Metagenome Family F098536

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F098536
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	72 residues
Representative Sequence	MQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALREKRGNL
Number of Associated Samples	74
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	46.15 %
% of genes near scaffold ends (potentially truncated)	46.60 %
% of genes from short scaffolds (< 2000 bps)	69.90 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (82.524 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (60.194 % of family members)
Environment Ontology (ENVO)	Unclassified (91.262 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (95.146 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.85% β-sheet: 0.00% Coil/Unstructured: 46.15%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF12705	PDDEXK_1	9.71
PF01464	SLT	1.94
PF07120	DUF1376	1.94
PF08291	Peptidase_M15_3	0.97
PF03118	RNA_pol_A_CTD	0.97
PF00239	Resolvase	0.97
PF00182	Glyco_hydro_19	0.97
PF13659	Obsolete Pfam Family	0.97
PF13540	RCC1_2	0.97
PF15943	YdaS_antitoxin	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	1.94
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	0.97
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.97
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.97
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	0.97
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
All Organisms	root	All Organisms	17.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
cellular organisms	root	All Organisms → cellular organisms	10.68 %
Viruses	superkingdom	All Organisms → Viruses	6.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.68 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	6.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	6.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	6.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.94 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.94 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	6.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.94 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.94 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.94 %
unclassified Clostridiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.94 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	0.97 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000203\|TB18AUG2009E_c000281	Not Available	10343	Open in IMG/M
3300002091\|JGI24028J26656_1001892	Not Available	4217	Open in IMG/M
3300002091\|JGI24028J26656_1007100	Not Available	1553	Open in IMG/M
3300002092\|JGI24218J26658_1000791	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12492	Open in IMG/M
3300002092\|JGI24218J26658_1003364	Not Available	3725	Open in IMG/M
3300002092\|JGI24218J26658_1010483	Not Available	1538	Open in IMG/M
3300002098\|JGI24219J26650_1008272	All Organisms → cellular organisms → Bacteria → Proteobacteria	1872	Open in IMG/M
3300003375\|JGI26470J50227_1001228	Not Available	9256	Open in IMG/M
3300003375\|JGI26470J50227_1005609	Not Available	3470	Open in IMG/M
3300003375\|JGI26470J50227_1015339	Not Available	1794	Open in IMG/M
3300003375\|JGI26470J50227_1031221	Not Available	1057	Open in IMG/M
3300003375\|JGI26470J50227_1031303	Not Available	1055	Open in IMG/M
3300003375\|JGI26470J50227_1037117	Not Available	926	Open in IMG/M
3300003375\|JGI26470J50227_1048783	Not Available	747	Open in IMG/M
3300003375\|JGI26470J50227_1081086	Not Available	500	Open in IMG/M
3300003783\|Ga0007850_1001566	Not Available	2295	Open in IMG/M
3300003787\|Ga0007811_1003470	Not Available	1925	Open in IMG/M
3300003796\|Ga0007865_1015314	Not Available	735	Open in IMG/M
3300003797\|Ga0007846_1009794	Not Available	943	Open in IMG/M
3300003797\|Ga0007846_1023064	Not Available	529	Open in IMG/M
3300003798\|Ga0007842_1011440	Not Available	579	Open in IMG/M
3300003804\|Ga0007817_1007280	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300003813\|Ga0007879_1003167	All Organisms → cellular organisms → Bacteria → Proteobacteria	2531	Open in IMG/M
3300003814\|Ga0007877_1023317	Not Available	670	Open in IMG/M
3300003820\|Ga0007863_1004980	Not Available	1468	Open in IMG/M
3300003820\|Ga0007863_1015824	Not Available	663	Open in IMG/M
3300003827\|Ga0007880_1012111	Not Available	806	Open in IMG/M
3300004688\|Ga0065169_1007724	Not Available	589	Open in IMG/M
3300004690\|Ga0065175_1008409	Not Available	757	Open in IMG/M
3300004692\|Ga0065171_1000750	All Organisms → cellular organisms → Bacteria	5169	Open in IMG/M
3300004770\|Ga0007804_1120062	Not Available	665	Open in IMG/M
3300004806\|Ga0007854_10294928	Not Available	672	Open in IMG/M
3300004807\|Ga0007809_10032666	Not Available	1763	Open in IMG/M
3300004807\|Ga0007809_10101112	Not Available	880	Open in IMG/M
3300006071\|Ga0007876_1001565	All Organisms → cellular organisms → Bacteria	7608	Open in IMG/M
3300006072\|Ga0007881_1126051	Not Available	632	Open in IMG/M
3300006103\|Ga0007813_1043137	Not Available	955	Open in IMG/M
3300006105\|Ga0007819_1051056	Not Available	887	Open in IMG/M
3300006106\|Ga0007833_1007232	Not Available	2332	Open in IMG/M
3300006106\|Ga0007833_1040230	Not Available	868	Open in IMG/M
3300006115\|Ga0007816_1093614	Not Available	662	Open in IMG/M
3300006117\|Ga0007818_1051353	Not Available	780	Open in IMG/M
3300006119\|Ga0007866_1006732	Not Available	2704	Open in IMG/M
3300006122\|Ga0007837_1037564	Not Available	824	Open in IMG/M
3300006127\|Ga0007805_1008223	Not Available	2731	Open in IMG/M
3300006128\|Ga0007828_1051228	Not Available	857	Open in IMG/M
3300006128\|Ga0007828_1109615	Not Available	570	Open in IMG/M
3300009151\|Ga0114962_10044805	Not Available	2944	Open in IMG/M
3300009154\|Ga0114963_10018534	Not Available	4647	Open in IMG/M
3300009159\|Ga0114978_10083239	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300009502\|Ga0114951_10121817	Not Available	1461	Open in IMG/M
3300009502\|Ga0114951_10135101	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300010157\|Ga0114964_10014732	Not Available	4608	Open in IMG/M
3300010158\|Ga0114960_10010937	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6204	Open in IMG/M
3300010233\|Ga0136235_1000593	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	19068	Open in IMG/M
3300010885\|Ga0133913_11974893	Not Available	1450	Open in IMG/M
3300013094\|Ga0164297_10064959	Not Available	1679	Open in IMG/M
3300013094\|Ga0164297_10323893	Not Available	588	Open in IMG/M
3300020686\|Ga0214194_115938	Not Available	645	Open in IMG/M
3300020716\|Ga0214207_1002560	Not Available	3571	Open in IMG/M
3300020733\|Ga0214172_1035894	Not Available	733	Open in IMG/M
3300021131\|Ga0214206_1001501	Not Available	5397	Open in IMG/M
3300021131\|Ga0214206_1002722	All Organisms → cellular organisms → Bacteria	3561	Open in IMG/M
3300021138\|Ga0214164_1045139	Not Available	995	Open in IMG/M
3300021138\|Ga0214164_1112144	Not Available	500	Open in IMG/M
3300021139\|Ga0214166_1101464	Not Available	564	Open in IMG/M
3300021142\|Ga0214192_1102887	Not Available	781	Open in IMG/M
3300022555\|Ga0212088_10226021	Not Available	1446	Open in IMG/M
3300022555\|Ga0212088_10643499	Not Available	644	Open in IMG/M
3300022602\|Ga0248169_101432	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	33315	Open in IMG/M
3300022602\|Ga0248169_111997	Not Available	6458	Open in IMG/M
3300025357\|Ga0208383_1020650	Not Available	785	Open in IMG/M
3300025357\|Ga0208383_1041903	Not Available	511	Open in IMG/M
3300025372\|Ga0207957_1002581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3364	Open in IMG/M
3300025375\|Ga0208259_1046041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	600	Open in IMG/M
3300025379\|Ga0208738_1048205	Not Available	616	Open in IMG/M
3300025379\|Ga0208738_1048471	Not Available	613	Open in IMG/M
3300025385\|Ga0207956_1005278	Not Available	2230	Open in IMG/M
3300025387\|Ga0207959_1008777	Not Available	1842	Open in IMG/M
3300025391\|Ga0208740_1044573	Not Available	621	Open in IMG/M
3300025392\|Ga0208380_1001686	Not Available	5027	Open in IMG/M
3300025400\|Ga0208387_1037461	Not Available	798	Open in IMG/M
3300025401\|Ga0207955_1058298	Not Available	607	Open in IMG/M
3300025407\|Ga0208378_1014811	Not Available	1527	Open in IMG/M
3300025407\|Ga0208378_1029066	Not Available	965	Open in IMG/M
3300025407\|Ga0208378_1052662	Not Available	655	Open in IMG/M
3300025417\|Ga0208616_1052277	Not Available	586	Open in IMG/M
3300025426\|Ga0208739_1000321	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14988	Open in IMG/M
3300025426\|Ga0208739_1052165	Not Available	662	Open in IMG/M
3300025430\|Ga0208622_1056376	Not Available	694	Open in IMG/M
3300025450\|Ga0208744_1010084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2125	Open in IMG/M
3300025648\|Ga0208507_1115783	Not Available	774	Open in IMG/M
3300025778\|Ga0208388_1040510	Not Available	683	Open in IMG/M
3300025781\|Ga0208386_1024770	Not Available	893	Open in IMG/M
3300025781\|Ga0208386_1040017	Not Available	652	Open in IMG/M
3300027708\|Ga0209188_1000310	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	51092	Open in IMG/M
3300027763\|Ga0209088_10007216	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6191	Open in IMG/M
3300027896\|Ga0209777_10569597	Not Available	824	Open in IMG/M
3300027896\|Ga0209777_10601051	Not Available	796	Open in IMG/M
3300027896\|Ga0209777_10782428	Not Available	671	Open in IMG/M
3300027974\|Ga0209299_1218238	Not Available	691	Open in IMG/M
3300031759\|Ga0316219_1240265	Not Available	637	Open in IMG/M
3300032117\|Ga0316218_1184984	Not Available	755	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	82.52%
Lake	Environmental → Aquatic → Freshwater → Lake	16.50%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	66.02%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	16.50%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	9.71%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.85%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	60.19%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	9.71%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.74%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	5.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.88%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.91%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	1.94%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	1.94%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.94%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.97%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003796	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003814	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09	Environmental	Open in IMG/M
3300003820	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07	Environmental	Open in IMG/M
3300003827	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH29Jun09	Environmental	Open in IMG/M
3300004688	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Aug07 (version 2)	Environmental	Open in IMG/M
3300004690	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Jul07 (version 2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006103	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006106	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07	Environmental	Open in IMG/M
3300006115	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09	Environmental	Open in IMG/M
3300006117	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE08Jun09	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006122	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300006128	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010233	Filterable freshwater microbial communities from Conwy River, North Wales, UK. Fraction, filtered through 0.2 um filter. After WGA.	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300020686	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 epilimnion	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020733	Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021138	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021139	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022602	Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnion	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025375	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22May08 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025385	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025387	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025391	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025392	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025400	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025401	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025407	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025417	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025426	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025430	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025450	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025648	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1 (SPAdes)	Environmental	Open in IMG/M
3300025778	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025781	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB18AUG2009E_00028126	3300000203	Freshwater	MQNKYLSEDDVKQVFFQTKMDDPNGYDLDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALREKRGNL*
JGI24028J26656_10018923	3300002091	Lentic	MQNKYVTEEDIKQVFFQSKMDNVEGYDFDELLDFADKVIMFASFNIARVERDMCVDFVKTLNSEVAQALKDKRGNL*
JGI24028J26656_10071003	3300002091	Lentic	MENIYLNENDIKQVFFQSNMDDENGYDLDELLDFADKVIMSAEAVIARRERELCIEFVESLNTQVASALKDKRGPL*
JGI24218J26658_10007913	3300002092	Lentic	MLTNPYLSENDIKQVFFSSNMDNFEGYDLDELLDFADKLILTVAEDIAKRERELCIEFVNSLNTEVGKALRDKRGNL*
JGI24218J26658_10033643	3300002092	Lentic	MQNKYITEDDVKQVFFQSKMDNPEGYDFDEILDFADKIVNFSAVAIARVERTHCIDFVESLNTEVAKALIDKRGSL*
JGI24218J26658_10104833	3300002092	Lentic	MENIYLNENDIKQVFFQSNMDDENGYDLDELLDFADKVIMSAEAVIARRERELCIEFVESLNTQVAAALKDKRGPL*
JGI24219J26650_10082721	3300002098	Lentic	MLTNPYLSENDIKQVFFSSNMDNFEGYDLDELLDFADKLILTVAEDIAKRERELCIEFVNSLNTEV
JGI26470J50227_100122810	3300003375	Freshwater	MQNKYLTEDDIKRVFFQSNMDKEEGYDFDELLDFADKVILTASFPIARTEREFCIEFVESLNVEVAKALREKRGSL*
JGI26470J50227_10056093	3300003375	Freshwater	MQNKYLSENDIKQVFFQSKMDNPEGYDFDELLDFADKLIVTATMDIARRERELCIEFVESLNTEVAKALREKRGPL*
JGI26470J50227_10153394	3300003375	Freshwater	MQNKYLSEDDIKQVFFQTKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALREKRGNL*
JGI26470J50227_10312214	3300003375	Freshwater	FFQCKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL*
JGI26470J50227_10313033	3300003375	Freshwater	MQNKYLSEDDIKQVFFQTKMDDPNGYDLDELLDFADXVIXTAAFNIARAERELCIEFVESLNSEVAKALREKRGNL*
JGI26470J50227_10371172	3300003375	Freshwater	MQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNVARAERELCIEFVESLNSEVAKALREKRGNL*
JGI26470J50227_10487832	3300003375	Freshwater	MQNKYITEEDVKQVFFQSKMDNPEGYDFDEILDFADKIVQFSAVAIARVERHHCIDFVGSLNSEVAKALLEKRGSL*
JGI26470J50227_10810862	3300003375	Freshwater	PLKQQANPVKMQGEHAMQNKYITEEDVKQVFFQSKMDNPEGYDFDEILDFADKIVQFSAVAIARVERHXCXXFVGSLNSEVAKALLEKRGSL*
Ga0007850_10015664	3300003783	Freshwater	MQNKYLSEDDIKRVFFQSNMDKEEGYDFDELLDFADKVILTASFPIARTEREFCIEFVESLNVEVAKALREKRGSL*
Ga0007811_10034704	3300003787	Freshwater	EDDVKQIFFHSKMENVEGYDFDELLDFADKIVLYASFHVARTERELCIEFVESLNSEVAKALRDKRGNL*
Ga0007865_10153141	3300003796	Freshwater	IKQIFFASQMDNVEGYDLDELLDFADKVILTVAEDVARRERELCIDFVKSLNTEVAKALREKRGNL*
Ga0007846_10097942	3300003797	Freshwater	MQNKFLTENDIKQIFFASQMDNVEGYDLDELLDFADKVILTVAEDVARRERELCIDFVKSLNTEVAKALREKRGNL*
Ga0007846_10230642	3300003797	Freshwater	MQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL*
Ga0007842_10114401	3300003798	Freshwater	YLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNVARAERELCIEFVESLNSEVAKALREKRGNL*
Ga0007817_10072802	3300003804	Freshwater	MQNKFLTENDIKQVFFSSNMDNFEGYDLDELLDFADKLILTAAEDIARRERELCIEFVSSLNTEVGKALREKRGNL*
Ga0007879_10031676	3300003813	Freshwater	MQNKFLTENDXXQVFFSSNMDNFEGYDLDELLDFADKLILTAAEDIARRERELCIEFVSSLNTEVGKALREKRGNL*
Ga0007877_10233171	3300003814	Freshwater	AMQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL*
Ga0007863_10049804	3300003820	Freshwater	MQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADXVILTASFNVARAERELCIEFVESLNSEVAKALREKRGNL*
Ga0007863_10158241	3300003820	Freshwater	LVGKIQQFIKVGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL*
Ga0007880_10121111	3300003827	Freshwater	DQKEVKMQNKFLTENDIKQIFFASQMDNVEGYDLDELLDFADKVILTVAEDVARRERELCIDFVKSLNTEVAKALREKRGNL*
Ga0065169_10077241	3300004688	Freshwater	MQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALREKRGNL*
Ga0065175_10084091	3300004690	Freshwater	KQVFFQCKMDDPNGYDFDELLDFADKVILTASFNVARAERELCIEFVESLNSEVAKALREKRGNL*
Ga0065171_10007503	3300004692	Freshwater	MQNKYLTENDIKQIFFASQMDNVEGYDLDELLDFADKLILTAAEDIARRERELCIEFVSSLNTEVGKALREKRGNL*
Ga0007804_11200621	3300004770	Freshwater	GIDGEFDLDQLAEFSDKLVLFASFHIARTERELCIEFVESLNTEVAKALRDKRGPL*
Ga0007854_102949281	3300004806	Freshwater	EHAMQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNVARAERELCIEFVESLNSEVAKALREKRGNL*
Ga0007809_100326661	3300004807	Freshwater	MQNKYLSEDDIKQVFFQTKMDDPNGYDLDELLDFADKVILTASFNIARTERELCIEFVESLNTEVAKALRDKRGPL*
Ga0007809_101011122	3300004807	Freshwater	MLNEYLSENDIKQVFFRSKMDNPEGYDFDELLDFADKLIVTATMDIARRERELCIEFVESLNTEVAKALREKRGPL*
Ga0007876_10015656	3300006071	Freshwater	MQNKYITEDDVKQIFFHSKMENVEGYDFDELLDFADKIVLYASFHVARTERELCIEFVESLNSEVAKALRDKRGNL*
Ga0007881_11260513	3300006072	Freshwater	CKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL*
Ga0007813_10431371	3300006103	Freshwater	QCKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL
Ga0007819_10510561	3300006105	Freshwater	QVFFQCKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL*
Ga0007833_10072324	3300006106	Freshwater	HAMQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL*
Ga0007833_10402304	3300006106	Freshwater	MQNKYLSEDDIKQVFFQTKMDDPNGYDLDELLDFADKVILTASFNIARTERELCIEFVESLNTEVAKALREKRGNL*
Ga0007816_10936141	3300006115	Freshwater	KMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL*
Ga0007818_10513531	3300006117	Freshwater	MQNKYLSEDDIKRVFFQSNMDKEEGYDFDELLDFADKVILTASFPIARTEREFCIEFVESLNVEVAKAL
Ga0007866_10067324	3300006119	Freshwater	MQNKYLTENDIKQIFFASQMDNVEGYDLDELLDFADKVILTVAEDVARRERELCIDFVKSLNTEVGKALREKRGNL*
Ga0007837_10375641	3300006122	Freshwater	NGYDFDELLDFADKVILTASFNVARAERELCIEFVESLNSEVAKALREKRGNL*
Ga0007805_10082234	3300006127	Freshwater	QKEVKMQNKFLTENDIKQVFFSSNMDNFEGYDLDELLDFADKLILTAAEDIARRERELCIEFVSSLNTEVGKALREKRGNL*
Ga0007828_10512284	3300006128	Freshwater	PNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL*
Ga0007828_11096153	3300006128	Freshwater	MDNPEGYDFDEILDFADKIVQFSAVAIARVERHHCIDFVGSLNSEVAKALLEKRGSL*
Ga0114962_100448052	3300009151	Freshwater Lake	MLNEYLSENDVKQIFFQSKMDNPEGYDLDELLDFADKVIMVATMDIARRERELCIEYVETLNTEVAKALREKRGAL*
Ga0114963_100185342	3300009154	Freshwater Lake	MQNKYVSEEDIKQVFFQSKMDNVEGYDFDELLDFADKVIMFASFNIARVERDMCIGFVKTLNVEVAQALKDKRGNL*
Ga0114978_100832395	3300009159	Freshwater Lake	MQNKYVTEEDIKQVFFQSKMDNFEGYDFDELLDFADKVIMFASFEIARVERDMCINFVKTLNAEVAQALKDKRGNL*
Ga0114951_101218173	3300009502	Freshwater	MLTNPYLSENDIKQVFFSSNMDNFEGYDLDELLDFADKLILTVAEDIAKRERELCIEFVSSLNTEVGKALRDKRGNL*
Ga0114951_101351013	3300009502	Freshwater	MENIYLNENDIKQVFFQSNMDDENGYDLDELLDFADKVIMSAEAVIARRERELCIEFVESLNTQVAVALRDK
Ga0114964_1001473211	3300010157	Freshwater Lake	MLNEYLSENDVKQIFFQSKMDNPEGYDLDDLLDFADKVIMVATMDIARRERELCIEYVETLNTEVAKALREKRGAL
Ga0114960_100109376	3300010158	Freshwater Lake	KQVFFQSKMDNVEGYDFDELLDFADKVIMFASFNIARVERDMCIGFVKTLNVEVAQALKDKRGNL*
Ga0136235_100059313	3300010233	Freshwater	MLNEYLSENDIKQIFFQSKMDNPEGYDLDELLDFADKVIMVATMDIARRERELCIEYVETLNTEVAKALREKRGAL*
Ga0133913_119748934	3300010885	Freshwater Lake	MQNKYVSEEDIKQVFFQSKMDNVEGYDFDELLDFADKVIMFASFNIARVERDMCINFVKTLNAEVAQALKDKRGNL*
Ga0164297_100649591	3300013094	Freshwater	DIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNTEVAKALREKRGNL*
Ga0164297_103238933	3300013094	Freshwater	FFQCKMDDPNGYDFDELLDFADKVILTASFNVARAERELCIEFVESLNSEVAKALREKRGNL*
Ga0214194_1159382	3300020686	Freshwater	MQNKYLSENDIKQVFFQSKMDNPEGYDFDELLDFADKLIVTATMDIARRERELCIEFVESLNTEVAKALREKRGPL
Ga0214207_10025601	3300020716	Freshwater	MQNKYLSEDDVKQVFFQTKMDDPNGYDLDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKAL
Ga0214172_10358943	3300020733	Freshwater	MQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL
Ga0214206_10015012	3300021131	Freshwater	MQNKFLTENDIKQVFFSSNMDNFEGYDLDELLDFADKLILTAAEDIARRERELCIEFVSSLNTEVGKALREKRGNL
Ga0214206_10027226	3300021131	Freshwater	MQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNVARAERELCIEFVESLNSEVAKALREKRGNL
Ga0214164_10451392	3300021138	Freshwater	MQNKYLSEDDIKRVFFQSNMDKEEGYDFDELLDFADKVILTASFPIARTEREFCIEFVESLNVEVAKALREKRGSL
Ga0214164_11121442	3300021138	Freshwater	KMQNKYLSEDDVKQVFFQTKMDDPNGYDLDELLDFADKVILTASFNIARTERELCIEFVESLNTEVAKALREKRGNL
Ga0214166_11014641	3300021139	Freshwater	MDNPEGYDFDELLDFADKLIVTATMDIARRERELCIEFVESLNTEVAKALREKRGPL
Ga0214192_11028872	3300021142	Freshwater	MQNKYITEDDVKQIFFHSKMENVEGYDFDELLDFADKIVLYASFHVARTERELCIEFVESLNSEVAKALRDKRGNL
Ga0212088_102260213	3300022555	Freshwater Lake Hypolimnion	MLTNPYLSENDIKQVFFSSNMDNFEGYDLDELLDFADKLILTVAEDIAKRERELCIEFVSSLNTEVGKALRDKRGNL
Ga0212088_106434991	3300022555	Freshwater Lake Hypolimnion	MENIYLNENDIKQVFFQSNMDDENGYDLDELLDFADKVIMSAEAVIARRERELCIEFVESLNTQVA
Ga0248169_10143227	3300022602	Freshwater	MQNKYLSEDDIKQVFFQTKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALREKRGNL
Ga0248169_1119977	3300022602	Freshwater	MQNKYLSEDDVKQVFFQTKMDDPNGYDLDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALREKRGNL
Ga0208383_10206501	3300025357	Freshwater	DPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL
Ga0208383_10419031	3300025357	Freshwater	EHAMQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNVARAERELCIEFVESLNSEVAKALREKRGNL
Ga0207957_10025813	3300025372	Freshwater	MQNKYLTENDIKQIFFASQMDNVEGYDLDELLDFADKVILTVAEDVARRERELCIDFVKSLNTEVGKALREKRGNL
Ga0208259_10460412	3300025375	Freshwater	MQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTVAEDVARRERELCIDFVKSLNTEVAKALREKRGNL
Ga0208738_10482053	3300025379	Freshwater	PNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL
Ga0208738_10484712	3300025379	Freshwater	MQNKFLTENDIKQIFFASQMDNVEGYDLDELLDFADKVILTVAEDVARRERELCIDFVKSLNTEVAKALREKRGNL
Ga0207956_10052784	3300025385	Freshwater	CKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL
Ga0207959_10087773	3300025387	Freshwater	MQNKYLSEDDIKQVFFQTKMDDPNGYDLDELLDFADKVILTASFNIARTERELCIEFVESLNTEVAKALRDKRGPL
Ga0208740_10445733	3300025391	Freshwater	MQNKFLTENDIKQVFFSSNMDNFEGYDLDELLDFADKLILTAAEDIARRERELCIEFVSSLNTEVGKALREKRGNLXMPKSLSQNSL
Ga0208380_10016863	3300025392	Freshwater	MQNKYLTENDIKQIFFASQMDNVEGYDLDELLDFADKLILTAAEDIARRERELCIEFVSSLNTEVGKALREKRGNL
Ga0208387_10374611	3300025400	Freshwater	TEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL
Ga0207955_10582981	3300025401	Freshwater	MQNKYITEDDVKQIFFHSKMENVEGYDFDELLDFADKIVLYASFHVARTERELCIEFVESLNSEVAKALRDKRGNLXLPKS
Ga0208378_10148114	3300025407	Freshwater	QVFFQCKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL
Ga0208378_10290662	3300025407	Freshwater	MLNEYLSENDIKQVFFRSKMDNPEGYDFDELLDFADKLIVTATMDIARRERELCIEFVESLNTEVAKALREKRGPL
Ga0208378_10526622	3300025407	Freshwater	MQNKYITEEDVKQVFFQSKMDNPEGYDFDEILDFADKIVQFSAVAIARVERHHCIDFVGSLNSEVAKALLEKRGSL
Ga0208616_10522771	3300025417	Freshwater	PNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGHL
Ga0208739_100032115	3300025426	Freshwater	VKMQNKFLTENDIKQVFFSSNMDNFEGYDLDELLDFADKLILTAAEDIARRERELCIEFVSSLNTEVGKALREKRGNL
Ga0208739_10521653	3300025426	Freshwater	KMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKALRDKRGPL
Ga0208622_10563761	3300025430	Freshwater	MQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNIARTERELCIEFVESLNSEVAKAL
Ga0208744_10100841	3300025450	Freshwater	MQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNVARAERELCIEFVESLNS
Ga0208507_11157833	3300025648	Freshwater	KYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNVARAERELCIEFVESLNSEVAKALREKRGNL
Ga0208388_10405103	3300025778	Freshwater	QKEVKMQNKYLTENDIKQIFFASQMDNVEGYDLDELLDFADKVILTVAEDVARRERELCIDFVKSLNTEVGKALREKRGNL
Ga0208386_10247701	3300025781	Freshwater	FFQSKMDNPEGYDFDEILDFADKIVQFSAVAIARVERHHCIDFVGSLNSEVAKALLEKRGSL
Ga0208386_10400171	3300025781	Freshwater	MQNKYLSEDDIKQVFFQTKMDDPNGYDLDELLDFADKVILTASFNIARTERELCIEFVESLNTEVAKDLRDKRGPI
Ga0209188_100031055	3300027708	Freshwater Lake	MQNKYVSEEDIKQVFFQSKMDNVEGYDFDELLDFADKVIMFASFNIARVERDMCIGFVKTLNVEVAQALKDKRGNL
Ga0209088_100072161	3300027763	Freshwater Lake	SKMDNFEGYDFDELLDFADKVIMFASFEIARVERDMCINFVKTLNAEVAQALKDKRGNL
Ga0209777_105695972	3300027896	Freshwater Lake Sediment	MQNKYITEDDVKQVFFQCKMDNEEGYDFDELLDFADKIVQFSALRIARNERAHCIDFVNSLNVEVGKALSEKRGPL
Ga0209777_106010513	3300027896	Freshwater Lake Sediment	MQNKYITEEDVKQVFFQSKMDNPEGYDFDEILDFADKIVQFSAVAIARAERHHCIDFVGSLNSEVAKALLEKRGSL
Ga0209777_107824282	3300027896	Freshwater Lake Sediment	MQNKYLSENDIKQVFFQSNMNNPEGYDFDEILDFADKLIVVATLDIARRERELCIDFVNTLNTEVAKALREKRGPL
Ga0209299_12182381	3300027974	Freshwater Lake	MQNKYVTEEDIKQVFFQSKMDNFEGYDFDELLDFADKVIMFASFEIARVERDMCINFVKTLNAEVAQALKDKRGNL
Ga0316219_12402651	3300031759	Freshwater	DLDQLAEFSDKLVLFASFHIARTERELCIEFVESLNTEVAKALRDKRGPL
Ga0316218_11849843	3300032117	Freshwater	MQNKYLTEDDIKQVFFQCKMDDPNGYDFDELLDFADKVILTASFNIARAERELCIEFVESLNSQVAKALREKRGNL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098536

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences