NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F099030

Metagenome / Metatranscriptome Family F099030

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F099030
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 108 residues
Representative Sequence GRLAAPAGTSTVTVDVRGGNRRALRLVLGNARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPASTTITG
Number of Associated Samples 98
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.03 %
% of genes from short scaffolds (< 2000 bps) 97.09 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (92.233 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(9.709 % of family members)
Environment Ontology (ENVO) Unclassified
(24.272 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.718 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.18%    β-sheet: 24.81%    Coil/Unstructured: 62.02%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF00486Trans_reg_C 9.71
PF00072Response_reg 6.80
PF00672HAMP 0.97



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.23 %
UnclassifiedrootN/A7.77 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001538|A10PFW1_11537726All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium778Open in IMG/M
3300003998|Ga0055472_10246505All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium563Open in IMG/M
3300004114|Ga0062593_101604436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium706Open in IMG/M
3300004156|Ga0062589_102874614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria503Open in IMG/M
3300005093|Ga0062594_102057444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium612Open in IMG/M
3300005186|Ga0066676_10392288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria935Open in IMG/M
3300005329|Ga0070683_100530779All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300005335|Ga0070666_11006642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria618Open in IMG/M
3300005337|Ga0070682_101771397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria538Open in IMG/M
3300005338|Ga0068868_101165956All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium711Open in IMG/M
3300005435|Ga0070714_101081433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria781Open in IMG/M
3300005435|Ga0070714_101968924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria570Open in IMG/M
3300005438|Ga0070701_10905270All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria609Open in IMG/M
3300005440|Ga0070705_101758724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium525Open in IMG/M
3300005441|Ga0070700_102013600Not Available501Open in IMG/M
3300005445|Ga0070708_100194794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1896Open in IMG/M
3300005467|Ga0070706_100737542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium913Open in IMG/M
3300005526|Ga0073909_10289107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria741Open in IMG/M
3300005530|Ga0070679_100310849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1526Open in IMG/M
3300005540|Ga0066697_10742486Not Available535Open in IMG/M
3300005545|Ga0070695_101137788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium640Open in IMG/M
3300005617|Ga0068859_101782969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria680Open in IMG/M
3300005764|Ga0066903_104190999All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria772Open in IMG/M
3300005764|Ga0066903_106866291All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria591Open in IMG/M
3300005903|Ga0075279_10070144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria612Open in IMG/M
3300006794|Ga0066658_10835763All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria523Open in IMG/M
3300006854|Ga0075425_103109852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria506Open in IMG/M
3300006871|Ga0075434_101333540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria728Open in IMG/M
3300006904|Ga0075424_102646503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria524Open in IMG/M
3300009148|Ga0105243_11828685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria639Open in IMG/M
3300009176|Ga0105242_10584704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1076Open in IMG/M
3300009792|Ga0126374_11541018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium547Open in IMG/M
3300009840|Ga0126313_10060065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2708Open in IMG/M
3300010036|Ga0126305_10275710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1087Open in IMG/M
3300010301|Ga0134070_10257492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium655Open in IMG/M
3300010325|Ga0134064_10336196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria585Open in IMG/M
3300010366|Ga0126379_10285999All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1646Open in IMG/M
3300010366|Ga0126379_12158751All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria658Open in IMG/M
3300010398|Ga0126383_13003467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium551Open in IMG/M
3300010863|Ga0124850_1086523All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria919Open in IMG/M
3300012008|Ga0120174_1168662Not Available502Open in IMG/M
3300012011|Ga0120152_1043706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1488Open in IMG/M
3300012355|Ga0137369_10968496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium566Open in IMG/M
3300012360|Ga0137375_11115587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium611Open in IMG/M
3300012382|Ga0134038_1068468All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria526Open in IMG/M
3300012960|Ga0164301_11441745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria564Open in IMG/M
3300012971|Ga0126369_13569465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria510Open in IMG/M
3300013297|Ga0157378_11988247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria631Open in IMG/M
3300013308|Ga0157375_12770964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria586Open in IMG/M
3300013765|Ga0120172_1059337All Organisms → cellular organisms → Bacteria → Terrabacteria group971Open in IMG/M
3300014154|Ga0134075_10475591All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria558Open in IMG/M
3300014325|Ga0163163_10923111All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria936Open in IMG/M
3300014827|Ga0120171_1105772All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium703Open in IMG/M
3300015371|Ga0132258_11192092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1925Open in IMG/M
3300015372|Ga0132256_101960438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria692Open in IMG/M
3300015372|Ga0132256_102041806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria679Open in IMG/M
3300015373|Ga0132257_102525511All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria668Open in IMG/M
3300015374|Ga0132255_104256635Not Available607Open in IMG/M
3300016445|Ga0182038_12123064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria509Open in IMG/M
3300017656|Ga0134112_10395739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria570Open in IMG/M
3300017659|Ga0134083_10419456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria587Open in IMG/M
3300018027|Ga0184605_10025035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2426Open in IMG/M
3300018061|Ga0184619_10168815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1002Open in IMG/M
3300018071|Ga0184618_10509503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria504Open in IMG/M
3300018431|Ga0066655_10483306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria819Open in IMG/M
3300022756|Ga0222622_11299983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium535Open in IMG/M
3300025552|Ga0210142_1106092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium555Open in IMG/M
3300025903|Ga0207680_10328988All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1070Open in IMG/M
3300025910|Ga0207684_10177587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1836Open in IMG/M
3300025915|Ga0207693_11418863All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria515Open in IMG/M
3300025922|Ga0207646_11406448All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium607Open in IMG/M
3300025927|Ga0207687_10739229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria837Open in IMG/M
3300025931|Ga0207644_11107064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria666Open in IMG/M
3300025939|Ga0207665_11443270All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria547Open in IMG/M
3300025945|Ga0207679_11587675All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium600Open in IMG/M
3300026021|Ga0208140_1022000All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium887Open in IMG/M
3300026308|Ga0209265_1237044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria505Open in IMG/M
3300027821|Ga0209811_10212541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium732Open in IMG/M
3300027821|Ga0209811_10298618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria620Open in IMG/M
3300027882|Ga0209590_10102660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1711Open in IMG/M
3300028754|Ga0307297_10403819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium505Open in IMG/M
3300028768|Ga0307280_10275745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria609Open in IMG/M
3300028778|Ga0307288_10249236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium696Open in IMG/M
3300028787|Ga0307323_10377174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium508Open in IMG/M
3300028800|Ga0265338_10442780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium921Open in IMG/M
3300028819|Ga0307296_10326642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium837Open in IMG/M
3300028884|Ga0307308_10069470All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1664Open in IMG/M
3300028885|Ga0307304_10473941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria572Open in IMG/M
3300030336|Ga0247826_10679549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium797Open in IMG/M
3300030903|Ga0308206_1157513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium551Open in IMG/M
3300031831|Ga0318564_10120896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1166Open in IMG/M
3300031833|Ga0310917_10781633Not Available645Open in IMG/M
3300031845|Ga0318511_10267755All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria769Open in IMG/M
3300031896|Ga0318551_10297255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria908Open in IMG/M
3300031938|Ga0308175_101998421All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria650Open in IMG/M
3300032008|Ga0318562_10094705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1689Open in IMG/M
3300032044|Ga0318558_10523496Not Available592Open in IMG/M
3300032068|Ga0318553_10476354All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria654Open in IMG/M
3300032076|Ga0306924_12074666Not Available584Open in IMG/M
3300032180|Ga0307471_103507918All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium555Open in IMG/M
3300032261|Ga0306920_102377918All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria732Open in IMG/M
3300033289|Ga0310914_11554168All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria565Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere9.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.85%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost4.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.85%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.91%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.91%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.91%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.91%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.91%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.91%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.91%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.94%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.94%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.94%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.97%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.97%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.97%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.97%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300003998Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005903Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_303EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010863Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)EnvironmentalOpen in IMG/M
3300012008Permafrost microbial communities from Nunavut, Canada - A39_80cm_12MEnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012382Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013765Permafrost microbial communities from Nunavut, Canada - A30_80cm_6MEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014827Permafrost microbial communities from Nunavut, Canada - A3_80cm_18MEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025552Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026021Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404 (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_063954823300000033SoilIGASNQQTFTFGQDTIFLLWQGKVPSVISPAQLXVGDRVTVRXRAXKGSTLAQVESTPAVRVAEHEPANAR*
A10PFW1_1153772623300001538PermafrostHPAGIVADRGPNPNPPNKPLYLFRGKLTAAAGTNTVTLGVRGGNRPALRLLVGQSSQQSFTYGPETIFLLWQGKVPTVISPTQLTVGDRITVRIRAPRHSTLAQVESTAAAHIGEHEPPSTAVTS*
Ga0055472_1024650513300003998Natural And Restored WetlandsYLFRGRIAAVASGSVTVDVRGGNRRALRLLIGQGARQTFATGTETIFLLWQGKVPTVIAAAQLKVGDAVVVRVRAAARSSLAQVEATPAVHVGEHEPKTTTVTS*
Ga0062593_10160443613300004114SoilPTPPTRPLFLYRGTLAAPVGASSLTLNVRGGNRLALRTMIGQSNQQTFTYGPETIFLLWQGKVPSVIAPSQLTVGERVTIRIRAPRRSTLSQVESTPARHVGEHEPANTSVTS*
Ga0062589_10287461413300004156SoilVAAPAGTSTLAVDVRGGNRRALRLVLGNARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWRSTLAQVESTPAVHVGEHEPASTTITG*
Ga0062594_10205744423300005093SoilSSVTLNVKGGNRNALRLLLGAPSQQSFTYGAETIFLLWQGRIPTVITPSQLTVGDRVTVRIRAAKGSTLGQVEATAANRVAEHEPANAKVVG*
Ga0066676_1039228833300005186SoilRLLLGNTRQQSFTFGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPPSTTITG*
Ga0070683_10053077933300005329Corn RhizosphereNASLSQVESRPAGIVADRVAKPNRPTYPLFLFKGTVAAPAGTSTLAVDVRGGNRRALRLVLGNARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWRSTLAQVESTPAVHVGEHEPASTTITG*
Ga0070666_1100664213300005335Switchgrass RhizosphereSVTLDVRGGNRHALRLLIGSGRQQTFSFGQDTIFLLWQGKVPTVITAAQLKVGDRVAVRIRAAKGSTLSQVESTPAARVAEHEPANAK*
Ga0070682_10177139723300005337Corn RhizosphereGRLAAPAGTSTVTVDVRGGNRRALRLVLGNARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWRSSLAQVESTPAVHVGEHEPASTTITG*
Ga0068868_10116595623300005338Miscanthus RhizosphereDRVKEPTPPGNPLYLFRGTHASPAGANSVTLDVRGGNRHALRLLIGSGRQQTFSFGQDTIFLLWQGKVPTVITPAQLKVGDRVAVRIRAAKGSTLSQVESTPAARVAEHEPANAK*
Ga0070714_10108143313300005435Agricultural SoilAGVVADRGPNPTTASKPLFLFRGKLAAPAGTSSVTLDVKGGNRHGLRLLIGQSTQQSFAFGPETIFLRWQGKVPTVIAASDLQVGDQVTVRVRAAKGSSLAQVEASPAVHVGEHEPAATKVTS*
Ga0070714_10196892423300005435Agricultural SoilATSTVTVNVHGGNRLALRTLLGSARQQSFTYGPETIFLRWQGKVPTVVLPSELTVGDQITVRIRAPRASTLAQVESTAAVHIGEHEPPSTTITG*
Ga0070701_1090527013300005438Corn, Switchgrass And Miscanthus RhizospherePAGTSTLTVDVRGGNRRALRLVLGNARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPASTTITG*
Ga0070705_10175872413300005440Corn, Switchgrass And Miscanthus RhizospherePLYLFRGKLAAPAGSSTLTLDVRGGNRPALRLLVGQSGQQTFTYGPETIFLLWQGKVPSVISPSDLTVGEHVTIRIRAPRGSTLGQVESTPARHVGEHEPANTPVTS*
Ga0070700_10201360013300005441Corn, Switchgrass And Miscanthus RhizospherePNPPSKPLFLFRGTLAAPAGASSVTVNVRGGNRHALRLLLGSSAQQTFTFGPETIFLLWQGKVPSVIAPGQLTVGDRITVRIRAAKGSTLAQVEATAAARVAEHEPANAKVVG*
Ga0070708_10019479443300005445Corn, Switchgrass And Miscanthus RhizosphereARPAGIVSDRVTEPTPPSRPLYLFQGKLAAPAGTSSLTLDVRGGNRPALRLLVGQSGRQTFTYGPETIFLLWQGKVPSVISASQLTVGERVTVRIRAPRGATLSQVESTPARHVGEHEPANTALTS*
Ga0070706_10073754213300005467Corn, Switchgrass And Miscanthus RhizospherePAGIVSDRVTEPTPPNRPLYLFRGTLAAPAGTSTLTLDVRGGNRPALRLLVGQSGRQTFMYGPETIFLLWQGKVPSVISASQLTVGERVTVRIRAPRGATLSQVESTPARHVGEHEPANTALTS*
Ga0073909_1028910723300005526Surface SoilKPLYLFRGTLAGAAGSTSVTLNVRNGNRNALRLLLGQPAQQTFTYGPETIFLVWHGKVPTVITPAQLTVGDRVTLRVRASKGLTLAQVESTPAVRVAEHEPANAKVVG*
Ga0070679_10031084913300005530Corn RhizosphereDVTGGNHRALRLLLGQPASQTFAFGPETIFLHWQGKVPTVIAASQLQVGDRITVRIRAARGSSLAQVEATPAVHVGEHEPASSKLNG*
Ga0066697_1074248613300005540SoilTTAAGIVGDRGPSPSHANQPLYLFAGKLTAVGSNSITVDVKTGNRRALRLLIGQSSSETFTFDQNTTFLLWKGKVPSVILANQLTVGDRIVVRVRAAKGSTLAQVESAPAVRIAEHERAGS*
Ga0070695_10113778813300005545Corn, Switchgrass And Miscanthus RhizosphereAPWRATLAQVEARPASIVSDRVSEPTPPTRPLFLYRGKLAAPAGASSLTLDVRSGNRLALRTLIGQSSQQTFTYGPETIFLLWQGKVPTVISPSQLTVGERVTIRIRAPRGSTLSQVESTPARHVGEHEPANTSVTS*
Ga0068859_10178296913300005617Switchgrass RhizosphereGRLAAPAGTSTVTVDVRGGNRRALRLVLGNARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPASTTITG*
Ga0066903_10419099923300005764Tropical Forest SoilSTVTVNVHGGNRLALRALLGSAGQQSFTYGPETIFLLWQGKVPTVISPAQLTVGDQITVRIRAPRHSTLAQVESTPAVHIGEHEPPSTTITG*
Ga0066903_10686629113300005764Tropical Forest SoilSDRVAKPNPPALPLFLFRGKLAAPASTNTVTLRVHGGNRLALRTLLGSARLQTFTFGSETIFLRWQGKVPTVIAPTDLTLGDQITVRIRAPRGSTLAQVESTPAVHIGEHEPASTTITG*
Ga0075279_1007014423300005903Rice Paddy SoilLYRGRLVSGGDGSVTVDVRGGNRRGLRLLVDRGARQTFAAGQETIFLRWQGKVPTVISASDLKAGDRVTVRIRAAAHSTLEQVESSAAVHVGEHEPASTTMTS*
Ga0066658_1083576323300006794SoilDVRGGNRRALQLLLGNTRQQSFTFGPETIFLRWQGKVPTVISPVDLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPPSTTITG*
Ga0075425_10310985223300006854Populus RhizosphereLFKGTLAAPAGTSTLTVDVRGGNRRALRLVLGNARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPASTTITG*
Ga0075434_10133354023300006871Populus RhizosphereVSDRIAKPNRPTYPLFLFRGTLAAPAGTSTLTVDVRGGNRRALRLVLGNARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPASTTITG
Ga0075424_10264650323300006904Populus RhizosphereVLGNARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPASTTITG*
Ga0105243_1182868523300009148Miscanthus RhizosphereVAAPAGTSTVTVDVGGGNRRALRLLLGTARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRVTVRIRAPWRSTLAQVESTPAVHIGEHEPPTTTITG*
Ga0105242_1058470433300009176Miscanthus RhizosphereSQVESRPAGIVSDRGAKPNPPARPLFLFRGRVAAPAGTSTVTVDVGGGNRRALRLLPRTPRQQSFTYAPATIFLRWQGKVPTVISPADLTLGDRVTVRIRAPWRSTLAQVESTPAVHIGEHEPPTTTITG*
Ga0126374_1154101813300009792Tropical Forest SoilAGDWVTVNVRAPRTASLSEVEGKAAGVVADRGPNPTTASKPLFLLRGKLAAPAGTSTVTLDVKGGNRHGLRLLIGQSTQQSFAYGPETIFLRWQGKVPTVIAASDLKVGDQVTVRVRAAGGSSLAQVEATPAAHVGEHESAATTVTS*
Ga0126313_1006006543300009840Serpentine SoilGGKRRALRLVLGNARQQSFTYGPETIFLRWRGKVPTVISPTDLTLGDRITVRIRAPWRSTLAQVESTPAVHVGEHEPPTTTITG*
Ga0126305_1027571033300010036Serpentine SoilVESRPAGIVSDRVAKPNRPTYPLFLFRGRVAAPAGTSTLTVDVRGGNRRALRLVLGNGRQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWRSTLAQVESTPAVHVGEHEPPTTTITG*
Ga0134070_1025749213300010301Grasslands SoilRLAAAAGPTTVTVDVRGGNRRALRLLIGQPLQQSFTYGPETILLLWQGKVPTVISPAQLTVGDRITVRIRAPWGSSLSQVESTAAVHIGEHEPPNTTITG*
Ga0134064_1033619613300010325Grasslands SoilTQVESRPAGIVSDRGAKPNPPAYPLFLFRGKVAAPAGTSTLSVDVRGGNRRALRLLLGNTRQQSFTFGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPPSTTITG*
Ga0126379_1028599943300010366Tropical Forest SoilASASTVTVNVHGGNRHALRALLGSARQQSFTYGPETIFLRWQGKVPTVIAPTDLTVGDQITVRIRAPKQSTLAQVESTPAVHIGEHEPPSTTITG*
Ga0126379_1215875113300010366Tropical Forest SoilHGLRLLIGQSTQQSFAYGAETIFLRWQGKVPTVVSAADLTVGDQVTVRVRAAKSSSLAQVEATPAVHVGEHEPAATKVTS*
Ga0126383_1300346713300010398Tropical Forest SoilSEVEGKAAGVVADRGPNPTTASKPLFLFRGKLAAPAGTSAVTLDVKGGNRHGLRLLIGQNTQQSFAYGAETIFLRWQGKVPTVIAASDLKVGDQVTVRVRAPKGSSLAQVEATPAAHVGEHEPAATRVTS*
Ga0124850_108652313300010863Tropical Forest SoilRAPWRASLTQVEARPAGVVSDRLAKPNPPARPLFLFRGKLAVPASSTSVTVNVHGGNRLALRALLGSAGQQSFTYGPETIFLLWQGKVPTVISPAQLTVGDQITVRIRAPRHSTLAQVESTPAVHIGEHEPPSTTITG*
Ga0120174_116866213300012008PermafrostTTAAGASSVTLDVHSGNRPALKLLLGQSAQQTFTYGPETIFLVWHGKVPTVITPAQLTVGDRVTLRTRASKGLTLAQVEATPATRVAEHEPATAKVVG*
Ga0120152_104370633300012011PermafrostVRVPAPWNASLTEIESHPAGIVADRGPNPNPPNKPLYLFRGKLTAAAGTNTVTLDVRGGNRPALRLLVGQSSQQSFTYGPETIFLLWQGKVPTVISPTQLTVGDRITVRIRAPWHSTLAQVESTAAAHIGEHEPPSTAVTS*
Ga0137369_1096849613300012355Vadose Zone SoilHPPNQPLYLFRGKLAAAAGTSTVTVDVRGGNRRALRLLIGQSLQQSFTYGPETIFLLWQGKVPSVISASQLTVGDRITVRIRAPKGSTLAQVESTPARHIGEHEPPSTAVTS*
Ga0137375_1111558713300012360Vadose Zone SoilPNQPLYLFRGKLAAAAGTSTVTVDVRGGNRRALRLLIGQSLQQSFTYGPETIFLLWQGKVPSVISASQLTVGDRITVRIRAPKGSTLAQVESAPARHIGEHEPPSTAVTS*
Ga0134038_106846813300012382Grasslands SoilQVESRPAGIVSDRVAKPNRPTYPLFLFRGRVAAPAGTSTLSVDVCGGNRRALRLLLGNTRQQSFTFGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPPTTTITG*
Ga0164301_1144174523300012960SoilSHPAGIVADRVKEPTPPGKPLYLFRGTLASPAGACSVTLDVRGGNRHALRLLIGAGGQPTFSFGQDTIFLLWQGKVPTVITPAQLKVGDRVTVRVRAAKASTLSQVESTPAARVAENETANAK*
Ga0126369_1356946513300012971Tropical Forest SoilASASTVTVNVHGGNRHALRALLGSARQQSFTYGPETIFLRWQGKVPTVISPTDLTVGDQITVRIRAPKQSTLAQVESTPAVHIGEHEPPSTTITG*
Ga0157378_1198824713300013297Miscanthus RhizosphereLRLVLGNARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPASTTITG*
Ga0157375_1277096413300013308Miscanthus RhizosphereLFKGRLAAPAGTSTVTVDVRGGNRRALRLVLGNARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWRSTLAQVESTPAVHVGEHEPASTTITG*
Ga0120172_105933713300013765PermafrostPAGIVGARGPNPNPPNKPLYLFRGKLTAAAGTNTVTLGVRGGNRPALRLLVGQSSQQSFTYGPETIFLLWQGKVPTVISPTQLTVGDRITVRIRAPWHSTLAQVESTAAAHIGEHEPPSTAVTS*
Ga0134075_1047559123300014154Grasslands SoilAGTSTLSVDVRGGNRRALRLLLGNTRQQSFTFGPETIFLRWQGKVPTVISPVDLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPPSTTITG*
Ga0163163_1092311123300014325Switchgrass RhizosphereSLSQVESRPAGIVSDRVAKPNRPTYPLFLFRGTVAAPAGTSTLAVDVRGGNRRALRLVLGNARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWRSSLAQVESTPAVHVGEHEPASTTITG*
Ga0120171_110577213300014827PermafrostGIVAARAPNPNPPKKPLYLFRGKLTAAAGTNTVTLGVRGGNRPALRLLVGQSSQQSFTYGPETIFLLWQGKVPTVISPTQLTVGDRITVRIRAPRHSTLAQVESTAAAHIGEHEPPSTAVTS*
Ga0132258_1119209213300015371Arabidopsis RhizosphereLLLGGAQQQSFAYGQETIFLLWKGKVPTVVSPAQLTVGDRITVRIRAQRGATLSQVESTPARHVGEHEPATTSITG*
Ga0132256_10196043813300015372Arabidopsis RhizosphereRGTLASPAGTNTVALNVRGGNRLALRLLIGAGAQQTFTFGQDTIFLLWQGKVPTVITPAQLKVGDRVTVRVRATRGLTLAQVESTPAARVAEHEPANVK*
Ga0132256_10204180613300015372Arabidopsis RhizosphereLAAPAGTSTVTLDVKGGNRHGLRLLIGQGTQQSFAYGPETIFLRWQGKMPTVIAASDLKVGDRVTVRVRAAKGSSLSQVEATPAAHVGEHEPAATKITS*
Ga0132257_10252551123300015373Arabidopsis RhizosphereAGASSLTLDVRGGNRLALRTLLGQSSQQTFTYGPETIFLLWQGKVPTVISPSQLTVGERVTIRIRAPRRSTLSQVESTPARHVGEHEPANTSVTS*
Ga0132255_10425663513300015374Arabidopsis RhizosphereDRGPNPTTASKPLFLFRGKLAAPAGTSSVTLDVNSGNRHGLRLLIGQSTQQSFAYGPETIFLRWQGKVPTVIAASDLKVGDRVTVRVRAAKGSSLSQVEGTPAAHVGEHEPAATKITS*
Ga0182038_1212306413300016445SoilSAQQQSFAYGPETIFLRWLGKVPTVISPADLTVGDQITVRIRAPRTSTLAQVESTLAVHIGEHEPPNTTITG
Ga0134112_1039573913300017656Grasslands SoilIVADRGAKPNPPAYPLFLFRGRVAAPAGTSTLSVDVRGGNRRALRLLLGNTRQQSFTFGPETIFLRWQGKVPTVISPVDLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPPSTTIT
Ga0134083_1041945613300017659Grasslands SoilGIVADRVAKPNRPTYPLFLFRGNVAAPAATSTLSVDVHGGNRRALRLLLGNTRGQTFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPPTTTITG
Ga0184605_1002503513300018027Groundwater SedimentLAAPAGTSTVTVDVRGGNRRALRLLIGQSLRQSFTYGPETIFLLWQGKVPTVISPAQLTVGDRITVRIRAPQGSTLSQVESTPAVHIGEHEPPSTAITG
Ga0184619_1016881533300018061Groundwater SedimentAASAGTSTVTVNVRGGNHRALRLLIGQSLQQSFAYGPETIFLLWQGKVPTVISPAQLTVGDRITVRIRAPQGSTLSQVESTPAVHIGEHEPPSTAITG
Ga0184618_1050950313300018071Groundwater SedimentNVRGGNHRALRLLIGQSLQQSFAYGPETIFLLWQGKVPTVISPAQLTAGDRITVRIRAPQGSTLSQVESTPAVHIGEHEPPSTAITG
Ga0066655_1048330613300018431Grasslands SoilSRPAGIVADRGVKPNPPTYPLFLFRGRVAAPAGTSTLSVDVRGGNRRALRLLLGNTRQQSFTFGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPPSTTITG
Ga0222622_1129998323300022756Groundwater SedimentHPAGIVADRVKEPTPPGKPLYLFRGTLASPAGASSVTLNVRGGNRHALRLLIGASNQQTFTFGQDTIFLLWQGKVPTVISPAQLKVDDRVTVRIRAAKGSTLAQVESTPAARVAEHEPANAT
Ga0210142_110609213300025552Natural And Restored WetlandsGRPAQPLYLFRGRIAAVASGAVTVDTRGGNRRALRLLIGQDARQTFATGQETIFLLWQGKVPTVIAAAQLKVGDAVVVRVRAAARSSLAQVEATPAVHVGEHEPKTTTVTS
Ga0207680_1032898823300025903Switchgrass RhizosphereSVTLDVRGGNRHALRLLIGSGRQQTFSFGQDTIFLLWQGKVPTVITAAQLKVGDRVAVRIRAAKGSTLSQVESTPAARVAEHEPANAK
Ga0207684_1017758713300025910Corn, Switchgrass And Miscanthus RhizosphereGNRPALRLVVGQSGRQTFTYGPETIFLLWQGKVPSVISASQLTVGERVTVRIRAPRGATLSQVESTPARHVGEHEPANTALTS
Ga0207693_1141886313300025915Corn, Switchgrass And Miscanthus RhizosphereLFLFRGKLVAPASTTSVTLKVRGGNRLALRTLLGSARLQSFTYGPETIFLRWQGKVPTVIAPTDLTLGDRVTVRIRAPRGSTLAQVESTPAVHVGEHEPANTTITG
Ga0207646_1140644813300025922Corn, Switchgrass And Miscanthus RhizosphereAQIEARPAAIVSDRGAQPNPPNRPLYLFRGKLAAPAGSSTLTLDVRGGNRLALRLLLGQPAQQTFTYGPETIFLLWQGKVPSVISASQLTVGERVTVRIRALRGATLSQVESTPARHVGEHEPANTALTS
Ga0207687_1073922913300025927Miscanthus RhizosphereGKPLYLLRGTLASPAGANSVTLDVRGGNRHALRLLIGSGRQQTFSFGQDTIFLLWQGKVPTVITAAQLKVGDRVAVRIRAAKGSTLSQVESTPAARVAEHEPANAK
Ga0207644_1110706423300025931Switchgrass RhizosphereLFKGRLAAPAGTNTVTVDVHGGNRRALRLVLGNARQQSFTYGPETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWRSTLAQVESTPAVHVGEHEPASTTITG
Ga0207665_1144327023300025939Corn, Switchgrass And Miscanthus RhizosphereAGTSTVTLDVRGGNRLALRLLLGSGRQQSFTYGPETIFLRWQGKVPTVIAPTDLTLGDRVTVRIRAPRGSTLTQVESTPAVHIGEHEPPSTAITG
Ga0207679_1158767523300025945Corn RhizosphereTPPGKPLYLFRGTLASPAGANSVTLDVRGGNRHALRLLIGSGRQQTFSFGQDTIFLLWQGKVPTVITPAQLKVGDRVAVRIRAAKGSTLSQVESTPAARVAEHEPANAK
Ga0208140_102200023300026021Rice Paddy SoilAQPLYLFRGRLASVGSAGVTVDVRGGNRHALRLLAGQSSTQTFATGDQTIFLLWQGRVPSVIALSQLKVGDRIVVRVRAARGSTLAQVESTPAVHVGDREPANASS
Ga0209265_123704413300026308SoilVADRGVKPNPPTYPLFLFRGRVAAPAGTSTLSVDVRGGNRRALRLLLGNTRQQSFTFGPETIFLRWQGKVPTVISPVDLTLGDRITVRIRAPWHSTLAQVESTPAVHVGEHEPPSTTITG
Ga0209811_1021254123300027821Surface SoilPRAATLAEVESHPAGIVADRVKEPTPPGKPLYLFRGTLASPAGAGSVTLDVRGGNRHALRLLIGAGGQQTFSFGQDTIFLLWQGKVPTVIDASKLTIGDRIVVRIRADKGSSLAQVTSTPANKIADREPPQAR
Ga0209811_1029861813300027821Surface SoilFRGTLAGAAGSTSVTLNVRNGNRNALRLLLGQPAQQTFTYGPETIFLVWHGKVPTVITSAQLTVGDRVTLRVRASKGLTLAQVESTPAVRVAEHEPANAKVVG
Ga0209590_1010266013300027882Vadose Zone SoilDRGPNPNPPDKPLYLFRGKLAAPAGPSTVTIDVRGGNRRALRLLIGQSLQQSFTYGPATVFLLWQGKVPTVISASQLTVGDRITVRIRAPKGSTLSQVESTPAVHIGEHEPPNTTITG
Ga0307297_1040381913300028754SoilAGANSVTLNVRGGNRHALRLLIGASNQQTFTFGQDTIFLLWQGKVPTVISPAQLKVGDRVTVRIRAAKGSTLAQVESTPAARVAEHEPANAT
Ga0307280_1027574523300028768SoilLIGQSLQQSFAYGPETIFLLWQGKVPTVISPAQLTVGDRITVRIRAPQGSTLSQVESTPAVHIGEHEPPSTAITG
Ga0307288_1024923623300028778SoilVRAPRAATLAEVESHPAGIVADRVKEPTPPGKPLYLFRGTLASPAGASSVTLNVRGGNRHALRLLIGASNQQTFTFGQDTIFLLWQGKVPTVISPAQLKVGDRVTVRIRAAKGSTLAQVESTPAARVAEHEPANAT
Ga0307323_1037717413300028787SoilTLSQIESRPAGIVADRAVKPNPPNKPLYLFRGRLAASAGTSTVTVNVRGGNHRALRLLIGQSLQQSFAYGPETIFLLWQGKVPTVISPAQLTVGDRITVRIRAPQGSTLSHVESTPAVHIGEHEPPSTAITG
Ga0265338_1044278013300028800RhizosphereGDLGSSPNPPDQPLYLFRGTIASTGATSVTIDTRAGNGRALRLLIGQSAQQTFTTGPETIFLLWQGKVPTVISASQLKAGDRVVVRIRAAARSTLAQVESTPAVHVGEREPAATAVTS
Ga0307296_1032664223300028819SoilADRVKEPTPPGKPLYLFRGTLASPAGANSVTLNVRGGNRHALRLLIGASNQQTFTFGQDTIFLLWQGKVPTVISPAQLKVGDRVTVRIRAAKGSTLAQVESTPAARVAEHEPANAT
Ga0307308_1006947043300028884SoilRGGNHRALRLLIGQSLQQSFTYGPETIFLLWQGKVPTVISPAQLTVGDRITVRIRAPQGSTLSQVESTPAVHIGEHEPPSTAITG
Ga0307304_1047394113300028885SoilGRLAASAGTSTVTVNVRGGNHRALRLLIGQSLQQSFAYGPETIFLLWQGKVPTVISPAQLTVGDRITVRIRAPQGSTLSQVESTPAVHIGEHEPPSTAITG
Ga0247826_1067954923300030336SoilKEPNPPSQPLYLFRGKLAAAAGTTTVTVDVRGGNRHALRLLLGQARQQSFTYGPETIFLLWQGKVPTVISPSQLTVGDRITVRIRAPRGATLSQVESTPARHIGEHEPPSTSITS
Ga0308206_115751313300030903SoilVGDWVTVNVRAARNASLTEIESRPAGIVGDRGPNPNPATKPLYLFRGKLAAAAGSSSVTLNVGGGNRNALKLLLGQSAQQTFTYGPETIFLVWRGKVPTVITPAQLTVGDRVTLRIRAAKGLTLAQV
Ga0318564_1012089633300031831SoilVVVNVRAPWRASLAQIESQPAGVVSDRVAKPNPPAMPLFLFRGRLAAPAGTSTVTVNVHGGNRLALRALLGSAQQQSFAYGPETIFLRWLGKVPTVISPADLTVGDQITVRIRAPRTSTLAQVESTLAVHIGEHEPPNTTITG
Ga0310917_1078163323300031833SoilDRGPNPTPASKPLFLFRGKLAAPAGTSSVTLDVRGGNRHGLRLLIGQSTQQSFAFGPETIFLRWQGKVPSVIAASDLQVGDQVTVRVRAAKGSSLAQVEATSAVHVGEHEPAVTKVTS
Ga0318511_1026775523300031845SoilRALLGSAQQQSFAYGPETIFLRWLGKVPTVISPADLTVGDQITVRIRAPRTSTLAQVESTLAVHIGEHEPPNTTITG
Ga0318551_1029725533300031896SoilLGSAQQQSFAYGPETIFLRWLGKVPTVISPADLTVGDQITVRIRAPRTSTLAQVESTLAVHIGEHEPPNTTITG
Ga0308175_10199842113300031938SoilAPYDASLAQVESRPAGIVADRVAKPNRPAYPLFLFRGTVAAPAGTNTLTVDVRGGNRRALRLVLGTGRQQSFTYGLETIFLRWQGKVPTVISPADLTLGDRITVRIRAPWRSTLAQVESTPAVHVGEHEPPTTTITG
Ga0318562_1009470513300032008SoilVADRGPNPTPASKPLFLFRGKLAAPAGTSSVTLDVRGGNRHGLRLLIGQSTQQSFAFGPETIFLRWQGKVPSVIAASDLQVGDQVTVRVRAAKGSSLAQVEATSAVHVGEHEPAVTKVTS
Ga0318558_1052349623300032044SoilLFRGKLAAPAGTSSVTLDVRGGNRHGLRLLIGQSTQQSFAFGPETIFLRWQGKVPSVIAASDLQVGDQVTVRVRAAKGSSLAQVEATSAVHVGEHEPAVTKVTS
Ga0318553_1047635413300032068SoilNDCCCALRALLGSAQQQSFAYGPETIFLRWLGKVPTVISPADLTVGDQITVRIRAPRTSTLAQVESTLAVHIGEHEPPNTTITG
Ga0306924_1207466613300032076SoilVVADRGPNPAPASKPLFLFRGKLAAPAGTSSVTLDVRGGNRHGLRLLIGQSTQQSFAFGPETIFLRWQGKVPSVIAASDLQVGDQVTVRVRAAKGSSLAQVEATSAVHVGEHEPAVTKVT
Ga0307471_10350791823300032180Hardwood Forest SoilPAGIVSDRVTKPNPPALPLFLFRGKLAEPAGTSSIALKVRGGNRLALRTLLGSARQQSFTYGPETIFLRWQGKVPTVIAPTDLTLGDRVTVRIRAPRGSTLAQVESTPAVHIGEHEPASTTITG
Ga0306920_10237791813300032261SoilADRGPNPTPASKPLFLFRGKLAAPAGTSSVTLDVRGGNRHGLRLLIGQSTQQSFAFGPETIFLRWQGKVPSVIAASDLQVGDQVTVRVRAAKGSSLAQVEATSAVHVGEHEPAVTKVTS
Ga0310914_1155416813300033289SoilVNVHGGNRLALRALLGSAQQQSFAYGPETIFLRWLGKVPTVISPADLTVGDQITVRIRAPRTSTLAQVESTLAVHIGEHEPPNTTITG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.