVLREEKFLQDALKEMGYQVEVHPEGARLNSYYSEQEAKV
Ga0181518_1050180813300014156BogMSKYGLTQTVLREEKYLVEALKDMGYEVEVHPEGAHLNSYYSEQEAKVAN
Ga0181517_1023601323300014160BogMSKYSVNQTVLREEKYLVEALKEMGYETEVHPEGAPLNSYYSD
Ga0181538_1004133933300014162BogMSKYGETQTVLREEKFILDALKAMGYQVEVHPEGAPLNSYYSEQ
Ga0181538_1027394713300014162BogMSKYGETQTVLREEKFLLDALKAMGYQAEVHPEGAPLNSYYSEQEAKV
Ga0182016_1076607113300014493BogLSKYGETVTQVREEKYLMEALKEMGYQIEVHPEGALLNSYYSDQE
Ga0182017_1031965123300014494FenMSKYGLTQTVLREEKYLVEALKEMGYEVEVHPEGVPLN
Ga0182011_1037770223300014496FenVSKYGEIHTFLREEKYLVEALKEMGYAVEVHPEGVHLNSYYEEQEA
Ga0182011_1096708423300014496FenMSKYSINQTVLHEEKYLLEALKEMGYAVEVHPEGVHLNSYYEEQE
Ga0181536_1017733013300014638BogMSKYGQTQTVLREEKYLVEALKAMGYEVEVHSEGAQLNSYYAEQEAKTANILIGA*
Ga0182027_1014170733300014839FenMSKYGQTQTVLREEKYLVEALKEMGYEVEVHPEGA*
Ga0182027_1016240513300014839FenMSKYSINQTVLREEKYLVEALKEMGYEVEVHPKGANLNSYYSEQEAK
Ga0182027_1062762313300014839FenMSKYSVNQTVLREEKYLVEALKEMGYEVEVHPLGAALNSYYAEQEAKAANIIIRR*
Ga0182027_1085740423300014839FenVSKYGVTNTVLREEKCLLEALTEMGYQVEVHPGGVPLNSYYSEQGVW*
Ga0187802_1035398923300017822Freshwater SedimentMSKYGETQTVLHEEKFLLDALKEMGYQPEVHPEGAPLNSYYSEQEAKVANIVI
Ga0187818_1045179123300017823Freshwater SedimentLSKYGMTITEVREEKFLVEALKEMGYEVEVHPEGAR
Ga0187849_105217013300017929PeatlandVPKYGLTQTVLREEKYLVEALKEMGYEVEVHPEGVHLNSYYS
Ga0187849_106903723300017929PeatlandMSKYGVTQTVLREEKYLVEALKEMGYEVEVHPEGAQLNSY
Ga0187849_138771223300017929PeatlandVSKYGETHTVLREEKYLVEALKEMGYEVEVHPEGV
Ga0187877_119141513300017931PeatlandMSKYGVTQTVLREEKYLVEALKEMGYEVEVHPEGVHLNSY
Ga0187877_138717413300017931PeatlandLSKYGETVTQVREEKYLLEVLTEMGYEVEVHPEGVHLNSYYEEQEAKVANII
Ga0187848_1047201713300017935PeatlandMSKYGQTQTVLREEKYLVEALKEMGYEVEVHSESAQLNSYYAEQEAKDANI
Ga0187854_1009745713300017938PeatlandVSKYSINQTVLREEKCLVEALKEMGYEVEVHPEGAPLNSYYAEQE
Ga0187853_1029258023300017940PeatlandMSKYSVNQTVLREEKYLVDALKEMGYEVEVHPEGG
Ga0187850_1003661043300017941PeatlandVSKYGEIHTFLREEKYLVEALKEMGYEVEVHPEGVHLNSYYEEQEA
Ga0187819_1013193213300017943Freshwater SedimentVSKYGETQTILHEEKYLLEALKEMGYQVEVHPEGASLNSYYAE
Ga0187879_1007011633300017946PeatlandVSKYGEIHTFLREEKYLVEALKEMGYEVEVHPEGVHLNSYYE
Ga0187847_1064373913300017948PeatlandVSKYGETITQVRDEKYLLDALKEMGYQIEVHTEGAPLNS
Ga0187817_1065732123300017955Freshwater SedimentVSKYGLTQTVLREEKCLVEALKEMGYEVEVHPQGAPLNSYYSEQEAKVANIVIR
Ga0187817_1096379813300017955Freshwater SedimentVSKYGETQTVLREEELLLDALKEMGYQPEVHPEGAPLNSYYSEQKSK
Ga0187782_1144175113300017975Tropical PeatlandMSKYGETQTVLHEEKLLLDALKEMGYQVEVHPEGARLNSYYSEQE
Ga0187891_108331133300017996PeatlandMSKYSVNQTVLREEKYLVEALKEIGYEVEVHPEGAP
Ga0187891_119860713300017996PeatlandMSKYGETQTVLREEKYLVEALKEMGYEVEVHPEGVQLNSYYSEQEANLQERRR
Ga0187891_127326113300017996PeatlandMSKYSVNQTVLREEKYLVEALKEMGYEIEVHPEGVLLNSYYSEQEGKV
Ga0187870_112727613300017998PeatlandVSKYGVTQTVLREEKYLVEALKEMGYEVEVHPEGTQLNSYYSEQ
Ga0187870_116496113300017998PeatlandVSKHGVTQTVLREEKYLVEALKEMGYEVEVHPEGTQLNSYYSEQ
Ga0187868_130985513300018002PeatlandMSKYGQTQTVLREEKYLVEALKEMCYEVEVHSEGAQLNSYY
Ga0187876_118093623300018003PeatlandLSKYGEIHTSLREEKYLLEALTEMGYQVEAHCEGAPLN
Ga0187865_101303273300018004PeatlandVSKYGETHTVLREEKYLVEALKEMGYEVEVHPEGVRLN
Ga0187865_112559613300018004PeatlandMSKYGMTQTVLREEKYLVEALKEMGYEVEVHPEGAQLNS
Ga0187873_102952743300018013PeatlandVSKYGEIHTFLREEKYLVEALKEMGYEVEVHPEGTQ
Ga0187866_123148013300018015PeatlandMSKYAVTQTVLREEKYLVEALKEMGYEVEVHPEGTQLNS
Ga0187861_1006131233300018020PeatlandVPKYGLTQTVLREEKYLVEALKEMGYEVEVHPEGVHLNSYYSEQEA
Ga0187861_1020903113300018020PeatlandVSKYGLTHTVLREEKYLVEALKEMGYEVEVHPEGVQLNSYYSEQEAKVANI
Ga0187882_104404113300018021PeatlandMSKYGLTQTVLREEKYLVEALREMGYEVEVHPEGVQLNSYYSE
Ga0187882_118106323300018021PeatlandLSKYGEIHTSLREEKYLLEALTEMGYQVEVHPEGAPLNSYYSDQEAKVAN
Ga0187864_1012606433300018022PeatlandMSKYGLTQTVLREEKYLVEALKEMGYEVEIHPEGA
Ga0187864_1023297923300018022PeatlandVSKYGETVTQVREEKYLLEALTEMGYEVEVHPEGVHLNSYYEEQ
Ga0187864_1036904413300018022PeatlandMSKYGLTQTVLREEKYLVEVLKEMGYQVEVHSEGAQ
Ga0187857_1035867323300018026PeatlandLSKYGITITEVREEKFLVEALKEMGYEVEVHPDGAQLNSYYSEQE
Ga0187869_1049554413300018030PeatlandMSKYSVNQTVLREEKYLVEALKEMGYEVEVHPEGAQ
Ga0187869_1063244413300018030PeatlandMSKYGLTQTVLREEKYLVEALKEMGYEVEVHPEGTQLNSYYSEQEAKVANI
Ga0187863_1084046213300018034PeatlandVSKYGETVTQVREEKYLLEALTEMGYQVEVHPEGAP
Ga0187883_1027513013300018037PeatlandMSKYSVNQTVLREEKYLVEALKEMGYEIEAHPGGAPLNSYYSDQE
Ga0187862_1066416423300018040PeatlandMSKYGLTQTVLREEKYLVEALKEMGYEVEVHPEGTQLNSYYSEQEA
Ga0187858_1043555613300018057PeatlandMSKYGLTQTVLREEKYLVEVLKEMGYQVEVHSEGAQLNSYYSEQEAKVAN
Ga0187771_1175471813300018088Tropical PeatlandMSKYGETQTVLREEKFLLDALKEMGCQVEVHPQGARLNSYYSEQEG
Ga0187770_1078360513300018090Tropical PeatlandMSKYGQTQTVLREEKYLVEALKEMGYRVEVHPEGAPLN
Ga0224520_107590123300023075SoilMSKYGLTQTLLREEKYLVEALKEMGYEVEVHPEGTQLNSYYSE
Ga0224558_124248823300023090SoilVSKYGEIHTFLREEKYLVEALKEMGYEVEVHPEDAPLN
Ga0208321_103004623300025409PeatlandVPKYGLTQTVLREEKYLVEALKEMGYEVEVHPEGVHLNSYYSE
Ga0208323_100937113300025439PeatlandVSKYGLTQTVLREEKYLVEALREMGYEVEVHPEGTQLNSYYSEQEAKV
Ga0209039_1002904233300027825Bog Forest SoilMSKYSVNQTVLREEKYLVEALKEMGYEVEVHPEGVHLNSYYAEQGVLLARVRDLS
Ga0316363_1028577913300030659Peatlands SoilMSKYGQTQTVLREEKYLVEALKAMGYEVEVHSEGAQMNSYYAEQEAKAANIILRRQH
Ga0311345_1116324113300030688BogLSKYGETVTQVREEKYLMEALKEMGYQIEVHPEGALLNSYYSDQEAKVANIII
Ga0307374_1002607283300031670SoilLSKYAQLVTEVREEKYLVEALKEMGYEVEVHPEGAPLGRYYSE
Ga0315282_1044167223300032069SedimentMSKYGLTQTVLREEKYLVEALKEMGYEVEVHAEGAQLNSYYSDL
Ga0311301_1102200313300032160Peatlands SoilMSKYGQTQTVLREEKYLVEALKAMGYEVEVHPEGAQLNSYYA
Ga0335078_1106534613300032805SoilLSKYGITITEVREEKFLVEALKEMGYEVEVHPEGARLNSYYSEQE
Ga0335078_1155097213300032805SoilLSKYGITITEVREEKFLVEALKEMGYEVEVHPEGA
Ga0335070_1120496023300032829SoilMSKYGESQTVLREEKYLVEALGEMGFHPEVHHETVPLNSY
Ga0335081_1117975933300032892SoilMSKYGETQTVLHEEKFLLGALKEMGYQVEVHPEGAPLNS
Ga0335081_1226884613300032892SoilMSKYGETQTVLREEKFLLDALKEMGYQVEVHSDGA
Ga0326728_1006279923300033402Peat SoilVSKYGEIHTFLREEKYLVEALKEMGYEVEVHPEDEPLNSYYSDQDG
Ga0326728_1063082413300033402Peat SoilVSKYGQTSTVLREEKFLLDALKEMGHQVEVHPEGAPLNSYYSE
Ga0326728_1084421323300033402Peat SoilLSKYGEIHTSLREEKYLLDTLIEMGYQVEVHPEGAPLNSYYAEQEAKVAN
Ga0326728_1121179723300033402Peat SoilVSEYGETQTVLREEKYLVKALKEMGYEVEVHSDGAQLNSCYSEQEAKVANIVIR
Ga0326727_1023002633300033405Peat SoilMSKYGLTQTVLREEKYLVEALKEMGYEVEVHPEGTDR
Ga0334837_058100_1_1413300033823SoilMSKYGLTQTVLREEKYLVEALKEMGYEVEVHPEGVPLTRTTRNKKQS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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