Metagenome / Metatranscriptome Family F098845

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098845
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	52 residues
Representative Sequence	MAQAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF
Number of Associated Samples	72
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	59.22 %
% of genes from short scaffolds (< 2000 bps)	91.26 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.107 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (23.301 % of family members)
Environment Ontology (ENVO)	Unclassified (44.660 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.049 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 69.09% β-sheet: 0.00% Coil/Unstructured: 30.91%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF02518	HATPase_c	22.33
PF00313	CSD	1.94
PF13683	rve_3	1.94
PF13531	SBP_bac_11	0.97
PF13191	AAA_16	0.97
PF00486	Trans_reg_C	0.97
PF00004	AAA	0.97
PF00873	ACR_tran	0.97
PF13458	Peripla_BP_6	0.97
PF03631	Virul_fac_BrkB	0.97
PF12669	FeoB_associated	0.97
PF04075	F420H2_quin_red	0.97
PF05869	Dam	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.11 %
Unclassified	root	N/A	36.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.11 %
Unclassified	root	N/A	36.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.11 %
Unclassified	root	N/A	36.89 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.34 %
Unclassified	root	N/A	36.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	50.49 %
Unclassified	root	N/A	36.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.89 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	20.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.83 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.97 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.97 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.68 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	9.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.94 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.97 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.97 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.68 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	9.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.94 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.97 %
Roseovarius	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius	0.97 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.68 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	9.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.94 %
Roseovarius litoreus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → Roseovarius litoreus	0.97 %
Roseomonas oryzicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas oryzicola	0.97 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17295313	All Organisms → cellular organisms → Bacteria → Proteobacteria	3302	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1048552	Not Available	761	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1036531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300000956\|JGI10216J12902_102552266	Not Available	1057	Open in IMG/M
3300000956\|JGI10216J12902_113963463	Not Available	751	Open in IMG/M
3300004479\|Ga0062595_101187761	Not Available	676	Open in IMG/M
3300005163\|Ga0066823_10055667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	726	Open in IMG/M
3300005177\|Ga0066690_10440018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	883	Open in IMG/M
3300005332\|Ga0066388_100503269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1847	Open in IMG/M
3300005332\|Ga0066388_101086072	Not Available	1353	Open in IMG/M
3300005332\|Ga0066388_102031935	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300005332\|Ga0066388_103097492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	850	Open in IMG/M
3300005332\|Ga0066388_103299902	Not Available	824	Open in IMG/M
3300005363\|Ga0008090_10130685	Not Available	513	Open in IMG/M
3300005363\|Ga0008090_10136903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300005435\|Ga0070714_100108567	All Organisms → cellular organisms → Bacteria	2454	Open in IMG/M
3300005445\|Ga0070708_100549499	All Organisms → cellular organisms → Bacteria → Proteobacteria	1089	Open in IMG/M
3300005518\|Ga0070699_100002110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18028	Open in IMG/M
3300005518\|Ga0070699_100062087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3238	Open in IMG/M
3300005713\|Ga0066905_100882647	Not Available	781	Open in IMG/M
3300005713\|Ga0066905_101285908	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300005713\|Ga0066905_101385654	Not Available	636	Open in IMG/M
3300005713\|Ga0066905_101676771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300005764\|Ga0066903_103730067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	819	Open in IMG/M
3300005764\|Ga0066903_106305320	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005764\|Ga0066903_108526674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	522	Open in IMG/M
3300005764\|Ga0066903_109148849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300006845\|Ga0075421_101691562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300006854\|Ga0075425_102100001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300006904\|Ga0075424_100717337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1067	Open in IMG/M
3300006938\|Ga0081245_1506779	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300007076\|Ga0075435_101441786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300009147\|Ga0114129_12370912	Not Available	636	Open in IMG/M
3300009792\|Ga0126374_10902233	Not Available	685	Open in IMG/M
3300009792\|Ga0126374_10995953	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300009792\|Ga0126374_11504953	Not Available	552	Open in IMG/M
3300010043\|Ga0126380_11563362	Not Available	587	Open in IMG/M
3300010046\|Ga0126384_10294496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1332	Open in IMG/M
3300010046\|Ga0126384_11341442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300010046\|Ga0126384_12254623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300010358\|Ga0126370_10712250	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300010358\|Ga0126370_11824071	Not Available	589	Open in IMG/M
3300010358\|Ga0126370_12467512	Not Available	517	Open in IMG/M
3300010359\|Ga0126376_12930265	Not Available	527	Open in IMG/M
3300010360\|Ga0126372_11176957	Not Available	790	Open in IMG/M
3300010360\|Ga0126372_11526252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300010360\|Ga0126372_12522719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300010361\|Ga0126378_11257083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	837	Open in IMG/M
3300010362\|Ga0126377_10611700	Not Available	1135	Open in IMG/M
3300010362\|Ga0126377_13533160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	505	Open in IMG/M
3300010366\|Ga0126379_13228800	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300010366\|Ga0126379_13750397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300010376\|Ga0126381_103526691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300010376\|Ga0126381_104203901	Not Available	558	Open in IMG/M
3300010396\|Ga0134126_10980638	Not Available	947	Open in IMG/M
3300012923\|Ga0137359_10083657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2803	Open in IMG/M
3300012948\|Ga0126375_11525301	Not Available	572	Open in IMG/M
3300012971\|Ga0126369_12237445	Not Available	634	Open in IMG/M
3300012989\|Ga0164305_10558531	Not Available	912	Open in IMG/M
3300016270\|Ga0182036_11262050	Not Available	616	Open in IMG/M
3300016294\|Ga0182041_11734899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300016341\|Ga0182035_10475922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas oryzicola	1063	Open in IMG/M
3300016371\|Ga0182034_10431058	Not Available	1088	Open in IMG/M
3300018482\|Ga0066669_11708022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	578	Open in IMG/M
3300021560\|Ga0126371_10339110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1636	Open in IMG/M
3300025905\|Ga0207685_10727377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300027071\|Ga0209214_1002247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1874	Open in IMG/M
3300027502\|Ga0209622_1023517	Not Available	1084	Open in IMG/M
3300027909\|Ga0209382_11653993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300031543\|Ga0318516_10547445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300031549\|Ga0318571_10139310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	829	Open in IMG/M
3300031549\|Ga0318571_10239346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300031561\|Ga0318528_10254298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	942	Open in IMG/M
3300031573\|Ga0310915_10679207	Not Available	727	Open in IMG/M
3300031573\|Ga0310915_10935370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300031679\|Ga0318561_10567434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	625	Open in IMG/M
3300031719\|Ga0306917_11381603	Not Available	543	Open in IMG/M
3300031736\|Ga0318501_10069831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1693	Open in IMG/M
3300031747\|Ga0318502_10576904	Not Available	676	Open in IMG/M
3300031764\|Ga0318535_10437216	Not Available	583	Open in IMG/M
3300031771\|Ga0318546_10665553	Not Available	732	Open in IMG/M
3300031794\|Ga0318503_10240452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300031833\|Ga0310917_10695693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	688	Open in IMG/M
3300031845\|Ga0318511_10528094	Not Available	547	Open in IMG/M
3300031860\|Ga0318495_10503428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300031880\|Ga0318544_10235980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	707	Open in IMG/M
3300031890\|Ga0306925_10089020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3275	Open in IMG/M
3300031890\|Ga0306925_10101007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3070	Open in IMG/M
3300031890\|Ga0306925_11573350	Not Available	640	Open in IMG/M
3300031890\|Ga0306925_11635953	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300031894\|Ga0318522_10312460	Not Available	595	Open in IMG/M
3300031942\|Ga0310916_10046306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3301	Open in IMG/M
3300031946\|Ga0310910_10743257	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300031954\|Ga0306926_10524674	Not Available	1453	Open in IMG/M
3300031954\|Ga0306926_11632302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300032001\|Ga0306922_11045048	Not Available	840	Open in IMG/M
3300032025\|Ga0318507_10514975	Not Available	520	Open in IMG/M
3300032041\|Ga0318549_10481866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300032091\|Ga0318577_10201718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	951	Open in IMG/M
3300032205\|Ga0307472_101588883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → Roseovarius litoreus	642	Open in IMG/M
3300032261\|Ga0306920_101905791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	835	Open in IMG/M
3300033289\|Ga0310914_11200141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.17%
Host-Associated	Host-Associated	5.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.17%
Plants	Host-Associated → Plants	5.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.79%
Loam	Environmental → Terrestrial → Soil → Loam	20.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.85%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	23.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006938	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A001 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01790690	2088090014	Soil	MARAPDSLGFRFAVVLTLAAIILAITTWAFPHNVASAVSDTTNPIYRAQHVNLF
AF_2010_repII_A100DRAFT_10485521	3300000655	Forest Soil	EQMAQAPDSLGFRFAVVLALAVIIVAITTWAANQERASAGSTPPSEVIYRAQHLNLF*
AP72_2010_repI_A100DRAFT_10365311	3300000837	Forest Soil	MAQPPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNL
JGI10216J12902_1025522662	3300000956	Soil	MAREPDSLGFRFAVVLALAAIVVAITTWRSQVKRASAGPPSEMIYRTQHLNVF*
JGI10216J12902_1139634631	3300000956	Soil	QLVKEAAHEGEDMAQEPDSLGFRFAVVLALAAVVVAIATWAFPNKVAAVSVTTDPIYRAQNVNLF*
Ga0062595_1011877611	3300004479	Soil	MARAPDSLGFRFAVVLTLAAIILAITTWAFPHNVASAVSDTTNPIYRAQHVNLF*
Ga0066823_100556672	3300005163	Soil	MAPEPDSLAFRFAMVLALAVIIVTITTWASYHERASAESTPPSAVIYRAQYLNLY*
Ga0066690_104400182	3300005177	Soil	MAPEPDSLAFRFAMVLALAVIIVTITTWASYHEHASAESTPPSAVIYRAQYLNLY*
Ga0066388_1005032694	3300005332	Tropical Forest Soil	MAREPDNLGFRFAVVLALAVIIVAVTTWAFPEKVASAVSVPTDAIYRAQHVNLF*
Ga0066388_1010860723	3300005332	Tropical Forest Soil	MAREPDSLAFRFAVVLALTVIIVAITTWASHHKLASAVPVPTDPIYRAQHLNLF*
Ga0066388_1020319351	3300005332	Tropical Forest Soil	QAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF*
Ga0066388_1030974924	3300005332	Tropical Forest Soil	QMAQEPDSLGFRFAVVLALTVIIVAITTWASHHKPASAGPTPTGAIYRAQHLNLF*
Ga0066388_1032999022	3300005332	Tropical Forest Soil	MAREPDSLGFRFAVVLALAVIIVAITTWAFPLKLTSAVSNPTDPVYRAQHLNLF*
Ga0008090_101306852	3300005363	Tropical Rainforest Soil	SLGFRFAVVLALAVIIVAITTWAANHERASAGPTPPSEVIYRAQHLNLF*
Ga0008090_101369031	3300005363	Tropical Rainforest Soil	MAQAPDSVGFRFAVVLALAAIIVAIMTWAANHERASAGSTPPSEVIYRAQHLNLF*
Ga0070714_1001085675	3300005435	Agricultural Soil	MARAPDSLGFRFAVVLALAVIIVAITTWAANHERVSAGSTPPSEVIYRAQHLNLF*
Ga0070708_1005494992	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAQAPDSLGLRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF*
Ga0070699_1000021103	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VALKPVRLVVVLALVAAIIGAITTWAFHQKRASASPPSEVIYRAQHLNLF*
Ga0070699_1000620871	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MARAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF*
Ga0066905_1000845204	3300005713	Tropical Forest Soil	MAPKPDNLSFRLVGVLALVAVTIVAITMWQSHLKHASAGPPSEVIYR
Ga0066905_1008826472	3300005713	Tropical Forest Soil	MAQERDSLGFRFAVVVALAVIIVAITTWAADHERASAGSIPPSEVIYRAPHLNLF*
Ga0066905_1012859082	3300005713	Tropical Forest Soil	MAQAPDSLGFRFAVVLALAVIIVAITTWAANQERASAGSTPPSEVIYRAQHLNLF*
Ga0066905_1013856542	3300005713	Tropical Forest Soil	MAREPDTLGFRFAVVLALAVIIIAITTWAFPDKVASAVSVPTDAIYRAQHVNLF*
Ga0066905_1016767712	3300005713	Tropical Forest Soil	MAQAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRA
Ga0066903_1037300671	3300005764	Tropical Forest Soil	MAQEPDSLGFRFAVVLALTVIIVAITTWASHHKPASAV
Ga0066903_1063053201	3300005764	Tropical Forest Soil	MAQAPDNLGFRFAVVLALAVIIVAITTWAANQERASAGSPPPSQVIYRAQHLNLF*
Ga0066903_1085266741	3300005764	Tropical Forest Soil	VCCHEGEQMAQAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF*
Ga0066903_1091488492	3300005764	Tropical Forest Soil	MAPAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPP
Ga0075421_1016915621	3300006845	Populus Rhizosphere	GEQMAQERDSLGFRFAVVVALAVIIVATTTWVADHERASAGSIPPSEVIYRAQHLNLF*
Ga0075425_1021000012	3300006854	Populus Rhizosphere	MAQAPDSLGLRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVITGLNI*
Ga0075424_1007173371	3300006904	Populus Rhizosphere	MAPEPDSLAFRFAMVVALAVIIVTITTWASYHEHASAESTPPSAVIY
Ga0081245_15067792	3300006938	Tropical Rainforest Soil	MAQTPDSLGFRFAVVLALAVIIVAITTWAANQERASAGSTPPSEVIYRAQHLNLF*
Ga0075435_1014417862	3300007076	Populus Rhizosphere	MAQAPDSLGLRFAVVLALAVIIVAITTWAANHERASAGSPPSEVIY
Ga0114129_123709121	3300009147	Populus Rhizosphere	AFRFAMVLALAVIIVTITTWASYHEHASAESTPPSAVIYRAQYLNLY*
Ga0126374_109022331	3300009792	Tropical Forest Soil	MAREPDTLGFRFAVVLALAVIIVAVTTWAFPEKVASAVSVPTDAIYRAQHVNLF*
Ga0126374_109959531	3300009792	Tropical Forest Soil	FRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF*
Ga0126374_115049531	3300009792	Tropical Forest Soil	MAPDSLGFRFAVVLVLAVIIVAITTWAAYHERASAGSTPPSEVIYRAQHLN
Ga0126380_115633622	3300010043	Tropical Forest Soil	MAREPDSLGFRFAVVLALAVIIVTIITWAFPLKLTSAVSNPTDPVYRAQHLNL
Ga0126384_102944963	3300010046	Tropical Forest Soil	MAQEPDSLGFRFAVVLALTVIILAITTWASHHKPASAVPTPTDAIYRAQHLNLF*
Ga0126384_113414421	3300010046	Tropical Forest Soil	LGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF*
Ga0126384_122546231	3300010046	Tropical Forest Soil	MAQPPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF*
Ga0126370_107122501	3300010358	Tropical Forest Soil	MAQAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPP
Ga0126370_118240712	3300010358	Tropical Forest Soil	VCCHEGERMAPDSLGFRFAVVLALAVIIVAITTWAAYHERASAGSTPPSEVIYRAQHLNLF*
Ga0126370_124675122	3300010358	Tropical Forest Soil	MAREPDTLGFRFAVVLALAVIIIAITTWAFPDKVASAVSVPTDAIYR
Ga0126376_129302652	3300010359	Tropical Forest Soil	MAQEPDSLGFRFAVVLALTVIIVAITTWASHHKPASAVPTPTDAIYRAQHLNLF*
Ga0126372_111769572	3300010360	Tropical Forest Soil	MAREPDTLGFRFAVVLALAVIIITITTWAFPDKVASAVSVPTDAIYRAQHVNLF*
Ga0126372_115262522	3300010360	Tropical Forest Soil	MAQAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF*
Ga0126372_125227191	3300010360	Tropical Forest Soil	MAPEPDSLAFRFAMVLASAVIIVTITTWASYHERASAGSTPPSAVIYRAQYLNLY*
Ga0126378_112570831	3300010361	Tropical Forest Soil	MAQAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNL
Ga0126377_106117001	3300010362	Tropical Forest Soil	DSLGFRFAVVLVLAVIIVAITTWAAHHERASAGSTPPSEVIYRAQHLNLF*
Ga0126377_135331601	3300010362	Tropical Forest Soil	SVRCHEGNKMAQELDSLGFRFAVVLVLTVIVVAITTLASHHKPASAVPTPTDAIYRAQHLNLF*
Ga0126379_132288001	3300010366	Tropical Forest Soil	HEGEQMAQAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF
Ga0126379_137503972	3300010366	Tropical Forest Soil	MAPAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPS
Ga0126381_1035266911	3300010376	Tropical Forest Soil	MAPAPDSLGFRFAVVLALAVIIVAITTWAANHERASAG
Ga0126381_1042039011	3300010376	Tropical Forest Soil	REQMDSLGFRFAVVLALAVIIVAITTWAANQERASAGSSPPSEVIYRAQHLNLF*
Ga0134126_109806381	3300010396	Terrestrial Soil	MARAPDSLGFRFAVVLTLAAIILAITTWAFPHNVASA
Ga0137359_100836572	3300012923	Vadose Zone Soil	MAPEPDSLAFRFAMVLALAVIIVTITTWASYHESASAGSTPPSAVIYRAQYLNLY*
Ga0126375_115253011	3300012948	Tropical Forest Soil	MARAPASLGFRFAVVLALAVIIVAITWQSHLKRASADPPSGVIYRAQHLNLF*
Ga0126369_122374451	3300012971	Tropical Forest Soil	MAPKPHSLAFKFALVLALVAIFVAITMWQSTHKNASAGPPSDAIYRAQHLNLF*
Ga0164305_105585311	3300012989	Soil	MARAPDSLGFRFAVVLALAVIIVAITTWAANHERVSAGSTPTSGVIYRAQHSILY
Ga0182036_112620502	3300016270	Soil	GEQMAQTPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSSPPSEVIYRAQHLNLF
Ga0182041_117348991	3300016294	Soil	MAQVPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSE
Ga0182035_104759221	3300016341	Soil	MAREPDSLGFRFALVLALAVIIVAITTWASHHKLASAVPVPTDHPIYRAQHL
Ga0182034_104310581	3300016371	Soil	VCCHKGEQMASDSLGFRFAVVLVLAVIIVAITTWAAYHERASAGSPPSEVIYRAQHLNLF
Ga0066669_117080221	3300018482	Grasslands Soil	MAPEPDSLAFRLAMVLALAVIIVTITTWASYHEHASAESTPPRA
Ga0126371_103391102	3300021560	Tropical Forest Soil	MDSLGFRFAVVLALAVIIVAITTWAANQERASAGSSPPSEVIYRAQHLNLF
Ga0207685_107273772	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MAQAPDSLGFRFAVVLALALIIVAITTWAANQERASAGSTPPSEVIYRAQHLNLF
Ga0209214_10022472	3300027071	Forest Soil	MARAPDSLGFRFAVVLALAVIIVAITTWAANHESASAGSTPPSGVIYRAQHLILY
Ga0209622_10235172	3300027502	Forest Soil	MARAPDTLGFRFAVVLALAVIIVAITTWAANHESASAGSTPPSGVIYRAQHLILY
Ga0209382_116539931	3300027909	Populus Rhizosphere	PLPRGEQMAQERDSLGFRFAVVVALAVIIVATTTWVADHERASAGSIPPSEVIYRAQHLNLF
Ga0318516_105474452	3300031543	Soil	MAQAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF
Ga0318571_101393101	3300031549	Soil	LGFRFAVVLALAMIIVAITTWAANQERASAGSTPPSEVIYRAQHLNLF
Ga0318571_102393462	3300031549	Soil	MAQAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLN
Ga0318528_102542983	3300031561	Soil	PISVCCHEGEQMAQAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF
Ga0310915_106792072	3300031573	Soil	MAQTPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSSPPSEVIYRAQHLNLF
Ga0310915_109353701	3300031573	Soil	MAQVPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVI
Ga0318561_105674342	3300031679	Soil	MAPEPDSLAFRFAMILALAVIIVTITTWASYHERASAGSTPPSAVIY
Ga0306917_113816033	3300031719	Soil	CHEGEQTAQAPDSLGFRFAVVLALAVIIVAITTWAANLERASAGSTPPSEVIYRAQHLNL
Ga0318501_100698311	3300031736	Soil	MAQERDSLGFRFAVVVALAVIIVAITTWAADHERASAGSIPPSEVIYRAPHGPVVE
Ga0318502_105769042	3300031747	Soil	EGEQMAQAPDSLGFRFAVVLALAVIIVAITTWAANQERASAGSTPPSEVIYRAQHLNLF
Ga0318535_104372161	3300031764	Soil	MAQERDSLGFRFAVVVALAVIIVAITTWAADHERASAGSI
Ga0318546_106655531	3300031771	Soil	HEGEQMAQAPDSLGFRFAVVLALAVIIVAITTWAANQERASAGSTPPSEVIYRAQHLNLF
Ga0318503_102404522	3300031794	Soil	GEQMAQERDSLGFRFAVVVALAVIIVAITTWAADHERASAGSIPPSEVIYRAPHLNLF
Ga0310917_106956932	3300031833	Soil	MAQVPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTP
Ga0318511_105280942	3300031845	Soil	GEQMASDSLGFRFAVVLVLAVIIVAITTWAAYHERASAGSPPSEVIYRAQHLNLF
Ga0318495_105034281	3300031860	Soil	MAQAPDSLGFRFAVVLALAVIIVAITTWAANQERASAGSTPPSEV
Ga0318544_102359801	3300031880	Soil	MAPEPDSLAFRFAMILALAVIIVTITTWASYHERASAGSTPPSAVI
Ga0306925_100890202	3300031890	Soil	MAPEPDSLAFRFAMILALAVIIVTITTWASYHERASAGSTPPSAVIYRAQYLNLY
Ga0306925_101010072	3300031890	Soil	MAQERDSLGFRFAVVVALAVIIVAITTWAADHERASAGSIPPSEVIYRAPHLNLF
Ga0306925_115733501	3300031890	Soil	MAPEPDSLAFRFAMVLALAVIVVTITTWASYHEHASAESTPPSAVIYRAQYLSLY
Ga0306925_116359532	3300031890	Soil	MAQVPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF
Ga0318522_103124602	3300031894	Soil	QMAQAPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF
Ga0310916_100463067	3300031942	Soil	MAQAPDSLGFRFAVVLALAVIIVAITTWAANQERASAGSTPPSEVIYRAQHLNLF
Ga0310910_107432571	3300031946	Soil	GFRFAVVVALAVIIVAITTWAADHERASAGSIPPSEVIYRAQHLNLF
Ga0306926_105246744	3300031954	Soil	EQMAQVPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSTPPSEVIYRAQHLNLF
Ga0306926_116323022	3300031954	Soil	MAQVPDSLGFRFAVVLALAVIIVAITTWAANHERASAGS
Ga0306922_110450481	3300032001	Soil	FRPLKVRLSISVLPQGEKMAREPDSLGFRFALVLALAVIIVAITTWASHHKLASAVPVPTDHPIYRAQHLNLF
Ga0318507_105149751	3300032025	Soil	MAQERDSLGFRFAVVVALAVIIVAITTWAADHERA
Ga0318549_104818662	3300032041	Soil	MAQTPDSLGFRFAVVLALAVIIVAITTWAANHERASAGSSPPSEVIYRAQH
Ga0318577_102017182	3300032091	Soil	MAPEPDSLAFRFAMILALAVIIVTITTWASYHERASAGST
Ga0307472_1015888832	3300032205	Hardwood Forest Soil	MARAPDSLGFRFAVVLALAVIIVSITTWAANHERASAGSTPPSGVIYRAQHLNLF
Ga0306920_1019057912	3300032261	Soil	MAQAPDSLGFRFAVVLALAVIIAAITTWAANHERASAGSTPPSEVIYRAQHLNLF
Ga0310914_112001411	3300033289	Soil	GEQMAQERDSLGFRFAVVVALAVIIVATTTWAADHERASAGSIPPSEVIYRAQHLNLF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098845

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences