NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F098865

Metagenome / Metatranscriptome Family F098865

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098865
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 104 residues
Representative Sequence MYPGDARSKWPSALLTDRRVAHYWDEQRALGTTYLSNLPAMLDRRAEATLQPTADAMWDAFYVYAPGDRWQDPLPLPVAWGYPIMVTRDHLVREVDALIRK
Number of Associated Samples 82
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 6.80 %
% of genes near scaffold ends (potentially truncated) 27.18 %
% of genes from short scaffolds (< 2000 bps) 72.82 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.087 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(17.476 % of family members)
Environment Ontology (ENVO) Unclassified
(34.951 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.136 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 33.33%    β-sheet: 1.55%    Coil/Unstructured: 65.12%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF00403HMA 1.94
PF13229Beta_helix 1.94
PF13709DUF4159 1.94
PF13649Methyltransf_25 1.94
PF00069Pkinase 1.94
PF03466LysR_substrate 1.94
PF12833HTH_18 0.97
PF11954DUF3471 0.97
PF00072Response_reg 0.97
PF13470PIN_3 0.97
PF13432TPR_16 0.97
PF00581Rhodanese 0.97
PF08281Sigma70_r4_2 0.97
PF11937DUF3455 0.97
PF04542Sigma70_r2 0.97
PF16576HlyD_D23 0.97
PF02771Acyl-CoA_dh_N 0.97
PF01402RHH_1 0.97
PF03459TOBE 0.97
PF04191PEMT 0.97
PF13360PQQ_2 0.97
PF01048PNP_UDP_1 0.97
PF12706Lactamase_B_2 0.97
PF02694UPF0060 0.97
PF02321OEP 0.97
PF14534DUF4440 0.97
PF02133Transp_cyt_pur 0.97
PF07638Sigma70_ECF 0.97
PF12840HTH_20 0.97
PF07690MFS_1 0.97
PF08768THAP4_heme-bd 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 7.77
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.94
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 1.94
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 1.94
COG2608Copper chaperone CopZInorganic ion transport and metabolism [P] 1.94
COG0775Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnBNucleotide transport and metabolism [F] 0.97
COG0813Purine-nucleoside phosphorylaseNucleotide transport and metabolism [F] 0.97
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.97
COG1742Uncharacterized inner membrane protein YnfA, drug/metabolite transporter superfamilyGeneral function prediction only [R] 0.97
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.97
COG2820Uridine phosphorylaseNucleotide transport and metabolism [F] 0.97
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.97
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.97

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.09 %
UnclassifiedrootN/A2.91 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352024|deeps_contig07401.4972All Organisms → cellular organisms → Bacteria → Acidobacteria1541Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105651586All Organisms → cellular organisms → Bacteria → Acidobacteria2085Open in IMG/M
3300000789|JGI1027J11758_11553227All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29562Open in IMG/M
3300000956|JGI10216J12902_103531346All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291078Open in IMG/M
3300004156|Ga0062589_100478334All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291042Open in IMG/M
3300004157|Ga0062590_100506424All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291031Open in IMG/M
3300004157|Ga0062590_100906916All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29826Open in IMG/M
3300004479|Ga0062595_100390367All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29991Open in IMG/M
3300004480|Ga0062592_100274720All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291255Open in IMG/M
3300004643|Ga0062591_100737032All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29898Open in IMG/M
3300005171|Ga0066677_10030355All Organisms → cellular organisms → Bacteria → Acidobacteria2583Open in IMG/M
3300005295|Ga0065707_10139625All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291790Open in IMG/M
3300005340|Ga0070689_100298695All Organisms → cellular organisms → Bacteria → Acidobacteria1340Open in IMG/M
3300005354|Ga0070675_100000039All Organisms → cellular organisms → Bacteria82544Open in IMG/M
3300005354|Ga0070675_100000721All Organisms → cellular organisms → Bacteria23013Open in IMG/M
3300005355|Ga0070671_101001163All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29732Open in IMG/M
3300005468|Ga0070707_100994470All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300005471|Ga0070698_100067929All Organisms → cellular organisms → Bacteria → Acidobacteria3584Open in IMG/M
3300005518|Ga0070699_100169955All Organisms → cellular organisms → Bacteria → Acidobacteria1931Open in IMG/M
3300005526|Ga0073909_10323546All Organisms → cellular organisms → Bacteria → Acidobacteria707Open in IMG/M
3300005543|Ga0070672_102155758All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29502Open in IMG/M
3300005545|Ga0070695_101192054All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29626Open in IMG/M
3300005545|Ga0070695_101680076All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29531Open in IMG/M
3300005561|Ga0066699_11266974All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300005713|Ga0066905_101192255All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29680Open in IMG/M
3300005843|Ga0068860_102601878Not Available525Open in IMG/M
3300005844|Ga0068862_100340422All Organisms → cellular organisms → Bacteria1389Open in IMG/M
3300006058|Ga0075432_10015071All Organisms → cellular organisms → Bacteria2634Open in IMG/M
3300006844|Ga0075428_100542738All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291243Open in IMG/M
3300006845|Ga0075421_100490674All Organisms → cellular organisms → Bacteria → Acidobacteria1461Open in IMG/M
3300006847|Ga0075431_100681992All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291006Open in IMG/M
3300006852|Ga0075433_10836725All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29803Open in IMG/M
3300006852|Ga0075433_11235855All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300006854|Ga0075425_100000083All Organisms → cellular organisms → Bacteria82201Open in IMG/M
3300006903|Ga0075426_10032343All Organisms → cellular organisms → Bacteria → Acidobacteria3739Open in IMG/M
3300006904|Ga0075424_100141354All Organisms → cellular organisms → Bacteria → Acidobacteria2549Open in IMG/M
3300006904|Ga0075424_100688070All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291092Open in IMG/M
3300006914|Ga0075436_100555163All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium843Open in IMG/M
3300007076|Ga0075435_100071934All Organisms → cellular organisms → Bacteria → Acidobacteria2824Open in IMG/M
3300007076|Ga0075435_100171100All Organisms → cellular organisms → Bacteria → Acidobacteria1832Open in IMG/M
3300007255|Ga0099791_10061586All Organisms → cellular organisms → Bacteria → Acidobacteria1690Open in IMG/M
3300009090|Ga0099827_10577673All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29968Open in IMG/M
3300009090|Ga0099827_11714658All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29547Open in IMG/M
3300009094|Ga0111539_10019371All Organisms → cellular organisms → Bacteria8400Open in IMG/M
3300009147|Ga0114129_10156882All Organisms → cellular organisms → Bacteria → Acidobacteria3111Open in IMG/M
3300009147|Ga0114129_12460258All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29623Open in IMG/M
3300009177|Ga0105248_10807205All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291059Open in IMG/M
3300009177|Ga0105248_10931585All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29981Open in IMG/M
3300010400|Ga0134122_10064470All Organisms → cellular organisms → Bacteria → Acidobacteria2836Open in IMG/M
3300010400|Ga0134122_10077989All Organisms → cellular organisms → Bacteria → Acidobacteria2587Open in IMG/M
3300010401|Ga0134121_10608606All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291023Open in IMG/M
3300011119|Ga0105246_11250671All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29686Open in IMG/M
3300012203|Ga0137399_10061065All Organisms → cellular organisms → Bacteria → Acidobacteria2788Open in IMG/M
3300012203|Ga0137399_10192329All Organisms → cellular organisms → Bacteria → Acidobacteria1652Open in IMG/M
3300012685|Ga0137397_10048917All Organisms → cellular organisms → Bacteria3031Open in IMG/M
3300012685|Ga0137397_10804887All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29697Open in IMG/M
3300012912|Ga0157306_10346040All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29562Open in IMG/M
3300012918|Ga0137396_10042090All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3092Open in IMG/M
3300012918|Ga0137396_11022706All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29597Open in IMG/M
3300012922|Ga0137394_10002185All Organisms → cellular organisms → Bacteria14412Open in IMG/M
3300012922|Ga0137394_10631527All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29905Open in IMG/M
3300012927|Ga0137416_10361618All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1220Open in IMG/M
3300012944|Ga0137410_10948654All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29730Open in IMG/M
3300013297|Ga0157378_13020508All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29522Open in IMG/M
3300014745|Ga0157377_10055938All Organisms → cellular organisms → Bacteria → Acidobacteria2239Open in IMG/M
3300015241|Ga0137418_10591806All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29871Open in IMG/M
3300015245|Ga0137409_10034034All Organisms → cellular organisms → Bacteria4926Open in IMG/M
3300015371|Ga0132258_10029264All Organisms → cellular organisms → Bacteria12260Open in IMG/M
3300015371|Ga0132258_10535989All Organisms → cellular organisms → Bacteria → Acidobacteria2932Open in IMG/M
3300015372|Ga0132256_102929443All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300018000|Ga0184604_10036760All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291281Open in IMG/M
3300018075|Ga0184632_10282336All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29721Open in IMG/M
3300018469|Ga0190270_10219834All Organisms → cellular organisms → Bacteria → Acidobacteria1624Open in IMG/M
3300018469|Ga0190270_10460994All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291198Open in IMG/M
3300022756|Ga0222622_10417957All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29947Open in IMG/M
3300025922|Ga0207646_10710036All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300025926|Ga0207659_10001100All Organisms → cellular organisms → Bacteria16022Open in IMG/M
3300025926|Ga0207659_11508441Not Available575Open in IMG/M
3300025930|Ga0207701_10317922All Organisms → cellular organisms → Bacteria → Acidobacteria1350Open in IMG/M
3300025931|Ga0207644_11364087All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29596Open in IMG/M
3300025961|Ga0207712_11213261All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29673Open in IMG/M
3300026315|Ga0209686_1124637All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29851Open in IMG/M
3300027819|Ga0209514_10123998All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291447Open in IMG/M
3300027821|Ga0209811_10106467All Organisms → cellular organisms → Bacteria → Acidobacteria1012Open in IMG/M
3300027907|Ga0207428_10456469All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29931Open in IMG/M
3300027909|Ga0209382_12268599All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300028536|Ga0137415_10038971All Organisms → cellular organisms → Bacteria → Proteobacteria4653Open in IMG/M
3300028536|Ga0137415_10915965All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29687Open in IMG/M
3300028715|Ga0307313_10115084All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29821Open in IMG/M
3300031057|Ga0170834_102121221All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29566Open in IMG/M
3300031093|Ga0308197_10042759All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300031231|Ga0170824_106589210All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29617Open in IMG/M
3300031446|Ga0170820_17489759All Organisms → cellular organisms → Bacteria → Acidobacteria946Open in IMG/M
3300031538|Ga0310888_10028406All Organisms → cellular organisms → Bacteria2438Open in IMG/M
3300031720|Ga0307469_10091320All Organisms → cellular organisms → Bacteria → Acidobacteria2104Open in IMG/M
3300031720|Ga0307469_11831238Not Available587Open in IMG/M
3300031908|Ga0310900_10004397All Organisms → cellular organisms → Bacteria6329Open in IMG/M
3300032000|Ga0310903_10099068All Organisms → cellular organisms → Bacteria → Acidobacteria1236Open in IMG/M
3300032163|Ga0315281_10010416All Organisms → cellular organisms → Bacteria12821Open in IMG/M
3300032163|Ga0315281_10379447All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291527Open in IMG/M
3300032163|Ga0315281_11671823All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29618Open in IMG/M
3300032256|Ga0315271_10409356All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291138Open in IMG/M
3300034670|Ga0314795_109071All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere17.48%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil16.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.85%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment3.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.88%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.91%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.91%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.94%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.94%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.94%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.94%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.97%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.97%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.97%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.97%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352024Bare-fallow DEEP SOILEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300027819Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300034670Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deeps_006389802199352024SoilMAAARWAERDLLEALPHADVRVYAIWFAMYPGDARAKWPGALMTDARVIHFWDEERVSGTRYLSPLPALLGRRAAGTLQPTADALWDAFFVYPPGTTWQDPVPLPASWGYPIMVTRDALVQNVEGLLAGVK
INPhiseqgaiiFebDRAFT_10565158643300000364SoilMYPGDARSKWSASLLPDPRVSHYWDESRVLGELYMDRLPAILARRAPATLPPSADAMWDAFFVYAPGDGWQEPLPMPRLWGYPIMVTRDQLVRELQTVAAIPKP*
JGI1027J11758_1155322713300000789SoilMYPGDARSKWSASLLPDPRVSHYWDESRVLGELYMDWLPAILARRAPATLPPSADAMWDAFFVYAPGDGWQEPLPMPRLWGYPIMVTRDQLVRELQTVAAIPKP*
JGI10216J12902_10353134613300000956SoilMQTHSSADLRVYAIWFNMYPGDARSKWPGTLLTDARVFHYWDENRIVGTRYLSDLPALLERRAAATLPPTADAIWDAFFLYERGSKWKDPVPVPMSWGYPIMVTRDQFLRDIEATIGK*
Ga0062589_10047833433300004156SoilMYPGDARSKWPDGLLTDQRVLHYWDQERVVGVRYLSNLAAMLAQRAPETVVPTADAMWDAFYVYGRGARWQDPTPIPLSWGYPIMVTHNQLIADLEHLLQPPVAF*
Ga0062590_10050642433300004157SoilMYPGDARSKWSAALLADPRVSHYWDDSRVLGELYMNQLPAILARRAPATLPPSADAMWDAFFVYAPGDEWQEPLPMPRLWGYPIMVTRDQLARELQTVATIPKP*
Ga0062590_10090691623300004157SoilKAARWAQQELLQRFKTNDLRIYALWFNMYPGDARSKWPDGLLTDQRVLHYWDQERVVGVRYLSNLAAMLAQRAPETVVPTADAMWDAFYVYGRGARWQDPTPIPLSWGYPIMVTHNQLIADLEHLLQPPVAF*
Ga0062595_10039036723300004479SoilMYPGDARARWPSALLTDPRVAHYWDDQRALGTAYLSNLPAMLDRRVETTLPPVADAMWDAFFLYAPGDRWQEPLPLPVAWGYPIMVTRDQFLREVKALIGR*
Ga0062592_10027472013300004480SoilMYPGDARSKWPDGLLTDQRVLHYWDQERVVGVRYLSNLAAMLAQRAPETVVPTADAMWDAFYVYGRGARWQDPTPIPLSWGYPIMVTHNQLIADLEHLLQPR*
Ga0062591_10073703223300004643SoilMYPGDARSKWPDGLLTDQRVLHYWDQERVVGVRYLSNLAAMLAQRAPETVVPTADAMWDAFYVYARGARWQDPTPIPLSWGYPIMVTHNQLIADLEHLLQPPVAF*
Ga0066677_1003035533300005171SoilMYPGDARSKWPSALLTDRRVAHYWDEQRALGTTYLSNLPAMLDRRAEATLQPTADAMWDAFYVYAPGDRWQDPLPLPVAWGYPIMVTRDHLVREVDALIRK*
Ga0065707_1013962523300005295Switchgrass RhizosphereMYPGDARAKWPPTLLTDQRVAHYWDERRALGTAYLSNLPPMLDRRAEGTLQPTADAMWDAFFLYPPGDRWRDPLPLPIRWGYPIMPTSEQLARELDAIPHK*
Ga0070689_10029869513300005340Switchgrass RhizosphereMYPGDARSKWPDGLLTDQRVLHYWDQERVVGVRYLSNLAAMLAQRAPETVVPTADAMWDAFYVYGRGARWQDPTPIPLSWGYPIMVTHNQL
Ga0070675_100000039333300005354Miscanthus RhizosphereMYPGDARSKWSAALLADPRVSHYWDESRVLGELYMNQLPAILARRAPATLPPSADAMWDAFFVYAPGDGWQEPLPMPRLWGYPIMVTRDQLARELQTVATIPKP*
Ga0070675_10000072163300005354Miscanthus RhizosphereMYPGDARSKWPDGLLTDQRVLHYWDQERVVRVRYLSNLAAILAQRAPETVVPTADAMWDAFYVYGRGARWQDPTPIPLSWGYPIMVTHNQLIADLEHLLQPR*
Ga0070671_10100116313300005355Switchgrass RhizosphereMYPGDARAKWPPTLLTDQRVSHYWDERRALGTAYLSNLPAMLDRRAEATLQPTADAMWDAFFLYPPGDRWRDPLPLAIRWGYPIMPTSEQLARELDAIRISEPPPFADLLN*
Ga0070707_10099447013300005468Corn, Switchgrass And Miscanthus RhizosphereMYAGDARSKWPQALLTDRRVSHYWDEPRTLGASYLMRLPAMLDRRAQATMQPTADAMWDAFYVYGPDDSWVDPVPIPVRWGYPIMVTREEVAGAIEQFLPE*
Ga0070698_10006792923300005471Corn, Switchgrass And Miscanthus RhizosphereMYPGDGRSKWLSTLLTDARVTHYWDERRTVGTAYLANLSTMLARRAETTLMPTEDAMWDAFYVYGADDRWRDPLPLPVAWGYPIMVTRDRLVREVDALLMK*
Ga0070699_10016995543300005518Corn, Switchgrass And Miscanthus RhizosphereMYAGDARSKWPQALLTDRRVSHYWDEPRTLGASYLMRLPAMLDRRAQATMQPTADAMWDAFYVYGPDDSWVDPVPIPVRWGYPIMVTREEVAGAIEQFLPK*
Ga0073909_1032354623300005526Surface SoilMYPGDARSKWPAGSLTDPRVLHFWDEQRISGTRYLAHLPALLERRAPETMQPSADVMWDAFYVYPPGDRWRDPVPAPVSWGYPIMVTRQELLSQVDALLMK*
Ga0070672_10215575813300005543Miscanthus RhizosphereMYPGDARAKWPPTLLTDQRVSHYWDERRALGTAYLSNLPAMLDRRAVATLQPTADAMWDAFFLYPPGDRWRDPLPLPLRWGYPIMPTSEQLARELD
Ga0070695_10119205413300005545Corn, Switchgrass And Miscanthus RhizosphereMYPGDARSKWPPTLLTDRRVLHYWDEARVIGRLYLPRLAAMSDRRATATLRPTGDALWDAFFLYPPGGLWEDPVPLPIRWGYPIMVTRDQLRREVDGLLQK*
Ga0070695_10168007613300005545Corn, Switchgrass And Miscanthus RhizosphereVYAIWFNMYPGDARSKWPSTLLTDRRVLHYWDEERAVGKRYLSHVPAMMGRRAAATLAPEADALWDAFFVYAPDDPWQEPIPVPVSWGYPIMVTRDRLLGDVARLSK*
Ga0066699_1126697423300005561SoilMYPGDARSKWPPSLLTDPRVLHYWDEERIIGTRYLAHLAAMMDRRAPATMPPSADAMWDAFYVYPRGGRWQEPVPLPVSWGYPIMVTREQLVEQADALLKK*
Ga0066905_10119225523300005713Tropical Forest SoilMYPGDARSKWPESLLVDPRVLHYWDEERVAGQRYMAYLPAMLERRAPGTLPPAADVMWDAFFVYPRGDRWQEPVPSPAAWGYPIMVTRDHLLRQVGALLEK*
Ga0068860_10260187813300005843Switchgrass RhizospherePGDARGKWPPTLLTDQRVSHYWDERRALGTAYLSNLPAMLDRRAEATLQPTADAMWDAFFLYPPGDRWRDPLPLPLRWGYPIMPTSEELARELDALPHR*
Ga0068862_10034042213300005844Switchgrass RhizosphereARSKWSAALLADPRVSHYWDESRVLGELYMNQLPAILARRAPATLPPSADAMWDAFFVYAPGDGWQEPLPMPRLWGYPIMVTRDQLARELQTVATIPKP*
Ga0075432_1001507113300006058Populus RhizosphereVYAIWFNMYPGDARSKWPSTLLTDRRVLHYWDEERAVGKKYLSHIPAMMGRQAAATLAPEADTLWDAFLVYAPDDRWQGPIPVPVSWGYPIMVTRDQLLGDVARLSR*
Ga0075428_10054273833300006844Populus RhizosphereVQRDLLSRHPSANVRVYALWFNMYPGDARAKWPATLLTDPRVLHFWDEPRIAGTRYMAQLPAMLARRAPETRPPDGDVLWDAFFVYPPGDRWQDPVPVPVGWGYPIMVTSDTLRQQLEALLPK*
Ga0075421_10049067423300006845Populus RhizosphereVQRDLLSRHPSANVRVYALWFNMYPGDARAKWPATLLTDARVLHFWDEPRIAGTRYMAQLPAMLARRAPETRPPDGNVLWDAFFVYPPGDTWRDPVPVPAGWGYPIMVTSDTLRRQLDALVPK*
Ga0075431_10068199223300006847Populus RhizosphereVQRDLLSRHPSANLRVYALWFNMYPGDARAKWPATLLTDARVLHFWDEPRIAGTRYMAQLPAMLARRAPETRPPDGNVLWDAFFVYPPGDTWRDPVPVPAGWGYPIMVTSDTLRRQLDALVPK*
Ga0075433_1083672523300006852Populus RhizosphereWAQQNLLGRFPTSDLRVYAIWFNMYPGDARSKWPSALLTDPRVLHYWDDQRISGTRYLDQLPALMDRRAPATLPPAADAMWDAFFVYAPGDRWKSPVPLPVTWGYPIMVTHEHLLRHVEMLLTK*
Ga0075433_1123585513300006852Populus RhizosphereDARSKWPESLLIDPRVLHYWDEERISGKQYLTHLPAMLDRRAPETMTPSADAMWDAYYVYPRGEHWRGPVPLPASWGYPIMVTREQLVEQADTLLKK*
Ga0075425_100000083123300006854Populus RhizosphereMYPGDARSKWPPTALTDARVTHFWDEARALGASYLTRLPAMLDRRAPGTMPPSADAMWDAFYVYGPDARWEDPVPLPLAWGYPIMVTREELTRAVGGAINY*
Ga0075426_1003234333300006903Populus RhizosphereMYPGDARSKWPGQLMTDSRALHYWDEERVVGTRYLSQLPALLGRRAAATMVPTGDALWDAFFVYERGATWQDPVPVPLSWGYPIMVTRDQLVADIEARIAK*
Ga0075424_10014135453300006904Populus RhizosphereMYAGDARSKWPQALLTDRRVSHYWDEPRTLGASYLMRLPAMLDRRAQATMQPTADAMWDAFYVYGPDDSWVDPVPIPVRWGYPIMVTREEV
Ga0075424_10068807023300006904Populus RhizosphereVNAARWAQQNLLGRFPTSDLRVYAIWFNMYPGDARSKWPSALLTDPRVLHYWDDQRISGTRYLDQLPALMDRRAPATLPPAADAMWDAFFVYAPGDRWKSPVPLPVTWGYPIMVTHEHLLRHVEMLLTK*
Ga0075436_10055516323300006914Populus RhizosphereRSKWPSTLLTDRRVLHYWDEERAVGKKYLSHIPAMMGRQAAATLAPEADTLWDAFLVYAPDDRWQGPIPVPVSWGYPIMVTRDQLLGDVARLSR*
Ga0075435_10007193443300007076Populus RhizospherePGDARSKWPSTLLTDRRVLHYWDEERAVGKKYLSHIPAMMGRQAAATLAPEADTLWDAFLVYAPDDRWQGPIPVPVSWGYPIMVTRDQLLGDVARLSR*
Ga0075435_10017110013300007076Populus RhizosphereVYAIWFNMYPGDARSKWPSTLLTDRRVLHYWDEERAVGRKYLSHIPAMMGRQAAATLAPEADALWDAFLVYAPDDRWQGPIPVPVSWGYPIMVTRDQLLGDVARLSR*
Ga0099791_1006158613300007255Vadose Zone SoilMYPGDARSKWPSALLTDQRVAHYWDEQRALGTAYLSNFPAMLDRRAEATLQPTADAMWDAFFLYAPGDLWRDSLPLPTAWGYPIMVTRDLSFAKIHPGSPCRVRFVQGLRR
Ga0099827_1057767333300009090Vadose Zone SoilMYPGDGRSKWPSTLLTDARVTHYWDEQRTVGTAYLVNLTAMLTRRAETTLMPTADAMWDAFYVYGADDGWRDPLPLPLAWGYPIMVTHDRLVRGRRASGEMI*
Ga0099827_1171465813300009090Vadose Zone SoilMYPGDARSKWPSALLTDQRVAHYWDEQRALGTAYLSNLPAMLDRRADATLQPTADAMWDAFFLYAPDDLRREPVPLPITWGYPIMVTRDHLVREFDALVRK*
Ga0111539_1001937163300009094Populus RhizosphereVQRDLLSRHPSANVRIYALWFNMYPGDARAKWPATLLTDPRVLHFWDEPRVAGSRYMAQLPAMLARRAPETRPPDGEVLWDAFFVYPPGDTWRDPVPVPVGWGYPIMVTSDTLRQQLDALLAK*
Ga0114129_1015688263300009147Populus RhizosphereMYPGDARGRWPSTLLTDPRVLHYWDEERVVGRRYLSHLPAMIEQRAPATLPPAADAMWDAFFVYAPGNQWQDPVPVPVSWGYPIMVTRDQLLRDVATLVRK*
Ga0114129_1246025823300009147Populus RhizosphereNVRVYALWFNMYPGDARAKWPATLLTDARVLHFWDEPRIAGTRYMAQLPAMLARRAPETRPPDGNVLWDAFFVYPPGDTWRDPVPVPAGWGYPIMVTSDTLRRQLDALVPK*
Ga0105248_1080720523300009177Switchgrass RhizosphereMYPGDSRGKWPPTLLTDQRVSHYWDERRSLGTTYLSNLPAMLDRRAEGTLQPTADAMWDAFYLYAPGDRWQDPVPLPVRWGYPIIPTREQLARELDALPYR*
Ga0105248_1093158523300009177Switchgrass RhizosphereMYPGDARAKWPPTLLTDQRVSHYWDERRALGTAYLSNLPAMLDRRAEATLQPTADAMWDAFFLYPPGDRWRDPLPLPIRWGYPIMPTSEQLARELDAIRISEPPPFADLLN*
Ga0134122_1006447013300010400Terrestrial SoilVYAIWFNMYPGDARSKWPSTLLTDRRVLHYWDEERAVGKRYLSHVPAMMGRRAAATLAPEADALWDAFFVYAPDDPWQEPIPVPVSWGYPIMVTRDQLLGDVARLSK*
Ga0134122_1007798943300010400Terrestrial SoilMYPGDSRRKWPPTLLTDQRVSHYWDERRTLGTTYLSNLPAMLDRRAEGTLQPTADAMWDAFYLYAPRDRWQDPLPLPVRWGYPIIPTREQLARELDALPHK*
Ga0134121_1060860623300010401Terrestrial SoilMYPGDARAKWPPKLLTDPRVSHYWDERRALGTAYLSNLPAMLDRRAVATLQPTADAMWDAFFLYPPGDRWRDPLPLPIRWGYPIMPTSEQLARELDAIPHR*
Ga0105246_1125067123300011119Miscanthus RhizosphereMYPGDARAKWPPTLLTDRRVSHYWDERRALGTAYLSNLPAMLDRRAEATLQPTADAMWDAFFLYPPGDRWRDPLPLPLRWGYPIMPTSEELARELDALPHR*
Ga0137399_1006106513300012203Vadose Zone SoilVTAARWAQQELLEHHPRSELRVYAIWFNMYPGDARSKWPPTLLTDARVLHYWDEERAVGRRYLSHVPAMMDRRAAATLAPAADAMWDAFFVYAPDDRWQEPVPVPVSWGYPIMVTRDQLLRDFERLTK*
Ga0137399_1019232933300012203Vadose Zone SoilMYPGDARSKWPSALLTDQRVAHYWHEQRALGTAYLSNLPAMLDRRADTTLQPTADDMWDAFFLYAPGDLWREPLPLPITWGYPIMVTRDQLVREFDALVRK*
Ga0137397_1004891713300012685Vadose Zone SoilMYPGDARSKWPSALLTDQRVAHYWDEQRALGTAYLSNFPAMLDRRADATLQPTADAMWDAFFLYAPDDRWREPLPLPITWGYPIMVPRAQLVREFDALVQK*
Ga0137397_1080488713300012685Vadose Zone SoilMYPGDARARWPSALLTDQRVAHYWDDRRALGTAYLSNLPAMLDRRVEATLPPVADAMWDAFFLYAAGDRWREPLPLPVAWGYPIMVTRDQFLREVDALVRR*
Ga0157306_1034604013300012912SoilRFKTNDLRIYALWFNMYPGDARSKWPDGLLKDQRVLHYWDQERVVGVRYLSNLAAMLAQRAPETVVPTADAMWDAFYVYARGARWQDPTPIPLSWGYPIMVTHNQLIADLEHLLQPR*
Ga0137396_1004209053300012918Vadose Zone SoilVTAARWAQQELLEHHPRSELRVYAIWFNMYPGDARSKWPPTLLTDARVLHYWDEERAVGRRYLSHVPAMMDRRAAATLAPAADAVWDAFFVYAPDDRWQEPVPVPVSWGYPIMVTRDQLLRDFERLTK*
Ga0137396_1102270613300012918Vadose Zone SoilMYPGDGRSKWPSTLLTDARVIHCWDERRTVGTAYLANLTAMLTRRAETTLMPTADAMWDAFYVYGADDRWRDPLPLPIAWGYPIMVTRDRLVREVDALLA
Ga0137394_1000218523300012922Vadose Zone SoilMYPGDARSKWPSALLTDQRVAHYWDEQRALGTAYLSNFPAMLDRRADATLQPTADAMWDAFFLYAPDDRWREPLPLPITWGYPIMVTRDHLLREFDALVRK*
Ga0137394_1063152713300012922Vadose Zone SoilVYAIWFNMYPGDARSKWPSTLLTDRRVLHYWDEERAVGRKYLSHIPAMMGRRAAATLPPEADALWDAFLVYAPDDRWQEPIPVPVSWGYPIMVTRDQLLGDVAHLSK*
Ga0137416_1036161823300012927Vadose Zone SoilVTAARWAQQELLEHHPRSELRVYAMWFNMYPGDARSKWPPTLLTDARVLHYWDEERAVGRRYLSHVPPMMDRRAAATLAPAADAVWDAFFVYAPDDRWQEPVPVPVSWGYPIMVTRDQLLRDFERLTK*
Ga0137410_1094865413300012944Vadose Zone SoilVYAIWFNMYPGDARSKWPSTLLTDRRVLHYWDEERAVGKKYLSHVPAMMARRAAATLAPEADALWDAFLVYAPDDPWQEPVPVPVS
Ga0157378_1302050813300013297Miscanthus RhizosphereWFNMYPGDARSKWPPTLLTDLLVFHYWDVTRVIGRLYLPRLPAMTDRRATATLRPTGDALWDAFFLYPPGGGWEDPVPLPIRWGYPIMVTRDQLRSEVDGLVQK*
Ga0157377_1005593813300014745Miscanthus RhizosphereMYPGDARSKWPDGLLTDQRVLHYWDQERVVRVRYLSNLAAMLAQRAPETVVPTADAMWDAFYVYARGARWQDPTPIPLSWGYPIMVTHNQLIADLEHLLQPPVAF*
Ga0137418_1059180623300015241Vadose Zone SoilVTAARWAQQELLEHHPRSELRVYAIWFNMYPGDARSKWPPTLLTDARVLHYWDEERAVGRRYPSHVPAMMDRRAAATLAPAADAVWDAFFVYAPDDRWQEPVPVPVSWGYPIMVTRDQLLRDCERLTK*
Ga0137409_1003403423300015245Vadose Zone SoilVYAIWFNMYPGDARSKWPPTLLTDARVLHYWDEERAVGRRYLSHVPAMMDRRAAATLAPAADAVWDAFFVYAPDDRWQEPVPVPVSWGYPIMVTRDQLLRDFERLTK*
Ga0132258_1002926433300015371Arabidopsis RhizosphereMYPGDARSKWSAALLADPRVSHYWDESRVLGELYMNQLPAILARRAPATLPPSADAMWDAFFVYAPGDGWQEPLPMPRLWGYPIMVTRDQLAGELQTVATIPKP*
Ga0132258_1053598933300015371Arabidopsis RhizosphereMYPGDARSKWSPTLLTDPRVLHYWDEAREIGRLYRPRLPAMSDRRAAATLQPTEDALWDAFFLYPPGGRWEDPVPVPIRWGYPIMVTRDQLRREVDALVQK*
Ga0132256_10292944313300015372Arabidopsis RhizosphereMYPGDARSKWPAGLLTDPRVLHFWDEQRGSGTRYLAHLPALLARTAPGTMQPSADVMWDAFYVYPPGDRWQDPVPV
Ga0184604_1003676023300018000Groundwater SedimentMYPGDARAKWPPTLLTDRRVAHYWDERRALGTAYLSNLPAMLDRRAEATRQPTADAMWDAFFLYPRGDRWREPLPLPIRWGYPIMTTREELARELDALPH
Ga0184632_1028233623300018075Groundwater SedimentMYPGDARARWPSTLLTDPRVAHYWDDQRALGTAYLSNLPAMLDRRVEATLPPVADAMWDAFFLYAPGDRWQDPLPLPVAWGYPIMVTRDQFLREVN
Ga0190270_1021983433300018469SoilMYPGDARRKWPPTLLTDQRVAHYWDEQRTLGTTYLSNLTAMLDRRAEATRQPTADAMWDAFYLYPPGDRWQDPLPLPIRWGYPIMPTREELARELDSLPEQMRP
Ga0190270_1046099423300018469SoilMLLTDRRVAHYWDEHRALGTAYLSNLPRMLDGRAEATLQPTADAMWDAFYLYAPGDRWQEPLPLPVRWGYPIMPTREQLARELDAIAGK
Ga0222622_1041795713300022756Groundwater SedimentMYPGDARAKWPPTLLTDQRVAHYWDERRALGTAYLSNLPAMLDRRAEGTLQPTADAMWDAFFLYRAGDRWRDPLPLPIRWGYPIMPTSE
Ga0207646_1071003623300025922Corn, Switchgrass And Miscanthus RhizosphereMYAGDARSKWPQALLTDRRVSHYWDEPRTLGASYLMRLPAMLDRRAQATMQPTADAMWDAFYVYGPDDSWVDPVPIPVRWGYPIMVTREEVAGAIEQFLPE
Ga0207659_1000110053300025926Miscanthus RhizosphereMYPGDARSKWPDGLLTDQRVLHYWDQERVVRVRYLSNLAAILAQRAPETVVPTADAMWDAFYVYGRGARWQDPTPIPLSWGYPIMVTHNQLIADLEHLLQPR
Ga0207659_1150844113300025926Miscanthus RhizospherePESLLVDPRVLHYWDEERISGKQYLTHLPAMLDRRAPETMTPSADAMWDAYYVYPRGEHWRGPVPLPASWGYPIMVTREQLVEQADTLLKK
Ga0207701_1031792213300025930Corn, Switchgrass And Miscanthus RhizosphereMYPGDARAKWPPTLLTDQRVSHYWDERRALGTAYLSNLPAMLDRRAVATLQPTADAMWDAFFLYPPGDRWRDPLPLPLRWGYPIMPTSEELARELDALPHR
Ga0207644_1136408723300025931Switchgrass RhizosphereMYPGDARAKWPPTLLTDQRVSHYWDERRALGTAYLSNLPAMLDRRAEATLQPTADAMWDAFFLYPPGDRWRDPLPLAIRWGYPIMPTSEQLARELDAIPHK
Ga0207712_1121326123300025961Switchgrass RhizosphereMYPGDARAKWPPTLLTDQRVSHYWDERRALGTAYLSNLPAMLDRRAVATLQPTADAMWDAFFLYPPGDRWRDPLPLPLRWGYPIMPTSEQLARELDALPHR
Ga0209686_112463733300026315SoilMYPGDARSKWPSALLTDRRVAHYWDEQRALGTTYLSNLPAMLDRRAEATLQPTADAMWDAFYVYAPGDRWQDPLPLPVAWGYPIMVTRDHLVREVDALIRK
Ga0209514_1012399833300027819GroundwaterMYPGDARAKWPATALTDPRVRHRWDETRALGRQYLASVPAIMDRRAAETLPPTADAMWDAFFLYAPGESWQDPLPLPVAWGYPIMVTRGHLARQLDALVAR
Ga0209811_1010646723300027821Surface SoilMYPGDARSKWPAGSLTDPRVLHFWDEQRISGTRYLAHLPALLERRAPETMQPSADVMWDAFYVYPPGDRWRDPVPAPVSWGYPIMVTRQELLSQVDALLMK
Ga0207428_1045646933300027907Populus RhizosphereVYAIWFNMYPGDARSKWPSTLLTDRRVLHYWDEERAVGKKYLSHIPAMMGRQAAATLAPEADTLWDAFLVYAPDDRWQGPIPVPVSWGYPIMVTRDQLLGDVARLSR
Ga0209382_1226859913300027909Populus RhizosphereSRVVHCWDEERIAGKQYLSHLSAMLDRRAPATLPPAADAMWDAFFVYAPGATWRDPVPLPVSWGYPIMVTRDQLLMDVESAIRK
Ga0137415_1003897123300028536Vadose Zone SoilMWFNMYPGDARSKWPPTLLTDARVLHYWDEERAVGRRYLSHVPPMMDRRAAATLAPAADAVWDAFFVYAPDDRWQEPVPVPVSWGYPIMVTRDQLLRDFERLTK
Ga0137415_1091596523300028536Vadose Zone SoilMYPGDGRSKWPSTLLTDARVIHCWDERRTVGTAYLANLTAMLTRRAETTLMPTADAMWDAFYVYGADDRWRDPLPLPIAWGYPIMVTRDRLVREVDALLAK
Ga0307313_1011508423300028715SoilMYPGDARAKWPPTLLTDQRVAHYWDERRALGTAYLSNLPAMLDRRAEGTLQPTADAMWDAFFLYRAGDRWRDPLPLPIRWGYPIMPTSEQLAQELDALKGTPAS
Ga0170834_10212122123300031057Forest SoilMYPGDARSKWPAGLLTDPRVLHFWDEQRISGTRYLAHLPAFLERRAAETMQPSADVMWDAFYVYPPGDRWRDPV
Ga0308197_1004275913300031093SoilKWPPTLLTDRRVTHYWDERRALGTAYLSNLPAMLDRRSEATLQPTADAMWDAFFLYRAGDRWRDPLPLPIRWGYPIMPTSEQLAQELDALKGTPAS
Ga0170824_10658921023300031231Forest SoilMYPGDARSKWPAGLLTDPRVLHFWDEQRISGTRYLAHLPALLERRAAETMQPSADVMWDAYYVYPPGDRWRDPVPLPVSWGYPIMV
Ga0170820_1748975923300031446Forest SoilMYPGDARSKWPAGLLTDPRVLHFWDEQRISGTRYLAHLPALLERRAPETMQPSADVMWDAFYVYPPGDRWRDPVPVPASWGYPIMVTRQELLSQVDALLMK
Ga0310888_1002840623300031538SoilMYPGDARSKWSAALLADPRVSHYWDESRVLGELYMNQLPAILARRAPATLPPSADAMWDAFFVYAPGDGWQEPLPMPRLWGYPIMVTRDQLAGELQTVATIPKP
Ga0307469_1009132053300031720Hardwood Forest SoilMYAGDARSKWPQALLTDRRVSHYWDEPRTLGASYLMRLPAMLDRRAQATMQPTADAMWDAFYVYGPDDSWVDPVPIPVRWGYPIMVTREEVAGAIEQFLPK
Ga0307469_1183123823300031720Hardwood Forest SoilLIDPRVLHYWDEERISGKQYLTHLPAMLDRRAPETMTPSADAMWDAYYVYPRGEHWRGPVPVPASWGYPIMVTREQLVEQADALLKK
Ga0310900_1000439733300031908SoilMYPGDARSKWSAALLADPRVSHYWDESRVLGELYMNQLPAILARRAPATLPPSADAMWDAFFVYAPGDGWQEPLPMPRLWGYPIMVTRDQLARELQTVATIPKP
Ga0310903_1009906813300032000SoilMYPGDARSKWSAALLADPRVSHYWDESRVLGELYMNQLPAILARRAPATLPPSADAMWDAFFVYAPGDGWQEPLPMPRLWGYPIM
Ga0315281_1001041673300032163SedimentMYPGDARAKWPAALLTDLRVQHRWDETRALGRQYLANLPVMMDRRAAETMAPTADVMWDAFYLYAPGDAWRDPMPLPVAWGYPIMVTRAHLARQLDALVAR
Ga0315281_1037944723300032163SedimentMYPGDARAKWPATALTDARVRHRWDHARALGRQYLASVPAIMDRRAAETLPPTADAMWDAFFLYAPGESWQDPLPLPVAWGYPIMVTRRHLVRELDALVTR
Ga0315281_1167182313300032163SedimentMYPGDARAKWPTTVLTDPRVRHRWDEPRTIGRQYLASVPAILDRRAPETMPPTADVMWDAFFLYAPGDRWQDPLPMPVAWGYPIMVTRAHLARQLDALVAQ
Ga0315271_1040935623300032256SedimentMYPGDARAKWPAAALTDPRVQHRWDETRALGLQYLARVPAMLDRRVPDTRAPTADAMWDAFFLYAPDDAWQDPLPLPVSWGYPILVTREHLASELDALLAR
Ga0314795_109071_266_5623300034670SoilMYPGDARSKWSAALLADPRVSHYWDESRVLGELYMNQLPAILARRAPATLPSSADAMWDAFFVYAPGDGWQEPLPMPRLWGYPIMVTRDQLAGELQTVA

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Biomedical Sciences Research Center "Alexander Fleming"
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