NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F099065

Metagenome Family F099065

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F099065
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 44 residues
Representative Sequence MKRPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP
Number of Associated Samples 80
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 39.81 %
% of genes near scaffold ends (potentially truncated) 36.89 %
% of genes from short scaffolds (< 2000 bps) 69.90 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (47.573 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(64.078 % of family members)
Environment Ontology (ENVO) Unclassified
(81.553 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(84.466 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 2.50%    Coil/Unstructured: 97.50%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF00005ABC_tran 41.75
PF07690MFS_1 24.27
PF12399BCA_ABC_TP_C 12.62
PF02653BPD_transp_2 5.83
PF09334tRNA-synt_1g 0.97
PF03352Adenine_glyco 0.97
PF00127Copper-bind 0.97
PF00211Guanylate_cyc 0.97
PF14890Intein_splicing 0.97
PF01850PIN 0.97
PF03446NAD_binding_2 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0018Arginyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.97
COG0060Isoleucyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.97
COG0143Methionyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.97
COG0215Cysteinyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.97
COG0495Leucyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.97
COG0525Valyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.97
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.97
COG28183-methyladenine DNA glycosylase TagReplication, recombination and repair [L] 0.97

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms52.43 %
UnclassifiedrootN/A47.57 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10008275All Organisms → cellular organisms → Archaea → Euryarchaeota3690Open in IMG/M
3300005166|Ga0066674_10029122All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2431Open in IMG/M
3300005166|Ga0066674_10042914Not Available2025Open in IMG/M
3300005166|Ga0066674_10228214Not Available885Open in IMG/M
3300005166|Ga0066674_10228215Not Available885Open in IMG/M
3300005167|Ga0066672_10541426All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300005167|Ga0066672_10570197Not Available733Open in IMG/M
3300005172|Ga0066683_10290720Not Available1015Open in IMG/M
3300005174|Ga0066680_10003344All Organisms → cellular organisms → Archaea7316Open in IMG/M
3300005174|Ga0066680_10024658All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon3335Open in IMG/M
3300005175|Ga0066673_10001242All Organisms → cellular organisms → Archaea8597Open in IMG/M
3300005176|Ga0066679_10018494All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon3645Open in IMG/M
3300005179|Ga0066684_10087247All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1884Open in IMG/M
3300005186|Ga0066676_10846955Not Available616Open in IMG/M
3300005187|Ga0066675_10045203All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2679Open in IMG/M
3300005446|Ga0066686_10455461All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon873Open in IMG/M
3300005447|Ga0066689_10997511Not Available515Open in IMG/M
3300005450|Ga0066682_10347497All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon955Open in IMG/M
3300005451|Ga0066681_10591832All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300005540|Ga0066697_10485108All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300005540|Ga0066697_10832500All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon501Open in IMG/M
3300005552|Ga0066701_10894056Not Available526Open in IMG/M
3300005553|Ga0066695_10685262All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300005554|Ga0066661_10762535All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300005554|Ga0066661_10951266Not Available502Open in IMG/M
3300005556|Ga0066707_10076326Not Available2011Open in IMG/M
3300005558|Ga0066698_11056108Not Available514Open in IMG/M
3300005559|Ga0066700_10353500All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1037Open in IMG/M
3300005561|Ga0066699_10611774Not Available782Open in IMG/M
3300005568|Ga0066703_10096304All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1734Open in IMG/M
3300005574|Ga0066694_10336285All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300005576|Ga0066708_10541914All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300005576|Ga0066708_10702234Not Available640Open in IMG/M
3300005586|Ga0066691_10027138Not Available2921Open in IMG/M
3300005598|Ga0066706_11057404All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300006031|Ga0066651_10465241All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon671Open in IMG/M
3300006791|Ga0066653_10070531All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1512Open in IMG/M
3300006791|Ga0066653_10110104Not Available1273Open in IMG/M
3300006794|Ga0066658_10578676Not Available611Open in IMG/M
3300006796|Ga0066665_10459404All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1049Open in IMG/M
3300006796|Ga0066665_10463171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales1044Open in IMG/M
3300006796|Ga0066665_10554725All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon933Open in IMG/M
3300006797|Ga0066659_10626095All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon875Open in IMG/M
3300006797|Ga0066659_10633474Not Available870Open in IMG/M
3300009012|Ga0066710_101039645Not Available1265Open in IMG/M
3300009012|Ga0066710_103006097All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon656Open in IMG/M
3300010303|Ga0134082_10210891All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon797Open in IMG/M
3300010304|Ga0134088_10347947Not Available719Open in IMG/M
3300010323|Ga0134086_10055363Not Available1352Open in IMG/M
3300010329|Ga0134111_10333365Not Available638Open in IMG/M
3300010337|Ga0134062_10037962Not Available1926Open in IMG/M
3300012198|Ga0137364_10349477Not Available1103Open in IMG/M
3300012199|Ga0137383_10891211Not Available649Open in IMG/M
3300012204|Ga0137374_10130334Not Available2290Open in IMG/M
3300012206|Ga0137380_10141931Not Available2190Open in IMG/M
3300012206|Ga0137380_11052016Not Available694Open in IMG/M
3300012207|Ga0137381_10011594Not Available6753Open in IMG/M
3300012207|Ga0137381_11311735Not Available617Open in IMG/M
3300012209|Ga0137379_10020386All Organisms → cellular organisms → Archaea6368Open in IMG/M
3300012210|Ga0137378_10421658Not Available1237Open in IMG/M
3300012211|Ga0137377_10001781All Organisms → cellular organisms → Archaea15421Open in IMG/M
3300012211|Ga0137377_10985616Not Available774Open in IMG/M
3300012349|Ga0137387_10372169Not Available1035Open in IMG/M
3300012353|Ga0137367_10453805All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon905Open in IMG/M
3300012353|Ga0137367_10730086All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300012356|Ga0137371_10034726All Organisms → cellular organisms → Bacteria3894Open in IMG/M
3300012357|Ga0137384_10455703Not Available1053Open in IMG/M
3300012976|Ga0134076_10052365All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1543Open in IMG/M
3300015357|Ga0134072_10170740Not Available731Open in IMG/M
3300015358|Ga0134089_10365124All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon611Open in IMG/M
3300017654|Ga0134069_1278514Not Available588Open in IMG/M
3300017656|Ga0134112_10297480Not Available648Open in IMG/M
3300018431|Ga0066655_10019315Not Available3144Open in IMG/M
3300018431|Ga0066655_11060723All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon564Open in IMG/M
3300018468|Ga0066662_12627291All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon532Open in IMG/M
3300018482|Ga0066669_10404258All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1157Open in IMG/M
3300026296|Ga0209235_1007882All Organisms → cellular organisms → Archaea5956Open in IMG/M
3300026307|Ga0209469_1027264Not Available1949Open in IMG/M
3300026307|Ga0209469_1102618All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300026309|Ga0209055_1000919All Organisms → cellular organisms → Archaea19746Open in IMG/M
3300026309|Ga0209055_1020685Not Available3169Open in IMG/M
3300026314|Ga0209268_1010683All Organisms → cellular organisms → Archaea3707Open in IMG/M
3300026315|Ga0209686_1075494All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1196Open in IMG/M
3300026316|Ga0209155_1004167Not Available6502Open in IMG/M
3300026317|Ga0209154_1000212All Organisms → cellular organisms → Archaea41909Open in IMG/M
3300026317|Ga0209154_1008967All Organisms → cellular organisms → Archaea4951Open in IMG/M
3300026324|Ga0209470_1001746All Organisms → cellular organisms → Archaea15827Open in IMG/M
3300026325|Ga0209152_10000288All Organisms → cellular organisms → Archaea24869Open in IMG/M
3300026328|Ga0209802_1011331Not Available5231Open in IMG/M
3300026329|Ga0209375_1055117Not Available1958Open in IMG/M
3300026329|Ga0209375_1113830Not Available1198Open in IMG/M
3300026330|Ga0209473_1062202All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1601Open in IMG/M
3300026333|Ga0209158_1042485All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1903Open in IMG/M
3300026335|Ga0209804_1121851All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1183Open in IMG/M
3300026342|Ga0209057_1179264Not Available612Open in IMG/M
3300026532|Ga0209160_1291430Not Available554Open in IMG/M
3300026536|Ga0209058_1337356Not Available521Open in IMG/M
3300026538|Ga0209056_10094512All Organisms → cellular organisms → Bacteria2463Open in IMG/M
3300026538|Ga0209056_10097635Not Available2409Open in IMG/M
3300026542|Ga0209805_1002723All Organisms → cellular organisms → Archaea10264Open in IMG/M
3300026547|Ga0209156_10326167Not Available683Open in IMG/M
3300026550|Ga0209474_10546026Not Available589Open in IMG/M
3300026552|Ga0209577_10001576All Organisms → cellular organisms → Archaea22540Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil64.08%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil15.53%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil9.71%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.77%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1000827533300002558Grasslands SoilMKRPRRREEKEKSTAKTPKTMDVADAGRLYSLDTRVKKTP*
Ga0066674_1002912223300005166SoilLPGPFLFMKSPRRREETEKNTAKTPKTMDVADAGRLYSLDTRVKKTP*
Ga0066674_1004291423300005166SoilMKSPRRREEKEKNTAKTPKTIDVDDAGRLYSLDTWVKKTP*
Ga0066674_1022821423300005166SoilKMVFPGPFLLMKSPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKNTP*
Ga0066674_1022821523300005166SoilKMVFPGPFLLMKSPRRREEKEKNTANTPKTMDVDDAGRL*
Ga0066672_1054142623300005167SoilMKRPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP*
Ga0066672_1057019713300005167SoilRMVLPGPFFFMKRPRRREEKEKSTAKTPKTMDVADAGRLYSLDTRVKKTP*
Ga0066683_1029072023300005172SoilRRMVLPGPFLFMKSPRRREENEKNMAKTPKTMDVDEAGRLYSPDTWVKKTP*
Ga0066680_1000334473300005174SoilMVLPGPFLFMKRPRRSEEKEKSTAKTPKTIDVADAGRLYSLDTGVKKIP*
Ga0066680_1002465843300005174SoilMKRPRRMEEKENSTAKTPKTMDVADAGRLYSLDTRVKKTP*
Ga0066673_10001242103300005175SoilMRRPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP*
Ga0066679_1001849443300005176SoilMKRPRRREEKENSTAKTPKTMDVADAGRLYSLDTRVKKTP*
Ga0066684_1008724723300005179SoilMKRPRRREEKEKNTANTPKTIDVDDAGRLYSLDTRVKKTP*
Ga0066676_1084695513300005186SoilGPFLLMKSPRRREEKEKNTANTPKTMDVDDAGRLYSMDTRVKKTP*
Ga0066675_1004520353300005187SoilMKRPRKREEKEKSTAKTPKTMDVADAGRLYSLDTRVKKTP*
Ga0066686_1045546123300005446SoilLPGPFLFMKSPRRREENEKNTAKTPKTMDVDDAGRLYFPDTWVKKTP*
Ga0066689_1099751123300005447SoilSRMVLPGPFLFMKRPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP*
Ga0066682_1034749723300005450SoilLPGPFLFMKSPRRREENEKNTAKTPKTMDVDDAGRSYSPDTWVKKTP*
Ga0066681_1059183223300005451SoilMKSPRRREETEKNTAKTPKTMDVADAGRLYSLDTRVKKTP*
Ga0066697_1048510823300005540SoilMKRPRRREEKEKSTAKTPKTIDVADAGRLYSLDT*
Ga0066697_1083250023300005540SoilLPGPFLFMKSPRRREEKEKNTAKTPKTMDVDDAGRLYFPDTWVKKTP*
Ga0066701_1089405613300005552SoilPGPFLFMKRPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP*
Ga0066695_1068526223300005553SoilMKRPRRREEKEKSTAKTPKTIDVADAGRLYSLDTRVKKTP*
Ga0066661_1076253523300005554SoilMKRPRRMEEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP*
Ga0066661_1095126623300005554SoilVLPGPFLFMKRPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP*
Ga0066707_1007632643300005556SoilMKRPRRMEEKENSTAKTPKTMDVAEAGRLYSLDTRVKKTP*
Ga0066698_1105610813300005558SoilKMVFPGPFLLMKSPRRREEKEKNTANTPKMMDVDDAGRLYSLDIRVKNTP*
Ga0066700_1035350023300005559SoilMKRPRRREEKERSTAKTPKTMDVADAGRLYSLDTRVKKTP*
Ga0066699_1061177413300005561SoilREEKEKNTANTPKTMDVDDAGRLYSLDTRVKNTP*
Ga0066703_1009630423300005568SoilMKRPRSREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP*
Ga0066694_1033628523300005574SoilLPGPFLFMKSPRRREENEKNTAKTPKTMDVDEAGRLYSPDTWVKKTP*
Ga0066708_1054191423300005576SoilMKRPRRSEEKEKSTAKTPKTMDVADAGRLYSLDTRVKKTP*
Ga0066708_1070223413300005576SoilRPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP*
Ga0066691_1002713833300005586SoilLPGPFLFMKRPRRREEKENSTAKTPKTMDVADAGRLYSLDTREKKTP*
Ga0066706_1105740423300005598SoilMKRPRRREEKEKSTAKTPKTMDVDDAGRLYSLDTRVKKTP*
Ga0066651_1046524123300006031SoilMKSPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP*
Ga0066653_1007053123300006791SoilMKRPRRREEKEKSTAKTPKTMDVADAGSLYSLDILVKKTP*
Ga0066653_1011010413300006791SoilRRREEKEKNTAKTPKTIDVDDAGRLYSLDTWVKKTP*
Ga0066658_1057867613300006794SoilPFLFMKRPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP*
Ga0066665_1045940423300006796SoilMLMKIPRRREEKEKNTAKTPKTMDVDEAGKLYSPDTWVKKTP*
Ga0066665_1046317123300006796SoilMKRPRRREEKEKSTAKTPKTMDVADAGRLYSLDILVKKTP*
Ga0066665_1055472523300006796SoilMKSPRRREENEKNMAKTPKTMDVDEAGRLYSPDTWVKKTP*
Ga0066659_1062609523300006797SoilMKRPRRREEKEKSTAKTPKTIDVAEAGRLYSLDTRVKKTP*
Ga0066659_1063347423300006797SoilVFPGPFLLMKSPRRREEKEKNTANTPKTMDVDDAGRLYSMDTRVKKTP*
Ga0066710_10103964533300009012Grasslands SoilVFPGPFLLMKSPRRREEKEKNTANTPKTMDVDDAGRLYSMDTRVKKTP
Ga0066710_10300609723300009012Grasslands SoilMKRPRRSEEKEKSTAKTPKTMDVADAGRLYSLDTRVKKTP
Ga0134082_1021089123300010303Grasslands SoilMKSPRRREENEKNTAKTPKTMDVDEAGRLYSPDTWVKKTP*
Ga0134088_1034794723300010304Grasslands SoilGPFLFMKRPRRREEKEKSTAKTPKTIDVADAGRLYSLDTRVKKTP*
Ga0134086_1005536313300010323Grasslands SoilRREEKEKSTAKTPKTMDVADAGRLYSLDTRVKKTP*
Ga0134111_1033336513300010329Grasslands SoilRMVLPGPFLFMKRPRRREEKEKSTAKTPKTIDVADAGRLYSLDT*
Ga0134062_1003796243300010337Grasslands SoilPRRREEKEKNTANTPKTMDVADAGRLYSLDTRVKKTP*
Ga0137364_1034947713300012198Vadose Zone SoilMVFPGPFLLMKSPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKNTP*
Ga0137383_1089121113300012199Vadose Zone SoilKMVFPGPFLLMKSPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP*
Ga0137374_1013033433300012204Vadose Zone SoilMKSPRRREEKEKNTAKTPKTIDVDDAGRLYFPDTWVKKTP*
Ga0137380_1014193143300012206Vadose Zone SoilVLINPPPSKMVFPGPFLLMKSPRRREEKEKNTAKTPKTMDVDDAGKLYSLDIRVKKTP*
Ga0137380_1105201623300012206Vadose Zone SoilSKMVFPGPFLLMKSPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKNTP*
Ga0137381_1001159423300012207Vadose Zone SoilMKRPRRSEEKENSTAKTPKTMDVAEAGRLYSLDTRVKKTP*
Ga0137381_1131173523300012207Vadose Zone SoilPPSKMVFPGPFLLMKSPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKNTP*
Ga0137379_1002038633300012209Vadose Zone SoilMKSPRRREEKEKNTAKTPKTMDVDDAGKLYSLDIRVKKTP*
Ga0137378_1042165833300012210Vadose Zone SoilPSKMVFPGPFLLMKSPRRREEKEKNTAKTPKTMDVDDAGKLYSLDIRVKKTP*
Ga0137377_1000178143300012211Vadose Zone SoilMREENEKNMAKTPKTMDVDEAGRLYSPDTWVKKTP*
Ga0137377_1098561623300012211Vadose Zone SoilFPGPFLLMKSPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKNTP*
Ga0137387_1037216933300012349Vadose Zone SoilFLLMKSPRRREEKEKNTAKTPKMMDVDEAGKLYSLDTRVKKTP*
Ga0137367_1045380523300012353Vadose Zone SoilMKRPRRREEREKSTAKTPKTMDVADAGRLYSLDTRVKKTP*
Ga0137367_1073008623300012353Vadose Zone SoilMKSPRRREEKEKNTAKTPKTMDVADAGRLYSLDTRVKKTP*
Ga0137371_1003472633300012356Vadose Zone SoilMKSPRRREEKEKNTANTPKTMDVDDAGRLYSLDKRVKKTP*
Ga0137384_1045570313300012357Vadose Zone SoilPGPFLLMKSPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKNTP*
Ga0134076_1005236533300012976Grasslands SoilMKSPRRREETEKNTAKTPKTMDVDDAGRSYSPDTWVKKTP*
Ga0134072_1017074013300015357Grasslands SoilRMVLPGPFLFMRRPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP*
Ga0134089_1036512423300015358Grasslands SoilMKSPRRKAEKEKKTANMPKTMDVDDAGRLYFPDTWVKKTP*
Ga0134069_127851413300017654Grasslands SoilMVLPGPFLFMKSPRRREEKEKNTAKTPKTIDVDDAGRLYSLDTWVKKTP
Ga0134112_1029748023300017656Grasslands SoilLPGPFLFIKSPRRREEKEKNTAKTPNTMDVDDAGRLYSLDTWVKKTP
Ga0066655_1001931533300018431Grasslands SoilLPGPFLFMKSPRRREETEKNTAKTPKTMDVADAGRLYSLDTRVKKTP
Ga0066655_1106072323300018431Grasslands SoilMKRPRRREEKEKNTANTPKTIDVDDAGRLYSLDTRVKKTP
Ga0066662_1262729123300018468Grasslands SoilMKRPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP
Ga0066669_1040425823300018482Grasslands SoilMKSPRRREEKEKNTAKTPKTIDVDDAGRLYSLDTWVKKTP
Ga0209235_100788253300026296Grasslands SoilMKRPRRREEKEKSTAKTPKTMDVADAGRLYSLDTRVKKTP
Ga0209469_102726433300026307SoilMKSPRRREETEKNTAKTPKTMDVADAGRLYSLDTRVKKTP
Ga0209469_110261823300026307SoilMKSPRRREENEKNTAKTPKTMDVDDAGRSYSPDTWVKKTP
Ga0209055_1000919143300026309SoilMKRPRRREEKENSTAKTPKTMDVADAGRLYSLDTRVKKTP
Ga0209055_102068533300026309SoilLPGPFLFMKRPRSREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP
Ga0209268_101068363300026314SoilPPRRMVLPGPFLFMKSPRRREENEKNTAKTPKTMDVDDAGRLYSLDTRVKKTP
Ga0209686_107549423300026315SoilMKRPRSREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP
Ga0209155_100416763300026316SoilMRRPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP
Ga0209154_1000212173300026317SoilLPGPFLFMKRPRRREEKENSTAKTPKTMDVADAGRLYSLDTRVKKTP
Ga0209154_100896733300026317SoilLPGPFLFMKRPRRMEEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP
Ga0209470_1001746113300026324SoilMKRPRKREEKEKSTAKTPKTMDVADAGRLYSLDTRVKKTP
Ga0209152_1000028863300026325SoilLPGPFLFMKRPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP
Ga0209802_101133133300026328SoilMKRPRRMEEKENSTAKTPKTMDVAEAGRLYSLDTRVKKTP
Ga0209375_105511733300026329SoilMKSPRRREENEKNMAKTPKTMDVDEAGRLYSPDTWVKKTP
Ga0209375_111383013300026329SoilRRSEEKEKSTAKTPKTMDVADAGRLYSLDTRVKKTP
Ga0209473_106220223300026330SoilLPGPFLFMKRPRRREEKEKNTANTPKTIDVDDAGRLYSLDTRVKKTP
Ga0209158_104248523300026333SoilMKRPRRMEEKENSTAKTPKTMDVADAGRLYSLDTREKKTP
Ga0209804_112185133300026335SoilMKRPRRREEKEKSTAKTPKTIDVADAGRLYSLDTRVKKTP
Ga0209057_117926413300026342SoilKLPPIRMVLPGPFFFMKRPRRREEREKSTAKTPKTMDVADAGRLYSLDTRVKKTP
Ga0209160_129143023300026532SoilPPPSKMVFPGPFLLMKSPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKKTP
Ga0209058_133735623300026536SoilPGPFLLMKSPRRREEKEKNTANTPKMMDVDDAGRLYSLDIRVKNTP
Ga0209056_1009451243300026538SoilMKSPRRTEEKEKNTAKTPKTMDVDDAGRLYSPDTWVKKTP
Ga0209056_1009763523300026538SoilMKRPRRREEKEKSTAKTPKTMDVADAGRLYSLDILVKKTP
Ga0209805_100272323300026542SoilLPGPFLLIKRPRRREEKEKNTANTPKTMDVEDAGRLYSLDTRVKKTP
Ga0209156_1032616723300026547SoilKRPRRREEKEKNTANTPKTMEVDDAGRLYSLDTRVKKTP
Ga0209474_1054602613300026550SoilIKPPPRRMVLPGPFLFMKSPRRREETEKNTAKTPKTMDVADAGRLYSLDTRVKKTP
Ga0209577_10001576123300026552SoilLPGPSLFMKRPRRREEKEKNTANTPKTMDVDDAGRLYSLDTRVKNTP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.