Metagenome Family F098790

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098790
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	67 residues
Representative Sequence	MSKLIVRFLAILGALWLIGMVIVLVAVIGAKGRVPSKTILEANFEQTFLEDAPDTPTARLMLTEKQ
Number of Associated Samples	90
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.03 %
% of genes near scaffold ends (potentially truncated)	99.03 %
% of genes from short scaffolds (< 2000 bps)	94.17 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.456 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (15.534 % of family members)
Environment Ontology (ENVO)	Unclassified (44.660 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.748 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.81% β-sheet: 0.00% Coil/Unstructured: 53.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00920	ILVD_EDD	23.30
PF00155	Aminotran_1_2	2.91
PF14559	TPR_19	1.94
PF00082	Peptidase_S8	1.94
PF14014	DUF4230	1.94
PF04199	Cyclase	0.97
PF13519	VWA_2	0.97
PF00293	NUDIX	0.97
PF00887	ACBP	0.97
PF01019	G_glu_transpept	0.97
PF07681	DoxX	0.97
PF03544	TonB_C	0.97
PF00266	Aminotran_5	0.97
PF05096	Glu_cyclase_2	0.97
PF01061	ABC2_membrane	0.97
PF02700	PurS	0.97
PF13711	DUF4160	0.97
PF01663	Phosphodiest	0.97
PF01797	Y1_Tnp	0.97
PF13365	Trypsin_2	0.97
PF17200	sCache_2	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	46.60
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.97
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.97
COG1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunit	Nucleotide transport and metabolism [F]	0.97
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.97
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.97
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.97
COG3823	Glutamine cyclotransferase	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.97
COG4281	Acyl-CoA-binding protein	Lipid transport and metabolism [I]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.46 %
Unclassified	root	N/A	48.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.46 %
Unclassified	root	N/A	48.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.46 %
Unclassified	root	N/A	48.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.54 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	21.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.68 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.68 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.97 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.80 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.97 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.68 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.94 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.94 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.97 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.97 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.68 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1.94 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.97 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.97 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.97 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.97 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.68 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1.94 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.97 %
Acidipila sp. EB88	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp. EB88	0.97 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.97 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.97 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10048865	All Organisms → cellular organisms → Bacteria → Proteobacteria	2284	Open in IMG/M
3300001471\|JGI12712J15308_10123159	Not Available	663	Open in IMG/M
3300001546\|JGI12659J15293_10111573	Not Available	594	Open in IMG/M
3300001593\|JGI12635J15846_10277439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1060	Open in IMG/M
3300001593\|JGI12635J15846_10520201	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300002245\|JGIcombinedJ26739_101317644	Not Available	613	Open in IMG/M
3300004082\|Ga0062384_101097170	Not Available	574	Open in IMG/M
3300005712\|Ga0070764_10381954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	829	Open in IMG/M
3300006059\|Ga0075017_101032463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	641	Open in IMG/M
3300006086\|Ga0075019_10994751	Not Available	541	Open in IMG/M
3300006102\|Ga0075015_100427175	Not Available	752	Open in IMG/M
3300006102\|Ga0075015_100965663	Not Available	520	Open in IMG/M
3300006162\|Ga0075030_100568696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	900	Open in IMG/M
3300006893\|Ga0073928_10616151	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300009038\|Ga0099829_10655925	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300009088\|Ga0099830_10916876	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300009524\|Ga0116225_1442158	Not Available	578	Open in IMG/M
3300009623\|Ga0116133_1102932	Not Available	727	Open in IMG/M
3300009632\|Ga0116102_1045202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1404	Open in IMG/M
3300009632\|Ga0116102_1205832	Not Available	527	Open in IMG/M
3300009637\|Ga0116118_1042477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1637	Open in IMG/M
3300009644\|Ga0116121_1097641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300009665\|Ga0116135_1043219	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300009700\|Ga0116217_10727160	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300009760\|Ga0116131_1231700	Not Available	508	Open in IMG/M
3300009764\|Ga0116134_1276628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp. EB88	578	Open in IMG/M
3300009839\|Ga0116223_10502881	Not Available	705	Open in IMG/M
3300010339\|Ga0074046_10065035	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	2392	Open in IMG/M
3300010366\|Ga0126379_12049677	Not Available	674	Open in IMG/M
3300010379\|Ga0136449_100940037	Not Available	1402	Open in IMG/M
3300010379\|Ga0136449_102849000	Not Available	681	Open in IMG/M
3300011269\|Ga0137392_10085599	All Organisms → cellular organisms → Bacteria	2455	Open in IMG/M
3300011271\|Ga0137393_11337416	Not Available	605	Open in IMG/M
3300012202\|Ga0137363_11171421	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300012210\|Ga0137378_10386477	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300012211\|Ga0137377_10237134	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300012362\|Ga0137361_10770632	Not Available	876	Open in IMG/M
3300012917\|Ga0137395_10093546	Not Available	1984	Open in IMG/M
3300014155\|Ga0181524_10155403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1177	Open in IMG/M
3300014490\|Ga0182010_10176314	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300014496\|Ga0182011_10437805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300014502\|Ga0182021_10842616	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300017933\|Ga0187801_10082022	Not Available	1207	Open in IMG/M
3300017934\|Ga0187803_10282040	Not Available	661	Open in IMG/M
3300017940\|Ga0187853_10328891	Not Available	686	Open in IMG/M
3300017970\|Ga0187783_10653566	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300018001\|Ga0187815_10524368	Not Available	508	Open in IMG/M
3300018006\|Ga0187804_10351661	Not Available	648	Open in IMG/M
3300018006\|Ga0187804_10394521	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300018009\|Ga0187884_10450271	Not Available	517	Open in IMG/M
3300018012\|Ga0187810_10208776	Not Available	795	Open in IMG/M
3300018020\|Ga0187861_10050566	Not Available	2172	Open in IMG/M
3300018020\|Ga0187861_10177850	All Organisms → cellular organisms → Bacteria → Acidobacteria	964	Open in IMG/M
3300018021\|Ga0187882_1046137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2099	Open in IMG/M
3300018021\|Ga0187882_1089940	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300018022\|Ga0187864_10239925	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300018026\|Ga0187857_10149456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1111	Open in IMG/M
3300018030\|Ga0187869_10233838	All Organisms → cellular organisms → Bacteria → Acidobacteria	893	Open in IMG/M
3300018038\|Ga0187855_10201139	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300018042\|Ga0187871_10346694	Not Available	821	Open in IMG/M
3300018043\|Ga0187887_10264625	Not Available	1017	Open in IMG/M
3300018046\|Ga0187851_10450726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300018047\|Ga0187859_10171765	Not Available	1153	Open in IMG/M
3300018047\|Ga0187859_10413123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300018057\|Ga0187858_10534568	Not Available	713	Open in IMG/M
3300018062\|Ga0187784_10288634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1333	Open in IMG/M
3300018062\|Ga0187784_10540767	Not Available	937	Open in IMG/M
3300018085\|Ga0187772_10635372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300018086\|Ga0187769_10353463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300018086\|Ga0187769_11171411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300018088\|Ga0187771_10677313	Not Available	875	Open in IMG/M
3300018090\|Ga0187770_11171339	Not Available	621	Open in IMG/M
3300018090\|Ga0187770_11271898	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300020580\|Ga0210403_10149350	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300021088\|Ga0210404_10523817	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300021088\|Ga0210404_10897112	Not Available	507	Open in IMG/M
3300021560\|Ga0126371_12604849	Not Available	613	Open in IMG/M
3300023090\|Ga0224558_1073561	All Organisms → cellular organisms → Bacteria → Acidobacteria	1280	Open in IMG/M
3300023090\|Ga0224558_1172773	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300025432\|Ga0208821_1035660	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300025454\|Ga0208039_1068351	Not Available	633	Open in IMG/M
3300025612\|Ga0208691_1048702	Not Available	962	Open in IMG/M
3300026358\|Ga0257166_1051353	Not Available	587	Open in IMG/M
3300026557\|Ga0179587_11114118	Not Available	519	Open in IMG/M
3300027546\|Ga0208984_1085561	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300027570\|Ga0208043_1180064	Not Available	540	Open in IMG/M
3300027633\|Ga0208988_1053156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300027854\|Ga0209517_10425998	Not Available	739	Open in IMG/M
3300028047\|Ga0209526_10391553	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300028536\|Ga0137415_11323419	Not Available	539	Open in IMG/M
3300028673\|Ga0257175_1058806	Not Available	715	Open in IMG/M
3300029911\|Ga0311361_10243142	Not Available	2122	Open in IMG/M
3300029914\|Ga0311359_10880018	Not Available	618	Open in IMG/M
3300029917\|Ga0311326_10132548	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300030506\|Ga0302194_10120005	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300030618\|Ga0311354_11190583	Not Available	690	Open in IMG/M
3300030688\|Ga0311345_10289546	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300031236\|Ga0302324_103597007	Not Available	501	Open in IMG/M
3300031525\|Ga0302326_13121020	Not Available	562	Open in IMG/M
3300031788\|Ga0302319_10557450	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300031820\|Ga0307473_11475111	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300032955\|Ga0335076_11742900	Not Available	512	Open in IMG/M
3300033402\|Ga0326728_10869856	Not Available	644	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.19%
Aquatic	Environmental → Aquatic	39.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.54%
Freshwater	Environmental → Aquatic → Freshwater	33.98%
Peat	Environmental → Terrestrial → Peat	11.65%
Sediment	Environmental → Aquatic → Sediment	4.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.97%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	33.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.65%
Loam	Environmental → Terrestrial → Soil → Loam	8.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.85%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.91%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.97%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	15.53%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	10.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.74%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.83%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.85%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.91%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.94%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.97%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.97%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025432	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100488653	3300000567	Peatlands Soil	MSKAIVRFLAILGALWLIGMVIVLVAVIGTKGKVPSKTILEANFEQTFMEEVPQTPSAQLLLNEKQTLRDVIDAIDR
JGI12712J15308_101231591	3300001471	Forest Soil	VARAIVRFLAILGALGLIGLGIAAYVSISVKGKVPSKTILEANFEQSFLEDAPATPTAQLILSEKTTLRDVVDAI
JGI12659J15293_101115731	3300001546	Forest Soil	MSKLVVRFLAILGALWLIGMAIVLFAVIRTKGTVPSKTILEANFDKSFLEELPDTPAARLMSTDRQ
JGI12635J15846_102774391	3300001593	Forest Soil	MSKAIVRFLAIVGALFLIGLVIVTVTVIGKKGRVPSRTILEANFDQTLLEDIPATPTAQLMLND
JGI12635J15846_105202012	3300001593	Forest Soil	MFKSIVRFLAILGALAIIGTVFAVVAVIGSKGTVPSKTILEANFEHALLENVPETPVARLMLNEKQTLR
JGIcombinedJ26739_1013176442	3300002245	Forest Soil	MSKAIVRFLSILGALWLVGMAIVLAVVVGSKGKVPPKTILEADFEQTFLEDAPDTAAAQLMLVEKQTLRDVVDAM
Ga0062384_1010971702	3300004082	Bog Forest Soil	MSNAIVRFLAILGALWLIGMVIVLVAVMGAKGKISSKTILEANFGQTFLEDAPDTPTAQLMLNEKQTLRDVVDAIDR
Ga0070764_103819542	3300005712	Soil	MSKLVVRFLAILGALWLIGMAIVLFAVIRTKGTVPSKTILEANFDKSFLEELPDTP
Ga0075017_1010324631	3300006059	Watersheds	MSRVIVRFLAILGALWLIGLVIVMVAIIGSKGRVPSKTILEANLEQSFLEDAPDTPTAKFMLIERFTLRD
Ga0075019_109947511	3300006086	Watersheds	MSKAIVRFLAILGALWLIGMVIVLVAVIGAKGRVPSKTILEANFEQSFLEDAPDTPTAHL
Ga0075015_1004271752	3300006102	Watersheds	MSKAIVRFLAILGALWLIGLVIVMIAVIGTKGRVPSKTILEADFEQTFLEDAPQTPAAQLMLTEKQT
Ga0075015_1009656631	3300006102	Watersheds	MFKAIVRFLAILGALWLIGSVIMMVAVIGFKGKVPAKTILEANLEQSFPENAPDTPTAKLMLSEKATLRDV
Ga0075030_1005686963	3300006162	Watersheds	MSKLIVRFLAILGALWLIGMVIVLVAVIGLKGKVPSKTILEANFEQPFMEDVPDTPTAHLMLT
Ga0073928_106161511	3300006893	Iron-Sulfur Acid Spring	MSKLIVRFLAILGALWLIGMVIVLVAVIGAKGRVPSKTILEANFEQTFLEDAPDTPTARL
Ga0099829_106559252	3300009038	Vadose Zone Soil	MSKAIVRFLAILGALWLIGMVIVLVAVIGAKGRVPSKTILEANFEQTFLEDAPDTATARLMLTEKQTLRDVV
Ga0099830_109168762	3300009088	Vadose Zone Soil	MSKLIVRFLAILGALWLSGMVIVLVAVIGAKGIIPSKTILEANFEQPFLEDVPQTPAAQLLLAEKQTLRDVV
Ga0116225_14421581	3300009524	Peatlands Soil	MSKAIVRFLAILGALWLIGMVIVLVAVIGTKGKVPSKTILEANFEQAFMEDVPDTPSA
Ga0116133_11029321	3300009623	Peatland	MKEQIMSKAIVRFLAILGALWLIGMVIVLVTVIGMKGKVPSKTILEANFQEAFPEDIPNTPTAQLMLNQRETLRDVLDAIDR
Ga0116102_10452022	3300009632	Peatland	MSKLIVRFLAILGALWLIGMVIVLVAVIGMKGRVPSKTILEANFEQTFMEDVPDTPSAQLLLN
Ga0116102_12058321	3300009632	Peatland	MSKLIVRFLAILGALWLIGMVIVLVAVIGVKGRVPSKTILEANFEQTFMEDVPDTPSAQLLLNEKQT
Ga0116118_10424771	3300009637	Peatland	MSKLIVRFLAILGALWLIGMVIVLVAVIGVKGRVPSKTILEANFEQTFLEDVPDTPS
Ga0116121_10976412	3300009644	Peatland	MSKLIVRFLAILGALWLIGMVIVMVAVIGVKGKVPSKTILEANFEQTFLEDAPETPTAQLMLID
Ga0116135_10432192	3300009665	Peatland	MSKAIVRFLAILGALSLIGTAIVMIAVIGVRGEVPSKTILEANFEEAFPEDVPDTPTAHLMLDQ
Ga0116217_107271602	3300009700	Peatlands Soil	MSKLIVRFLAILGALWLIGMVIVLVAVIGVRGKVPSKTILEANFEQSFLEDAPDTPT
Ga0116131_12317001	3300009760	Peatland	MSKLIVRFLAILGALWLIGMVIVLVAVIGVKGKVPSKTILEANFEQTFMEDIPQTPTAQLLLT
Ga0116134_12766281	3300009764	Peatland	MSKAIVRFLAILGALWLIGMVIVLVAVIGAKGKVPSKTILEANFEQTFPEDVPNTPTAQLMLTGNEKQT
Ga0116223_105028811	3300009839	Peatlands Soil	MSKLIVRFLAILGALWLIGLVIVLVAVIGVKGKVPSKTILEADFEQTFLEDAPDTPTAQLLLNEKQTL
Ga0074046_100650351	3300010339	Bog Forest Soil	MSKSIVRFLAILGGLWLIGMVIVLVAVIGIRGRVPTKTILEANFEQAFMEDVPDTPTSRLMLTERETL
Ga0126379_120496771	3300010366	Tropical Forest Soil	MSKFIVRFLAILGGLWLVGLFIVLIAVIGPKGRIPSRTILEANFEGPLLENIPDTPQARFMLKS
Ga0136449_1009400371	3300010379	Peatlands Soil	MSKLIVRFLAILGALWLIGMVIVMVAVIGSKGKVPSKTILEANFEQSFLENAPETPTA
Ga0136449_1028490001	3300010379	Peatlands Soil	MSKVIVRFLAILGALWLIGMVIVMVAVIGMKGRVPSKTILEANFEQTFMEDVPDTPPAQLLLNEKQTLRDVV
Ga0137392_100855992	3300011269	Vadose Zone Soil	MLKVIVRFLAILGALWLVAMVIMIVAVIGSKGTVPEKTILEADFEQALPEDIPDNPTAKFLMNE*
Ga0137393_113374161	3300011271	Vadose Zone Soil	MSKVILRFLAILGALWLIGLVIVLIFVIGPKGKVPSRTILEANLEQPLVEDIPETPSAKLMLTDRHTVRDV
Ga0137363_111714212	3300012202	Vadose Zone Soil	MSKLIVRFLAILGALWLIGMVIVLVAVIGAKGRVPSKTILEANFEQTFLEDAPDTPTARLMLTEKQ
Ga0137378_103864772	3300012210	Vadose Zone Soil	MSKVIVRFLAILGALWLVAMVIMIVAVIGSKGTVLEKTILEADFEQALPEDIPDNPTAKFLMNERPTVRDVVDAID
Ga0137377_102371342	3300012211	Vadose Zone Soil	MSKLILRFLAILGALWLVGMVIVLVAVIGAKGRVPSKTILEANFEKTFLEDAPDTPTARLMLAEKQTLRD
Ga0137361_107706322	3300012362	Vadose Zone Soil	MSKAIVRFLAILGALWLIGMVIVMVAVIGVKGKVPSKTILEANFEQPFMEVVPETPSAQLLLT
Ga0137395_100935463	3300012917	Vadose Zone Soil	MSKLIVRFLAILGALWLIGMVIALVAVIGAKGRVPSKTILEANFEQTFLEDAPDTPTARLMLTDKQTLR
Ga0181524_101554031	3300014155	Bog	MSKVIVRFLAILGALWLIGMVIVLVAVIGLKGKVPSKTILEANFEQTFLEDVPDTPAAQLMLTEKQTLRD
Ga0182010_101763142	3300014490	Fen	MSKLIVRFLAILGALWLIGMVIVLVAVIGAKGKVPSKTILEANFEQTFLEDVPDTPSAQLLLTERQQTLR
Ga0182011_104378051	3300014496	Fen	MSKLIVRFLAILGALWLIGMVIILVAVIGVKGKVPSKTILEANFEQAFPEDVPDTPSAQLLLTDRQT
Ga0182021_108426161	3300014502	Fen	MSKLIVRFLAILGALWLIGMVIVLVAVIGAKGKVPSKTILEANFEQTFLEDVPDTPSAQLLLTERQQTLRDVVDAIDRGAS
Ga0187801_100820221	3300017933	Freshwater Sediment	MSKVIVRFLAILGALWLIGMVIVLLAVIGMKGRVPSKTILEANFEQTFMEDVPNTPSAQLLLSEKQTL
Ga0187803_102820402	3300017934	Freshwater Sediment	MSKLIVRFLAILGALWLIGLVIVLIFAIGSKGKVPSRTILEANLEQPLAEDIPETPSAKLMLTD
Ga0187853_103288911	3300017940	Peatland	MSKLIVRFLAILGALWLIGMVIVMVAVIGSKGKVPSKTILEANFEQAFMEDVPDTPAAQLVLNEKQTVRDVVDAI
Ga0187783_106535662	3300017970	Tropical Peatland	MSKFVVRFLAILGALWLIGMVIMLVAVIGAKGKVPSKTILEADFEQPLAENVPETSIARLTMAEKTSLR
Ga0187815_105243681	3300018001	Freshwater Sediment	MSKVIVRFLAILGALSLVGMVIVMVAVIGVKGKVPSKTILEANFEQTFMEDVPDTPSA
Ga0187804_103516612	3300018006	Freshwater Sediment	MSKVIVRFLAILGALWLIGMVIVLLAVIGMKGRVPSKTILEANFEQTFMEDVPNTPSAQLLLSEKQ
Ga0187804_103945212	3300018006	Freshwater Sediment	MSKLIVRFLAILGALGLIGVVIVLVFAIGSKGVVPSKTILEANFEQSFPEDIPDTPAA
Ga0187884_104502712	3300018009	Peatland	MSKLIVRFLAILGALWLIGMVIVLVAVIGVKGRVPSKTILEANFEQTFMEDVPDTPSAQLLLNEKQTLRDVVD
Ga0187810_102087761	3300018012	Freshwater Sediment	MSKAIVRFLAILGALWLIGLAIVMVAIIGSKGRVPAKTILEANFEQSFPEYTPDTPAAKLML
Ga0187861_100505661	3300018020	Peatland	MSKLVVRFLAILGALWLIGMVIVLVAVIVTKGKVPSKTILEANFEQSFMEDVPGTPSAQLLLNEKQTLRD
Ga0187861_101778501	3300018020	Peatland	MSKFIVRFLAVLGALWLIGMVIVLVAVIGAKGKVPSKTILEANFERANLEDVPDTPAAQLLLTE
Ga0187882_10461371	3300018021	Peatland	MSKVIVRFLAILGALWLIGMVIVLVAVIGVKGKVPSKTILEANFEQTFLEDVPDTPAAQLMLTEKQTLRDVVD
Ga0187882_10899402	3300018021	Peatland	MSKLIVRFLAILGALGLIGMVIVLVAVIGWKGKVPFKTILEANFEQTFLEDAPDTPTAQLMLNEKQTLRDVVD
Ga0187864_102399252	3300018022	Peatland	MSKLIVRFLAILGALWLIGMVIVLVAVIGVKGRVPSKTILEANFEQTFMEDVPDTPSAQLLLNEKQTLRD
Ga0187857_101494563	3300018026	Peatland	MSKFIVRFLAILGALWLIGMIIVLVFVIGAKGRVPSKTILEANFEQTFLEDAPATPTAQLMLTEKQTVR
Ga0187869_102338381	3300018030	Peatland	MSKFIVRFLAVLGALWLIGMVIVLVAVIGAKGKVPSKTILEANFERAYLEDVPDTPAAQLLLTERQQTLRDVVDAID
Ga0187855_102011392	3300018038	Peatland	MLKSIVRFLAILGALSLIGLVIVMAVVIGAKGKVASKTILEADFEQTFLENAPETP
Ga0187871_103466941	3300018042	Peatland	MSKAIVRFLAILGALWLIGMVIVLVTVIGMKGKVPSKTILEANFQEAFPEDIPNTPTAQLMLNQRETLRDVLDAIDRG
Ga0187887_102646251	3300018043	Peatland	MSKLIVRFLAILGALWLIGMVIVMVAVIGVKGKVPSKTILEANFEQTFLEDAPETPTAQLMLIDRQTLRDV
Ga0187851_104507261	3300018046	Peatland	MSKLIVRFLAILGALWLISMIVILVVVVGQKGRVPSKTILEANFEQPLLEDMPDSPTARFTMNDR
Ga0187859_101717654	3300018047	Peatland	MSKAIVRFLAILGALSLVGMVVVMVAVIGSKGKVPSKTILEANLEQSFPEDVPETPSAQLLLRDKQT
Ga0187859_104131231	3300018047	Peatland	MSKLVVRFLAILGALWLIGMAITLVYVIGSKGSVPSKTILEANFEQPFAEQIPDSPTAHFTMSDRQTLRDVIDAIDR
Ga0187858_105345681	3300018057	Peatland	MSKAIVRFLAILGALSLIGTAIVMIAVIGVRGKVPSKTILEANFEEAFPEDVPDTPTAHLMLDQRQTLRDVVD
Ga0187784_102886342	3300018062	Tropical Peatland	MLKLVVRFLAILGALWLIGMAITLVYVMGTKGRVPSKTILEANFEQPFAEQIPETPA
Ga0187784_105407671	3300018062	Tropical Peatland	MSKIIVRFLAILGALWLIGLAIVFIAVIGVKGKVPSKTILEANFEQNFLEDIPNTPPAQLLLNEKPTLRDAVDAID
Ga0187772_106353722	3300018085	Tropical Peatland	MSKLVVRFLAILGALWLIGMVITVAYVIGAKGRVPSKTILEANFEQPLPEEMPDSPAARLTM
Ga0187769_103534631	3300018086	Tropical Peatland	MSKLIVRFLAILGALWLIGMVITLIYVIGTKGSVPSRTILEANFEQPFAEQIPDSPT
Ga0187769_111714111	3300018086	Tropical Peatland	MSKLVVRFLAILGALWLIGMVITVAYVIGAKGRVPSKTILEADFEQPLLEQMPDSASARLTMND
Ga0187771_106773131	3300018088	Tropical Peatland	MSKVIVRFLAILGALWLVGMFIMLVAVIGTKGKVASKTILEANLERSFLEDIPDTPAA
Ga0187770_111713391	3300018090	Tropical Peatland	MSKLVVRFLAILGALWLIGMAITLIYVIGSKGSVPSKTILEANFEQPFAEQIPETPAAHFTMSDRETLRDVIDA
Ga0187770_112718981	3300018090	Tropical Peatland	MSKVIVRFLAILGALWLIGMAIVLLAVIGMKGKVPSKTILEANFEQTFMEDMPNTPPAQLLLSEKQ
Ga0210403_101493502	3300020580	Soil	MSKAIVRFLAVLGALWLIGMVIVLVAVIGAKGKVPSKTILEANFEQTFLEDAPETATARLMLTEKQTLRDVVDA
Ga0210404_105238172	3300021088	Soil	MSKLIVRFLAILGALWLITMVIVLWAVIGAKGKVPSKTILEANFEQTFLEDAPDTPTARLMLTEKQTLR
Ga0210404_108971121	3300021088	Soil	MSKAIVRFLAILGALWLIGMVIVMVAVIGAKGKVPSKTILEANFEQSFPEDVPDTPSAQWMMNG
Ga0126371_126048491	3300021560	Tropical Forest Soil	MSKFIVRFLAILGGLWLVGLFIVLIAVIGPKGRIPSRTILEANFEGPLLENIPDTPQARFMLK
Ga0224558_10735613	3300023090	Soil	MSKAIVRFLAILGALWLIGMVIVMVAVIGWKGRVPSKTILEANFEQGLMEDVPDTP
Ga0224558_11727731	3300023090	Soil	MSKLIVRFLAILGALWLIGMVIVMVAVIGWKGRVPSKTILEANFEQGLMEDVPDTP
Ga0208821_10356601	3300025432	Peatland	MSKLVVRFLAILGALWLIGMVIVLVAVIGTKGKVPSKTILEANFEQSFMEDVPGTPSAQLLLN
Ga0208039_10683511	3300025454	Peatland	MSKLIVRFLAILGALWLIGMVIVLVAVIGTKGKVPSKTILEANFEQTFMEDVPGTPSAQLLLNEKQTLRDLVDAI
Ga0208691_10487022	3300025612	Peatland	MSKAIVRFLAILGALSLIGTAIVMIAVIGVRGEVPSKTILEANFEEAFPEDVPDTPTAHLML
Ga0257166_10513531	3300026358	Soil	MSKAIVRFLAILGALWLIGMVIVLVAVIGAKGRVPSKTILEANFEQSFPEDVPQTPAARLLLAEKQTLRDVV
Ga0179587_111141181	3300026557	Vadose Zone Soil	MSKLIVRFLAILGALWLIGMVIVLVAVIGAKGRVPSKTILEANFEQTFLEDAPDTPTARLML
Ga0208984_10855612	3300027546	Forest Soil	MSKVIVRFLAILGALWLIGMVIVLVAVIGAKGKVPSRTILEANFEQTFLEDAPDTPTARL
Ga0208043_11800641	3300027570	Peatlands Soil	MSKVIVRFLAILGALWLIGMVIVMVAVIGMKGRVPSKTILEANFEQTFMEDVPDTPPAQLLLNEKQTL
Ga0208988_10531561	3300027633	Forest Soil	MSKVIVRFLAILGALWLVAMVIMIVAVIGTKGKVPEKTILEANFEQALPEDVPDSPTAKL
Ga0209517_104259982	3300027854	Peatlands Soil	MSKVIVRFLAILGALWLIGMVIVMVAVIGMKGRVPSKTILEANFEQTFMEDVPDTPPAQLLLNEKQTLRD
Ga0209526_103915531	3300028047	Forest Soil	MSKVIVRFLAILGALWLIGMVIVLVAVIGAKGKVPSKTTLEANFEQTFLEDAPDTPTARL
Ga0137415_113234191	3300028536	Vadose Zone Soil	MSKLILRFLAILGALWLVGMVIVLVAVIGAKGRVPSKTILEANFEQTFLEDAPDTPTARLMLTDKQTLRDV
Ga0257175_10588061	3300028673	Soil	MSKAIVRFLAILGALWLIGMVIVMVAVIGVKGKVPSKTILEANFEQTFLEDVPETPSAQLLLTEK
Ga0311361_102431421	3300029911	Bog	MSKAIVRFFAILGALSLIGTVIVLVDVIGAKGSVPSKTILEANFEQTFLEDAPETPTARLLLARKETLRDVVD
Ga0311359_108800181	3300029914	Bog	MSKAIVRFLAILGALCLIGMVIVMVSVIGMKGKVPSKTILEANFEEAFPEDIPNTPTAQLMLNQRQTLRDVLDAMDRGASD
Ga0311326_101325481	3300029917	Bog	MSKAIIRFLAILGALSLLSTAVVLIAVIGAKGRVPSKTILEADFEQTYLENSPETATAQLLLSDKET
Ga0302194_101200051	3300030506	Bog	MSKAIIRFLAILGALSLLSTAVVLIAVIGAKGRVPSKTILEADFEQTYLENSPETATAQLLLSDKETL
Ga0311354_111905832	3300030618	Palsa	MSKLIVRFLAILGALWLIGMVIVLVFVIGSKARVPSRTILEANFEQTFLEDAPQTPTAQLMLTEKQT
Ga0311345_102895461	3300030688	Bog	MSKAIVRFFAILGALSLIGTVIVLVDVVGAKGSVPSKTILEANFEQTFLEDAPETPTARLLLARKETLR
Ga0302324_1035970071	3300031236	Palsa	MSKAIVRFFAILGALSLIGTVIVLVDVIGAKGSVPSKTILEANFEQTFLENAPETPTARLLLARKETLRDVVDAI
Ga0302326_131210201	3300031525	Palsa	MSKAIVRVLAILGALSLIGMVLVLVAMLGAKGRVPSRTILEANFEQSFLEDVPDTPAARELLTDKQTL
Ga0302319_105574501	3300031788	Bog	MSKAIVRFFAILGALSLIGTVIVLVDVIGAKGSVPSKTILEANFEQTFLEDAPETPTARLLLARKE
Ga0307473_114751112	3300031820	Hardwood Forest Soil	MSKAIVRFLAILGALWLITMVILIVAVIGSKGKVPDKTILEANFEQALPEDIPDSPTAKFMMSE
Ga0335076_117429001	3300032955	Soil	MSKLVVRFLAILGALWLISMVMILAFVIGMKGSVLSKTILEANFEQPFAEQIPDSPTAHFTMSDRETLRDVIDAIDRGAED
Ga0326728_108698561	3300033402	Peat Soil	MSNLIVRFLAILGALWLIGMVIVLVAVIGWKGKVPSKTILEANFEKAFMEDVPDTPSAHLLLSDRQTL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098790

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences