Metagenome Family F098843

Basic Information
Family ID	F098843
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	103 residues
Representative Sequence	MDVLTEAQVAKVYELTDGLLLNRDWVVVPLVGSPRGMEMLMPDGKVLIRPAGGDRFDAWFADLKTRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYV
Number of Associated Samples	84
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.81 %
% of genes near scaffold ends (potentially truncated)	33.01 %
% of genes from short scaffolds (< 2000 bps)	79.61 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Most Common Taxonomy
Group	Bacteria (66.990 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.621 % of family members)
Environment Ontology (ENVO)	Unclassified (25.243 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (30.097 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.08% β-sheet: 10.77% Coil/Unstructured: 56.15%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF07859	Abhydrolase_3	15.53
PF02082	Rrf2	15.53
PF08669	GCV_T_C	8.74
PF01408	GFO_IDH_MocA	3.88
PF13453	zf-TFIIB	3.88
PF00135	COesterase	2.91
PF00266	Aminotran_5	1.94
PF09339	HTH_IclR	1.94
PF00355	Rieske	0.97
PF03588	Leu_Phe_trans	0.97
PF06491	Disulph_isomer	0.97
PF09471	Peptidase_M64	0.97
PF01592	NifU_N	0.97
PF10518	TAT_signal	0.97
PF01458	SUFBD	0.97
PF14446	Prok-RING_1	0.97
PF00072	Response_reg	0.97
PF00583	Acetyltransf_1	0.97
PF00440	TetR_N	0.97
PF02634	FdhD-NarQ	0.97
PF00005	ABC_tran	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	15.53
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	15.53
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	15.53
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	15.53
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	15.53
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	15.53
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	15.53
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	15.53
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	15.53
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	2.91
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG1526	Formate dehydrogenase assembly factor FdhD, a sulfurtransferase	Energy production and conversion [C]	0.97
COG2360	Leu/Phe-tRNA-protein transferase	Posttranslational modification, protein turnover, chaperones [O]	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.99 %
Unclassified	root	N/A	33.01 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.99 %
Unclassified	root	N/A	33.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.99 %
Unclassified	root	N/A	33.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.01 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	10.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.01 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	10.68 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.01 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	5.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.88 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.01 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	5.83 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.01 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	5.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100700893	All Organisms → cellular organisms → Bacteria	2614	Open in IMG/M
3300000956\|JGI10216J12902_109255951	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300004157\|Ga0062590_100992355	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300004463\|Ga0063356_100518372	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1583	Open in IMG/M
3300004463\|Ga0063356_101298946	Not Available	1064	Open in IMG/M
3300005337\|Ga0070682_101431064	Not Available	592	Open in IMG/M
3300005340\|Ga0070689_101640693	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005444\|Ga0070694_100935965	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005536\|Ga0070697_100518601	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300005536\|Ga0070697_101149869	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005537\|Ga0070730_10042062	All Organisms → cellular organisms → Bacteria	3360	Open in IMG/M
3300005538\|Ga0070731_10001932	All Organisms → cellular organisms → Bacteria	20544	Open in IMG/M
3300005538\|Ga0070731_10191712	All Organisms → cellular organisms → Bacteria → Proteobacteria	1357	Open in IMG/M
3300005538\|Ga0070731_10878925	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005544\|Ga0070686_100575047	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300005545\|Ga0070695_101329458	Not Available	594	Open in IMG/M
3300005615\|Ga0070702_101027612	Not Available	654	Open in IMG/M
3300005618\|Ga0068864_100308576	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1483	Open in IMG/M
3300005829\|Ga0074479_10164705	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300005829\|Ga0074479_10819044	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300005829\|Ga0074479_11154875	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300005836\|Ga0074470_11692104	All Organisms → cellular organisms → Bacteria	90518	Open in IMG/M
3300006046\|Ga0066652_100071132	All Organisms → cellular organisms → Bacteria	2710	Open in IMG/M
3300006845\|Ga0075421_101921906	Not Available	633	Open in IMG/M
3300006854\|Ga0075425_100768356	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300006871\|Ga0075434_100428390	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1344	Open in IMG/M
3300006871\|Ga0075434_101243772	Not Available	756	Open in IMG/M
3300006904\|Ga0075424_100849197	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	974	Open in IMG/M
3300006904\|Ga0075424_102829974	Not Available	505	Open in IMG/M
3300006954\|Ga0079219_10825973	Not Available	734	Open in IMG/M
3300007072\|Ga0073932_1182397	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300007076\|Ga0075435_102011774	Not Available	507	Open in IMG/M
3300009012\|Ga0066710_101013334	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300009094\|Ga0111539_10251619	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300009100\|Ga0075418_10560313	Not Available	1229	Open in IMG/M
3300009146\|Ga0105091_10082284	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300009147\|Ga0114129_11176393	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300009162\|Ga0075423_11986114	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300010391\|Ga0136847_11211440	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300010399\|Ga0134127_10579778	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300010399\|Ga0134127_12441940	Not Available	602	Open in IMG/M
3300010400\|Ga0134122_10150016	All Organisms → cellular organisms → Bacteria → Proteobacteria	1895	Open in IMG/M
3300010400\|Ga0134122_10198251	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300010400\|Ga0134122_11232874	Not Available	751	Open in IMG/M
3300010401\|Ga0134121_12765919	Not Available	536	Open in IMG/M
3300010403\|Ga0134123_10576687	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300010403\|Ga0134123_13176856	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	528	Open in IMG/M
3300011403\|Ga0137313_1063749	Not Available	655	Open in IMG/M
3300011435\|Ga0137426_1049418	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300011437\|Ga0137429_1120761	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300012231\|Ga0137465_1094487	Not Available	895	Open in IMG/M
3300012899\|Ga0157299_10164261	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012913\|Ga0157298_10184756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	655	Open in IMG/M
3300012944\|Ga0137410_10000970	All Organisms → cellular organisms → Bacteria	19749	Open in IMG/M
3300012971\|Ga0126369_13558168	Not Available	510	Open in IMG/M
3300015199\|Ga0167647_1068344	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300017961\|Ga0187778_10047792	All Organisms → cellular organisms → Bacteria	2612	Open in IMG/M
3300017965\|Ga0190266_10465835	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300017965\|Ga0190266_11029990	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300018468\|Ga0066662_11929363	Not Available	618	Open in IMG/M
3300019360\|Ga0187894_10263095	Not Available	811	Open in IMG/M
3300019458\|Ga0187892_10012406	All Organisms → cellular organisms → Bacteria	10135	Open in IMG/M
3300019487\|Ga0187893_10004724	All Organisms → cellular organisms → Bacteria	25521	Open in IMG/M
3300020140\|Ga0179590_1073405	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	904	Open in IMG/M
3300020202\|Ga0196964_10044189	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1871	Open in IMG/M
3300021384\|Ga0213876_10131196	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300021432\|Ga0210384_10155969	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2049	Open in IMG/M
3300024232\|Ga0247664_1173087	Not Available	510	Open in IMG/M
3300024245\|Ga0247677_1075914	Not Available	500	Open in IMG/M
3300024284\|Ga0247671_1034304	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300024288\|Ga0179589_10089495	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1240	Open in IMG/M
3300025324\|Ga0209640_10094600	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300025936\|Ga0207670_11259413	Not Available	627	Open in IMG/M
3300027857\|Ga0209166_10200104	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300027869\|Ga0209579_10001339	All Organisms → cellular organisms → Bacteria	20550	Open in IMG/M
3300027907\|Ga0207428_10171741	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300027909\|Ga0209382_11727678	Not Available	613	Open in IMG/M
3300031538\|Ga0310888_11024314	Not Available	520	Open in IMG/M
3300031576\|Ga0247727_10488347	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	961	Open in IMG/M
3300031716\|Ga0310813_10003140	All Organisms → cellular organisms → Bacteria	9998	Open in IMG/M
3300031716\|Ga0310813_10007006	All Organisms → cellular organisms → Bacteria	7084	Open in IMG/M
3300031716\|Ga0310813_10036934	All Organisms → cellular organisms → Bacteria	3503	Open in IMG/M
3300031716\|Ga0310813_10115051	All Organisms → cellular organisms → Bacteria	2115	Open in IMG/M
3300031716\|Ga0310813_10256379	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300031716\|Ga0310813_10419408	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1155	Open in IMG/M
3300031718\|Ga0307474_10108873	Not Available	2075	Open in IMG/M
3300031740\|Ga0307468_101426771	Not Available	638	Open in IMG/M
3300031754\|Ga0307475_10719340	Not Available	795	Open in IMG/M
3300031765\|Ga0318554_10673523	Not Available	581	Open in IMG/M
3300031768\|Ga0318509_10382948	Not Available	787	Open in IMG/M
3300031782\|Ga0318552_10494777	Not Available	624	Open in IMG/M
3300031912\|Ga0306921_12552882	Not Available	529	Open in IMG/M
3300031944\|Ga0310884_10994469	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300031962\|Ga0307479_10121721	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2546	Open in IMG/M
3300032039\|Ga0318559_10530976	Not Available	549	Open in IMG/M
3300032068\|Ga0318553_10535003	Not Available	614	Open in IMG/M
3300032075\|Ga0310890_10780734	Not Available	755	Open in IMG/M
3300032211\|Ga0310896_10563368	Not Available	632	Open in IMG/M
3300032421\|Ga0310812_10227513	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300032421\|Ga0310812_10348974	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300033412\|Ga0310810_10189731	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2337	Open in IMG/M
3300033805\|Ga0314864_0042080	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300034268\|Ga0372943_0798502	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	625	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.50%
Host-Associated	Host-Associated	16.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.82%
Plants	Host-Associated → Plants	16.50%
Aquatic	Environmental → Aquatic	10.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.62%
Sediment	Environmental → Aquatic → Sediment	7.77%
Cave	Environmental → Terrestrial → Cave	3.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.91%
Freshwater	Environmental → Aquatic → Freshwater	1.94%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.97%
Roots	Host-Associated → Plants → Roots	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.62%
Loam	Environmental → Terrestrial → Soil → Loam	9.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	3.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.97%
Lake	Environmental → Aquatic → Freshwater → Lake	0.97%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.97%
Sand	Environmental → Terrestrial → Soil → Sand	0.97%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.88%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.97%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.97%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.97%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.97%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	7.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.85%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.88%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	3.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.94%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.94%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.97%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.97%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.97%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.97%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.97%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007072	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC9 2012 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1007008933	3300000364	Soil	MMMPMDQVLTEAQVSKVYELTDGLLLNRDWVVVPLIGMVDGMEMLMPDGKILVRPAGGSKFDGWFAGLKTRLESLDISRALRASQLERHYVRTPATAAPGSGARKYVK*
JGI10216J12902_1092559512	3300000956	Soil	MDDILSAERVERIYRLTDGLLLNRDWVVVPLKGSENGLEMVLPDGKLLIRPPSGPGFDTWLTGLKERLEILDLDRALRASQLERHYVRTPAAAPPGSGARKYTSWKA*
Ga0062590_1009923552	3300004157	Soil	MNILSESQVRKVYELTSSLLLNPDWVVVPLVGSPQGMEMLMPDGKILIRPAGGDAFDAWFSGLKTRLESLDLSRALRASQLERHYVRTPAAAAPGSGARKYLK*
Ga0063356_1005183722	3300004463	Arabidopsis Thaliana Rhizosphere	MNVLTEAQVQKVYELTDGLLLNRDWVVVPLVGSSQGMEMLMPDGKILIRPAGGGQFDSWFADLKTRLESLDLSRALRASQLERH
Ga0063356_1012989461	3300004463	Arabidopsis Thaliana Rhizosphere	MDILTEAQVRRVYELTDSLLLNRDWVVVPLVGSANGIEMLMPDGKVLIRPAGGPAFDPWFADLKMRLESLDLSRALRASQLERHYVRT
Ga0070682_1014310641	3300005337	Corn Rhizosphere	MHVLSEAQVRKVYELTDALMLNPDWVVVPLVGAPQGMEMLMPDGKVLIRPAGGEAFDAWFSGLKTRLDALDLSRALRASQLERHYVRTPATAAPGSGARKYVK*
Ga0070689_1016406932	3300005340	Switchgrass Rhizosphere	DALMLNPDWVVVPLVGAPQGMEMLMPDGKVLIRPAGGDAFDAWFSGLKTRLDSLDLSRALRASQLERHYVRTPATAAPGSGARKYVK*
Ga0070694_1009359652	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MDVLSESQVRRVYELTDALLLNPDWVVVPLVGAPLGMEMLMPDGKILIRPAGGEGFEAWFSGLKTRLESLDLSRALRASQLERHYVRTPASAAPGSGARKYVQP*
Ga0070697_1005186012	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDVLSEAQVRKVYELSDALLLNRDWVVVPLVGSPQGMEMLMPDGKILIRPPGGDRFDPWFADLRTRLEALDLSRALRASQLERHYVRTPASAAPGSGARKYLK*
Ga0070697_1011498692	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LGAPARYHGAAMDVLSEAQVRKVYELTDSLLLNQDWVVVPLVGSPRGMEMLMPDGKILIRPVGGAAFEPWFAGLKTRLEALDLSRALRASQLERHYVRTPAAAAPGSGAR
Ga0070730_100420625	3300005537	Surface Soil	MDSVLSEAQVAKIYHLTDSLLLNRDWIVVPLVGSAEGMELLMPDGKVLIRPAGGLKFDAWFSGLKNRLESLDLSRALRASQLERHYVRTPATAAPGSGARRYTK*
Ga0070731_100019322	3300005538	Surface Soil	MDTLLTESQVSKVYELTDALLLNRDWVVVPLVGSPDGMEMLMPDGKILIRPAGGPKFDAWFSGLKTRLEALDISRALRASQLERHYVRTPAAAAPGSGARRYVK*
Ga0070731_101917122	3300005538	Surface Soil	MDTVLTQAQVGKVYELTDSLLLNRDWVVVPLVGSTDGMEMLMPDGKILIRPAGGVKFDGWFSGLKNRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK*
Ga0070731_108789252	3300005538	Surface Soil	MDPVLTEAQVARIYELTDSLLLNRDWVVVPLVGTAEGMEMLMPDGKILIRPAGGAKFDAWFSGLPGRLASLDLSRALRASQLERHYVRTPATAAPGSGARRYVKG*
Ga0070686_1005750471	3300005544	Switchgrass Rhizosphere	MDVLTEAQVAKVYELTDGLLLNRDWVVVPLVGSAHGMEMLMPDGKILIRPAGGDQFDAWFTDLKIRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK*
Ga0070695_1013294582	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MDVLSESQVRRVYELTDALLLNPDWVVVPLVGAPLGMEMLMPDGKILIRPAGGEGFEAWFSGLKTRLESLDLSRALRASQLERHYVR
Ga0070702_1010276122	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MDTVLTEAQVAKVYDLTDTLLLNRDWVVVPLIGSPEGLEMLMPDGKILIRPAGSGRYDGWFAGLKTRLESLDLSRALRASQLERHYVRTPAAAAPGSGARKYVK*
Ga0068864_1003085764	3300005618	Switchgrass Rhizosphere	MDTVLTEAQVAKVYELTDGLELNRDWVVVPLIGAPDGLEMLMPDGKILIRPAGGGRYDAWFAGLKTRLESLDLSRALRASQLERHYVRTPAAAAPGSGARKYVK*
Ga0074479_101647052	3300005829	Sediment (Intertidal)	MVPFPGFVNLLVLREAEGYDARMQVLTAEQVEKVYAVTDALLLNRDWVVVPLVGSTDGVEMVLPDGKLLIRPVGGEGFRAWFTGLKERLELLDLDRALRASQLERHYVRTPSTAAPGSGARKYVK*
Ga0074479_108190443	3300005829	Sediment (Intertidal)	MLDIGVGEGIMRGMSVLTAEQVEKVYQLTDALLLNRDWVVVPLVGSPTGLETVLPDGKLLIRPVGGAGFPGWFQGLKERLELLDLDRALRASQLERHYVR
Ga0074479_111548753	3300005829	Sediment (Intertidal)	MGPEGYPFQEPEERSANCWRRGRDLGYHPRMSVLKEEQVEKVYQLTDSLLLNRDWVVVPLVGSPTGLETVLPDGKLLIRPVGGEGFSGWFGGLKERLEMLDLDRALRASQLERHYVRTPASAAPGSGARKYVK*
Ga0074470_116921049	3300005836	Sediment (Intertidal)	MDTVLTEAQVAKVYELTDGLQLNRDWVVVPLVGAAQGLEMLMPDGKILIRPVGGAFYDAWFAGLKTRLEALDLSRALRASQLERHYVRTPATAAPGSGARKYVK*
Ga0066652_1000711322	3300006046	Soil	MHVLSEAQVRKVYELTDALMLNPDWVVVPLVGAPQGMEMLMPDGKVLIRPAGGDAFDAWFSGLKTRLDLLDLSRALRASQLERHYVRTPATAAPGSGARKYVK*
Ga0075421_1019219062	3300006845	Populus Rhizosphere	MDVLSEAQVQMVYELTDGLLLNRDWVVVPLVGSPTGMEMLMPDGKILIRPPGGDRFDAWFADLKTRLESLDLSRALRASQLERHY
Ga0075425_1007683561	3300006854	Populus Rhizosphere	DLTDSLLLNRDWVVVPLVGSPRGIEMLMPDGKILIRPAGGDGFDAWFSGLKTRLESLDLSRALRASQLERHYVRTPAAAAPGSGARKYVK*
Ga0075434_1004283902	3300006871	Populus Rhizosphere	MDVLTEAQVAKVYELTDSLLLNRDWVVVPLVGSPQGMEMLMPDGKILIRPAGGDRFDSWFTDLKLRLESLDISRALRASQLERHYVRTPASAAPGSGARKYVK*
Ga0075434_1012437721	3300006871	Populus Rhizosphere	MDVLSEAQVRKVYELTDALLLNRDWVVVPLVGSPHGMEMLMPDGKILIRPAGGDRFDAWFADLKIRLESLDLSRALRASQLERHYVRTP
Ga0075424_1008491972	3300006904	Populus Rhizosphere	SLRRVGYHGTSMDVLTEAQVAKVYELTDSLLLNRDWVVVPLVGSPQGMEMLMPDGKILIRPAGGDRFDSWFTDLKLRLESLDISRALRASQLERHYVRTPASAAPGSGARKYVK*
Ga0075424_1028299741	3300006904	Populus Rhizosphere	MDVLTEAQVAKVYELTDGLLLNRDWVVVPLIGSPHGMEMLMPDGKVLIRPAGGDRFDAWFTDLKIRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK*
Ga0079219_108259731	3300006954	Agricultural Soil	ELTDGLLLNRDWVVVPLVGSVDGIEMLMPDGKILIRPAGASKFDGWFAGLKIRLESLDLSRALRASQLERHYVRTPAAAAPGSGARKYVK*
Ga0073932_11823972	3300007072	Hot Spring Sediment	MNVLTAEQVERVYRLTDSLDLHRDWVVVPLAAHPTGLEMTLPDGKILIRPPAGPDFEPWFAGLRERLGTLDLARALRAGQAERPCLRTPADALPAFGTRRYLRP*
Ga0075435_1020117742	3300007076	Populus Rhizosphere	MDVLSEAQVSKVYDLTDSLLLNRDWVVVPLVGSPRGIEMLMPDGKILIRPAGGDGFDAWFSGLKTRLESLDLSRALRASQLERHYVRTPAAAAPGSGARKYVK*
Ga0066710_1010133342	3300009012	Grasslands Soil	MSVLTAEQVEKVYQVTDGLHLNRDWVVVPLVGSPNGLETVLPDGKVLIRPVPGEGFSAWFAALQSRLEQLDLDRALRASQIERYYVRTPATAAPGSGARRYVR
Ga0111539_102516192	3300009094	Populus Rhizosphere	MEILTEAQVRKVYELTDSLLLHPDWVVVPLVGSAQGLEMLMPDGKILIRPAGGPGFEPWFADLKTRLELLDLSRALRAGQMERHYVRTPATAAPGSGARKYVK*
Ga0075418_105603131	3300009100	Populus Rhizosphere	DSLLLHPDWVVVPLVGSPRGVEMLMPDGKILIRPAGGAGFDAWFSGLKIRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVKP*
Ga0105091_100822842	3300009146	Freshwater Sediment	MEILTEAQVRKVYELTDSLLLNPDWVVVPLVGSTQGIEMLMPDGKVLIRPAGGPGFDPWFTDLKTRLESLDLSRALRASQMERHYVRTPATAAPGTGARKYVK*
Ga0114129_111763931	3300009147	Populus Rhizosphere	MEVLTEAQVRKVYELTDSLLLNPDWVVVPLVGSANGIEMLMPDGKVLIRPAGGPGFEPWFADLKIRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK*
Ga0075423_119861141	3300009162	Populus Rhizosphere	SLHLNPDWVVVPLVGSSRGLEMLMPDGKVLIRPAGGDGFDAWFVGLKTRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK*
Ga0136847_112114402	3300010391	Freshwater Sediment	MQVLTAEQVEKVYQLTDALLLNRDWVVVPLVGSDTGLEMVLPDGKLLIRPVGGEGFSGWFGGLKERLEQLDLDRALRASQLERHYVRTPASAAPGSGARKYVK*
Ga0134127_105797783	3300010399	Terrestrial Soil	MPLQHPTGADSSRERLLDSSAAGRYHGTSMDVLSEAQVAKVYELTDHLLLNRDWVVVPLVGSSHGMEMLMPDGKVLIRPAGGGRFDAWFADLKTRLESLDLSRALRASQVERHYVRTPSTAAPGSGA
Ga0134127_124419401	3300010399	Terrestrial Soil	MEILTEAQVRKVYELTDSLLLHPDWVVVPLVGSAQGLEMLMPDGKILIRPAGGPGFDPWFADLKTRLELLDLSRALRAGQMERHYVRTPATAAPGSGARKYVK*
Ga0134122_101500163	3300010400	Terrestrial Soil	MMSAMDAVLTEAQVQKVYELTDGLLLNRDWVVVPLIGCVDGLEMLMPDGKILIRPAGGARFDAWFGGLKTRLESLDISRALRASQLERHYVRTPATAAPGSGARKYVK*
Ga0134122_101982512	3300010400	Terrestrial Soil	MDVLSEAQVRKVYELTDSLLLNQDWVVVPLVGSPRGMEMLMPDGKILIRPVGGAAFEPWFAGLKTRLEALDLSRALRASQLERHYVRTPAAAAPGSGARKYVK*
Ga0134122_112328741	3300010400	Terrestrial Soil	MDTVLTEAQVAKVYELTDGLELNRDWVVVPLIGAPDGLEMLMPDGKILIRPAGGGRYDAWFVGLKTRLESLDLSRALRASQLERHYVRTPATAAPGSSARRYVK*
Ga0134121_127659191	3300010401	Terrestrial Soil	MDTVLTEAQVAKVYDLTDSLELNRDWVVVPLVGAPQGLEMLMPDGKILIRPVGGSRYDAWFAGLKIRLESLDLSRALRASQLERHYVRTPASAAPGSGARKYVK*
Ga0134123_105766872	3300010403	Terrestrial Soil	MDVLSEAQVAKVYELTDHLLLNRDWVVVPLVGSSQGMEMLMPDGKVLIRPAGGGRFDAWFADLKTRLESLDLSRALRASQVERHYVRTPATAAPGSGARKYVK*
Ga0134123_131768562	3300010403	Terrestrial Soil	RKMEMDGRSRYDREPMDVLTEAQVARVYELTDGLLLNRDWVVVPLVGSPHGMEMLMPDGKILIRPAGGGRYDAWFVGLKTRLESLDLSRALRASQLERHYVRTPASAAPGSGARKYVK*
Ga0137313_10637492	3300011403	Soil	MEILTEAQVRQVYELTDSLLLNPDWVVVPLVGSAQGIEMLMPDGKVLIRPAGGPGFDPWFTDLKMRLESLDLSRALRASQMERHYVRTPATAAPGSGARKYVK*
Ga0137426_10494182	3300011435	Soil	MDDILSADQVERVYRVTDGLLLNRDWVVVPLRGSELGLELIQPDGKLLVRPPAGPGFDLWCTGLKERLQALDLDRALRASQLERHYVRTPAAAPPGSGARKYTPWTK*
Ga0137429_11207612	3300011437	Soil	PSMEVLTEAQVRKVYELTDSLLLNPDWVVVPLVGSANGIEMLMPDGKVLIRPAGGPGFEPWFADLKIRLESLDLSRALRASQLERHYVRTPATSAPGSGARKYVK*
Ga0137465_10944872	3300012231	Soil	MEVLTEAQVRRVYELTDGLLLNRDWVVVPLVGAPQGMEMLMPDGKILIRPVGGNRFDSWFADLKTRLESLDLSRALRAGQLERHYVRTPAAAAPGSGARKYVK*
Ga0157299_101642611	3300012899	Soil	MDTVLTEAQVAKVYELTDGLELNRDWVVVPLIGAPDGLEMLIPDGKILIRPAGGGRYDAWFAGLKTRLESLDLSRALRASQLERHY
Ga0157298_101847562	3300012913	Soil	MEILTEAQVRRVYEITDSLLLNRDWVVVPLVGSANGIEMLMPDGKVLIRPAGGPAFDPWFSDLKTRLESLDLSRALRASQLERHY
Ga0137410_1000097019	3300012944	Vadose Zone Soil	MDSVLTEAQVHKVYELTDGLLLNRDWVVVPLIGSLDGLEMLMPDGKILIRPPGLAKFEPWFAGLKTRLESMDISRALRASQLERHYVRTPATAAPGSGARKYVK*
Ga0126369_135581681	3300012971	Tropical Forest Soil	MDVLTEAQVAKVYELTDGLLLNRDWVVVPLVGSPRGMEMLMPDGKVLIRPAGGDRFDAWFADLKTRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYV
Ga0167647_10683442	3300015199	Glacier Forefield Soil	MDTLLTEAQVAKVYDLTDGLELNRDWVVVPLVAAAQGLEMLMPDGKILIRPVGGARYDAWFAGLKTRLESLDLSRALRASQLERHYVRTPASAAPGSGARKYVK*
Ga0187778_100477923	3300017961	Tropical Peatland	MKVLTAEQVARVYDLTDALLLNRDWVVVPLVGSDSGLEMVLPDGKILIRPAGGEAFAGWFGGLKERLEMLNLDRALRASQLERHYVRTPASAAPGSGARKYVKP
Ga0190266_104658352	3300017965	Soil	MDPVLTEAQVSKVYELTDGLLLNRDWVVVPLVGSIDGLEMLMPDGKILIRPAGGSTFAGWFVGLKTRLESMDISRALRASQLERHYVRTPATAAPGSGARKYYDK
Ga0190266_110299901	3300017965	Soil	MDSVLTEAQVSKVYELTDGLLLNRDWVVVPLVASLDGMEMLMPDGKILIRPAGGSTFDGWFAGLKVRLESLDLSRALRASQLERH
Ga0066662_119293632	3300018468	Grasslands Soil	MSVLTAEQVEKVYQVTDGLHLNRDWVVVPLVGSPNGLETVLPDGKVLIRPVPGEGFSAWFAGLQNRLEQLDLDRALRASQLERHYVRTPATAAPGSGA
Ga0187894_102630952	3300019360	Microbial Mat On Rocks	MDVLTEAQVRKVYELTDGLLLNPDWVVVPLVGSPQGMEMLMPDGKILIRPAGGDRFDAWFADLKTRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVKEL
Ga0187892_100124064	3300019458	Bio-Ooze	MDVLTAGQVDRVYALTDSLELNRDWVVVPLGAHETGIEMTLPDGKILIRPPAGDAFDAWFAGLRRRLEGLDLERALRASHLERHVLRTPAEAAPGSGARRYVNPPK
Ga0187893_1000472412	3300019487	Microbial Mat On Rocks	MDDVLSAEQVERVYRLTDSLLLNRDWVVVPLRSSGAGLEMAMPDGKILVRPPAGPAFEPWFAGLRSRLEALDLDRALRASQLERHYPHVSARAAPGSGARRYVPPPPHPNHPG
Ga0179590_10734051	3300020140	Vadose Zone Soil	GLLLNRDWVVVPLVGSVDGLEMLMPDGKILIRPAGASKFDGWFVGLKVRLESLDLSRALRASQLERHYVRTPAAAAPGSGARKYVK
Ga0196964_100441892	3300020202	Soil	MHDVLTADQIEKVYRITDGLLLNRDWVVVPLRGHVQGLELTMPDGKILIRPAYGAAFDAWYQNLRERLEALDLDRALRASQLERHYARTPAGSAPGTGARKYVPWAQPPFPTPPPKAASTASPT
Ga0213876_101311963	3300021384	Plant Roots	MPAMDLVLTEAQVARVYELTDGLLINRDWVVVPLVGSPEGMEMLMPDGKILIRPAGGSNFDAWFVGLKNRLEALDISRALRASQLERHYVRTPAAAAPGSGARKYYGK
Ga0210384_101559692	3300021432	Soil	MRGMQVLTAEQVEKVYQVTDALLLNRDWVVVPLVGSDTGLEVVLPDGKLLIRPAGGEGFGGWFAGLKERLGMLDLDRALRASQLERHYVRTPASAAPGSGARKYVK
Ga0247664_11730872	3300024232	Soil	MNVLSEAQVRKVYELTSSLLLNPDWVVVPLVGSPQGMEMLMPDGKVLIRPAGGDGFEAWFSGLKTRLESLDLSRALRASQLERHYVRTPATAAPGTGARKYVK
Ga0247677_10759141	3300024245	Soil	AMDAVLTEAQVQKVYELTDSLLLNRDWVVVPLIGSIDGMEMLMPDGKILIRPAGGSRFDPWFGGLKTRLESLDISRALRASQLERHYVRTPASAAPGSGARKYVK
Ga0247671_10343042	3300024284	Soil	MVAMDVLSEAQVKKVYELSDALLLNRDWVVVPLVGSPQGMEMLMPDGKILIRPPGGDRFDPWFADLRTRLEALDLSRALRASQLERHYVRTPASAAPGSGARKYVK
Ga0179589_100894952	3300024288	Vadose Zone Soil	MDAVLSEAQVSKVYELTDGLLLNRDWVVVPLVGSVDGLEMLMPDGKILIRPAGASKFDGWFVGLKVRLESLDLSRALRASQLERHYVRTPAAAAPGSGARKYVK
Ga0209640_100946003	3300025324	Soil	VSPPAPPGGRWDEDFGLRTEDWGLWTVDPAGSIMPLMSVLTAEQVEKVYVLTDSLLLNRDWVVVPLVGSPTGLETVLPDGKLLIRPVGGEGFAGWFQGLKERLEMLDLDRALRASQLERHYVRTPSTAPPGSGARKYVK
Ga0207670_112594132	3300025936	Switchgrass Rhizosphere	VLTEAQVAKVYELTDGLLLNRDWVVVPLVGSAHGMEMLMPDGKILIRPAGGDQFDAWFTDLKIRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0209166_102001042	3300027857	Surface Soil	MDSVLSEAQVAKIYHLTDSLLLNRDWIVVPLVGSAEGMELLMPDGKVLIRPAGGLKFDAWFSGLKNRLESLDLSRALRASQLERHYVRTPATAAPGSGARRYTK
Ga0209579_100013392	3300027869	Surface Soil	MDTLLTESQVSKVYELTDALLLNRDWVVVPLVGSPDGMEMLMPDGKILIRPAGGPKFDAWFSGLKTRLEALDISRALRASQLERHYVRTPAAAAPGSGARRYVK
Ga0207428_101717412	3300027907	Populus Rhizosphere	MEILTEAQVRKVYELTDSLLLHPDWVVVPLVGSAQGLEMLMPDGKILIRPAGGPGFEPWFADLKTRLELLDLSRALRAGQMERHYVRTPATAAPGSGARKYVK
Ga0209382_117276782	3300027909	Populus Rhizosphere	MDVLSEAQVQMVYELTDGLLLNRDWVVVPLVGSPTGMEMLMPDGKILIRPPGGDRFDAWFADLKTRLESLDLSRALRASQLERHYVRTPASAAPGSGARKYVK
Ga0310888_110243141	3300031538	Soil	MEILTEAQVRKVYELTDSLLLNPDWVVVPLVGSTQGLEMLMPDGKVLIRPAGGPGFDPWFADLKTRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0247727_104883472	3300031576	Biofilm	RGGTLTEDRGLWTEDPAGDIMPPMSVLTAEQVEKVYQLTDSLLLNRDWVVVPLVGSPTGLEMVLPDGKLLIRPVGGEGFAGWFQGLKERLESLELDRALRASELERHYVRTPAAAPPGSGARKYVK
Ga0310813_100031408	3300031716	Soil	MNILSESQVRKVYELTGSLLLNPDWVVVPLVGTPQGMEMLMPDGKVLIRPASGDAFDAWFSGLKTRLEALDLSRALRASQIERHYVRTPATAAPGSGARKYVK
Ga0310813_100070068	3300031716	Soil	MDVLTEAQVAKVYELTDGLLLNRDWVVVPLIGSPHGMEMLMPDGKVLIRPAGGDRFDAWFTDLKIRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0310813_100369346	3300031716	Soil	MDVLTEAQVAKIYELTDGLLLNRDWVVVPLVGSAHGMEMLMPDGKILIRPAGGDRFDAWFTDLKIRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0310813_101150513	3300031716	Soil	MDVLSESQVRRVYELTDSLLINPDWVVVPLVGSPRGIEMLMPDGKILIRPAGGDGFDAWFSGLKTRLESLDLSRALRASQLERHYVRTPAAAAPGSGARKYVQ
Ga0310813_102563791	3300031716	Soil	LTDGLLLNRDWVVVPLVGSPHGMEMLMPDGKILIRPAGGDRFDAWFADLKIRLESLDLSRALRASQLERHYVRTPASAAPGSGARKYVK
Ga0310813_104194081	3300031716	Soil	VRKIYELTDSLLLNRDWVVVPLVGSANGIEMLMPDGKVLIRPAGGPAFDPWFSDLKMRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0307474_101088733	3300031718	Hardwood Forest Soil	MVDSQESAGYDAGRMDIVLTEAQVSKVYELTDGLLLNRDWVVVPLVGSSDGMEMLMPDGKILIRPAGNAKFDGWFSGLKSRLESMDISRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0307468_1014267712	3300031740	Hardwood Forest Soil	MIVLTEAQVQKVYELTDGLLLNRDWVVVPLVGSTHGMEMLMPDGKVLIRPAGGDRFDSWFADLKVRLESLDLSRALRASQLERHYVRTPAAAAPGSGARRYVK
Ga0307475_107193402	3300031754	Hardwood Forest Soil	PGSSRYDVRAMDAVLTEAQVAKVYDLTDSLLLNRDWVVVPLVGAPGGMEMLMPDGKILIRPPGGTKFDGWFSGLKARLDALDLSRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0318554_106735231	3300031765	Soil	FQAARAPLGPRPILEIGAPPRYDGRPMTILSEAQVRKVYELTGSLLLNPDWVVVPLVGSPQGTEMLMPDGKILIRPAGGDAFDAWFAGLRTRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVN
Ga0318509_103829481	3300031768	Soil	SLLLNRDWVVVPLVGSSEGLEMLMPDGKILIRPAGGLRFDAWFSGLKGRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0318552_104947771	3300031782	Soil	MDLVLTESQVRKVYELTDGLLLNRDWVVVPLVGSPQGVEMLMPDGKVLIRPAGGDRFDSWFADLGTRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVQ
Ga0306921_125528821	3300031912	Soil	QVRKVYELTDGLLLNRDWVVVPLVGSPQGVEMLMPDGKVLIRPAGGDRFDSWFADLGTRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVQ
Ga0310884_109944692	3300031944	Soil	MDDILSAERVERIYQVTDGLKLNRDWVVVPLRGSEHGIAMVLPDGKLLIRPPGGPAFDSWFSGLKERLEILDLDRALRASQLERHYVRTPAAAPPGSGARKYTPWSR
Ga0307479_101217212	3300031962	Hardwood Forest Soil	MDAVLTEAQVAKVYDLTDSLLLNRDWVVVPLVGAPGGMEMLMPDGKILIRPPGGTKFDGWFSGLKARLDALDLSRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0318559_105309761	3300032039	Soil	MDSVLSEAQVAKVYELTDSLLLNRDWVVVPLVGSAYGVEMLMPDGKVLVRPAGGEAFDAWFSGLKTRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0318553_105350032	3300032068	Soil	SVLSEAQVAKVYELTDSLLLNRDWVVVPLVGSAYGVEMLMPDGKVLVRPAGGEAFDAWFSGLKTRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0310890_107807342	3300032075	Soil	MEILTEAQVRKVYELTDSLLLHPDWVVVPLVGSAQGLEMLMPDGKVLIRPAGGPGFDPWFADLKTRLELLDLSRALRAGQMERHYVRTPATAAPGSGARKYVK
Ga0310896_105633682	3300032211	Soil	MEILTEAQVRRVYEITDSLLLNRDWVVVPLVGSANGIEMLMPDGKVLIRPAGGPAFDPWFSDLKMRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0310812_102275132	3300032421	Soil	AKIYELTDGLLLNRDWVVVPLVGSAHGMEMLMPDGKILIRPAGGDRFDAWFTDLKIRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0310812_103489741	3300032421	Soil	AQVARVYELTDGLLLNRDWVVVPLVGSPHGMEMLMPDGKILIRPAGGDRFDAWFADLKIRLESLDLSRALRASQLERHYVRTPASAAPGSGARKYVK
Ga0310810_101897312	3300033412	Soil	MDGRSRYDREPMDVLTEAQVARVYELTDGLLLNRDWVVVPLVGSPHGMEMLMPDGKILIRPAGGDRFDAWFADLKIRLESLDLSRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0314864_0042080_423_737	3300033805	Peatland	MDTVLTEAQVAKVYELTDSLLLNRDWVVVPLVGSPDGMEMLMPDGKILIRPAGGGKFDPWFSGLKTRLESLDISRALRASQLERHYVRTPATAAPGSGARKYVK
Ga0372943_0798502_257_577	3300034268	Soil	MDIVLTESQVAKIYDLTDSLLLNRDWVVVPLIGSPDGLEMLMPDGKILIRPAGAGRYDAWFAGLKARLESLDLSRALRASQLERHYVRTPASAAPGSGARKYVKER

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098843

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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