Metagenome Family F099036

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099036
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	42 residues
Representative Sequence	PSVEAKGPQEEDMQNSALAPYLQRVEASASTDWSESAAEPKH
Number of Associated Samples	85
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.96 %
% of genes near scaffold ends (potentially truncated)	98.06 %
% of genes from short scaffolds (< 2000 bps)	87.38 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.903 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.126 % of family members)
Environment Ontology (ENVO)	Unclassified (45.631 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.485 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.71% β-sheet: 0.00% Coil/Unstructured: 74.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF12697	Abhydrolase_6	18.45
PF13467	RHH_4	6.80
PF13586	DDE_Tnp_1_2	1.94
PF03401	TctC	0.97
PF00436	SSB	0.97
PF04780	DUF629	0.97
PF00891	Methyltransf_2	0.97
PF03330	DPBB_1	0.97
PF07690	MFS_1	0.97
PF07883	Cupin_2	0.97
PF13767	DUF4168	0.97
PF04909	Amidohydro_2	0.97
PF13560	HTH_31	0.97
PF01035	DNA_binding_1	0.97
PF13683	rve_3	0.97
PF04519	Bactofilin	0.97
PF02738	MoCoBD_1	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.97
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.97
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.97
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.97
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.97
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.90 %
Unclassified	root	N/A	30.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.90 %
Unclassified	root	N/A	30.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.90 %
Unclassified	root	N/A	30.10 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.11 %
Unclassified	root	N/A	30.10 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	60.19 %
Unclassified	root	N/A	30.10 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.10 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.71 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.77 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.94 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.94 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_F5ZO29U01AHJRJ	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
2170459024\|GZTSFBX01AMNI1	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1006892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1610	Open in IMG/M
3300000956\|JGI10216J12902_103412440	Not Available	522	Open in IMG/M
3300002906\|JGI25614J43888_10191663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300005332\|Ga0066388_106697837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300005445\|Ga0070708_100083030	All Organisms → cellular organisms → Bacteria	2903	Open in IMG/M
3300005447\|Ga0066689_10231946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300005467\|Ga0070706_102102898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300005471\|Ga0070698_102151431	Not Available	511	Open in IMG/M
3300005553\|Ga0066695_10422774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300005713\|Ga0066905_101788974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300005764\|Ga0066903_105245098	Not Available	685	Open in IMG/M
3300006032\|Ga0066696_10836978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300006794\|Ga0066658_10408036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	737	Open in IMG/M
3300006853\|Ga0075420_101633576	Not Available	552	Open in IMG/M
3300010047\|Ga0126382_11973393	Not Available	554	Open in IMG/M
3300010301\|Ga0134070_10302359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300010301\|Ga0134070_10428136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300010359\|Ga0126376_11620841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300010360\|Ga0126372_12306374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300010361\|Ga0126378_10465385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1379	Open in IMG/M
3300010376\|Ga0126381_101791401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	886	Open in IMG/M
3300010376\|Ga0126381_101906517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	857	Open in IMG/M
3300010398\|Ga0126383_10840436	Not Available	1002	Open in IMG/M
3300012204\|Ga0137374_10227707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1582	Open in IMG/M
3300012205\|Ga0137362_11514762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300012209\|Ga0137379_10146663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2267	Open in IMG/M
3300012211\|Ga0137377_10930221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	801	Open in IMG/M
3300012211\|Ga0137377_11177229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300012350\|Ga0137372_10450847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	965	Open in IMG/M
3300012350\|Ga0137372_10464760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300012353\|Ga0137367_10244768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1290	Open in IMG/M
3300012353\|Ga0137367_10716591	Not Available	696	Open in IMG/M
3300012355\|Ga0137369_10518806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	839	Open in IMG/M
3300012356\|Ga0137371_10491395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	948	Open in IMG/M
3300012582\|Ga0137358_10484300	Not Available	834	Open in IMG/M
3300012923\|Ga0137359_10705321	Not Available	879	Open in IMG/M
3300012948\|Ga0126375_10771185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	758	Open in IMG/M
3300012948\|Ga0126375_11881963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	525	Open in IMG/M
3300012971\|Ga0126369_11562946	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300012971\|Ga0126369_11679329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300012971\|Ga0126369_13010910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300016270\|Ga0182036_11605968	Not Available	548	Open in IMG/M
3300016319\|Ga0182033_10758187	Not Available	853	Open in IMG/M
3300016341\|Ga0182035_11747130	Not Available	563	Open in IMG/M
3300016357\|Ga0182032_11498106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300016357\|Ga0182032_11666497	Not Available	556	Open in IMG/M
3300016371\|Ga0182034_10781265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300016371\|Ga0182034_11412095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300016445\|Ga0182038_10099089	All Organisms → cellular organisms → Bacteria	2112	Open in IMG/M
3300017657\|Ga0134074_1283298	Not Available	601	Open in IMG/M
3300018027\|Ga0184605_10352990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300018433\|Ga0066667_10452216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1049	Open in IMG/M
3300020579\|Ga0210407_10222333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1469	Open in IMG/M
3300021560\|Ga0126371_12912823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300025916\|Ga0207663_11092514	Not Available	641	Open in IMG/M
3300025922\|Ga0207646_10565097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1022	Open in IMG/M
3300025928\|Ga0207700_11291802	Not Available	650	Open in IMG/M
3300025939\|Ga0207665_10284269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1232	Open in IMG/M
3300026306\|Ga0209468_1068370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1193	Open in IMG/M
3300026310\|Ga0209239_1135190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1004	Open in IMG/M
3300028878\|Ga0307278_10213536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	859	Open in IMG/M
3300028878\|Ga0307278_10456302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300031545\|Ga0318541_10474794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M
3300031573\|Ga0310915_10722226	Not Available	703	Open in IMG/M
3300031668\|Ga0318542_10092655	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300031713\|Ga0318496_10074398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1793	Open in IMG/M
3300031719\|Ga0306917_10879327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300031724\|Ga0318500_10145540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1111	Open in IMG/M
3300031736\|Ga0318501_10028742	All Organisms → cellular organisms → Bacteria → Proteobacteria	2435	Open in IMG/M
3300031736\|Ga0318501_10176022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1111	Open in IMG/M
3300031744\|Ga0306918_11057886	Not Available	629	Open in IMG/M
3300031777\|Ga0318543_10563537	Not Available	510	Open in IMG/M
3300031778\|Ga0318498_10557055	Not Available	503	Open in IMG/M
3300031779\|Ga0318566_10424605	Not Available	653	Open in IMG/M
3300031781\|Ga0318547_10650335	Not Available	654	Open in IMG/M
3300031782\|Ga0318552_10000741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10492	Open in IMG/M
3300031782\|Ga0318552_10323732	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300031796\|Ga0318576_10026951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2343	Open in IMG/M
3300031796\|Ga0318576_10321016	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300031833\|Ga0310917_10205814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1316	Open in IMG/M
3300031835\|Ga0318517_10323043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300031845\|Ga0318511_10618672	Not Available	506	Open in IMG/M
3300031846\|Ga0318512_10027920	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300031879\|Ga0306919_10119052	All Organisms → cellular organisms → Bacteria → Proteobacteria	1887	Open in IMG/M
3300031879\|Ga0306919_10535063	Not Available	904	Open in IMG/M
3300031880\|Ga0318544_10019153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2277	Open in IMG/M
3300031890\|Ga0306925_10978796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300031910\|Ga0306923_10750515	Not Available	1082	Open in IMG/M
3300031946\|Ga0310910_11332326	Not Available	554	Open in IMG/M
3300031947\|Ga0310909_10002294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11709	Open in IMG/M
3300031947\|Ga0310909_10799840	Not Available	779	Open in IMG/M
3300031954\|Ga0306926_10091706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3713	Open in IMG/M
3300031954\|Ga0306926_10191764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2536	Open in IMG/M
3300032025\|Ga0318507_10124947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1088	Open in IMG/M
3300032035\|Ga0310911_10612660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300032064\|Ga0318510_10337546	Not Available	633	Open in IMG/M
3300032066\|Ga0318514_10523170	Not Available	631	Open in IMG/M
3300032068\|Ga0318553_10514297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300032091\|Ga0318577_10023213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2604	Open in IMG/M
3300032261\|Ga0306920_102661145	Not Available	684	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.03%
Host-Associated	Host-Associated	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.06%
Aquatic	Environmental → Aquatic	0.97%
Plants	Host-Associated → Plants	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.06%
Sediment	Environmental → Aquatic → Sediment	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.35%
Loam	Environmental → Terrestrial → Soil → Loam	9.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_4499060	2040502001	Soil	LSIDAKGPEKEDMQSSALAPYLQRVEGSASTDWSE
FD1_03645600	2170459024	Grass Soil	KGPPEEDTQSSALAPYMRRVEPSAATDWSESKVEPKH
AP72_2010_repI_A100DRAFT_10068921	3300000837	Forest Soil	AKGPQQEDMQNSALAPYLQRVEASASTEWSESAAEPKH*
JGI10216J12902_1034124401	3300000956	Soil	VDAKGPQEEDLQSSALAPYLHRAEASASTNWSESTAEPKH*
JGI25614J43888_101916633	3300002906	Grasslands Soil	TDLPSVEAKGPQEQEEDMQNSALAPYLQRVEAPASTDWSESAAEPKH*
Ga0066388_1066978371	3300005332	Tropical Forest Soil	RVENPTDQPSIHANGPQEEDMPSSALAPYLHRVEPSASTEWSESTVEPKH*
Ga0070708_1000830301	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GSQEEDMQNSALAPYLQRVEAPASTDWSESTIEPKHAEL*
Ga0066689_102319462	3300005447	Soil	PSVEAKGPQEEDMQNSALAPYLQRVEAPASTDWSESAAEPKH*
Ga0070706_1021028981	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LVEAKGPQEEDIQNSALAPYLQRVEASASTDWPESAAEPNH*
Ga0070698_1021514312	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VEAKGSQEEDMQNSALAPYLQRVEAPASTDWSESTIEPKHAEL*
Ga0066695_104227741	3300005553	Soil	PQEEDMQNSALAPYLQRVEASASTDLSESAAEPKH*
Ga0066905_1017889741	3300005713	Tropical Forest Soil	NPTDLPAVDAKGPQEEDMRGSALAPYLQRAEASASTEWSESTAEPKH*
Ga0066903_1052450981	3300005764	Tropical Forest Soil	NPTDLPSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSESAAEPKH*
Ga0066696_108369781	3300006032	Soil	AKGPEKEDKQSSALSPYMQRVEEPASTEWSESAIEPKH*
Ga0066658_104080361	3300006794	Soil	KGPQETDMRSSALAPYLQRAEASGSPDWSESAVEPKH*
Ga0075420_1016335761	3300006853	Populus Rhizosphere	PPVDAKGPRDEDMQSSALAPYLQRVEPSASSEWSESTVEPKH*
Ga0126382_119733931	3300010047	Tropical Forest Soil	ENPTDLPSVEAKGPQQEDMQNSALAPYLQRVEASASTEWSESAAEPKH*
Ga0134070_103023592	3300010301	Grasslands Soil	KGPQEEDMQNSALAPYLQRVEAPASTDWSESAAEPKH*
Ga0134070_104281361	3300010301	Grasslands Soil	VENPTDELLVDAKGPQETDMRSSALAPYLQRAEASGSPDWSESAIEPKH*
Ga0126376_116208412	3300010359	Tropical Forest Soil	EQPSIDAKGAREEDMQSSALAPYLHRVEPSASTEWSESTVEPKH*
Ga0126372_123063741	3300010360	Tropical Forest Soil	ENPTDAPLVDAKGPQDADMRSSALAPYLQTVEASESPDWSEPKH*
Ga0126378_104653853	3300010361	Tropical Forest Soil	DLPSVEAKGPQEEAMQNSALAPYLQRVEASASTEWSESAAQPKH*
Ga0126381_1017914011	3300010376	Tropical Forest Soil	RRVENPTDQPSVGAKGPQEEDMQGSALASYLHRVEPSASTDWSESTVEPKH*
Ga0126381_1019065171	3300010376	Tropical Forest Soil	PTDSPSVDAKGPQEDLQTSALAPYLRQAPAAADWSEATAEPKH*
Ga0126383_108404363	3300010398	Tropical Forest Soil	ENPTDLPSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSESAAEPKH*
Ga0137374_102277071	3300012204	Vadose Zone Soil	PTDAPSVDAKGPRDEDMQSSALAPYLQRVEPSASPEWSESTVEPKH*
Ga0137362_115147622	3300012205	Vadose Zone Soil	TDLPSVEAKGPQEEDMQNSALAPYLQRVEAPASTDWSESAAEPKH*
Ga0137379_101466633	3300012209	Vadose Zone Soil	VDAKGPQEEDMRSSALAPYLQRAEASASTDWSESTAEPKH*
Ga0137377_109302211	3300012211	Vadose Zone Soil	EPLVDAKGPQETDMRSSALAPYLQRAEASGSPDWSESAVEPKH*
Ga0137377_111772292	3300012211	Vadose Zone Soil	VDAKGPRDEDVRSSALAPYLQRGEPSASTEWSDSTVEPKH*
Ga0137372_104508471	3300012350	Vadose Zone Soil	RVENPTDAPSVDAKGPRDEDMQSSALAPYLQRVEPSASSEWSESTVEPKH*
Ga0137372_104647602	3300012350	Vadose Zone Soil	AKGPQEEDMRSSALAPYLQRVEASASTEWSESTAEPKH*
Ga0137367_102447681	3300012353	Vadose Zone Soil	AKGSRDEEMQSSALAPYLQRAEGSASTEWSESTVEPKH*
Ga0137367_107165912	3300012353	Vadose Zone Soil	SVDAKGPRDEDVRSSALAPYLQRVEPSASSEWSESAVEPQH*
Ga0137369_105188062	3300012355	Vadose Zone Soil	ENPTDAPSVDAKGPRDENMQSSALAPYLQRVEPSASSEWSESAVEPKH*
Ga0137371_104913951	3300012356	Vadose Zone Soil	PSVEAKGPQEEDMQNSALAPYLQRVEASASTDWSESAAEPKH*
Ga0137358_104843001	3300012582	Vadose Zone Soil	GPKKEDMQSSVLAPYLQRVEEPGSTEWSDSAVEPKH*
Ga0137359_107053211	3300012923	Vadose Zone Soil	AKGPKKEDMQSSVLAPYLQRVEEPGSTEWSDSAVEPKH*
Ga0126375_107711852	3300012948	Tropical Forest Soil	VENPTDLPSVEAKGPQQEDMQNSVLAPYLQRVEASASTDWSESAAEPNH*
Ga0126375_118819632	3300012948	Tropical Forest Soil	KGPEKEDMQGSALAPYLERVKESASTEWSESTVESKY*
Ga0126369_115629462	3300012971	Tropical Forest Soil	DQPSVGAKGPQEEDVQSSALASYLQRVETSASTDWSESTVEPKH*
Ga0126369_116793292	3300012971	Tropical Forest Soil	VENPTEQPPIDAKGAREEDVQSSALAPYLHRVEPSASTEWSESTVEPKH*
Ga0126369_130109101	3300012971	Tropical Forest Soil	SVEAKGPQEEDMQNSALAPYLQRVEASASTDWPESAAEPKH*
Ga0182036_116059682	3300016270	Soil	PSVEAKGPQEEDMQNSALAPYLQRDEASASSDWSESAAEPKH
Ga0182033_107581874	3300016319	Soil	DAPSVDDKGPQEEDIQSSALAPYLHRVEASASTEWSESTVEPRH
Ga0182035_117471301	3300016341	Soil	GPQEEDMQNSALAPYLQRVEAPASADWSESAAEPKH
Ga0182032_100078827	3300016357	Soil	RRVENPMDLSSPADAKRSQKVDRENSALAPYLQRVEDSASTEWSEATVEPKH
Ga0182032_114981061	3300016357	Soil	NPMDAPSIDAKGPQEEDVRSSALAPYLQRVEASGSTDWSESTVEPKH
Ga0182032_116664971	3300016357	Soil	TDLPSVEAKGPQEEDIQNSALAPYLQRDEASASSDWSESAAEPKH
Ga0182034_107812652	3300016371	Soil	VENPTDLPSVEAKGPQEEDMQNSALAPYLQRVEASASTDWA
Ga0182034_114120951	3300016371	Soil	QPSAGAKGPQEEDMQGSALASYLHRVEPSASTDWSESTVEPKH
Ga0182038_100990891	3300016445	Soil	KGPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0134074_12832981	3300017657	Grasslands Soil	KSPQEEDMQRSALAPYLQRVETSASTEWSESTVEPKH
Ga0184605_103529901	3300018027	Groundwater Sediment	KDPQKEDMQSSALAPYLQRVEGSASTEWSESTVEPKH
Ga0066667_104522161	3300018433	Grasslands Soil	TRRIENPTEPPSVDAKGPRDEGVRSSALAPYLQRVEPSASTEWSDSTVEPKH
Ga0210407_102223331	3300020579	Soil	PSVEAKGPPEEDTQSSALAPYMRRVEPSAATDWSESKVEPKH
Ga0126371_129128231	3300021560	Tropical Forest Soil	AKGPQEEDMRSSALAPYLQRAEASASTEWSESTAEPKH
Ga0207663_110925141	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	NPTDPSSIGAKGPQKQDMPSSALAPYLQRVEESASTEWSDSAVEPKH
Ga0207646_105650972	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	IDAKGPQEEDMPSSALAPYLHRVEPSASSEWSESTVEPKH
Ga0207700_112918021	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LPSVDANGPRDEDMHSSALTPYLQRVEASGATDWSESAAEPKH
Ga0207665_102842694	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	ENPTEPSSSVDAKGPQKKDMQSSALAPYLQRAEGSASTEWSESTVEPKH
Ga0209468_10683701	3300026306	Soil	LPSVEAKGPQEEDMQNSALAPYLQRVEASASTDWSESAAEPKH
Ga0209239_11351902	3300026310	Grasslands Soil	VENPTDAPSVDAKGPRDEDVRSSALAPYLQRAEPSASTEWSDSTVEPKH
Ga0307278_102135361	3300028878	Soil	DAKGPRDEDMQSSALAPYLQRVEPSASSEWSESTVEPKH
Ga0307278_104563022	3300028878	Soil	GPRDEDMQSSALAPYLQRVEPSVSGEWSESTVEPKH
Ga0318541_104747942	3300031545	Soil	IGAKGPQEEDMQSSALASYLHRVEPSASTDWSESTVEPKH
Ga0310915_107222261	3300031573	Soil	SVEAKGPQEEDMQNSALAPYLQRDEASASSDWSESAAEPKH
Ga0318542_100926551	3300031668	Soil	ENPTDLPSVEAKGPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0318496_100743984	3300031713	Soil	PTDLPSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSEVGG
Ga0306917_108793271	3300031719	Soil	TDLPSVEAKGPQEEDMQNSALAPYLQRVEASASTDWPE
Ga0318500_101455403	3300031724	Soil	LPSVEAKGPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0318501_100287421	3300031736	Soil	VEAEGPQEEGMQDSALAPYLQRAEASASTEWSESAAEPKH
Ga0318501_101760223	3300031736	Soil	PSVEAKGPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0306918_110578862	3300031744	Soil	VENPTDLPSVEAQGPKEEDMQNSALAPYLQRDEASASSDWSESAAEPKH
Ga0318543_105635371	3300031777	Soil	LRSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSEVGG
Ga0318498_105570551	3300031778	Soil	PQEEDLQSSALAPYLQRVEESASTEWSESTVEPKH
Ga0318566_104246051	3300031779	Soil	ENPTDLPSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSEVGG
Ga0318547_106503351	3300031781	Soil	ENPTELPSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSEVGG
Ga0318552_100007411	3300031782	Soil	KGPKEEDMRGSALAPYLQRAEASASTEWSESTAEPKH
Ga0318552_103237322	3300031782	Soil	KGPREEDLQSSALAPYLQRVEESASTEWSESTVEPKH
Ga0318576_100269511	3300031796	Soil	DLPSVEAKGPQEEAMQNSALAPYLQRVEASASTDWSEVGG
Ga0318576_103210161	3300031796	Soil	RYEAKGPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0310917_102058142	3300031833	Soil	RRVENPTDQPSVGAKGPQEEDVQSSALASYLHRVEPSASTDWSESTVEPKH
Ga0318517_103230432	3300031835	Soil	SIGTKGPQEEDMQGSALASYLHRVEPSASTDWSESTVEPKH
Ga0318511_106186721	3300031845	Soil	VENPTDLPSVEAKGPQEEDMQNSALAPYLQRVEASASTDWPE
Ga0318512_100279201	3300031846	Soil	LTDLPSVEAKGPQQEDMQNSALAPYLQRVEASASTEWSESAAEPKH
Ga0306919_101190523	3300031879	Soil	GPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0306919_105350631	3300031879	Soil	VDSKGLEKEDMQGSALAPYLERVKESASTEWSESTVESKY
Ga0318544_100191533	3300031880	Soil	AKGPQEEDMQSSALASYLHRVEPSASTDWSESTVEPKH
Ga0306925_109787961	3300031890	Soil	RRVENPTDLPSVEAKGPQEEDMQNSALAPYLQRVEASASTDWSESAAEPKH
Ga0306923_107505153	3300031910	Soil	LPSVEAQGPQEEDMQNSALAPYLQRVEASASTDWPESAAEPKH
Ga0310910_113323262	3300031946	Soil	VENPTDLPSVEAKGPQEEDMQNSALAPYLQRFEAPASTDWSESAAEPKH
Ga0310909_100022946	3300031947	Soil	MDLSSPADAKRSQKVDRENSALAPYLQRVEDSASTEWSEATVEPKH
Ga0310909_107998401	3300031947	Soil	ENPTDLPSVEAKGPQEEDMQNSALAPYLQRVEASASTDWA
Ga0306926_100917061	3300031954	Soil	AKGPQEEDVQSSALASYLQRVEASASTDWSESTVEPKH
Ga0306926_101917643	3300031954	Soil	DLPSVEAKGPQEEDMQNSALAPYLQRDEASASSDWSESAAEPKH
Ga0318507_101249471	3300032025	Soil	VEAKGPPEEDMQNSALAPYLQRVEASASTEWSESAAEPKH
Ga0310911_106126602	3300032035	Soil	IGAKGPQEEGMQSSALASYLHRVEPSASTDWSESTVEPKH
Ga0318510_103375461	3300032064	Soil	ENPTDLPSVEAEGPQEEGMQDSALAPYLQRAEASASTEWSESAAEPKH
Ga0318514_105231701	3300032066	Soil	VEAEGRQEEDIQNSALAPYLQRVEAPASTDWSESAAEPKH
Ga0318553_105142971	3300032068	Soil	QPSVGAKGPQEEDVQSSALASYLHRVEPSASTDWSESTVEPKH
Ga0318577_100232131	3300032091	Soil	ADAKRSQKVDRENSALAPYLQRVEDSASTEWSEATVEPKH
Ga0306920_1026611452	3300032261	Soil	RVENPTDLPSVEAKGPQEEDMQNSALAPYLQRDEASASSDWSESAAEPKH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099036

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences