Metagenome / Metatranscriptome Family F099088

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099088
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	64 residues
Representative Sequence	MAMARTLVVVPRRPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Number of Associated Samples	70
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.67 %
% of genes near scaffold ends (potentially truncated)	24.27 %
% of genes from short scaffolds (< 2000 bps)	97.09 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (73.786 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (32.039 % of family members)
Environment Ontology (ENVO)	Unclassified (51.456 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.786 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.97% β-sheet: 0.00% Coil/Unstructured: 67.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF08279	HTH_11	7.77
PF07452	CHRD	1.94
PF00753	Lactamase_B	1.94
PF02652	Lactate_perm	0.97
PF00072	Response_reg	0.97
PF08241	Methyltransf_11	0.97
PF12833	HTH_18	0.97
PF04204	HTS	0.97
PF00296	Bac_luciferase	0.97
PF09250	Prim-Pol	0.97
PF03237	Terminase_6N	0.97
PF00144	Beta-lactamase	0.97
PF06568	DUF1127	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1620	L-lactate permease	Energy production and conversion [C]	0.97
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.97
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.97
COG1897	Homoserine O-succinyltransferase	Amino acid transport and metabolism [E]	0.97
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.97
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.97
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.79 %
All Organisms	root	All Organisms	26.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.79 %
cellular organisms	root	All Organisms → cellular organisms	26.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.24 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.45 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.88 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.88 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.97 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.88 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.97 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100321474	Not Available	1430	Open in IMG/M
3300005332\|Ga0066388_101612996	Not Available	1142	Open in IMG/M
3300005332\|Ga0066388_102189057	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300005363\|Ga0008090_15828163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300005764\|Ga0066903_102587211	Not Available	983	Open in IMG/M
3300005764\|Ga0066903_102717688	Not Available	960	Open in IMG/M
3300005764\|Ga0066903_103659359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	827	Open in IMG/M
3300005764\|Ga0066903_105080048	Not Available	697	Open in IMG/M
3300005764\|Ga0066903_106247720	Not Available	622	Open in IMG/M
3300005764\|Ga0066903_109057354	Not Available	504	Open in IMG/M
3300006755\|Ga0079222_11380773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300009792\|Ga0126374_10770567	Not Available	732	Open in IMG/M
3300010043\|Ga0126380_12154469	Not Available	514	Open in IMG/M
3300010046\|Ga0126384_11174361	Not Available	707	Open in IMG/M
3300010047\|Ga0126382_11134654	Not Available	695	Open in IMG/M
3300010048\|Ga0126373_11178521	Not Available	832	Open in IMG/M
3300010048\|Ga0126373_12167617	Not Available	617	Open in IMG/M
3300010359\|Ga0126376_10716084	Not Available	965	Open in IMG/M
3300010359\|Ga0126376_10916938	Not Available	868	Open in IMG/M
3300010359\|Ga0126376_12587357	All Organisms → cellular organisms → Bacteria → Proteobacteria	556	Open in IMG/M
3300010359\|Ga0126376_12952998	Not Available	525	Open in IMG/M
3300010360\|Ga0126372_12452291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300010361\|Ga0126378_10660067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1159	Open in IMG/M
3300010361\|Ga0126378_13099726	Not Available	529	Open in IMG/M
3300010362\|Ga0126377_12381304	Not Available	605	Open in IMG/M
3300010366\|Ga0126379_11088170	Not Available	905	Open in IMG/M
3300010366\|Ga0126379_13258665	Not Available	544	Open in IMG/M
3300010366\|Ga0126379_13541297	Not Available	523	Open in IMG/M
3300010376\|Ga0126381_101340253	All Organisms → cellular organisms → Bacteria → Proteobacteria	1034	Open in IMG/M
3300010376\|Ga0126381_102502872	Not Available	740	Open in IMG/M
3300010376\|Ga0126381_104671650	Not Available	527	Open in IMG/M
3300010376\|Ga0126381_104680392	Not Available	527	Open in IMG/M
3300010376\|Ga0126381_105092141	Not Available	503	Open in IMG/M
3300010398\|Ga0126383_10944883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	949	Open in IMG/M
3300010398\|Ga0126383_11431718	Not Available	781	Open in IMG/M
3300010398\|Ga0126383_13008279	Not Available	550	Open in IMG/M
3300012198\|Ga0137364_10197629	Not Available	1473	Open in IMG/M
3300012582\|Ga0137358_11078000	Not Available	514	Open in IMG/M
3300012925\|Ga0137419_11073465	Not Available	670	Open in IMG/M
3300012948\|Ga0126375_10750734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	766	Open in IMG/M
3300012971\|Ga0126369_10828268	Not Available	1009	Open in IMG/M
3300016270\|Ga0182036_11498452	Not Available	566	Open in IMG/M
3300016270\|Ga0182036_11548092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	557	Open in IMG/M
3300016294\|Ga0182041_10122391	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1956	Open in IMG/M
3300016294\|Ga0182041_11727041	Not Available	579	Open in IMG/M
3300016319\|Ga0182033_11898689	Not Available	541	Open in IMG/M
3300016341\|Ga0182035_11580880	Not Available	591	Open in IMG/M
3300016371\|Ga0182034_11564755	Not Available	578	Open in IMG/M
3300016422\|Ga0182039_10002288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10469	Open in IMG/M
3300016422\|Ga0182039_10912232	Not Available	785	Open in IMG/M
3300018482\|Ga0066669_11460384	Not Available	620	Open in IMG/M
3300020579\|Ga0210407_10368724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1123	Open in IMG/M
3300020579\|Ga0210407_10926976	Not Available	667	Open in IMG/M
3300020581\|Ga0210399_11546325	Not Available	513	Open in IMG/M
3300021170\|Ga0210400_10434538	Not Available	1083	Open in IMG/M
3300021178\|Ga0210408_10351933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1174	Open in IMG/M
3300021478\|Ga0210402_10827740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	851	Open in IMG/M
3300021479\|Ga0210410_11110614	Not Available	681	Open in IMG/M
3300021560\|Ga0126371_10806371	Not Available	1085	Open in IMG/M
3300021560\|Ga0126371_11309285	Not Available	858	Open in IMG/M
3300021560\|Ga0126371_11525261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	796	Open in IMG/M
3300021560\|Ga0126371_11564049	Not Available	786	Open in IMG/M
3300021560\|Ga0126371_11696614	Not Available	756	Open in IMG/M
3300021560\|Ga0126371_13628994	Not Available	521	Open in IMG/M
3300025916\|Ga0207663_10919021	Not Available	700	Open in IMG/M
3300027502\|Ga0209622_1084825	Not Available	580	Open in IMG/M
3300027765\|Ga0209073_10496548	Not Available	514	Open in IMG/M
3300027874\|Ga0209465_10206573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	980	Open in IMG/M
3300027903\|Ga0209488_10971143	Not Available	591	Open in IMG/M
3300028047\|Ga0209526_10052905	All Organisms → cellular organisms → Bacteria → Proteobacteria	2860	Open in IMG/M
3300031446\|Ga0170820_11248737	Not Available	1009	Open in IMG/M
3300031469\|Ga0170819_16749057	Not Available	732	Open in IMG/M
3300031474\|Ga0170818_105922426	Not Available	1406	Open in IMG/M
3300031543\|Ga0318516_10587171	Not Available	636	Open in IMG/M
3300031544\|Ga0318534_10279154	Not Available	963	Open in IMG/M
3300031561\|Ga0318528_10072885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1770	Open in IMG/M
3300031680\|Ga0318574_10246291	Not Available	1033	Open in IMG/M
3300031682\|Ga0318560_10060698	All Organisms → cellular organisms → Bacteria → Proteobacteria	1885	Open in IMG/M
3300031719\|Ga0306917_10492051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	963	Open in IMG/M
3300031763\|Ga0318537_10264167	Not Available	638	Open in IMG/M
3300031797\|Ga0318550_10589645	Not Available	534	Open in IMG/M
3300031799\|Ga0318565_10536893	Not Available	564	Open in IMG/M
3300031845\|Ga0318511_10126452	Not Available	1105	Open in IMG/M
3300031890\|Ga0306925_10965909	Not Available	871	Open in IMG/M
3300031896\|Ga0318551_10044453	Not Available	2217	Open in IMG/M
3300031910\|Ga0306923_11712205	Not Available	649	Open in IMG/M
3300031910\|Ga0306923_12469183	Not Available	513	Open in IMG/M
3300031912\|Ga0306921_10687073	Not Available	1177	Open in IMG/M
3300031942\|Ga0310916_10471562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1069	Open in IMG/M
3300031946\|Ga0310910_11539571	Not Available	509	Open in IMG/M
3300031947\|Ga0310909_10652335	Not Available	877	Open in IMG/M
3300031954\|Ga0306926_10838173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1106	Open in IMG/M
3300031954\|Ga0306926_11942873	Not Available	663	Open in IMG/M
3300031962\|Ga0307479_11172393	All Organisms → cellular organisms → Bacteria → Proteobacteria	733	Open in IMG/M
3300031981\|Ga0318531_10071792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1498	Open in IMG/M
3300032001\|Ga0306922_10260789	Not Available	1863	Open in IMG/M
3300032035\|Ga0310911_10140133	All Organisms → cellular organisms → Bacteria → Proteobacteria	1355	Open in IMG/M
3300032067\|Ga0318524_10548233	Not Available	608	Open in IMG/M
3300032205\|Ga0307472_100924733	Not Available	810	Open in IMG/M
3300032205\|Ga0307472_102366934	Not Available	538	Open in IMG/M
3300032261\|Ga0306920_101242338	Not Available	1074	Open in IMG/M
3300032261\|Ga0306920_103426294	Not Available	588	Open in IMG/M
3300032261\|Ga0306920_104211976	Not Available	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.38%
Loam	Environmental → Terrestrial → Soil → Loam	12.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.97%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	32.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1003214743	3300002245	Forest Soil	MAMARTLVVVPRRPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF*
Ga0066388_1016129962	3300005332	Tropical Forest Soil	MAMASALVVVPRRPCEAAPRPRVHVQGRLAGVLRRFLFELASLPDQGATADDLPPEFFRFPPL*
Ga0066388_1021890571	3300005332	Tropical Forest Soil	MAMASTLVVVARMPREAAPRGQIRVQRRLAAVLRRFLSELAAVPDHGARLDDLPPEFFRFPPF*
Ga0008090_158281632	3300005363	Tropical Rainforest Soil	MAMARTLVVLPRRPREVAPRGQIRVQRRLAGVLRRFLSELAALPDHGATLDDLPPEFFRFPPF*
Ga0066903_1025872112	3300005764	Tropical Forest Soil	MAMASTLVVVPRMPREAAPRGQIHVQRRLAAVLRRFLSELAALPDHGARLDDLPPEFFRFPPF*
Ga0066903_1027176883	3300005764	Tropical Forest Soil	MAMVTTPVVIPRRPREAVPGAQVRVQHRLAAALRRFLSELAALPDRGATLADLPPEFYRFPPL*
Ga0066903_1036593592	3300005764	Tropical Forest Soil	MAMASTLVVVPRMPREAAPRGQIRVQRRLAAVLRRFLSELAAVPDHGARLDDLPPEFFRFPPF*
Ga0066903_1050800482	3300005764	Tropical Forest Soil	MAMAGTLVVVSLRPREAAPRGQIRVLRRLAAVLRRFLSELAALPDRGATLDDLPPEFFRFPPF*
Ga0066903_1062477201	3300005764	Tropical Forest Soil	MAMASALVVVPRRPCEAAPRPRVNVQGRLAGVLRRFLFELASLPDQGATAEDLPPEFFRFPPL*
Ga0066903_1090573541	3300005764	Tropical Forest Soil	MATVRTLVVIPRRRRKAAKIRIQRRLAAALWRYLSELAALPDRSATFDDLPPEFFRFPPF
Ga0079222_113807733	3300006755	Agricultural Soil	MATASTLVVVPRGRCDAAPRGQIRIQRRLAAALRRFLSELAALPDHDPTLDDLPTEFFRFPPF*
Ga0126374_107705672	3300009792	Tropical Forest Soil	MAMASTLVVVPRMPREAAPRGQIRVQRRLAAVLRRFLSELVAVPDHGAKLDDLPPEFFRFPPF*
Ga0126380_121544691	3300010043	Tropical Forest Soil	MAMASTLVVVPQMPREVALRGQIRVQRRLAAVLRRFLSELAALPDHGARLDDLPPEFFRFPPF*
Ga0126384_111743611	3300010046	Tropical Forest Soil	MAMASALVGVPRRPCELAPRAPINVQGRLAAVLRRFLFELASLPDQGATADDLPPEFFRFPPF*
Ga0126382_111346541	3300010047	Tropical Forest Soil	MALARTLVVVLRRPREAARGQIRVQRRLSVVLRRFLSELAALPDHGATLDDLPPEFFRFPPF*
Ga0126373_111785211	3300010048	Tropical Forest Soil	MAMARTLVVVPRRPREAEPRGQICIQRRLATVLRRFLSELAAFPDHGAPLDDLPPEFFR
Ga0126373_121676172	3300010048	Tropical Forest Soil	MATAKTLVVIPRRRRKAAKLRIQRRLAAALWRYLFELAALPDRSATFDDLPPEFFRFPPF
Ga0126376_107160843	3300010359	Tropical Forest Soil	MTLARTLVVVPRRPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF*
Ga0126376_109169382	3300010359	Tropical Forest Soil	MAMASALVVVPRRPCEAAPRPRVNVQRRLAGVLRRFLFELASLPDQGATADDLPPEFFRFPPL*
Ga0126376_125873572	3300010359	Tropical Forest Soil	MAMATTLVVVPRRPREAAPRGQIRLQSRLAAVLRRFLSELAALPNHGAMLDDLPLEFFRFPPF*
Ga0126376_129529981	3300010359	Tropical Forest Soil	EHPVATARTLVVVPRSRREAAKIRRQRRLAATLWRYLSELAALPDRSATFDDLPPEFFRFPPF*
Ga0126372_124522911	3300010360	Tropical Forest Soil	MAMASTLVVVPRMPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGARLDDLPPEFFRFPPF*
Ga0126378_106600673	3300010361	Tropical Forest Soil	MAMASALVVVPRRPWKATPRSRVNVQRRLAGVLRRFLFELASLPDQGATADDLPPEFFRFPPL*
Ga0126378_130997262	3300010361	Tropical Forest Soil	MAMAGTLVVVSRRPRETAPRVQIWAQRRLAAVLRRYLSELAALPDQGARPDDLPPEFFRFPPF*
Ga0126377_123813042	3300010362	Tropical Forest Soil	MALARTLVVVPRRPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF*
Ga0126379_110881703	3300010366	Tropical Forest Soil	MAMASALVVVPRRPCEAPPRPRVNVQGRLAGVLRRFLFELASLPDQGATADDLPPEFFRFPPL*
Ga0126379_132586652	3300010366	Tropical Forest Soil	MAMATTLVVVPRRPREAAARAQIRVQHRLAAVLWRFFSELAALPDRGGTTDDLPPEFFRFPPL*
Ga0126379_135412972	3300010366	Tropical Forest Soil	MAMAGTLVVVPRRPREAAPRGQIRLQRRLAAVLRRFLSELAALPDHGAMLDDLPPEFFRFPPF*
Ga0126381_1013402532	3300010376	Tropical Forest Soil	MAMASTLVVVPRMPREAAPRGQIRVQRRLAAVLRRFLSELAAVPDHGAKLDDLPPEFFRFPPF*
Ga0126381_1025028721	3300010376	Tropical Forest Soil	MAMASALVVAPRRPCEAAPRPRVNVQGRLAGVLRRFLFELASLPDQGATADDLPPEFFRFPPL*
Ga0126381_1046716501	3300010376	Tropical Forest Soil	MAMAGTLVVVSRRPRETAPRVQIRAQRRLAAVLRRYLSELAALPDEGARPDDLPPEFFRFPPL*
Ga0126381_1046803922	3300010376	Tropical Forest Soil	LVVVLRRPVEAAPRRQIRIQRRLAAVLRRFLSELAALPDHCARRDDLLPEFFRFPPF*
Ga0126381_1050921411	3300010376	Tropical Forest Soil	MAVAGTLAVVPRRPRKAAKIRVQRRLTAALWRYLFELTDLPDRGATLADLPPEFFRFPPF
Ga0126383_109448832	3300010398	Tropical Forest Soil	MATARTLVVIPRRRRKAAKIRIQRRLAAALWRYLSELAALPDRSATFDDLPPEFFRFPPF
Ga0126383_114317181	3300010398	Tropical Forest Soil	MAMAMASALVVVPRRLCEAAPRPRVNVQGRLAGVLRRFLFELASLPDQGATADDLPPEFFRFPPL*
Ga0126383_130082792	3300010398	Tropical Forest Soil	MAMAATLVVVRRSPREAVPGAQVRVQHRLAAALRRFLSELAALPDRGATLDDLPPAFYRFPPL*
Ga0137364_101976292	3300012198	Vadose Zone Soil	MAMASTLVVVPRRRREAAPRGQICVQRRLAAVLRRFLSELAALPDHGAMLDDLPPEFFRFPPF*
Ga0137358_110780002	3300012582	Vadose Zone Soil	MAMARTLVVVPRRPREAAPRGQIRVQRRSAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF*
Ga0137419_110734652	3300012925	Vadose Zone Soil	VAMARTLVVVPRRPREAAPRGQTCVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF*
Ga0126375_107507342	3300012948	Tropical Forest Soil	MAMASTLVVVPRMPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF*
Ga0126369_108282681	3300012971	Tropical Forest Soil	MAMASALVVVPRRPCEAAPRPRVNVQGRLAGVLRRFLFELASLPDQAATADDLPPEFFRFPPL*
Ga0182036_114984521	3300016270	Soil	MAIASTLVVVPRRPRETARRAQIRAERRLTAVLRRFLSELAALPDQGATPADLPPEFFRFPPL
Ga0182036_115480921	3300016270	Soil	MTMARTLVVVPRRPRETAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPP
Ga0182041_101223913	3300016294	Soil	MAMARTLVVVPRRRREVAPRGQIRVQRRLAAVLRRFFSELAALPDHGATLDDLPPEFFRFPPF
Ga0182041_117270412	3300016294	Soil	MATARTLVVIPRRRRKAAKIRIQRRLTAALWRYLSELAALPDRSATFEDLPPEFFRFPPF
Ga0182033_118986892	3300016319	Soil	MAMARTLVVVPRRRREVAPRGQIRVQRRLAAVLRRFLSELAALPDHVATLDDLPPEFFRFPPF
Ga0182035_115808802	3300016341	Soil	MAIASTLVVVPRRPRETARRAQIRAQRRLAAVLRRYLSELATLPDQGATPDDLPPEFFRFPPL
Ga0182034_115647552	3300016371	Soil	MATARTLVVIPRRRRKAAKIRIQRRLTAALWRYLSELAALPDRSATLEDLPPEFFRLPPF
Ga0182039_100022881	3300016422	Soil	MAMASTLVVVPRMPREAAPREQIRVQRRLAAVLRRSLSELAAFPDHGATLDDLPP
Ga0182039_109122322	3300016422	Soil	MAMASALVAVPRRPCKATPRPRVNVRERLAGVLRRFLFELASLPDQGATADDLPPEFFRFPPL
Ga0066669_114603841	3300018482	Grasslands Soil	MAMARTLVVVPRRPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGAMLDDLPPEFFRFPPF
Ga0210407_103687241	3300020579	Soil	VPTVDDKERPVALTERLIVVPPREAASRANPRPSRLGAVWRRFLAELAALPDHGATLDDLPPEFFRFPPL
Ga0210407_109269761	3300020579	Soil	MAMARMLVVVPRRPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0210399_115463251	3300020581	Soil	MAMAITLVVVPRRPRETARRAQIRGQPQLAAGLRRFLSELAALPDQGATPDDLPPEFFRFPPL
Ga0210400_104345381	3300021170	Soil	TLPTVDDKERPVALTERLIVVPPREAASRANPLPSRLGAVWRRFLAELAALPDHGATLDDLPPEFFRFPPL
Ga0210408_103519332	3300021178	Soil	KEHPMAMARTLVVVPRRPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0210402_108277402	3300021478	Soil	SKEHPVAMARTLVVVPRRPREAAPRGQTRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0210410_111106141	3300021479	Soil	PAGAFGVDDKERPVALTERLIVVPPREAASRANPRPSRLGAVWRRFLAELAALPDHGATLDDLPPEFFRFPPL
Ga0126371_108063713	3300021560	Tropical Forest Soil	MAMASALVVAPRRPCEAAPRPRVNVQGRLAGVLRRFLFELASLPDQGATADDLPPEFFRFPPL
Ga0126371_113092852	3300021560	Tropical Forest Soil	MAMARTLVVDPRRRRKGVKIRVQRRLAAVLWRYLSEVTALPDRITTLDDLPPEFFRFPPF
Ga0126371_115252612	3300021560	Tropical Forest Soil	MAMASTLVVVPRIPREVAPRGQIRLQSRLAAVLRRFLSELAALPNHGAMLDDLPLEFFRFPPF
Ga0126371_115640492	3300021560	Tropical Forest Soil	MAMASTLVVVPRMPREAAPRGQIRVQRRLAAVLRRFLSELAAVPDHGARLDDLPPEFFRFPPF
Ga0126371_116966141	3300021560	Tropical Forest Soil	MAMAGTLVVVSRRPRETAPRVQIRAQHRLAAVLRRYLSGLAALPDQGARPDDLPPEFFRFPPL
Ga0126371_136289942	3300021560	Tropical Forest Soil	DDKEHPMAMAGTLVVVPRRPRETAPRVQIRAQRRLAAVLRRYLSELVTLPDQGATPDDLPPEFFRFPPL
Ga0207663_109190211	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MARTLIVVPRRPREAAPRGQIRAQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPP
Ga0209622_10848252	3300027502	Forest Soil	VDDKERPMVIARRLVVVPRRLLAAAPRGQIRVQRRLAAVLRRFLSELAALPDHGAAHDDLPPEFFRFPPF
Ga0209073_104965481	3300027765	Agricultural Soil	LVVVPRGRCDAAPRGQIRIQRRLAAALRRFLSELAALPDHDPTLDDLPTEFFRFPLF
Ga0209465_102065733	3300027874	Tropical Forest Soil	RLSVEPTYTPAVDDKEHPMAMASTLVVVPRMPREAAPRGQIHVQRRLAAVLRRFLSELAALPDHGARLDDLPPEFFRFPPF
Ga0209488_109711432	3300027903	Vadose Zone Soil	MAIARTLVVVPRRPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0209526_100529054	3300028047	Forest Soil	MAMARTLVVVPRRPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0170820_112487372	3300031446	Forest Soil	MAMARTLVVVPRRPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDHLPPEFFRFPPF
Ga0170819_167490572	3300031469	Forest Soil	MAMARTLVVVPRRPREAAPRGQIPVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0170818_1059224261	3300031474	Forest Soil	MAMARTLVVVPRRPREVAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDHLPPEFFRFPPF
Ga0318516_105871712	3300031543	Soil	MAMASTLVVVPRMPREAAPREQIRVQRRLAAVLRRSLSELAAFPDHGATLDDLPPEFFRFPPF
Ga0318534_102791541	3300031544	Soil	MAMARTLVVVPRRPREAAPRGQIRVQRRLAAVLRRFLSELAALPDGATLDDLPPEFFRFPPF
Ga0318528_100728854	3300031561	Soil	MTMARTLVVVPRRPRETAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0318574_102462912	3300031680	Soil	MAMASTLVVVPRMPREAAPREQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0318560_100606983	3300031682	Soil	MAGTLVVVPRMPREAAPREQIRVQRRLAAVLRRSLSELAAFPDHGATLDDLPPEFFRFPP
Ga0306917_104920513	3300031719	Soil	MAMASTLVVVPRMPREAAPRGQIRVQRRLAAVLGRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0318537_102641671	3300031763	Soil	PAVDDKEHPMAMAGTLVVVPRMPREAAPREQIRVQRRLAAVLRRSLSELAAFPDHGATLDDLPPEFFRFPPF
Ga0318550_105896451	3300031797	Soil	PMTMARTLVVVPRRPRETAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0318565_105368931	3300031799	Soil	EHPMAMARTLVMVPRRPREAAPRGKIRVQQRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0318511_101264522	3300031845	Soil	MAMARTLVVVPRRPREAAPRGQIRAQRRLAAVLHRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0306925_109659092	3300031890	Soil	MAMARTLVVVPRRRREVAPRGQIRVQRRLAAVLRRFLSELAALPDHDATLDDLPPKFFRFPPF
Ga0318551_100444534	3300031896	Soil	MAMASTLVVVPRMPREAAPREQIRVQRRLAAVLRRSLSELAAFPDHGATLDDLPPEFFRF
Ga0306923_117122053	3300031910	Soil	DDKEHPMAIASTLVVVPRRPRETARRAQIRAQRRLAAVLRRYLSELATLPDQGATPDDLPPEFFRFPPL
Ga0306923_124691832	3300031910	Soil	MAMAKTLVRVPRRPRKAAKIPRQRQLVAALWRYLFELAALPDRGQTLDDLPPEFFRFPPF
Ga0306921_106870732	3300031912	Soil	MAMASALVVVPRRPREAAPRPRVNVRGRLAGVLRRFLFELASLPDQGATADDLPPEFFRFPPL
Ga0310916_104715621	3300031942	Soil	MAKTLVRVPRRPRKAAKIPLQRKLAATLWRYLFELAALPDRGATLDDLPPEFFRFPPF
Ga0310910_115395712	3300031946	Soil	IPMTMARTLVVVPRRPRETAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0310909_106523352	3300031947	Soil	MAMARTLVVVPRRPREAAPRGQIRVQRRLAAALRRFLSELAALPDHGATLDDLPPEFFHFPPF
Ga0306926_108381731	3300031954	Soil	MAMARTLVMVPRRPREAAPRGKIRVQQRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0306926_119428731	3300031954	Soil	LLTKRCQWSQRTLPTVDDKEHPMAMARTLVVVPRRRREVAPRGQIRVQRRLAAVLRRFLSELAALPDHDATLDDLPPKFFRFPPF
Ga0307479_111723931	3300031962	Hardwood Forest Soil	MAMARTLVVVPRRPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGAPLDDLPPEFFRFPPF
Ga0318531_100717922	3300031981	Soil	MARTLVVVPRRPRETAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPP
Ga0306922_102607893	3300032001	Soil	MAMARTLVVVPRRPREAAPRGQIRVQRRLAAALRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0310911_101401331	3300032035	Soil	MTIARTLVVVPRRPRETAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPPEFFRFPPF
Ga0318524_105482333	3300032067	Soil	MATARTLVVIPRRRRKAAKIRIQRRLTAALWRYLSELAALPGRSATFEDLPPEFFRFPPF
Ga0307472_1009247333	3300032205	Hardwood Forest Soil	QNAFSRANVHSPPLTTEHPMAMARTLVVVPRRPREAAPRGQIRVQRRLAAVLRRFLSELAALPDHGATLDDLPLEFFRFPPF
Ga0307472_1023669342	3300032205	Hardwood Forest Soil	VALTERLIVVPPREAASRANPRPSRLGAVWRRFLAELAALPDHGATLDDLPPEFFRFPPL
Ga0306920_1012423382	3300032261	Soil	MAMASALVVVPRRPCKAAPRPRVNVQRRLAGVLRRFLFELASLPDQGATADDLPPEFFRFPPL
Ga0306920_1034262941	3300032261	Soil	QQSQRILPAVDEKEHPMAMARTLVVVPRRPREAAPRGQIRVRRRLAAVLRRFFSELAALPDHGATLDDLPPEFFRFPPF
Ga0306920_1042119762	3300032261	Soil	MAMAMTVVVVPRRPRDTAPRAQIRAQRRLAAVLRRFLSELAALPDQGATPADLPPEFFRFPPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099088

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences