Metagenome / Metatranscriptome Family F098549

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098549
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	65 residues
Representative Sequence	TEMPVFPKFWYTVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDAARPYIAKARKDVTQR
Number of Associated Samples	66
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.92 %
% of genes near scaffold ends (potentially truncated)	96.12 %
% of genes from short scaffolds (< 2000 bps)	93.20 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.136 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.981 % of family members)
Environment Ontology (ENVO)	Unclassified (59.223 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.398 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.87% β-sheet: 0.00% Coil/Unstructured: 52.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00816	Histone_HNS	13.59
PF11159	DUF2939	1.94
PF00589	Phage_integrase	1.94
PF01255	Prenyltransf	1.94
PF13467	RHH_4	0.97
PF13374	TPR_10	0.97
PF08734	GYD	0.97
PF13643	DUF4145	0.97
PF06411	HdeA	0.97
PF02798	GST_N	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2916	DNA-binding protein H-NS	Transcription [K]	13.59
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	1.94
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
All Organisms	root	All Organisms	37.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
cellular organisms	root	All Organisms → cellular organisms	37.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.36 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.36 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.94 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.94 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.94 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.97 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.94 %
Roseomonas harenae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas harenae	0.97 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12922220	Not Available	600	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10093259	Not Available	637	Open in IMG/M
3300005332\|Ga0066388_100530019	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300005332\|Ga0066388_103675060	Not Available	783	Open in IMG/M
3300005332\|Ga0066388_104544542	Not Available	706	Open in IMG/M
3300005332\|Ga0066388_107653000	Not Available	541	Open in IMG/M
3300005363\|Ga0008090_14680401	Not Available	524	Open in IMG/M
3300005363\|Ga0008090_15742014	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300005467\|Ga0070706_101406346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300005468\|Ga0070707_100390278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas harenae	1352	Open in IMG/M
3300005536\|Ga0070697_102054008	Not Available	512	Open in IMG/M
3300005764\|Ga0066903_100807170	Not Available	1679	Open in IMG/M
3300005764\|Ga0066903_101939679	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1129	Open in IMG/M
3300005764\|Ga0066903_102112415	Not Available	1084	Open in IMG/M
3300005764\|Ga0066903_102213425	Not Available	1060	Open in IMG/M
3300005764\|Ga0066903_103756321	Not Available	816	Open in IMG/M
3300005764\|Ga0066903_103800719	Not Available	811	Open in IMG/M
3300005764\|Ga0066903_105303073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300005764\|Ga0066903_106574093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300009090\|Ga0099827_11969809	Not Available	508	Open in IMG/M
3300009162\|Ga0075423_13219959	Not Available	500	Open in IMG/M
3300010047\|Ga0126382_10644825	Not Available	879	Open in IMG/M
3300010358\|Ga0126370_10737565	Not Available	870	Open in IMG/M
3300010359\|Ga0126376_11696095	Not Available	667	Open in IMG/M
3300010360\|Ga0126372_11810182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300010360\|Ga0126372_12987745	Not Available	524	Open in IMG/M
3300010361\|Ga0126378_12833262	Not Available	554	Open in IMG/M
3300010366\|Ga0126379_12287586	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300010366\|Ga0126379_12342774	Not Available	634	Open in IMG/M
3300010398\|Ga0126383_11144464	Not Available	868	Open in IMG/M
3300010398\|Ga0126383_11527546	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300010401\|Ga0134121_13301098	Not Available	500	Open in IMG/M
3300011271\|Ga0137393_11730505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300012202\|Ga0137363_10689442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300012211\|Ga0137377_11071649	Not Available	736	Open in IMG/M
3300012362\|Ga0137361_11726687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300012923\|Ga0137359_10327959	Not Available	1361	Open in IMG/M
3300012923\|Ga0137359_11203989	Not Available	645	Open in IMG/M
3300012923\|Ga0137359_11461409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300015371\|Ga0132258_11081843	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2027	Open in IMG/M
3300016270\|Ga0182036_10729788	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300016270\|Ga0182036_11137441	Not Available	647	Open in IMG/M
3300016294\|Ga0182041_11770419	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300016319\|Ga0182033_10143321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1832	Open in IMG/M
3300016319\|Ga0182033_10705247	Not Available	884	Open in IMG/M
3300016319\|Ga0182033_10711801	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300016319\|Ga0182033_11838476	Not Available	550	Open in IMG/M
3300016341\|Ga0182035_10320666	Not Available	1278	Open in IMG/M
3300016341\|Ga0182035_10536237	Not Available	1004	Open in IMG/M
3300016357\|Ga0182032_11656506	Not Available	557	Open in IMG/M
3300016371\|Ga0182034_10309145	Not Available	1270	Open in IMG/M
3300016422\|Ga0182039_10607625	Not Available	956	Open in IMG/M
3300016422\|Ga0182039_10713017	Not Available	885	Open in IMG/M
3300016445\|Ga0182038_10249668	Not Available	1426	Open in IMG/M
3300016445\|Ga0182038_10814578	Not Available	819	Open in IMG/M
3300026320\|Ga0209131_1114918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1402	Open in IMG/M
3300031546\|Ga0318538_10285597	Not Available	888	Open in IMG/M
3300031572\|Ga0318515_10252509	Not Available	946	Open in IMG/M
3300031573\|Ga0310915_10432362	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300031668\|Ga0318542_10540479	Not Available	607	Open in IMG/M
3300031679\|Ga0318561_10582470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300031681\|Ga0318572_10882576	Not Available	531	Open in IMG/M
3300031719\|Ga0306917_11046670	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300031744\|Ga0306918_10084431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2219	Open in IMG/M
3300031744\|Ga0306918_10384343	Not Available	1092	Open in IMG/M
3300031747\|Ga0318502_10296646	Not Available	950	Open in IMG/M
3300031748\|Ga0318492_10453034	Not Available	678	Open in IMG/M
3300031768\|Ga0318509_10742530	Not Available	544	Open in IMG/M
3300031770\|Ga0318521_10852346	Not Available	556	Open in IMG/M
3300031795\|Ga0318557_10207601	Not Available	894	Open in IMG/M
3300031796\|Ga0318576_10332401	Not Available	718	Open in IMG/M
3300031833\|Ga0310917_10499686	Not Available	827	Open in IMG/M
3300031879\|Ga0306919_10197083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1495	Open in IMG/M
3300031910\|Ga0306923_12058901	Not Available	577	Open in IMG/M
3300031910\|Ga0306923_12568981	Not Available	500	Open in IMG/M
3300031941\|Ga0310912_10570106	Not Available	881	Open in IMG/M
3300031941\|Ga0310912_11389393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300031942\|Ga0310916_10036902	All Organisms → cellular organisms → Bacteria	3645	Open in IMG/M
3300031942\|Ga0310916_11552596	Not Available	538	Open in IMG/M
3300031942\|Ga0310916_11666108	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031945\|Ga0310913_10534928	Not Available	832	Open in IMG/M
3300031946\|Ga0310910_10318148	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300031947\|Ga0310909_10017510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5092	Open in IMG/M
3300031947\|Ga0310909_10509755	Not Available	1008	Open in IMG/M
3300031947\|Ga0310909_11007392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300032001\|Ga0306922_11270472	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300032035\|Ga0310911_10284439	Not Available	950	Open in IMG/M
3300032041\|Ga0318549_10075710	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300032044\|Ga0318558_10105841	Not Available	1322	Open in IMG/M
3300032051\|Ga0318532_10279794	Not Available	592	Open in IMG/M
3300032060\|Ga0318505_10286964	Not Available	776	Open in IMG/M
3300032076\|Ga0306924_10818113	Not Available	1037	Open in IMG/M
3300032076\|Ga0306924_10970467	Not Available	935	Open in IMG/M
3300032091\|Ga0318577_10145374	Not Available	1127	Open in IMG/M
3300032261\|Ga0306920_101600913	Not Available	926	Open in IMG/M
3300032261\|Ga0306920_101817341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	859	Open in IMG/M
3300033289\|Ga0310914_10039489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3831	Open in IMG/M
3300033289\|Ga0310914_10121789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2270	Open in IMG/M
3300033289\|Ga0310914_10174998	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300033289\|Ga0310914_10257435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1569	Open in IMG/M
3300033289\|Ga0310914_10441327	Not Available	1178	Open in IMG/M
3300033289\|Ga0310914_10724625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	891	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.06%
Host-Associated	Host-Associated	1.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.06%
Plants	Host-Associated → Plants	1.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.50%
Loam	Environmental → Terrestrial → Soil → Loam	14.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.91%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_129222202	3300000789	Soil	EKNGGPALIDRVAPAGWLIERAFKARWPRCIDAAHPYIAKARKAGGS*
AF_2010_repII_A001DRAFT_100932591	3300000793	Forest Soil	LASACPDAYTEMPVFPKFWYVIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIEAARPYVAKARKNATQ*
Ga0066388_1005300191	3300005332	Tropical Forest Soil	VAVDAIEKNGGPSLIDHVTPAGWLIERAMKARWPRCIDAARPYIAKARKDAAQR*
Ga0066388_1036750602	3300005332	Tropical Forest Soil	AIEKNGGPSLIDRMAPAGWLIERAMKARWPRCIDAARPYIAKARKDAAQR*
Ga0066388_1045445421	3300005332	Tropical Forest Soil	SACPDAYTEMPVFPKFWYTVAVDAIEKNGGPTLIDRVAPAGWLIERTMKARWPHCIDIARPYIAKSRNGTQSNAPKQ*
Ga0066388_1076530001	3300005332	Tropical Forest Soil	LASACPDGYKEMPAFPDHWYIVAVEAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDYVAKARKDISPVTP*
Ga0008090_146804011	3300005363	Tropical Rainforest Soil	FPKFWYVIAVDAIEKNGGPTLIDRVAPASWLIERAMKASWPRCIEAARPYIAKARKDATQR*
Ga0008090_157420145	3300005363	Tropical Rainforest Soil	VEMPVFPKFWYVIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDVARPYVAKARNGTQSNAPKQ*
Ga0070706_1014063461	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	WYTVAVDAIENNGGPSLIDRVAPAGWLIERAMKARWPGCVDAARPYIAKARKDVTQR*
Ga0070707_1003902782	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	YVIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDAARPHIAKARKDVTQ*
Ga0070697_1020540081	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	DAYAEMPVFPKFWYVIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDAARPHIAKARKDVTQ*
Ga0066903_1008071704	3300005764	Tropical Forest Soil	VDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDVARPYVAKARKDVTQR*
Ga0066903_1019396791	3300005764	Tropical Forest Soil	KALASACPDAHTDMPVFPKFWYAVAVDAIEKNGGPSFIDRIAPAGWLIERAMKARWPRCIDVARPYIAKARKDVTQ*
Ga0066903_1021124152	3300005764	Tropical Forest Soil	DAKALASACPDAFTEMPVFPKFWYVIAVDAIEKNGGPSLIDRVTPAGWLIERAMKARWPRCIDVARPYIAKQR*
Ga0066903_1022134253	3300005764	Tropical Forest Soil	VFPKFWYAIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIEAARPYVTKARKM*
Ga0066903_1037563213	3300005764	Tropical Forest Soil	AAEMPVFPKFWYVIAVDAIEKNGGPTLIDRVAPASWLIERAMKASWPRCIDVARPYIAKARKDATQR*
Ga0066903_1038007193	3300005764	Tropical Forest Soil	MPVFPKFWYTVAVDAIDKNGGPWLIDGVAPAGWLIERAMKARWPRCIDVARPYIAKARKGVTQ*
Ga0066903_1053030731	3300005764	Tropical Forest Soil	SACPDAHTDMPVFPKFWYAVAVDAIEKNGGPSFIDRIAPAGWLIERAMKARWPRCIDVARPYIAKARQGVTQ*
Ga0066903_1065740931	3300005764	Tropical Forest Soil	LASACPDAYTEMPVFPKFWYVIAVDAIEKIGGPSLIDRVAPAGWLIERAMKARWPRCIDVARPYTAKALKDVTQ*
Ga0099827_119698091	3300009090	Vadose Zone Soil	EDAKALASACPAATEMPVFPKFWYVIAVEAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIEAARPYVAKARKDVTQR*
Ga0075423_132199591	3300009162	Populus Rhizosphere	KFWYTVAVDAIEKNGGPSLLDRVAPAGWLIERTMKARWPRCIDVARPYIAKGARKDVTQ*
Ga0126382_106448253	3300010047	Tropical Forest Soil	FPKFWYTVAVEAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIEAARPYVAKARKDVTQR*
Ga0126373_109900641	3300010048	Tropical Forest Soil	IAVDAIEKNGGPSLVDRVAPAGWLIERAMKARWPRCIDVARPYVAKARNGTQSNAPKQ*
Ga0126370_107375653	3300010358	Tropical Forest Soil	AYTDMPPFPKFWYTIAVDAIEKNGGPSLIDRVAPAGWLIDRAMKARWPRCIDVARPYVAKARQDVSPVR*
Ga0126376_116960951	3300010359	Tropical Forest Soil	PDAAELPVFPKFWYVIAVEGIETNGGPTLIDRVAPASWLIERAMKASWPRCILAARPYIEQARKEATQR*
Ga0126372_118101822	3300010360	Tropical Forest Soil	VAVDAIEKNGGPSFIDRIAPAGWLIERAMKARWPRCIDVARPYIAKARKDVTQ*
Ga0126372_129877452	3300010360	Tropical Forest Soil	AKALASACPDAYTDMPPFPKFWYTIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDVARPYVAKARQDVSPVR*
Ga0126378_128332621	3300010361	Tropical Forest Soil	YTEMPVFPKFWYVIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIEAARPYVAKARKNATQ*
Ga0126379_122875861	3300010366	Tropical Forest Soil	HWYIVAVEAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDYVAKARKDISPVTQ*
Ga0126379_123427741	3300010366	Tropical Forest Soil	HWYIVAVEAIEKNGGPSLIDRVAPAGWLIERAMNARWPRCIDYVAKAR*
Ga0126383_111444643	3300010398	Tropical Forest Soil	VDAIENNGGPSLIDRVAPAGWLIERAMKARWPRCVDAARPYIAKARKDVTQR*
Ga0126383_115275462	3300010398	Tropical Forest Soil	VAVDAIEKNGGPSLIDRVATAGWLIERTMKVRWPRCIDVARPYVAKARQDVTQR*
Ga0134121_133010981	3300010401	Terrestrial Soil	MPMFSIYWYYVAVDAIEKDGGPTLIDRVAPASWLIERAMKARWPRCVDAARPYIAKARKDVSRDPLPTTR*
Ga0137393_117305052	3300011271	Vadose Zone Soil	ASACPDAYAEMPVFPKFWYVIAVDAIEKNGGPSLIDRVTPAGWLIERAMKARWPHCIDVARPYIAKARKDQ*
Ga0137363_106894423	3300012202	Vadose Zone Soil	MPVLPNYWYGVIVDAIEKNGGPSLIDRVAPAGWLIERAAKARWPRCIDAARPYLKARKDVSPA
Ga0137377_110716492	3300012211	Vadose Zone Soil	GPSFIDRVAPAGWLIGRAIKARWPRCVDAARPYIVKARKDTQR*
Ga0137361_117266871	3300012362	Vadose Zone Soil	MPVFPKFWYTVAVDAIEKNGGPSLIDRVAPAVWLIERAMKARWPHCIDVARPYIAKARKDQ*
Ga0137359_103279593	3300012923	Vadose Zone Soil	LASACPDAYTEMPVFPKFWYTVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDAARPYVAKATNVTQSNAPKQ*
Ga0137359_112039891	3300012923	Vadose Zone Soil	VDAIEKNGGPSLVDHVAPATWLIERAMKARWPRCIDAARPYIDKARKAIPQR*
Ga0137359_114614091	3300012923	Vadose Zone Soil	VFPKFWYVIAVDAIEKNGGPSLIDRVTPAGWLIERAMKARWPRCIDVARPYIAKARKDVTR*
Ga0132258_110818434	3300015371	Arabidopsis Rhizosphere	VAVYSIQKNGGPSLIDRIAPAGWLIERAMKARWPRCIDVARPYIAKARKGITQ*
Ga0182036_107297883	3300016270	Soil	ALASACPDAYTEMPVFPKFWYVIAVDAIEKNGGPSLIDRVEPAGWLIERAMKARWPRCIEAARPYVAKARKNATQ
Ga0182036_111374412	3300016270	Soil	VAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDAARPYIAKARKDVTQR
Ga0182041_117704191	3300016294	Soil	GYKEMPAFPDHWYIVAVEAIEKNGGPSLIDRVTPAGWLIERAMKARWPRCVDYVAKARKDISPVTQ
Ga0182033_101433211	3300016319	Soil	ASACPDAYTEMPVFPKFWYTVAVDAIEKNGSPSSIDRVAPAGWLIERAMKARWPRCIDVARPHIAKARKDVTQR
Ga0182033_107052472	3300016319	Soil	FPKFWYTVAVDAIEKNGGPSLIDHVTPAGWLIERAMKARWPRCIDAARPYIAKARKDAAQ
Ga0182033_107118013	3300016319	Soil	SACPDGYKEMPAFPDHWYIVAVEAIEKNGGPSLIDRVTPAGWLIERAMKARWPRCVDYVAKARKDISPVTQ
Ga0182033_118384761	3300016319	Soil	YEEMPAFPDHWYIVAVEAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDYVAKARKDISPVRQ
Ga0182035_103206662	3300016341	Soil	LASACPDAYTEMPVFPKFWYVIAVDAIEKNGGPSLTDRVVPAGWLIERAMKARWPRCIDAARPYIAKARKDVTQR
Ga0182035_105362371	3300016341	Soil	ALASACPDAYTEMPVFPKFWYVIAVDAIEKNGGPSLIDRVAPTGWLIERAMKARWPRCIEAARPYVTKARKM
Ga0182032_116565061	3300016357	Soil	MPVFPKFWYVIAVDAIEKNGGPSLIDRVAPTGWLIERAMKARWPRCIEAARPYVTKARKM
Ga0182034_103091451	3300016371	Soil	ACPDAYTEMPVFPKFWYTVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDAARPYIAKARKDVTQR
Ga0182039_106076252	3300016422	Soil	PVFPKFWYTVAVDAIEKNGGPSLIDHVTPAGWLIERAMKARWPRCIDAARPYIAKARKDAAQR
Ga0182039_107130171	3300016422	Soil	DAKALASACPDAVEMPVFPKFWYVIAVDAIEKNGGPSLIDRVAPTGWLIERAMKARWPRCIEAARPYVTKARKM
Ga0182038_102496682	3300016445	Soil	VFPKFWYTVAVDAIEKNGGPSLIDHVTPAGWLIERAMKARWPRCIDAARPYIAKARKDAAQR
Ga0182038_108145782	3300016445	Soil	PKFWYTVAVDAIEKNGGPTLIDRVAPAGWLIERAMKARWPGRTDVARPYMAKARKDISQR
Ga0209131_11149185	3300026320	Grasslands Soil	FPKFWYTVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPHCIDVARPYIAKARKDQG
Ga0318538_102855972	3300031546	Soil	TEDAKALASACPDAFTEMPVFPKFWYTVAVDVIEKNGGPSLIDRVAPAGWLIERAMKARWPRCVEAARPYIAKARNGTQSNAPKQ
Ga0318515_102525093	3300031572	Soil	ATEDAKALASACPDAFTEMPVFPKFWYTVAVDVIEKNGGPSLIDRVAPAGWLIERAMKARWPRCVEAARPYIAKARNGTQSNAPKQ
Ga0310915_104323621	3300031573	Soil	VIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIEAARPYVAKARKNATQ
Ga0318542_105404791	3300031668	Soil	AKALASACPDAVDMPPFPKFWYVIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDVARPYVAKARQDVSPVR
Ga0318561_105824701	3300031679	Soil	AKALASACPDGYKEMPTFPQYWYRVAVETIEKTGGPTLIDRVAPASWLIERSMKARWPRCIEAARPYIAKARKDVTQR
Ga0318572_108825762	3300031681	Soil	TIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDVARPYVAKARQDVSPVR
Ga0306917_110466702	3300031719	Soil	YTVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCVDAARPYIAKARKDVSRDPLPTTH
Ga0306918_100844315	3300031744	Soil	PFPKFWYTIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDVARPYVAKARQDVSPVR
Ga0306918_103843433	3300031744	Soil	CPDRNTEMPLIAPAWYRVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDAARPYIAKARKDVTQR
Ga0318502_102966461	3300031747	Soil	VFPKFWYTVAVDAIEKNGGPTLIDRVAPAGWLIERAMKARWPRCTDVARPYIAKARKDISQR
Ga0318492_104530342	3300031748	Soil	DAYTEMPPFPKFWYTVAVDAIEKNGGPTLIDRVAPAGWLIERAMKARWPRCVDVARPHIAKARKDVTQR
Ga0318509_107425302	3300031768	Soil	AVDAIEKNGGPSLTDRVAPAGWLIERGMKARWPRCVDAARPYVAKARKDVTQSNAPKQ
Ga0318521_108523461	3300031770	Soil	TEMPVFPKFWYTVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDAARPYIAKARKDVTQR
Ga0318557_102076012	3300031795	Soil	EMPVFPKFWYTVAVDAIEKNGGPTLIDRVAPAGWLIERAMKARWPRCTDVARPYIAKARKDISQR
Ga0318576_103324011	3300031796	Soil	ACPDAYTEMPVFPKFWYTVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCTDVARPYIAKARKDISQR
Ga0310917_104996862	3300031833	Soil	KALASACPDAYADMPVFPKFWYTVAVDTIEKNGGPSLIDRVAPAGRLIERAMKARWPRCIEAARPYVAKARKDVTRR
Ga0306919_101970833	3300031879	Soil	TLAIACPDAYTEMPVFPKFWYTVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDAARPYIAKARKDVTQR
Ga0306923_120589012	3300031910	Soil	PDAYADMPVFPKFWYTVAVDTIEKNGGPSLIDRVAPAGRLIERAMKARWPRCIEAARPYVAKARKDVTRR
Ga0306923_125689811	3300031910	Soil	PDHWYIVAVEAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDYVAKARKDISPVRQ
Ga0310912_105701064	3300031941	Soil	EMPVFPKFWYTVAVDAIENNGGPSLIDHVAPAGWLIERAMKARWPGCIDAARPYIAEARKAGGS
Ga0310912_113893931	3300031941	Soil	KFWYTVAVDAIEKNGGPSLIDRVVPPGWLIQRAMKARWPRCIDAARPYIAKARKDVTQR
Ga0310916_100369029	3300031942	Soil	DHWYIVAVEAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCVDYVAKARKDISPVTQ
Ga0310916_115525962	3300031942	Soil	ACPDAVEMPVFPKFWYVIAVDAIEKNGGPSLIDRVAPTGWLIERAMKARWPRCIEAARPYVTKARKM
Ga0310916_116661081	3300031942	Soil	YIVAVEAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDYVAKARKDISPVTQ
Ga0310913_105349282	3300031945	Soil	AWYRVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDAARPYIAKARKDVTQR
Ga0310910_103181483	3300031946	Soil	SACPDASTEMPVFPKFWYTVAVDAIEKNGGPSSIDRVAPAGWLIERAMKARWPRCIDVARPHIAKARKDVTQR
Ga0310909_100175101	3300031947	Soil	AYAEMPVFPKFWYTVAVDAIENNGGPSLIDHVAPAGWLIERAMKARWPGCIDAARPYIAEARKAGGS
Ga0310909_105097551	3300031947	Soil	APADAKALASACPDRNTEMPLIAPAWYRVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDAARPYIAKARKDVTQR
Ga0310909_110073923	3300031947	Soil	ACPDAYAEMPVFPKFWYDIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDVARPYIAKARKDVTQ
Ga0306922_112704722	3300032001	Soil	AYTEMPVFPKFWYVIAVDAIEKNGGSTLIDQVAPAGWLIERAMKARWPRCIEAARPYVAKARTDGTQ
Ga0310911_102844392	3300032035	Soil	ACPDAFTEMPVFPKFWYTVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDVARPYVAKARQDVSPVR
Ga0318549_100757101	3300032041	Soil	TLASACPDAFTEMPVFPKFWYTVAVDVIEKNGGPSLIDRVAPAGWLIERAMKARWPRCVEAARPYIAKARNGTQSNAPKQ
Ga0318558_101058413	3300032044	Soil	DHWYIVAVEAIEKNGGPSLIDRVAPARWLIERAMKARWPRCTDVARPYIAKARKDISQR
Ga0318532_102797941	3300032051	Soil	AYTEMPVFPKFWYVIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIEAARPYVAKARKNATQ
Ga0318505_102869641	3300032060	Soil	FWYVIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDVARPYVAKARQDVSPVR
Ga0306924_108181133	3300032076	Soil	ATEDAKALASACPDAVEMPVFPKFWYVIAVDAIEKNGGPSLIDRVAPTGWLIERAMKARWPRCIEAARPYVTKARKM
Ga0306924_109704671	3300032076	Soil	AIEKNGGPTLIDRVAPAGWLIERAMKARWPRCVDVARPHIAKARKDVTQR
Ga0318577_101453741	3300032091	Soil	WYTVAVDTIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIEAARPYVAKARKDVTRR
Ga0306920_1016009133	3300032261	Soil	LASACPDAFTEMPVFPKFWYTVAVDVIEKNGGPSLIDRVAPAGWLIERAMKARWPRCVEAARPYIARARNGTQSNAPKQ
Ga0306920_1018173411	3300032261	Soil	PDAYTEMPPFPKFWYTVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDVARPYIAKARKDISQR
Ga0310914_100394897	3300033289	Soil	EDAKALASACPDAVEMPVFPKFWYVIAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIEAARPYVAKARKNATQ
Ga0310914_101217891	3300033289	Soil	KFWYTVAVDAIENNGGPSLIDHVAPAGWLIERAMKARWPGCIDAARPYIAEARKAGGS
Ga0310914_101749981	3300033289	Soil	EAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCVDYVAKARKDISPVTQ
Ga0310914_102574351	3300033289	Soil	SACPDAYADMPVFPKFWYTVAVDTIEKNGGPSLIDRVAPAGRLIERAMKARWPRCIEAARPYVAKARKDVTRR
Ga0310914_104413273	3300033289	Soil	PDRNTEMPLIAPAWYRVAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDAARPYIAKARKDVTQR
Ga0310914_107246252	3300033289	Soil	IAVDAIEKNGGPSLIDRVAPAGWLIERAMKARWPRCIDVARPYVAKARKDVTQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098549

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences