Metagenome / Metatranscriptome Family F098800

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F098800
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	41 residues
Representative Sequence	MALYDDTGFVSHHDAEQALESARDYIGVIRADITARKP
Number of Associated Samples	94
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.56 %
% of genes near scaffold ends (potentially truncated)	15.53 %
% of genes from short scaffolds (< 2000 bps)	16.50 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (82.524 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (14.563 % of family members)
Environment Ontology (ENVO)	Unclassified (37.864 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.951 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.88% β-sheet: 0.00% Coil/Unstructured: 62.12%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01909	NTP_transf_2	4.85
PF00206	Lyase_1	2.91
PF02321	OEP	2.91
PF13620	CarboxypepD_reg	1.94
PF12838	Fer4_7	1.94
PF07927	HicA_toxin	1.94
PF00929	RNase_T	0.97
PF02604	PhdYeFM_antitox	0.97
PF00496	SBP_bac_5	0.97
PF04851	ResIII	0.97
PF02852	Pyr_redox_dim	0.97
PF07878	RHH_5	0.97
PF13545	HTH_Crp_2	0.97
PF09907	HigB_toxin	0.97
PF03459	TOBE	0.97
PF01180	DHO_dh	0.97
PF11154	DUF2934	0.97
PF04956	TrbC	0.97
PF08327	AHSA1	0.97
PF02661	Fic	0.97
PF03631	Virul_fac_BrkB	0.97
PF09925	DUF2157	0.97
PF07676	PD40	0.97
PF12161	HsdM_N	0.97
PF10017	Methyltransf_33	0.97
PF02687	FtsX	0.97
PF01266	DAO	0.97
PF01370	Epimerase	0.97
PF13173	AAA_14	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	5.83
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	1.94
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.97
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.97
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	0.97
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.97
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.97
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.97
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.97
COG3838	Type IV secretory pathway, VirB2 component (pilin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.97
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
All Organisms	root	All Organisms	17.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
cellular organisms	root	All Organisms → cellular organisms	17.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.94 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.94 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.97 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.94 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.94 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.94 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.94 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.97 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005340\|Ga0070689_100535511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1007	Open in IMG/M
3300005457\|Ga0070662_101670479	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300006881\|Ga0068865_101284539	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300009038\|Ga0099829_10974267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300009518\|Ga0116128_1050612	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300010371\|Ga0134125_10410722	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300017931\|Ga0187877_1063897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1627	Open in IMG/M
3300017972\|Ga0187781_10491759	All Organisms → cellular organisms → Bacteria → Acidobacteria	880	Open in IMG/M
3300018020\|Ga0187861_10414107	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300018022\|Ga0187864_10413974	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300018090\|Ga0187770_10458927	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300021168\|Ga0210406_10000652	All Organisms → cellular organisms → Bacteria	46748	Open in IMG/M
3300025459\|Ga0208689_1034855	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300025496\|Ga0208191_1100685	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	588	Open in IMG/M
3300025501\|Ga0208563_1107237	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300026023\|Ga0207677_12205249	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031525\|Ga0302326_13240506	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300034124\|Ga0370483_0095083	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.12%
Host-Associated	Host-Associated	3.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.19%
Aquatic	Environmental → Aquatic	35.92%
Plants	Host-Associated → Plants	3.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.49%
Freshwater	Environmental → Aquatic → Freshwater	33.98%
Peat	Environmental → Terrestrial → Peat	9.71%
Sediment	Environmental → Aquatic → Sediment	1.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	33.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.71%
Loam	Environmental → Terrestrial → Soil → Loam	2.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.94%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	9.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	14.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	9.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.91%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.94%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.94%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.94%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.97%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.97%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.97%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.97%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033821	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-X0	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25616J43925_103238051	3300002917	Grasslands Soil	LRRKRNMALYDDTGFVSHHDAESALESARDYLDVIRADIAARRP*
Ga0062385_112759631	3300004080	Bog Forest Soil	MALHDDAGFVSHHNAEQALESTRDYLGVIRADIAARKPRRASD*
Ga0062387_1017779992	3300004091	Bog Forest Soil	LRRKRNMALYGDIGLVSHHEAEQALETARDYLGIIRAKVSARKP*
Ga0070689_1005355111	3300005340	Switchgrass Rhizosphere	VFDSFRRKRKLALYDDTAFVSHQDAEQSLEAARDYLAVICADVTARKP*
Ga0070662_1016704791	3300005457	Corn Rhizosphere	FRRKRKLALYDDTAFVSHQDAEQSLEAARDYLAVICADVTARKP*
Ga0066704_100444775	3300005557	Soil	MALYDDTGFVSHHDAEQALEAARDYLGVVRADITARKP*
Ga0066903_1049677301	3300005764	Tropical Forest Soil	RNLAPYGDIGFVSHHEAQWLEAAENYLKVIRADILTRKR*
Ga0097691_10525001	3300006055	Arctic Peat Soil	LRRKRNLALYDDTGFVSQRDAEQALESARDYLNVIRSDIAARRP*
Ga0068865_1012845391	3300006881	Miscanthus Rhizosphere	GLLTVFDSFRRKRKLALYDDTAFVSHQDAEQSLEAARDYLAVICADVTARKP*
Ga0099829_109742672	3300009038	Vadose Zone Soil	FDRLRRKRNMALYDDTGFVSHHDAEQALEAARDYLGVMRADITVRRP*
Ga0116128_10202061	3300009518	Peatland	MALYDDSGFVSHHEAEQALESAGDYLNVIRADIAARKP*
Ga0116128_10506123	3300009518	Peatland	LFDRLRRKRNVALYDDTGFVSRHEAEEALESARNFIDVIRADITARKP*
Ga0116111_11114692	3300009616	Peatland	RRKRNTALYDDTGFVSHHDAEQALESAGDYLNVIRADITGRKP*
Ga0116127_10452853	3300009618	Peatland	RNVALYDDTGFVSRHEAEEALESARNFIDVIRADITARKP*
Ga0116125_11410772	3300009628	Peatland	ALYDDTGFVSYHDAEQALESAGDYLNVIRADIVARKP*
Ga0116120_12768561	3300009641	Peatland	YDDTGFVSRHEAEEALESARNFIDVIRADITARKA*
Ga0116134_11434181	3300009764	Peatland	NTALYDDTAFVSRHDAEEAITTARDYLAVIGADIHARRPKA*
Ga0116219_107129792	3300009824	Peatlands Soil	LYDDSGFVSHHEAEQALESAGEYLNMIRADVAARKP*
Ga0126373_114028241	3300010048	Tropical Forest Soil	RLRRKRNMALYDDTGFISRQDAEQALESARQLIEVIRADVNSRKP*
Ga0099796_105505972	3300010159	Vadose Zone Soil	FDGLRRKRNLALYDDTGFISRQDAEYSLDAARDYIGVIRADIATRKP*
Ga0134111_105012891	3300010329	Grasslands Soil	RNLALYDDTGFVSHHDAEQALESARQYLDVIRADIAGRKP*
Ga0074046_107765112	3300010339	Bog Forest Soil	YDDTGFVSHHDAEQALESAGDYLNVIRADIAARKP*
Ga0074044_100174995	3300010343	Bog Forest Soil	MALYDDAGYVSRHDAEQALESAHDNLGVSRADITARKC*
Ga0134125_104107223	3300010371	Terrestrial Soil	LLTVFDSFRRKRKLALYDDTAFVSHQDAEQSLEAARDYLAVICADVTARKP*
Ga0126381_1014698423	3300010376	Tropical Forest Soil	MALYDDTGFISRQDAEQALESARQLIEVIRADVNSRKP*
Ga0137393_100897981	3300011271	Vadose Zone Soil	RKRNLALYDDTGFVSHHEAEQALQSASDYLKVIRSDIAGRKP*
Ga0137383_104451311	3300012199	Vadose Zone Soil	KRNMALYDDAGFVSRHDAEQALESARDFIGVIRADITARTPSKP*
Ga0137362_106947011	3300012205	Vadose Zone Soil	LYDDTGFVSHHDAEQALESAGDYLNVMRADITARKP*
Ga0137362_110034251	3300012205	Vadose Zone Soil	LRRKRNQALYDDTGFVSHHDAEQALEAARDYLAVVRADITARKP*
Ga0137377_112035782	3300012211	Vadose Zone Soil	KRNMALYDDAGFVSRHDAEQALESARDFIGVIRADITARAPSKP*
Ga0137373_101680684	3300012532	Vadose Zone Soil	MALYDDTGFVSHHDAEQALESAADYLNVMRADIVARKP*
Ga0181524_104620511	3300014155	Bog	TALYDDTGFVSHRDAEQALESAGEYLNVIRADIGDRKP*
Ga0182018_100183434	3300014489	Palsa	MALYDDTGFVSRCNAEQALESAREFITVIRADIDARKT*
Ga0182018_107198662	3300014489	Palsa	LRRKRNIALYDDSGFVSHRDAEEALEIASKYLGVIRTDITSRKP*
Ga0182015_109443892	3300014495	Palsa	LYDDTGFVSRHDAEQALEAAGRYLKIMRADIDARKP*
Ga0182024_125343662	3300014501	Permafrost	LYDDTGFVSRHDAEQALESAGDYLNVIRADIATRKP*
Ga0137405_11787431	3300015053	Vadose Zone Soil	RNMALYDDTGFVSHHEAEQALVSAGDYLNVIRTDIAARKP*
Ga0134072_100873021	3300015357	Grasslands Soil	LYDDTGFVSHHDAEQALEAARDYLGVVRADITARKP*
Ga0187818_102060032	3300017823	Freshwater Sediment	MALYDDTGFISHHDAEQALQSAGDYLNVIRAEIAARKP
Ga0187818_105760241	3300017823	Freshwater Sediment	YDDTGFVSHHEAEQALEVARNYLAVIRANIAARQP
Ga0187856_10469811	3300017925	Peatland	MALYDDSGFVSHHEAEQALESAGDYLNVIRADIAARKP
Ga0187856_10747921	3300017925	Peatland	RLRRKRNTALYDDTGFVSHHDAEQALESAGDYLNVIRVDIAARKP
Ga0187849_11300491	3300017929	Peatland	RNTALYDDTGFVSHHDAEQALESAGDYLNVIRADITGRKP
Ga0187877_10638971	3300017931	Peatland	VFDRLRRKRNTALYDDTGFVSHHDAEQALESAGDYLNVIRADITGRKP
Ga0187803_101163551	3300017934	Freshwater Sediment	MALYDDTGFVSHYEAEQALKAARDYLGLIRADITARRP
Ga0187803_104428941	3300017934	Freshwater Sediment	MALYDDTGFVSHQEAEQALKAARDYLAVIRADITARQP
Ga0187854_101332151	3300017938	Peatland	RNVALYDDTGFVSRHEAEEALESARNFIDVIRADITARKP
Ga0187879_105911741	3300017946	Peatland	NMALYDDTGFVSHHDAEQALESAGEYLKVIRVDIAAREP
Ga0187817_109391092	3300017955	Freshwater Sediment	RLRRKRNMALYDDAGFVSHHEAEQALKAARDYLGVIRADITARQP
Ga0187778_102999902	3300017961	Tropical Peatland	MTLYDDSGFVSYHDAEEAVRAARDYLAVIRADINARKPRCG
Ga0187781_104917594	3300017972	Tropical Peatland	LALYDDTGFVSHRDAEQALEAAGNYLNVIRADIAARKP
Ga0187815_102853331	3300018001	Freshwater Sediment	RKRNMALYDDAGFVSHHEAEQALEAARDYIRVIRADITTRQP
Ga0187865_10461011	3300018004	Peatland	DRLRRKRNMALYDDTGFVSHHEAEEALESAHNFIDVIRADITTRKL
Ga0187878_12462581	3300018005	Peatland	KRNLALYDDTGFVSQHDAKQALQAASDYLAVMRADIIARKP
Ga0187873_10793002	3300018013	Peatland	RRKRNTALYDDSGFVSLHDAEEAITTARDYLAVIGANIDARRPKA
Ga0187866_13387822	3300018015	Peatland	RRKRNTALYDDSGFVSRHDAEEAITTARDYPAVIGADIDARRPKA
Ga0187880_11307262	3300018016	Peatland	NMALYDDSGFVSYHDAEEALQAARNFLGVIRADINTRKP
Ga0187861_104141071	3300018020	Peatland	FDRLRRKRNTALYDDTGFVSHRDAEQALESAGEYLNVIRADIGDRKP
Ga0187864_104139741	3300018022	Peatland	TLFDRLRRKRNVALYDDTGFVSRHEAEEALESARNFIDVIRADITARKP
Ga0187851_104115483	3300018046	Peatland	YDDTGFVSHHDAEQALESAGDYLNVIRADIAARKP
Ga0187770_104589271	3300018090	Tropical Peatland	MFDRLRRKRNVALYDDTGFVSHLDAVEALEAAADYLNVIQADIAVRKP
Ga0187770_117896641	3300018090	Tropical Peatland	RNLALYDDTGFVSRHDAEQALETAREYIAVIRADLDARKP
Ga0187852_14274551	3300019082	Peatland	RRKRNMALYDDTGFVSHHDAEQALQSAGDYLNVIRADIAVRKP
Ga0187797_14942401	3300019284	Peatland	LYDDTGFVSRHDAEQALASAGDYLEVIRADITARKP
Ga0210399_100708604	3300020581	Soil	MALYDDTGFVSHHDAEQALESARDFIEVVRADITARKP
Ga0210406_1000065251	3300021168	Soil	MTTRDLVSHHDAERALEAARDYLEVIRADVTARKP
Ga0210397_116093531	3300021403	Soil	LRRKRNTALYDDTGFVSHHDAEQALESACDYLNVIRVDIAGRKP
Ga0210391_108321282	3300021433	Soil	LYDDIGFVSRHDAEQALETARQYLKVIRTEIGARKP
Ga0209521_100487194	3300025164	Soil	MVLYDDTGFVSHQDAQQALKTAHEYLNVIRADVAARKA
Ga0208689_10348552	3300025459	Peatland	FDRLRRKRNTALYDDSGFVSLHDAEEAITTARDYLAVIGANIDARRPKA
Ga0208191_11006851	3300025496	Peatland	FDRLRRKRNTALYDDTGFVSHHDAEQALESAGDYLNVIRVDIAARKP
Ga0208563_11072371	3300025501	Peatland	LFDRLRRKRNVALYDDTGFVSRHEAEEALESARNFIDVIRADITARKP
Ga0207677_122052492	3300026023	Miscanthus Rhizosphere	VFDSFRRKRKLALYDDTAFVSHQDAEQSLEAARDYLAVICADVTARKP
Ga0209238_100672410	3300026301	Grasslands Soil	MALYDDTGFVSHHDAEQALEAARDYLGVVRADITARKP
Ga0209009_10716122	3300027667	Forest Soil	LYDDTGLVSHHDAEQALESASHYLKVIRNDISARKP
Ga0209588_12391441	3300027671	Vadose Zone Soil	RLRRKRNLALYDDTGFVSRQDAEQALKTARDYIHVIRADITARKP
Ga0209689_11733221	3300027748	Soil	RRKRNMALYDDTGFVSHHDAEQALEAARDYLGVVRADITARKP
Ga0209655_102247841	3300027767	Bog Forest Soil	KRNMALYDDTGFISCHDAEQALEAGHDYSRVLRADIAARKP
Ga0209698_102636631	3300027911	Watersheds	KRNTALYDDTGFVSHHDAEQALESAGDYLNVIRADIVARKP
Ga0209698_109727121	3300027911	Watersheds	TALYDDTGFVSRHDAEQALESAVDYLNVIRADIADRKP
Ga0302144_102215181	3300028560	Bog	SGPYDDTGFVSRHDAEQALESASEYLNVIRTDIVARRP
Ga0302222_101273832	3300028798	Palsa	NAALYDDTGFVSHRDAEQALESAGDYLNIVRVDIAARKP
Ga0222749_102974842	3300029636	Soil	NTALYDDTGFVSHHEAEQSLETARDYLRVIRGDIAVRRP
Ga0302176_103621892	3300030057	Palsa	RRKRNTALYDDTGFVSRHDAEEAITTAHDYLAVIGADIGTRKPKA
Ga0302325_128304391	3300031234	Palsa	RRKRNTALYDDTGFVSRHDAEQALESAGDYLNVIRADIAARKP
Ga0265330_101334692	3300031235	Rhizosphere	MALYEDTGFVSHHDAQHALETAREYLVIIRTNIAARKP
Ga0302324_1017358612	3300031236	Palsa	RNMALYDDSGFVSHHDAEQAIEAARGFLVVIRADINFRKP
Ga0302326_115104002	3300031525	Palsa	MALYDDTGFVSRCNAEQALESAREFITVIRADIDARKT
Ga0302326_132405062	3300031525	Palsa	LFDRLRRKRNMALYDDSGFVSHHDAEQAIEAARGFLVVIRADINSRRP
Ga0310686_1029695121	3300031708	Soil	LYDDTGFVSHHDAEQALESAGDYLNMIRADVAARKP
Ga0306923_125046231	3300031910	Soil	FDRLRRKRNMALYDDTGFVSRHDAEQAMESARNLIGVIRADITARKP
Ga0307472_1018344221	3300032205	Hardwood Forest Soil	FVDETGFVSHHDAERALESAGDYLNVIRADIAARKP
Ga0335085_1000337713	3300032770	Soil	MALYDDAGFVSRHKAEQALEAAREYLGVIHADVTARKP
Ga0335082_100956353	3300032782	Soil	MAIYDDTGFVSHHDAEQALESAREYLGVIRADITAREP
Ga0335079_101243851	3300032783	Soil	MALYDDTGFVSHHDAEQALESARDYIGVIRADITARKP
Ga0335078_101788346	3300032805	Soil	MALYDDTGFVSHHDVEQALESARDYIGVIRADIAARKP
Ga0335076_102239182	3300032955	Soil	MALYDDTGFVSHHDVEQALESARDYLGVIRADITA
Ga0335077_102578342	3300033158	Soil	MALYDDTGFVSHHDAEQALESARDYIGVIRADMTA
Ga0326728_100490713	3300033402	Peat Soil	VRHDDTGFVSRHDPEGALAAADGYLAVIGADIDSRKPKP
Ga0334818_072716_394_516	3300033821	Soil	TALYDDTGFVSRHDAEEAITTARDYLAVIGADIDARRPKA
Ga0334837_127768_370_501	3300033823	Soil	KRNTALYDDTGFVSRHDAEEAITTARDYLAVIGADIDARRPKA
Ga0314861_0337455_547_669	3300033977	Peatland	RDTALYDDTGFVSYHDAEEALKAARDYLGVIGAEINARRP
Ga0370483_0095083_2_145	3300034124	Untreated Peat Soil	FDRLRRKRNTALYDDSGFVSRYDAEQALESARDYLTVIQADIAARKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098800

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences