Metagenome Family F098561

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F098561
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	118 residues
Representative Sequence	MAITLGKDCSIMLDGGYIFSARNVTLTESARTIDVNPYGSRYAGVYSTGYECSVSVELNDAADLGTAFERMHTGGTFTVSGGAGGFSFLAVMTGISETDPIDGVATFTLEGRMTDPRLAR
Number of Associated Samples	52
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	92.23 %
% of genes near scaffold ends (potentially truncated)	13.59 %
% of genes from short scaffolds (< 2000 bps)	52.43 %
Associated GOLD sequencing projects	44
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (62.136 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (61.165 % of family members)
Environment Ontology (ENVO)	Unclassified (87.379 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (80.583 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (beta-barrel)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.43% β-sheet: 47.30% Coil/Unstructured: 45.27%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF10145	PhageMin_Tail	12.62
PF00041	fn3	4.85
PF05866	RusA	2.91
PF00589	Phage_integrase	2.91
PF02562	PhoH	1.94
PF12789	PTR	1.94
PF13385	Laminin_G_3	1.94
PF05876	GpA_ATPase	0.97
PF10124	Mu-like_gpT	0.97
PF09956	DUF2190	0.97
PF01726	LexA_DNA_bind	0.97
PF02768	DNA_pol3_beta_3	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	2.91
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	1.94
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	1.94
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	0.97
COG5525	Phage terminase, large subunit GpA	Mobilome: prophages, transposons [X]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
All Organisms	root	All Organisms	37.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
cellular organisms	root	All Organisms → cellular organisms	20.39 %
Viruses	superkingdom	All Organisms → Viruses	17.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.50 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.85 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.50 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	4.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.97 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.97 %
Oligoflexia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.50 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1.94 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.97 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.97 %
Bdellovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales	0.97 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.50 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	1.94 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.97 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.97 %
Bdellovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → Bdellovibrionaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.50 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	1.94 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.97 %
unclassified Pseudobdellovibrionaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → Bdellovibrionaceae → unclassified Pseudobdellovibrionaceae	0.97 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.50 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	1.94 %
Pseudobdellovibrionaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → Bdellovibrionaceae → unclassified Pseudobdellovibrionaceae → Pseudobdellovibrionaceae bacterium	0.97 %
Rubinisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Rubinisphaera	0.97 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.50 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	1.94 %
Rubinisphaera italica	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Rubinisphaera → Rubinisphaera italica	0.97 %
Pseudobdellovibrionaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → Bdellovibrionaceae → unclassified Pseudobdellovibrionaceae → Pseudobdellovibrionaceae bacterium	0.97 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.97 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002835\|B570J40625_100023539	All Organisms → cellular organisms → Bacteria	10185	Open in IMG/M
3300002835\|B570J40625_100319008	Not Available	1561	Open in IMG/M
3300002835\|B570J40625_100561235	Not Available	1055	Open in IMG/M
3300003490\|JGI25926J51410_1001708	Not Available	4362	Open in IMG/M
3300004804\|Ga0007796_10068417	Not Available	1136	Open in IMG/M
3300005805\|Ga0079957_1300877	Not Available	722	Open in IMG/M
3300009068\|Ga0114973_10122357	All Organisms → Viruses → Predicted Viral	1463	Open in IMG/M
3300009068\|Ga0114973_10303786	Not Available	850	Open in IMG/M
3300009154\|Ga0114963_10003262	All Organisms → cellular organisms → Bacteria	11051	Open in IMG/M
3300009154\|Ga0114963_10010153	All Organisms → cellular organisms → Bacteria	6392	Open in IMG/M
3300009154\|Ga0114963_10025275	All Organisms → cellular organisms → Bacteria	3936	Open in IMG/M
3300009154\|Ga0114963_10072785	Not Available	2145	Open in IMG/M
3300009154\|Ga0114963_10149433	Not Available	1388	Open in IMG/M
3300009154\|Ga0114963_10170215	Not Available	1279	Open in IMG/M
3300009154\|Ga0114963_10267698	Not Available	963	Open in IMG/M
3300009154\|Ga0114963_10544440	Not Available	613	Open in IMG/M
3300009154\|Ga0114963_10561990	Not Available	601	Open in IMG/M
3300009154\|Ga0114963_10628210	Not Available	561	Open in IMG/M
3300009155\|Ga0114968_10000760	Not Available	24236	Open in IMG/M
3300009155\|Ga0114968_10001167	Not Available	20036	Open in IMG/M
3300009155\|Ga0114968_10005119	Not Available	9737	Open in IMG/M
3300009155\|Ga0114968_10090469	Not Available	1885	Open in IMG/M
3300009182\|Ga0114959_10018586	Not Available	4481	Open in IMG/M
3300009182\|Ga0114959_10029161	All Organisms → cellular organisms → Bacteria	3382	Open in IMG/M
3300009182\|Ga0114959_10069098	All Organisms → Viruses → Predicted Viral	1994	Open in IMG/M
3300009184\|Ga0114976_10141717	All Organisms → Viruses → Predicted Viral	1351	Open in IMG/M
3300009184\|Ga0114976_10145891	Not Available	1328	Open in IMG/M
3300010157\|Ga0114964_10130784	Not Available	1228	Open in IMG/M
3300010157\|Ga0114964_10138558	All Organisms → Viruses → Predicted Viral	1188	Open in IMG/M
3300010157\|Ga0114964_10373541	Not Available	673	Open in IMG/M
3300010160\|Ga0114967_10002090	All Organisms → cellular organisms → Bacteria	16755	Open in IMG/M
3300010334\|Ga0136644_10000539	Not Available	30213	Open in IMG/M
3300010334\|Ga0136644_10003891	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	11117	Open in IMG/M
3300010334\|Ga0136644_10083067	All Organisms → Viruses → Predicted Viral	2011	Open in IMG/M
3300010334\|Ga0136644_10446449	Not Available	728	Open in IMG/M
3300010354\|Ga0129333_10010523	Not Available	8753	Open in IMG/M
3300010885\|Ga0133913_10390532	Not Available	3679	Open in IMG/M
3300010885\|Ga0133913_10809984	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	2440	Open in IMG/M
3300010885\|Ga0133913_10954152	Not Available	2222	Open in IMG/M
3300010885\|Ga0133913_13406882	Not Available	1041	Open in IMG/M
3300013004\|Ga0164293_10137962	All Organisms → Viruses → Predicted Viral	1826	Open in IMG/M
3300013005\|Ga0164292_10412686	Not Available	899	Open in IMG/M
3300013006\|Ga0164294_10239313	Not Available	1274	Open in IMG/M
3300013286\|Ga0136641_1000253	Not Available	22563	Open in IMG/M
3300013286\|Ga0136641_1005598	All Organisms → cellular organisms → Bacteria	4561	Open in IMG/M
3300018868\|Ga0187844_10362427	Not Available	597	Open in IMG/M
3300020526\|Ga0208085_1015122	All Organisms → Viruses → Predicted Viral	1142	Open in IMG/M
3300021340\|Ga0194041_10113678	Not Available	838	Open in IMG/M
3300021438\|Ga0213920_1016843	Not Available	1904	Open in IMG/M
3300023174\|Ga0214921_10205186	All Organisms → Viruses → Predicted Viral	1225	Open in IMG/M
3300023179\|Ga0214923_10003475	Not Available	19746	Open in IMG/M
3300023184\|Ga0214919_10070176	All Organisms → cellular organisms → Bacteria	3169	Open in IMG/M
3300025606\|Ga0207954_1099647	Not Available	720	Open in IMG/M
3300027114\|Ga0208009_1012442	Not Available	2056	Open in IMG/M
3300027503\|Ga0255182_1007269	All Organisms → Viruses → Predicted Viral	3996	Open in IMG/M
3300027518\|Ga0208787_1121965	Not Available	607	Open in IMG/M
3300027708\|Ga0209188_1055865	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	1730	Open in IMG/M
3300027708\|Ga0209188_1075902	All Organisms → Viruses → Predicted Viral	1408	Open in IMG/M
3300027734\|Ga0209087_1076696	Not Available	1460	Open in IMG/M
3300027741\|Ga0209085_1000452	Not Available	30134	Open in IMG/M
3300027741\|Ga0209085_1001235	Not Available	16261	Open in IMG/M
3300027741\|Ga0209085_1001624	All Organisms → cellular organisms → Bacteria	13614	Open in IMG/M
3300027741\|Ga0209085_1001976	All Organisms → cellular organisms → Bacteria	12046	Open in IMG/M
3300027741\|Ga0209085_1002343	All Organisms → cellular organisms → Bacteria	10826	Open in IMG/M
3300027741\|Ga0209085_1005206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → Bdellovibrionaceae → unclassified Pseudobdellovibrionaceae → Pseudobdellovibrionaceae bacterium	6872	Open in IMG/M
3300027741\|Ga0209085_1015063	All Organisms → Viruses → Predicted Viral	3797	Open in IMG/M
3300027741\|Ga0209085_1023616	Not Available	2947	Open in IMG/M
3300027741\|Ga0209085_1039490	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2211	Open in IMG/M
3300027741\|Ga0209085_1056306	All Organisms → Viruses → Predicted Viral	1809	Open in IMG/M
3300027741\|Ga0209085_1114774	Not Available	1171	Open in IMG/M
3300027741\|Ga0209085_1171974	Not Available	899	Open in IMG/M
3300027747\|Ga0209189_1000400	Not Available	36376	Open in IMG/M
3300027747\|Ga0209189_1004896	Not Available	8578	Open in IMG/M
3300027747\|Ga0209189_1038086	All Organisms → Viruses → Predicted Viral	2414	Open in IMG/M
3300027747\|Ga0209189_1066410	All Organisms → Viruses → Predicted Viral	1694	Open in IMG/M
3300027747\|Ga0209189_1187633	Not Available	860	Open in IMG/M
3300027777\|Ga0209829_10262981	Not Available	720	Open in IMG/M
3300027963\|Ga0209400_1000311	Not Available	42155	Open in IMG/M
3300027963\|Ga0209400_1000370	Not Available	38794	Open in IMG/M
3300027963\|Ga0209400_1000780	Not Available	27659	Open in IMG/M
3300027963\|Ga0209400_1325620	Not Available	578	Open in IMG/M
3300027971\|Ga0209401_1013184	Not Available	4478	Open in IMG/M
3300027971\|Ga0209401_1184246	Not Available	790	Open in IMG/M
3300027973\|Ga0209298_10000164	All Organisms → cellular organisms → Bacteria	40767	Open in IMG/M
3300028393\|Ga0304728_1024527	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Rubinisphaera → Rubinisphaera italica	2705	Open in IMG/M
3300028394\|Ga0304730_1000826	All Organisms → cellular organisms → Bacteria	25210	Open in IMG/M
3300033978\|Ga0334977_0393436	Not Available	648	Open in IMG/M
3300033993\|Ga0334994_0137577	Not Available	1389	Open in IMG/M
3300034018\|Ga0334985_0002503	All Organisms → cellular organisms → Bacteria	14809	Open in IMG/M
3300034021\|Ga0335004_0225898	All Organisms → Viruses → Predicted Viral	1151	Open in IMG/M
3300034021\|Ga0335004_0589618	Not Available	591	Open in IMG/M
3300034061\|Ga0334987_0113550	Not Available	2055	Open in IMG/M
3300034062\|Ga0334995_0002614	Not Available	18751	Open in IMG/M
3300034066\|Ga0335019_0010830	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6251	Open in IMG/M
3300034104\|Ga0335031_0119053	Not Available	1849	Open in IMG/M
3300034104\|Ga0335031_0403343	Not Available	858	Open in IMG/M
3300034106\|Ga0335036_0032890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4069	Open in IMG/M
3300034106\|Ga0335036_0152237	Not Available	1645	Open in IMG/M
3300034106\|Ga0335036_0198213	All Organisms → Viruses → Predicted Viral	1393	Open in IMG/M
3300034118\|Ga0335053_0410716	Not Available	819	Open in IMG/M
3300034120\|Ga0335056_0718169	Not Available	505	Open in IMG/M
3300034122\|Ga0335060_0239065	All Organisms → Viruses → Predicted Viral	1016	Open in IMG/M
3300034279\|Ga0335052_0507579	Not Available	622	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.06%
Terrestrial	Environmental → Terrestrial	1.94%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	97.09%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.94%
Marine	Environmental → Aquatic → Marine	0.97%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	88.35%
Lentic	Environmental → Aquatic → Freshwater → Lentic	6.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.94%
River	Environmental → Aquatic → Freshwater → River	0.97%
Creek	Environmental → Aquatic → Freshwater → Creek	0.97%
Coastal	Environmental → Aquatic → Marine → Coastal	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	88.35%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	3.88%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.91%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	61.17%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	22.33%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.91%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.91%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.91%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.94%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.97%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.97%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.97%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.97%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.97%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.97%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300004804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300018868	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_50	Environmental	Open in IMG/M
3300020526	Freshwater microbial communities from Lake Mendota, WI - 21JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021340	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-9m	Environmental	Open in IMG/M
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300025606	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M (SPAdes)	Environmental	Open in IMG/M
3300027114	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)	Environmental	Open in IMG/M
3300027503	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8d	Environmental	Open in IMG/M
3300027518	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11 (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028393	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG (v2)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1000235392	3300002835	Freshwater	VAITLGKDCSIMLDGGYIASARNVTLTESARTIDVNPYGSRYAATYSTGYDCAVSVELNNVSDLGTAFEKMHTGGTFTVYGGAAGFSFLAVMTGISESDPIDGVATFTLEGRMTDPRLAR
B570J40625_1003190082	3300002835	Freshwater	MAITLGKDCTITLDGGRIFSARNVTLTESARTIDVNPYGSRYAATYSTGYECTVSVELNDDADLGTAFQKMHTGGTFQVAGGAAGFGFLAVMTGISETDPIDGVATFQLEGRMTDPRLVR
B570J40625_1005612351	3300002835	Freshwater	MAITLGKDCSIMLDGGYIFSARNVTLTESARTIDVNPYGSRYAGVYSTGYECSVSVELNDAADLGTAFERMHTGGTFTVNGGAGGFSFLAVMTGISETDPIDGVATFTLEGRMTDPRL
JGI25926J51410_10017083	3300003490	Freshwater Lake	MAITLGKDCSIVLDGGFIRSARNVTLTESARTIEVNPYGSRYAATYSTGYECTVSVELNDAADLGTAFQKMHSGGTFQVIGGAAGFSFLAVLTGISETDPIDGVSVFTLEGKMTDPRLVR
Ga0007796_100684172	3300004804	Freshwater	MAITLGKDCSISLGGTIASARSVTLSESARTIDVNPYGSRYSCVYQTGYECSVSVELNDSADLKSAFYNMHTGMPFQVSGGAAGFSFKAVMTAISESDPIDGVATFTLEGKMTDPRLNRDSG*
Ga0079957_13008772	3300005805	Lake	VAITLGKDCSIMLDGGYIFSARNVTLTESARTIDVNPYGSRYAGVYSTGYECSVSVELNDAADLGTAFYRMHTGGTFTVNGGASGFSFLAVMTGISETDPIDGVATFTLEGRMTDPRLVR
Ga0114973_101223574	3300009068	Freshwater Lake	MSITLGKDCSIALDGGYIASARNVTLTESARTIDVNAYGSRYVSVYHTGYDCSVSVELNDPAELGSAFSRMHTGTPFTVYGGAGGFSFLAVLTGISETDPIDGVVTCTLEAKMTDPSLTRG*
Ga0114973_103037862	3300009068	Freshwater Lake	MAITLGKDCTISFDGSIITSARNVTLTESARTIDVNRFGSRYAATYSTGYECSVSVELNDSEDLASLFTKMHTGSTFAVKGGAGNFLFTAVMTGISETDTIENVATFTIEGKMTDPKLTRD*
Ga0114963_100032625	3300009154	Freshwater Lake	MAITLGKDCSIMLDGGYIASARNVTLTESARTIDVNAYGSRYSAAYSTGYECTVSVELNNPAEILAAFSRMHTGTPFTVYGGAAGFSFLAVLTGISETDPIDGVVTCTLEAKMTDPRLLRQS*
Ga0114963_100101534	3300009154	Freshwater Lake	MAITLGKDCTISIGGNISGARNVTLTETARTIDINPFGSREASVYQTGYDCSVSVELNDSSALSSVFSSMHTGTPVQVSGGAGSFSFLAVITGISESDPIDGVATFTIDAKMTDQSLQRSGGNA*
Ga0114963_100252754	3300009154	Freshwater Lake	MAITLGKDCSIMLDGGYIASARNVTLTESARTIDVNAYGSRYSATYSTGYECTVSVELNDPAEIFSAFSRMHTGTPFTVYGGAAGFSFLAVLTGISETDPIDGVVTCTLEAKMTDPRLTRG*
Ga0114963_100727854	3300009154	Freshwater Lake	MAITLGKDCTIRLDGGAITSARNVTLTESARTIDVNPYGSRYAATYSTGYECTVSVELLDADDLGTAFQKMHKGGTFEVSGGAAGFSFLAVLTGISETDPIDGVATFVLEGKMTDPRLVRE*
Ga0114963_101494333	3300009154	Freshwater Lake	MAITLGKDCRISIGGTVSGVRNVTLTETARTIDINPFGSREASVYQTGYDCSVSVELNDSEALGDAFSNMHTGTPVQVSGGAGGFNFLAVITGISENDPIDGVATFTIDAKMTDRSLTRGGA*
Ga0114963_101702153	3300009154	Freshwater Lake	MAITLGKDCSISLDGGYIASARNVTLTESARTIDVNPYGSRYAATYSTGYECTVSVELNDVAGLGTAFERMHTGGTFTVYGGAAGFAFLAVLTSISESDPVDGVATFTLEGKMTDPRLVR
Ga0114963_102676983	3300009154	Freshwater Lake	MAITLGKDCSVVLDGGYIASARNVTLTESARTIDVNPYGSRYAATYSTGYECTVSVELNDAADLGTAFQKMHTGGTFQVFGGAAGFSFLAVLTGINESDPVDGVATFTLEGKMTDPRLARE*
Ga0114963_105444401	3300009154	Freshwater Lake	LAIVLGKDCTITLAGGVILSARNVTLTESARTIEINEYGSRYSSVYSTGYECSVSVEFNDPADLGTAFNLMHTGSSFAVSGGASGFSFQAVMTGIGE
Ga0114963_105619901	3300009154	Freshwater Lake	VAIVLGKDCTITFAGGVILSARNVTLTESARTIEINEYGSRYSSVYSTGYECSVSVEFNDPADLGTAFNLMHTGSSFAVSGGASGFSFQAVMTGIGE
Ga0114963_106282102	3300009154	Freshwater Lake	DVQRDRQGVLMAITLGKDCTIQLDGGYITSARNVTLTESARTIDVNPYGSRYAGVYSTGYECSVSVELNDSEDLGTAFAKMHTGGTFTVFGGASGFQFIAVLTGISETDPIDGVATFTLEGKMTDPRLAR*
Ga0114968_1000076033	3300009155	Freshwater Lake	MAITLGKDCTIRLDGGTITSARNVTLTESARTIDVNPYGSRYAATYSTGYECTVSVELNDAGDLGTAFQKMHKGGTFEVSGGAAGFSFLAVLTGISETDPIDGVATFVLEGKMTDPRLVRE*
Ga0114968_100011672	3300009155	Freshwater Lake	MAITLGKDCTISIGGTVSGVRNVTLTETARTIDINPFGSREASVYQTGYDCSVSVELNDSAALGNAFSNMHNGTPVQVSGGAGSFSFLAVITGISESDPIDGVATFTIDGKMTDRSLTRGGA*
Ga0114968_100051192	3300009155	Freshwater Lake	MAITLGKDCSIMLDGGYIASARNVTLTESARTIDVNAYGSRYSAAYSTGYECTVSVELNDPAEIFSAFSRMHTGTPFTVYGGAAGFSFLAVLTGISETDPIDGVVTCTLEAKMTDPRLTRG*
Ga0114968_100904692	3300009155	Freshwater Lake	MAITLGKDCSISLDGGLIASARNVTLTESARTIDVNPYGSRYSATYSTGYECTVSVELNDPAELGSAFYRMHTGTPFTVYGGISGFSFLAVLTGISETDPIDGVVTCTLEAKMTDPRLTRD*
Ga0114959_100185864	3300009182	Freshwater Lake	MAITLGKDCTISIGGAVTGVRNVTLTETARTIDINPFGSREASVYSTGYDCSVSVELNDSESLDNAFLNMHSGTPVQVTGGAGGFSFLAVITGISESDPIDGVATFTIDAKMTDRSLTRGN*
Ga0114959_100291613	3300009182	Freshwater Lake	MAITLGKDCTIMLDGGTITSARNVTLTESARTIDVNPYGSRCAATYSTGYECTVSVELNDVSGLGTAFTKMHTGGTFTVVGGAAGFSFLAVLTGISETDPIDGVATFTLEGKMTDPNLVRN*
Ga0114959_100690981	3300009182	Freshwater Lake	VAITLGKDCTISLDGGYIASARNVTLTESARTIDVNPYGSRYAATYSTGYDCTVTVELNNAYDLGTAFEKMHTGGTFTVYGGAAGFSFLAVMTGISESDPIDGVASFTLEGKMTDPRLTR
Ga0114976_101417171	3300009184	Freshwater Lake	MAITLGKDCTIVLDGGYIASARNVTLTESARTIDVNPYGSRYAATYSTGYDCTVSVELNDVAGLGTAFERMHTGGTFTVYGGAAGFAFLAVMTGISESDPIDGVATFTIQGQMTDPRLVR
Ga0114976_101458912	3300009184	Freshwater Lake	MAITLGKDCTIRLDGGTITSARNVTLTESARTIDVNPYGSRYAATYSTGYECTVSVELNDAGDLGTAFQKMHKGGTFEVRGGAAGFSFLAVLTGISETDPIDGVSSFVLEGKMTDPRLVRE*
Ga0114964_101307842	3300010157	Freshwater Lake	MAIALGKDCTVSFAGSTIYSARNVTLTESARTIDINPYGSRYAAVYSTGYECSVSVEFNDGDDLGSAFSLMHTGGTFQVAGGQGGFSFIAVMTSITETDPIDGVATFVVEGRMTDPRLTR
Ga0114964_101385582	3300010157	Freshwater Lake	VAIVLGKDCTITFAGGVILSARNVTLTESARTIEINEYGSRYSSVYSTGYECSVSVEFNDPADLGTAFNLMHTGSSFAVSGGASGFSFQAVMTGIGESDPIDGVATCTIEARMTHPTLRAS*
Ga0114964_103735412	3300010157	Freshwater Lake	MAITLGKECTISLDGGYIASARNVTLTESARTIEVNPYGSRYAATYSTGYECTVSVELNDVEGLGTAFQRMHTGGTFMVNGGAAGFSFLAVLTGITETDPVDGVATFTLEGKMTDPRLVR
Ga0114967_1000209011	3300010160	Freshwater Lake	MAITLGKDCSISLGGTIASARSVTLSESARTIDVNPYGSRYSCVYQTGYECSVSVELNDSADLKSAFDNMHTGMPFQVSGGSAGFSFKAVMTAISESDPIDGVATFTLEGKMTDTRLTRGSG*
Ga0136644_1000053918	3300010334	Freshwater Lake	MAITLGKDCRISIGGNVSGARNVTLTETARTIDINPFGSREASVYQTGYDCSVSVELNDSEALGDAFSNMHTGTPVQVSGGAGGFNFLAVITGISENDPIDGVATFTIDAKMTDRSLTRGGA*
Ga0136644_100038916	3300010334	Freshwater Lake	MAITLGKDCSINFGGQIASARNVTLTESARTIDVNAYGSRVAGVYSTGYDCMVSVELNDPEDLGDSFASMHTGTTFTVTGGAGSFSFLAVMTGISETDPLDGVATFTLEGRMTDPGLGRT
Ga0136644_100830672	3300010334	Freshwater Lake	VAIVLGKDCTITLAGGVILSARNVTLTESARTIEINEYGSRYSSVYSTGYECSVSVEFNDPADLGTAFNLMHTGSSFAVSGGASGFSFQAVMTGIGESDPIDGVATCTIEARMTHPTLRAS*
Ga0136644_104464491	3300010334	Freshwater Lake	SARSVTLSESARTIDVNAYGSRYSSVYQTGYECSVSVELNDSDDLGAAFSNMHTGATFTVSGGAGGFSFMAVMTAISESDPIDGVATYTLEGKMTDPRLTRSSG*
Ga0129333_100105239	3300010354	Freshwater To Marine Saline Gradient	MLGKDCSITLDNGVIASARNVTLSESARTIEINEFGSRYSAVYSTGYDCSVSVELNDPAEVGSAFSRLHAGTSFAVSGGAAGFNFRAVVTGITESDPIDGVVTCTIEAKMTHPSLRST*
Ga0133913_103905328	3300010885	Freshwater Lake	MAIALGKDCTVSFAGSTIYSARNVTLTESARTIDINPYGSRYAAVYSTGYECSVSVEFNDGDDLGSAFSLMHTGGTFQVAGGQGGFSFTAVMTSITETDPIDGVATFVVEGRMTDPRLTR
Ga0133913_108099843	3300010885	Freshwater Lake	MAITLGKDCTITMDGGTITSARNVQLTETARTIEIGQYGSREAAVYSTGYECAVSVELNDVSEIMGGFNRIHSGTSFTVSGGAGGFSFEAIVMSISESDPIDGVVSCTIEGKMTKQGLRTG*
Ga0133913_109541522	3300010885	Freshwater Lake	MAITLGKDCTISLDGGTITSARNVTLTESARTIDVNAYGSRYAATYSTGYECTVSVELNDSADLGTAFQKMHSGETFQVFGGAAGFSFLAVMTGISESDPVDGVSTFTIEGKMTDPRLVR
Ga0133913_134068822	3300010885	Freshwater Lake	MAITLGKDCAISIGGNISGVRNVTLTETARTIDINPFGSREASVYQTGYDCSVSIELNDSGGMSSLFANMHTGTPVQVSGGAGSFSFLAVITGISESDPINGVAMFTIEAKMTDGSLMRGA*
Ga0164293_101379622	3300013004	Freshwater	VAITLGKDCSIVLDGGYIASARNVMLTESARTIDVNPYGSRYAATYSTGYDCTVSVELNDAAGLGTAFQKMHTGGTFTVFGGAAGFSFLAVMTGISESDPVDGVATFTLEGKMTDPRLVRE*
Ga0164292_104126862	3300013005	Freshwater	VAITLGKDCSIVLDGGYIASARNVMLTESARTIDVNPYGSRYAATYSTGYDCTVSVELNDAAGLGTAFQKMHSGGTFTVSGGAAGFSFLAVMTGISETDPIDGIASFVLEGKMTDPRLARE*
Ga0164294_102393133	3300013006	Freshwater	VAITLGKDCQISLDGGIIASARNVTLTESARTIEVNAYGSRESSSYSTGYECTVSVELNDPTELGSAFTRMHTGTTFMVSGGVGGFSFLAVLTGISESDPIDGVVTCTLEARMTDRRLTRQ*
Ga0136641_100025314	3300013286	Freshwater	MAITLGKDCSISLDGGYIASARNVTLTESARTIEVNAYGSRYSAAYSTGYECTVSVELNDPAELVSAFSRMHTGTPFTVYGGVSGFSFLAVLTGISETDPIDGVVTCTLEAKMTDPRLTRE*
Ga0136641_10055987	3300013286	Freshwater	MAITLGKDCSINLDGGIIASARSVTLTESARTIDVNPYGSRYAATYSTGYECTVSVELNDSNDLGTAFQKMHTGGTFEINGGAAGFSFLAVLTGISESDTIDGVATFTLEGKMTDPRLAR
Ga0187844_103624271	3300018868	Freshwater	VAITLGKDCRISLDGGIIASARNVTLTESARTIEVNAYGSRESSSYSTGYDCTVSVELNDAADLGSAFTRMHTGTPFMVSGGVGGFSFYAVLTGISETDPIDGVVTCTLEARMTDRRLTR
Ga0208085_10151222	3300020526	Freshwater	VAITLGKDCSIVLDGGYIASARNVTLTESARTIDVNPYGSRYAATYNTGYDCTVSVELNDVSGLGTAFQKMHTGGTFTVSGGAAGFSFLAVMTGISESDPVDGVATFTLEGKMTDPRLVR
Ga0194041_101136782	3300021340	Anoxic Zone Freshwater	MAITLGKDCSISLGGSYIASARNVTLTESARTIEVNPYGSRYAATYSTGYECTVSVELNDVAGLGIAFQKMHSGGTFQVYGGAAGFSFLAVMTGISETDPIDGVATFTIEGKMTDPRLVR
Ga0213920_10168433	3300021438	Freshwater	MPITLGKDCSISFGGTVTGVRNVTLTESARTIEVNRFGSRYAATYNTGYECTVSVELNNSTGLSDVFTKMHTGGTFTVSGGAGGFTFLAVMTSITETDPIDGVATFVLEGRMTDPALTR
Ga0214921_102051863	3300023174	Freshwater	MAITLGKDCTISIGGAVRGVRNVTLTETARTIDINPFGSREASVYQTGYDCSVSVELNDSEALGNAFSNMHTGTPVDVSGGAGSFSFKAVITGISESDPIDGVATFTIDAKMTDRSLTRGGA
Ga0214923_1000347521	3300023179	Freshwater	MAITLGKDCTISLDGGTILSARNVTLTESARTIDVNPYGSRYAGVYSTGYECTVSVELNDSADLGTAFLQMHTGGTFNVVGGAGGFSFLAVLTGISESDPIDGVATFVLEGKMTDPNLQR
Ga0214919_100701763	3300023184	Freshwater	MAITLGKDCTISFDGSTITSARNVTLTESARTIDVNRFGSRYAATYSTGYECSVSVELNDSEDLASLFTAMHTGSTFQVSGGAGSFLFTAVMTGISETDSIDGVATFTIEGKMTDPKLTR
Ga0207954_10996471	3300025606	Freshwater	MAITLGKDCSISLGGTIASARSVTLSESARTIDVNPYGSRYSCVYQTGYECSVSVELNDSADLKSAFYNMHTGMPFQVSGGAAGFSFKAVMTAISESDPIDGVATFTLEGKMTDPRLNRDSG
Ga0208009_10124424	3300027114	Deep Subsurface	MAITLGKDCTIVLDGGYIASARNVTLTESARTIDVNAFGSRYAAVYSTGYDCSVSVELNDVAGLGTAFQKMHTGGTFTVNGGAAGFSFLAVMTGISETDPIDGVATFVLEGRMTDPALVR
Ga0255182_10072697	3300027503	Freshwater	VAITLGKDCFIALDGGVIASARNVQLSESARTIEINEFGSRYAAVYSTGYECTVSVELNDPAELGSAFARMHTGTSFTVYGGASGFAFQAVLTGISESDPIDGVVTCTLEGKMTHPSLRA
Ga0208787_11219651	3300027518	Deep Subsurface	MAITLGKDCTIVLDGGYIASARNVTLTESARTIDVNAFGSRYAAVYSTGYDCSVSVELNDVAGLGTAFQKMHTGGTFTVNGGAAGFSFLAVMTGISETDPIDGVA
Ga0209188_10558653	3300027708	Freshwater Lake	MAITLGKDCTIMLDGGTITSARNVTLTESARTIDVNPYGSRCAATYSTGYECTVSVELNDVSGLGTAFTKMHTGGTFTVVGGAAGFSFLAVLTGISETDPIDGVATFTLEGKMTDPNLVR
Ga0209188_10759022	3300027708	Freshwater Lake	MAITLGKDCTISIGGAVTGVRNVTLTETARTIDINPFGSREASVYSTGYDCSVSVELNDSESLDNAFLNMHSGTPVQVTGGAGGFSFLAVITGISESDPIDGVATFTIDAKMTDRSLTRG
Ga0209087_10766963	3300027734	Freshwater Lake	MAITLGKDCTIRLDGGTITSARNVTLTESARTIDVNPYGSRYAATYSTGYECTVSVELNDAGDLGTAFQKMHKGGTFEVRGGAAGFSFLAVLTGISETDPIDGVSSFVLEGKMTDPRLVR
Ga0209085_100045249	3300027741	Freshwater Lake	MAIALGKDCTVSFAGGTIYSARNVTLTESARTIDINPYGSRYAAVYSTGYECSVSVEFNDGDDLGSAFSLMHTGGTFQVAGGQGGFSFIAVMTSITETDPIDGVATFVVEGRMTDPRLTR
Ga0209085_100123523	3300027741	Freshwater Lake	MAITLGKDCRISIGGTVSGVRNVTLTETARTIDINPFGSREASVYQTGYDCSVSVELNDSEALGDAFSNMHTGTPVQVSGGAGGFNFLAVITGISENDPIDGVATFTIDAKMTDRSLTRGGA
Ga0209085_10016245	3300027741	Freshwater Lake	MAITLGKDCTISIGGNISGARNVTLTETARTIDINPFGSREASVYQTGYDCSVSVELNDSSALSSVFSSMHTGTPVQVSGGAGSFSFLAVITGISESDPIDGVATFTIDAKMTDQSLQRSGGNA
Ga0209085_10019767	3300027741	Freshwater Lake	MAITLGKDCTISLDGGYIASARNVTLTESARTIEVNPYGSRYAATYSTGYECTVSVELNDVEGLGTAFQRMHTGGTFMVNGGAAGFSFLAVLTGITETDPVDGVATFTLEGKMTDPRLVR
Ga0209085_10023435	3300027741	Freshwater Lake	MAITLGKDCSIMLDGGYIASARNVTLTESARTIDVNAYGSRYSAAYSTGYECTVSVELNNPAEILAAFSRMHTGTPFTVYGGAAGFSFLAVLTGISETDPIDGVVTCTLEAKMTDPRLLRQS
Ga0209085_10052063	3300027741	Freshwater Lake	MAIALGKDCTVSFAGSTIYSARNVTLTESARTIDINPYGSRYAAVYSTGYECSVSVEFNDGADLGSAFSLMHTGGTFQVAGGQGGFSFNAVMTSITETDPIDGVATFVVEGRMTDPRLTR
Ga0209085_10150634	3300027741	Freshwater Lake	LAIVLGKDCTITLAGGVILSARNVTLTESARTIEINEYGSRYSSVYSTGYECSVSVEFNDPADLGTAFNLMHTGSSFAVSGGASGFSFQAVMTGIGESDPIDGVATCTIEARMTHPTLRA
Ga0209085_10236162	3300027741	Freshwater Lake	MAITLGKDCSIVLDGGFIRSARNVTLTESARTIEVNPYGSRYAATYSTGYECTVSVELNDSADLGAAFEKMHTGGTFQVIGGAAGFSFLAVLTGITETDPVDGVATFTLDGKMTDPRLVR
Ga0209085_10394903	3300027741	Freshwater Lake	MAITLGKDCTIILDGGYIASARNVTLTESARTIDVNPYGSRYAATYSTGYDCTVTVELNNAYDLGTAFEKMHTGGTFTVYGGAAGFSFLAVMTGISESDPIDGVASFTLEGKMTDPRLTR
Ga0209085_10563063	3300027741	Freshwater Lake	MAITLGKDCTIMLDGGYIASARNVTLTESARTIEVNPYGSRYAATYSTGYECTVSVELNDAADLGTAFQKMHTGGTFEVFGGVAGFSFLAVLTGISESDPVDGVATFTLEGKMTDPRLER
Ga0209085_11147743	3300027741	Freshwater Lake	MAITLGKDCSIMLDGGYIASARNVTLTESARTIDVNAYGSRYSATYSTGYECTVSVELNDPAEIFSAFSRMHTGTPFTVYGGAAGFSFLAVLTGISETDPIDGVVTCTLEAKMTDPRLTR
Ga0209085_11719743	3300027741	Freshwater Lake	MAITLGKDCSISLDGGYIASARNVTLTESARTIDVNPYGSRYAATYSTGYECTVSVELNDVAGLGTAFERMHTGGTFTVYGGAAGFAFLAVLTSISESDPVDGVATFTLEGKMTDP
Ga0209189_100040023	3300027747	Freshwater Lake	MAITLGKDCRISIGGNVSGARNVTLTETARTIDINPFGSREASVYQTGYDCSVSVELNDSEALGDAFSNMHTGTPVQVSGGAGGFNFLAVITGISENDPIDGVATFTIDAKMTDRSLTRGGA
Ga0209189_100489611	3300027747	Freshwater Lake	MAITLGKDCTIMLDGGYIASARNVTLTESARTIDVNPYGSRYASVYSTGYECTVSVELNDAEDLGTAFQKMHTGGTFEVFGGVAGFSFLAVLTGISESDPVDGVATFTLEGKMTDSRLTR
Ga0209189_10380863	3300027747	Freshwater Lake	VAIVLGKDCTITLAGGVILSARNVTLTESARTIEINEYGSRYSSVYSTGYECSVSVEFNDPADLGTAFNLMHTGSSFAVSGGASGFSFQAVMTGIGESDPIDGVATCTIEARMTHPTLRA
Ga0209189_10664103	3300027747	Freshwater Lake	MAITLGKDCTIMLDGGYITSARNVTLTESARTIDVNPYGSRYAATYSTGYECTVSVELNDSADLGTAFEKMHTGGTFMVNGGASGFSFLAVLTGISESDPVDGVATFTLEGKMTDPRLVR
Ga0209189_11876332	3300027747	Freshwater Lake	IASARNVTLTESARTIDVNAYGSRVAGVYSTGYDCMVSVELNDPEDLGDSFASMHTGTTFTVTGGAGSFSFLAVMTGISETDPLDGVATFTLEGRMTDPGLGRT
Ga0209829_102629812	3300027777	Freshwater Lake	MSITLGKDCTIMLDGGYIASARNVTLTESARTIDVNPYGSRYASVYSTGYECSVSVELNDAEDLGTAFEKMHAGGTFQVSGGVGGFSFLAVLTGISESDPVDGVATF
Ga0209400_10003112	3300027963	Freshwater Lake	MAITLGKDCTISIGGTVSGVRNVTLTETARTIDINPFGSREASVYQTGYDCSVSVELNDSAALGNAFSNMHNGTPVQVSGGAGSFSFLAVITGISESDPIDGVATFTIDGKMTDRSLTRGGA
Ga0209400_100037040	3300027963	Freshwater Lake	MAITLGKDCSIMLDGGYIASARNVTLTESARTIDVNAYGSRYSAAYSTGYECTVSVELNDPAEIFSAFSRMHTGTPFTVYGGAAGFSFLAVLTGISETDPIDGVVTCTLEAKMTDPRLTR
Ga0209400_10007807	3300027963	Freshwater Lake	MAITLGKDCTIRLDGGTITSARNVTLTESARTIDVNPYGSRYAATYSTGYECTVSVELNDAGDLGTAFQKMHKGGTFEVSGGAAGFSFLAVLTGISETDPIDGVATFVLEGKMTDPRLVR
Ga0209400_13256201	3300027963	Freshwater Lake	MAITLGKDCSISLDGGLIASARNVTLTESARTIDVNPYGSRYSATYSTGYECTVSVELNDPAELGSAFYRMHTGTPFTVYGGISGFSFLAVLTGISETDPIDGVVTCTLEAKMTDPRLTR
Ga0209401_10131847	3300027971	Freshwater Lake	VAITLGKDCSIMLDGGYIASARSVTLTESARTIDVNPYGSRYAATYSTGYDCTVSVELNDVSGLGTAFEKMHTGGTFQVYGGAAGFSFLAVMTGISESDPIDGVATFTLEGKMTDPRLVR
Ga0209401_11842461	3300027971	Freshwater Lake	MSITLGKDCSIALDGGYIASARNVTLTESARTIDVNAYGSRYVSVYHTGYDCSVSVELNDPAELGSAFSRMHTGTPFTVYGGAGGFSFLAVLTGISETDPIDGVVTCTLEAKMTDPSLTR
Ga0209298_1000016420	3300027973	Freshwater Lake	MAITLGKDCTISLDDGTIASARSVTLTESARTIDVNPFGSRYAAIYSTGYECTVNVEFNDATDLGSAFTKMHTGGTFEVRGGAGGFSFFAVLTGISETESIDGVATFTLEGKMTDTSLKR
Ga0304728_10245273	3300028393	Freshwater Lake	VAITLGKDCTISLDGGYIASARNVTLTESARTIDVNPYGSRYAATYSTGYECTVGVELNDVAGLGTAFSKMHSGGTFQVSGGAGGFSFLAVLTGISETSSIDGVATFTLEGKMTDPRLER
Ga0304730_100082622	3300028394	Freshwater Lake	MAITLGKDCSISLGGTIASARSVTLSESARTIDVNPYGSRYSCVYQTGYECSVSVELNDSADLKSAFDNMHTGMPFQVSGGSAGFSFKAVMTAISESDPIDGVATFTLEGKMTDTRLTRGSG
Ga0334977_0393436_284_646	3300033978	Freshwater	MAITLGKDCSIMLDGGYIFSARNVTLTESARTIDVNPYGSRYAGVYSTGYECSVSVELNDAADLGTAFERMHTGGTFTVNGGAGGFSFLAVMTGISETDPIDGVATFTLEGRMTDPRLAR
Ga0334994_0137577_1_291	3300033993	Freshwater	MAITLGKDCSIVLDSGQILSARNVTLTESARTIDVNAYGSRYAAVYSTGYECSVSVELNDAADLGTAFQKMHTGGTFQVSGGAGGFSFLAVMTGISE
Ga0334985_0002503_13323_13688	3300034018	Freshwater	VAITLGKDCSIVLDGGFIASARNVTLTESARTIDVNPYGSRYAATYNTGYDCTVSVELNDVAGLGTAFQKMHSGGTFTVSGGAAGFSFLAVMTGISETDPIDGIASFVLEGKMTDPRLAR
Ga0335004_0225898_842_1135	3300034021	Freshwater	VTLTESARTIDVNPYGSRYAATYSTGYECTVSVELNDDADLGTAFQKMHTGGTFQVAGGAAGFGFLAVMTGISETDPIDGVATFQLEGRMTDPRLVR
Ga0335004_0589618_223_588	3300034021	Freshwater	VAITLGKDCSIMLDGGYIFSARNVTLTESARTIDVNPYGSRYAATYNTGYDCTVSVELNNASDLGTAFEKMHTGGTFSVWGGAAGFSFLAVMTGISESDPVDGVATFTLEGKMTDPRLVR
Ga0334987_0113550_74_436	3300034061	Freshwater	MAITLGKDCSVVLDSGQILSARNVTLTESARTIDVNAYGSRYAAVYSTGYECSVSVELNDAADLGTAFQKMHTGGTFQVSGGAAGFSFMAVMTGISESDPIDGVATFTLEGRMTDPRLAR
Ga0334995_0002614_16894_17256	3300034062	Freshwater	MAITLGKDCSIMLDGGYIFSARNVTLTESARTIDVNPYGSRYAGVYSTGYECSVSVELNDAADLGTAFERMHTGGTFTVSGGAGGFSFLAVMTGISETDPIDGVATFTLEGRMTDPRLAR
Ga0335019_0010830_320_682	3300034066	Freshwater	VAITLGKDCSIMLDGGQIFSARNVTLTESARTIDVNAYGSRYAAVYSTGYECSVSVELNDAADLGTAFQKMHTGGTFTVNGGAAGFSFLAVMTGISETDPIDGVASFVLEGRMTDPALVR
Ga0335031_0119053_498_860	3300034104	Freshwater	VAITLGKDCSIVLDGGQIFSARNVTLTESARTIDVNAYGSRYAAVYSTGYECSVSVELNDAADLGTAFQRMHTGGTFTVNGGAAGFSFLAVMTGISETDPIDGVAAFVLEGRMADPALVR
Ga0335031_0403343_276_638	3300034104	Freshwater	VAITLGKDCSIVLDGGQIFSARNVTLTESARTIDVNAYGSRYAAVYSTGYECSVSVELNDAADLGTAFQKMHTGGTFTVNGGAAGFSFLAVMTGISETDPIDGVAAFVLEGRMTDPALVR
Ga0335036_0032890_285_647	3300034106	Freshwater	MAITLGKDCSIVLDGGQIFSARNVTLTESARTIDVNAYGSRYAAVYSTGYECSVSVELNDAADLGTAFQRMHTGGTFTVNGGAAGFSFLAVMTGISETDPIDGVASFVLEGRMTDPALVR
Ga0335036_0152237_1305_1634	3300034106	Freshwater	VLDSGQILSARNVTLTESARTIDVNAYGSRYAAVYSTGYECSVSVELNDAADLGTAFQKMHTGGTFQVSGGAAGFSFMAVMTGISESDPIDGVATFTLEGRMTDPRLAR
Ga0335036_0198213_64_426	3300034106	Freshwater	VAITLGKDCSIMLDGGYIFSARNVTLTESARTIDVNPYGSRYAATYNTGYDCTVSVELNNVSDLGTAFEKMHTGGTFTVWGGAAGFSFLAVMTGIAETDPIDGVATFVLEGRMTDPRLAR
Ga0335053_0410716_353_718	3300034118	Freshwater	VAITLGKDCSIVLDGGYIASARNVMLTESARTIDVNPYGSRYAATYSTGYDCTVSVELNDAAGLGTAFQKMHTGGTFTVFGGAAGFSFLAVMTGISESDPVDGVATFTLEGKMTDPRLVR
Ga0335056_0718169_3_302	3300034120	Freshwater	VAITLGKDCRISLGSTVASARNVTLSETARTIEVNAFGSRYATVYSTGYECAVQVELLDPAALGQAFTRLHAGTRFTVSGGAANFSFQAIVTGITESDPI
Ga0335060_0239065_61_390	3300034122	Freshwater	MLDGGYIFSARNVTLTESARTIDVNPYGSRYAATYNTGYDCTVSVELNNVSDLGTAFEKMHTGGTFTVWGGAAGFSFLAVMTGISETDPIDGVATFTLEGRMTDPRLAR
Ga0335052_0507579_215_580	3300034279	Freshwater	VAITLGKDCSIVLDGGFIASARNVTLTESARTIDVNPYGSRYAATYNTGYDCTVSVELNDVAGLGTAFQKMHSGGTFTVSGGAAGFSFLAVMTGIRETDPIDGIASFVLEGKMTDPRLAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098561

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences