Metagenome / Metatranscriptome Family F098797

Basic Information
Family ID	F098797
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	81 residues
Representative Sequence	MDTFAEIHNVDRLNGFVMLLAEDSKIHANHHPPTLEDVQRRACEIHHEHGAVTGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Number of Associated Samples	74
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.32 %
% of genes near scaffold ends (potentially truncated)	28.16 %
% of genes from short scaffolds (< 2000 bps)	67.96 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (57.282 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.184 % of family members)
Environment Ontology (ENVO)	Unclassified (54.369 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.223 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.46% β-sheet: 0.00% Coil/Unstructured: 58.54%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01197	Ribosomal_L31	14.56
PF01565	FAD_binding_4	10.68
PF00990	GGDEF	8.74
PF07238	PilZ	5.83
PF08031	BBE	2.91
PF00989	PAS	0.97
PF01648	ACPS	0.97
PF00196	GerE	0.97
PF01774	UreD	0.97
PF02371	Transposase_20	0.97
PF04055	Radical_SAM	0.97
PF07676	PD40	0.97
PF00005	ABC_tran	0.97
PF14020	DUF4236	0.97
PF02518	HATPase_c	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0254	Ribosomal protein L31	Translation, ribosomal structure and biogenesis [J]	14.56
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	2.91
COG0829	Urease accessory protein UreH	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.28 %
Unclassified	root	N/A	42.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.28 %
Unclassified	root	N/A	42.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.28 %
Unclassified	root	N/A	42.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001098\|JGI12633J13313_101348	Not Available	1447	Open in IMG/M
3300001471\|JGI12712J15308_10035369	Not Available	1285	Open in IMG/M
3300004092\|Ga0062389_100021854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4536	Open in IMG/M
3300005434\|Ga0070709_10127724	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300005435\|Ga0070714_100114361	All Organisms → cellular organisms → Bacteria → Acidobacteria	2394	Open in IMG/M
3300005435\|Ga0070714_100200805	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300005436\|Ga0070713_100353150	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300005437\|Ga0070710_10214274	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300005536\|Ga0070697_100195270	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300005538\|Ga0070731_10030223	All Organisms → cellular organisms → Bacteria → Acidobacteria	3671	Open in IMG/M
3300005538\|Ga0070731_10148430	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300005542\|Ga0070732_10108649	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300005542\|Ga0070732_10183485	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300005602\|Ga0070762_10150599	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300005602\|Ga0070762_10610641	Not Available	725	Open in IMG/M
3300005610\|Ga0070763_10366230	Not Available	805	Open in IMG/M
3300005764\|Ga0066903_101331057	Not Available	1344	Open in IMG/M
3300006028\|Ga0070717_10085884	All Organisms → cellular organisms → Bacteria	2648	Open in IMG/M
3300006028\|Ga0070717_11654976	Not Available	579	Open in IMG/M
3300006893\|Ga0073928_10000476	All Organisms → cellular organisms → Bacteria	94780	Open in IMG/M
3300010048\|Ga0126373_10002938	All Organisms → cellular organisms → Bacteria	12621	Open in IMG/M
3300010048\|Ga0126373_12781056	Not Available	546	Open in IMG/M
3300011120\|Ga0150983_15795893	Not Available	547	Open in IMG/M
3300012677\|Ga0153928_1102094	Not Available	552	Open in IMG/M
3300012924\|Ga0137413_10800650	Not Available	724	Open in IMG/M
3300012971\|Ga0126369_10577707	Not Available	1191	Open in IMG/M
3300016270\|Ga0182036_10009119	All Organisms → cellular organisms → Bacteria	5193	Open in IMG/M
3300016319\|Ga0182033_10031180	All Organisms → cellular organisms → Bacteria → Acidobacteria	3408	Open in IMG/M
3300020199\|Ga0179592_10068089	All Organisms → cellular organisms → Bacteria → Acidobacteria	1628	Open in IMG/M
3300020579\|Ga0210407_10033929	All Organisms → cellular organisms → Bacteria	3796	Open in IMG/M
3300020579\|Ga0210407_10127178	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300020580\|Ga0210403_10009543	All Organisms → cellular organisms → Bacteria	7944	Open in IMG/M
3300020580\|Ga0210403_10439168	Not Available	1064	Open in IMG/M
3300020581\|Ga0210399_10002090	All Organisms → cellular organisms → Bacteria	15531	Open in IMG/M
3300020581\|Ga0210399_10032916	All Organisms → cellular organisms → Bacteria	4143	Open in IMG/M
3300020582\|Ga0210395_10559833	Not Available	859	Open in IMG/M
3300020582\|Ga0210395_10563283	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300020583\|Ga0210401_10002353	All Organisms → cellular organisms → Bacteria	21025	Open in IMG/M
3300020583\|Ga0210401_10101576	All Organisms → cellular organisms → Bacteria → Proteobacteria	2701	Open in IMG/M
3300021088\|Ga0210404_10833229	Not Available	527	Open in IMG/M
3300021168\|Ga0210406_10484808	Not Available	979	Open in IMG/M
3300021171\|Ga0210405_10007942	All Organisms → cellular organisms → Bacteria → Acidobacteria	9247	Open in IMG/M
3300021171\|Ga0210405_10480773	Not Available	974	Open in IMG/M
3300021178\|Ga0210408_10207217	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300021180\|Ga0210396_10095376	All Organisms → cellular organisms → Bacteria	2693	Open in IMG/M
3300021401\|Ga0210393_10376020	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300021401\|Ga0210393_10980695	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300021402\|Ga0210385_10709231	Not Available	770	Open in IMG/M
3300021403\|Ga0210397_10471408	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300021403\|Ga0210397_11120777	Not Available	611	Open in IMG/M
3300021407\|Ga0210383_10094860	All Organisms → cellular organisms → Bacteria → Acidobacteria	2507	Open in IMG/M
3300021432\|Ga0210384_11148374	Not Available	680	Open in IMG/M
3300021433\|Ga0210391_11333202	Not Available	553	Open in IMG/M
3300021477\|Ga0210398_11520548	Not Available	520	Open in IMG/M
3300021478\|Ga0210402_10518557	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300021560\|Ga0126371_10000704	All Organisms → cellular organisms → Bacteria → Acidobacteria	27967	Open in IMG/M
3300022504\|Ga0242642_1033116	Not Available	755	Open in IMG/M
3300022557\|Ga0212123_10000144	All Organisms → cellular organisms → Bacteria	240780	Open in IMG/M
3300025898\|Ga0207692_10433278	Not Available	825	Open in IMG/M
3300025906\|Ga0207699_10034344	All Organisms → cellular organisms → Bacteria → Acidobacteria	2876	Open in IMG/M
3300025939\|Ga0207665_10046953	All Organisms → cellular organisms → Bacteria → Acidobacteria	2894	Open in IMG/M
3300027070\|Ga0208365_1048923	Not Available	567	Open in IMG/M
3300027071\|Ga0209214_1023624	Not Available	797	Open in IMG/M
3300027173\|Ga0208097_1015060	Not Available	857	Open in IMG/M
3300027326\|Ga0209731_1010151	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300027605\|Ga0209329_1005431	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300027635\|Ga0209625_1001793	All Organisms → cellular organisms → Bacteria	4931	Open in IMG/M
3300027635\|Ga0209625_1047735	Not Available	955	Open in IMG/M
3300027635\|Ga0209625_1118204	Not Available	594	Open in IMG/M
3300027635\|Ga0209625_1156441	Not Available	508	Open in IMG/M
3300027855\|Ga0209693_10240893	Not Available	887	Open in IMG/M
3300027867\|Ga0209167_10008105	All Organisms → cellular organisms → Bacteria → Acidobacteria	5056	Open in IMG/M
3300027889\|Ga0209380_10007753	All Organisms → cellular organisms → Bacteria → Acidobacteria	6364	Open in IMG/M
3300027908\|Ga0209006_10009164	All Organisms → cellular organisms → Bacteria → Acidobacteria	8933	Open in IMG/M
3300028047\|Ga0209526_10016806	All Organisms → cellular organisms → Bacteria	5075	Open in IMG/M
3300030730\|Ga0307482_1173519	Not Available	641	Open in IMG/M
3300031057\|Ga0170834_101818726	Not Available	571	Open in IMG/M
3300031057\|Ga0170834_110188056	All Organisms → cellular organisms → Bacteria → Acidobacteria	3778	Open in IMG/M
3300031122\|Ga0170822_11376744	Not Available	519	Open in IMG/M
3300031231\|Ga0170824_106982391	All Organisms → cellular organisms → Bacteria → Acidobacteria	1649	Open in IMG/M
3300031474\|Ga0170818_114405584	Not Available	715	Open in IMG/M
3300031715\|Ga0307476_10202379	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300031715\|Ga0307476_10604982	Not Available	813	Open in IMG/M
3300031715\|Ga0307476_10650655	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300031718\|Ga0307474_10107656	All Organisms → cellular organisms → Bacteria → Acidobacteria	2086	Open in IMG/M
3300031718\|Ga0307474_10307791	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300031718\|Ga0307474_10914281	Not Available	694	Open in IMG/M
3300031719\|Ga0306917_10626761	Not Available	846	Open in IMG/M
3300031720\|Ga0307469_10006316	All Organisms → cellular organisms → Bacteria	5387	Open in IMG/M
3300031753\|Ga0307477_10065290	All Organisms → cellular organisms → Bacteria → Acidobacteria	2512	Open in IMG/M
3300031753\|Ga0307477_10106329	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300031754\|Ga0307475_10172431	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300031754\|Ga0307475_10330347	Not Available	1224	Open in IMG/M
3300031754\|Ga0307475_11048826	Not Available	639	Open in IMG/M
3300031754\|Ga0307475_11327406	Not Available	556	Open in IMG/M
3300031896\|Ga0318551_10534843	Not Available	674	Open in IMG/M
3300031912\|Ga0306921_10000401	All Organisms → cellular organisms → Bacteria → Acidobacteria	37304	Open in IMG/M
3300031962\|Ga0307479_10096434	All Organisms → cellular organisms → Bacteria → Acidobacteria	2871	Open in IMG/M
3300031962\|Ga0307479_10218372	All Organisms → cellular organisms → Bacteria → Acidobacteria	1879	Open in IMG/M
3300031962\|Ga0307479_11116466	Not Available	754	Open in IMG/M
3300032180\|Ga0307471_101013842	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300032205\|Ga0307472_100481133	Not Available	1064	Open in IMG/M
3300032205\|Ga0307472_102574255	Not Available	518	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.03%
Host-Associated	Host-Associated	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.12%
Aquatic	Environmental → Aquatic	2.91%
Fungi	Host-Associated → Fungi	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.12%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Mycelium	Host-Associated → Fungi → Mycelium	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.02%
Loam	Environmental → Terrestrial → Soil → Loam	30.10%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.68%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.97%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.18%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	19.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.88%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.97%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001098	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12633J13313_1013482	3300001098	Forest Soil	MYGRQNWKRKRNCLRKGLFMDTFAQIHKVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH*
JGI12712J15308_100353693	3300001471	Forest Soil	MYSRQNWKRKRNCLRKGLFMGTFAQIHKVSGLNKVAVSFDEDSKAHANHHPPTLEDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH*
Ga0062389_1000218547	3300004092	Bog Forest Soil	MNSFEELHSADRFDNAGMRFEKDSEIHVNHHPPTLDEVQRLARRIHHEHGGVTGGYTLDDWLEAEHELEDIDGSVTDNQV
Ga0070709_101277241	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDTFAEIHNVDRLNGFVMLLAEDSKIHANHHPPTLEDVQRRACEIHYEHGAVTGGYTLDEWLEAEHELEDTGGPESENDRVH*
Ga0070714_1001143611	3300005435	Agricultural Soil	MDTFAEIHNVDRLNGFVMLLAEDSKIHANHHPPTLEDVQRRACEIHHEHGAVTGGYTLDEWLEAEHELEGTDGPDSGNDLVH*
Ga0070714_1002008051	3300005435	Agricultural Soil	MDTFAELHNVDRLNRLVMLLEEDSKIHANHHPPTLEDVQRRACKIHHEHGAVTGGYTLDEWLEAEHELEDTDGLE
Ga0070713_1003531502	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDTFAEIHNVDRLNGLVMLLAEDSKIHANHHPPTLEDVQRRACEIHHEHGAVTGGYTLDEWLEAEHELEDTDGPESENDRVH*
Ga0070710_102142742	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MDTFAQIHKVSGLNKVAVSFGEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH*
Ga0070697_1001952701	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDTFAEIHSIDRLTNAVMLFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH*
Ga0070731_100302235	3300005538	Surface Soil	MDTFAQIHNVERLNGLVMLLEEDSKAHGGHHPPTLEEIQRRACEIHHDHGAVTGGYTLDEWLEAEHELEDTDGLDSENDVVH*
Ga0070731_101484302	3300005538	Surface Soil	MDTFGEIHNVGDFHNAVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTDGGNDRVH*
Ga0070732_101086492	3300005542	Surface Soil	MDTFGEIHIGDRFNSVVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHEL
Ga0070732_101834851	3300005542	Surface Soil	MDTFAEIHNVERLNGLVMLLEEDSKAHGGHHPPTLEEIQRRACEIHHDHGAVTGGYTLDEWLEAEHELEDTDGLD
Ga0070762_101505992	3300005602	Soil	MDTFAQIHKVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH*
Ga0070762_106106412	3300005602	Soil	MDTFGEIHNVGDFHNAVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTSDKNEQVH*
Ga0070763_103662301	3300005610	Soil	MDTFGKIHIGDRSNSVTVVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTSDKNEQVH*
Ga0066903_1013310573	3300005764	Tropical Forest Soil	MFAEIHKVERLSKAVLLFEGKSEGHENHHPPSLEDIQRRACEIHHQHGAVSGGYTLDEWLEAEHELEKTDGPDTGNDLVH*
Ga0070717_100858844	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDTFAEIHNVDRLNGLVMLLAEDSKIHANHHPPTLEDVQRRACEIHYEHGAVTGGYTLDEWLEAEHELEDTDGPESENNRV
Ga0070717_116549762	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDTFAEIHNVDRLNGLVMLLEEDSKIHANHHPPTLEDVQRRACEIHHEHGAVTGGYTLDEWLEAEHELEDTDGPESENNRV
Ga0073928_1000047619	3300006893	Iron-Sulfur Acid Spring	MDTFAEIHSVDRLTSAGMLFEKESEIHVNHHPPTLDDVQRRARRLHYEHGGVTGGYTLDDWLEAEHEIENTDGSGDENSQLH*
Ga0126373_100029383	3300010048	Tropical Forest Soil	MDMFAEIHKVERLSKAVLLFEGKSEGHENHHPPSLEDIQRRACEIHHQHGAVSGGYTLDEWLEAEHELEKTDGPDTGNDLVH*
Ga0126373_127810562	3300010048	Tropical Forest Soil	MDTSAEIHSVERFSKTVLLFEGRSEGHANHHPPSLEDIQRRACEIHHQHGAVSGGYTLDEWLEAEHELEKTDGPDAENDLVH*
Ga0150983_157958931	3300011120	Forest Soil	WKRKRNCLRKGLFMDTFAQIHKVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH*
Ga0153928_11020941	3300012677	Attine Ant Fungus Gardens	MDTFAEIHSADRLTNVVMLFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH*
Ga0137413_108006502	3300012924	Vadose Zone Soil	MDTFAEIHNGDRLNRFVMRLEEDSKIHANHHPPTLEDVQRRACEIHHEHGAVNGGYTLDEWLEAEHELEDTDGPDSENNLVH*
Ga0126369_105777072	3300012971	Tropical Forest Soil	MDMFAEIHKVERLSKAVLLFEGKPEGHENHHPPSLEDIQRRACEIHHQHGAVSGGYTLDEWLEAEHELEKTDGPDTGNDLVH*
Ga0182036_100091194	3300016270	Soil	MFAEIHKVERLSKAVLLFEGKSEGHENHHPPSLEDIQRRACEIHHQHGAVSGAYTLDEWLEAEHELEKTDGPDTGNDLVH
Ga0182033_100311802	3300016319	Soil	MFAEIHKVERLSKAVLLFEGKPEGHENHHPPSLEDIQRRACEIHHQHGAVSGGYTLDEWLEAEHELEKTDGPDTGNDLVH
Ga0179592_100680893	3300020199	Vadose Zone Soil	MGTFAEIHNVDRLNRFVMRLEEDSKIHANHHPPTLEDVQRRACEIHHEHGAVNGGYTLDEWLEAEHELEDTDGPDSENNLVH
Ga0210407_100339292	3300020579	Soil	MDTFVQIHKVSGLNKVAVLFDEDSKARANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Ga0210407_101271782	3300020579	Soil	MDTFGKIHIGDRSNTVTVLVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTDAGNDRVH
Ga0210403_100095436	3300020580	Soil	MDTFAQIHKVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Ga0210403_104391682	3300020580	Soil	MDTFGEIHNVGDFHNAVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTDAGNDRVH
Ga0210399_1000209012	3300020581	Soil	MDTFAQIHKVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHERGSVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Ga0210399_100329165	3300020581	Soil	MDTFGQIHIGDRFNSVTVVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTSDKNEQVH
Ga0210395_105598331	3300020582	Soil	MDTFGKIHIGDRSNTVTVVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGMSDKNEQVH
Ga0210395_105632832	3300020582	Soil	MDTFAQIHKVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGP
Ga0210401_1000235312	3300020583	Soil	MDTFAQIHKVSGLNKVAALFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Ga0210401_101015762	3300020583	Soil	MDTFGEIHNVGDFHTVPVLVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTDAGNDRVH
Ga0210404_108332291	3300021088	Soil	MDTFGEIHIGDRFNSVVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTDAGNDRVH
Ga0210406_104848082	3300021168	Soil	MDTFGEIHNVGDFHNAVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTDGGNDRVH
Ga0210405_100079424	3300021171	Soil	MDTFAEIHNVDRLNGFVMLLEEDSKIHANHHPPTLQEVQRRACEIHHEHGAVTGGYTLDEWLEAEHELEDTDGLDSENNRVH
Ga0210405_104807732	3300021171	Soil	MDAFAQIHKVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Ga0210408_102072172	3300021178	Soil	MDTFGEIHNVGDFHNAVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTSDKNEQVH
Ga0210396_100953762	3300021180	Soil	MDTFGEIHIGDRFNSAVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTDAGNDRVH
Ga0210393_103760201	3300021401	Soil	MDTFAQIHKVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHEL
Ga0210393_109806951	3300021401	Soil	MDTFGEIHIGDRFNSVVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTSDKNE
Ga0210385_107092311	3300021402	Soil	VTVLVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTDAGNDRVH
Ga0210397_104714081	3300021403	Soil	MDTFGEIHNVGDFHNAVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTS
Ga0210397_111207772	3300021403	Soil	METFAQIHKVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Ga0210383_100948602	3300021407	Soil	MDTFAQIHRVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Ga0210384_111483741	3300021432	Soil	LPEEEALMDTFGEIHIGDRFNSVVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTSDKNEQVH
Ga0210391_113332021	3300021433	Soil	MDTFGEIHIGDRFNSVVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTS
Ga0210398_115205481	3300021477	Soil	KRNCLRKGLFMDTFAQIHKVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Ga0210402_105185572	3300021478	Soil	LPEEEALMDTFGEIHNVGDFHNAVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTDGGNDRVH
Ga0126371_1000070417	3300021560	Tropical Forest Soil	MFAEIHKVERLSKAVLLFEGKSEGHENHHPPSLEDIQRRACEIHHQHGAVSGGYTLDEWLEAEHELEKTDGPDTGNDLVH
Ga0242642_10331161	3300022504	Soil	KLPEEEALMDTFGKIHIGDRSNTVPVSVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTDAGNDRVH
Ga0212123_10000144152	3300022557	Iron-Sulfur Acid Spring	MDTFAEIHSVDRLTSAGMLFEKESEIHVNHHPPTLDDVQRRARRLHYEHGGVTGGYTLDDWLEAEHEIENTDGSGDENSQLH
Ga0207692_104332782	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MDTFAEIHNVDRLNGLVMLLAEDSKIHANHHPPTLEDVQRRACEIHHEHGAVTGGYTLDEWLEAEHELEGTDGPDS
Ga0207699_100343444	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MDTFAEIHNVDRLNGFVMLLAEDSKIHANHHPPTLEDVQRRACKIHHEHGAVTGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Ga0207665_100469531	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MDTFAEIHNVDRLNGLVMLLAEDSKIHANHHPPTLEDVQRRACEIHHEHGAVTGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Ga0208365_10489231	3300027070	Forest Soil	MDTLGEIHSVDRLTNAVMFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH
Ga0209214_10236241	3300027071	Forest Soil	MDTFAEIHNVDRLNGFVMLLEEDSKIRANHHPPTLQDVQRRACEIHHEHGAVTGGYTLDEWLEAEHELEDTGGPESENDRVH
Ga0208097_10150602	3300027173	Forest Soil	MDTFGKIHIGDRFNTVTVVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTSDKNEQVH
Ga0209731_10101512	3300027326	Forest Soil	MDTFPGIHSVDRLTNAVMLFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH
Ga0209329_10054312	3300027605	Forest Soil	MDAFAEIHSVDRLTNAVMLFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH
Ga0209625_10017931	3300027635	Forest Soil	MDTFAEIHSVDRLTNTLMLFEKETEIHVNHIPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSG
Ga0209625_10477351	3300027635	Forest Soil	FMDTFTEIHSVDRLTNAVMLFEKELEIHVNHHTPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH
Ga0209625_11182041	3300027635	Forest Soil	MDTFPEIHSVDRLTNAVMLFEKESETHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH
Ga0209625_11564411	3300027635	Forest Soil	MDTFAQIHKVSGLNKVAALFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDS
Ga0209693_102408931	3300027855	Soil	MDTFGKIHIGDRSNSVTVVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGTSDKNEQVH
Ga0209167_100081057	3300027867	Surface Soil	MDTFAQIHNVERLNGLVMLLEEDSKAHGGHHPPTLEEIQRRACEIHHDHGAVTGGYTLDEWLEAEHELEDTDGLDSENDVVH
Ga0209380_100077532	3300027889	Soil	MDTFAQIHKVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPESGNDLVH
Ga0209006_100091648	3300027908	Forest Soil	MGTFAQIHKVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Ga0209526_100168066	3300028047	Forest Soil	MDTFAQIHKVSVLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Ga0307482_11735191	3300030730	Hardwood Forest Soil	KRAFMDTFAQIHKVSGLNKVAVLFDEDSKAHANHHPPTLDDVQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEGTDGPDSGNDLVH
Ga0170834_1018187262	3300031057	Forest Soil	MDTFAEFHNVDRLNRLAMLLEEDSKVHANHHPPTLEDVQRRACEIHHEHGAVNGGYTLDEWLEAEHDLEDTDGPDSENNLVH
Ga0170834_1101880563	3300031057	Forest Soil	MDTFAEIHNVDRLNRFVMRLEEDSKIHANHHPPTLEDVQRRACEIHHEHGAVNGGYTLDEWLEAEHELEDTDGRDSENNLVH
Ga0170822_113767441	3300031122	Forest Soil	MDTFAEIHNVDRLNRFVMRLEEDSKIHANHHPPTLEDVQRRACEIHHEHGAVNGGYTLDEWLEAEHDLEETDGPGDENNLVH
Ga0170824_1069823911	3300031231	Forest Soil	GEKKLPEEEALMDTFAEIHSLDRLHRFVMLLEEDSKIDADHHQATLEDIQRRACEIHHEHGAVTGGYTLDEWLEAEHDLEETDGPGDENNLVH
Ga0170818_1144055841	3300031474	Forest Soil	LPEEEALMDTFAEIHSLDRLHRFVMLLEEDSKIDADHHQATLEDIQRRACEIHHEHGAVTGGYTLDEWLEAEHDLEETDGPGDENNLVH
Ga0307476_102023792	3300031715	Hardwood Forest Soil	MDTFAEIHSVDRLTNTLMLFEKKSEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH
Ga0307476_106049822	3300031715	Hardwood Forest Soil	MDTFGEIHIGDRFNTVTVVGLSDEKSEGHAHHHPPTLGDIQRRAFQIHHEHGAVNGGYTLDEWLEAEHELEDTDGTSDKNEQVH
Ga0307476_106506551	3300031715	Hardwood Forest Soil	MDTFGEIHNVGDFHNAVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELE
Ga0307474_101076561	3300031718	Hardwood Forest Soil	MDTFAEIHSADRLTNVVMLFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH
Ga0307474_103077912	3300031718	Hardwood Forest Soil	MDTFGEIHSVDRLTNAVMLFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGD
Ga0307474_109142811	3300031718	Hardwood Forest Soil	MDTFAEIHSVDRLTSAVMLFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTD
Ga0306917_106267612	3300031719	Soil	MFAEIHKVRLSKAVLLFEGKSEGHENHHPPSLEDIQRRACEIHHQHGAVSGAYTLDEWLEAEHELEKTDGPDTGNDLVH
Ga0307469_100063163	3300031720	Hardwood Forest Soil	MDTFAEIHNVNRLNRFVMLFEEDSKVDANHHPPTLEDVQRRACEIHHEHGAVTGGYTLDEWLEAEHELEDTDGPDSENNLVN
Ga0307477_100652902	3300031753	Hardwood Forest Soil	MDTFGEIHSVDRLTNAVMLFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH
Ga0307477_101063292	3300031753	Hardwood Forest Soil	MDTFAEIHSVDRLTSAVMLFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGPGDENNQLH
Ga0307475_101724312	3300031754	Hardwood Forest Soil	MDSFTEIHSVDRLTNAVMLFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENQLH
Ga0307475_103303471	3300031754	Hardwood Forest Soil	GEIEEKRRNCVRKRPFMDTFAEIHSVDRLTSAVMLFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH
Ga0307475_110488262	3300031754	Hardwood Forest Soil	DTFAEIHSVDRLTSAVMLFEKKSEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGPGDENNQLH
Ga0307475_113274061	3300031754	Hardwood Forest Soil	MDTFTEIHSVDRLTNAVMLFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELEDTDGTGDENSQ
Ga0318551_105348432	3300031896	Soil	MCAEIHKVRLSKAVLLFEGKSEGHENHHPPSLEDIQRRACEIHHQHGAVSGGYTLDEWLEAEHELEKTDGPDTGNDLVH
Ga0306921_100004013	3300031912	Soil	MFAEIHKVRLSKAVLLFEGKSEGHENHHPPSLEDIQRRACEIHHQHGAVSGGYTLDEWLEAEHELEKTDGPDTGNDLVH
Ga0307479_100964341	3300031962	Hardwood Forest Soil	NTVTVVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDGASDKNEQVH
Ga0307479_102183721	3300031962	Hardwood Forest Soil	MDTFAEIHSVDRLTSAVMLFEKESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH
Ga0307479_111164661	3300031962	Hardwood Forest Soil	MDTFPGIHSVDRLTNAVMLFEKESEIRVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH
Ga0307471_1010138422	3300032180	Hardwood Forest Soil	MDTFGEIHNVGDFHNAVVLSDEKSEGHAHHHPPTLGDIQRRAFEIHHEHGAVNGGYTLDEWLEAEHELEDTDG
Ga0307472_1004811331	3300032205	Hardwood Forest Soil	MDTLGEIHSVDRLTNAVMLFDRESEIHVNHHPPTLDDVQRRARRIHHEHGGVTGGYTLDDWLEAEHELENTDGSGDENNQLH
Ga0307472_1025742552	3300032205	Hardwood Forest Soil	MDTFAELHNVDRLNRLVMLLEEDSKIHANHHPPTLADVQRRAYEIHHEHGAVTGGYTLDEWLEAEHELEGTDGPDSGNDLVH

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098797

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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