NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F099132

Metagenome Family F099132

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F099132
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 54 residues
Representative Sequence MNKVNIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS
Number of Associated Samples 89
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 66.02 %
% of genes near scaffold ends (potentially truncated) 34.95 %
% of genes from short scaffolds (< 2000 bps) 90.29 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (61.165 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(33.981 % of family members)
Environment Ontology (ENVO) Unclassified
(91.262 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(95.146 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.55%    β-sheet: 0.00%    Coil/Unstructured: 45.45%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF03237Terminase_6N 1.94
PF16190E1_FCCH 0.97
PF11171DUF2958 0.97
PF12236Head-tail_con 0.97



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A61.17 %
All OrganismsrootAll Organisms38.83 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10058802Not Available1862Open in IMG/M
3300000101|DelMOSum2010_c10093978Not Available1272Open in IMG/M
3300000115|DelMOSum2011_c10094882Not Available994Open in IMG/M
3300000115|DelMOSum2011_c10123935Not Available804Open in IMG/M
3300000116|DelMOSpr2010_c10155196Not Available779Open in IMG/M
3300000117|DelMOWin2010_c10045059All Organisms → Viruses1997Open in IMG/M
3300000117|DelMOWin2010_c10179426Not Available669Open in IMG/M
3300001355|JGI20158J14315_10160503All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300001460|JGI24003J15210_10144887Not Available616Open in IMG/M
3300001472|JGI24004J15324_10028115All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage Lederberg EXVC029P1852Open in IMG/M
3300001472|JGI24004J15324_10138551Not Available576Open in IMG/M
3300001472|JGI24004J15324_10147318Not Available548Open in IMG/M
3300001589|JGI24005J15628_10038849All Organisms → Viruses → environmental samples → uncultured marine virus1928Open in IMG/M
3300001740|JGI24656J20076_1000093Not Available26604Open in IMG/M
3300002482|JGI25127J35165_1067868All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300002483|JGI25132J35274_1065977Not Available764Open in IMG/M
3300003478|JGI26238J51125_1048945Not Available872Open in IMG/M
3300004461|Ga0066223_1211372Not Available555Open in IMG/M
3300005747|Ga0076924_1106339Not Available666Open in IMG/M
3300006027|Ga0075462_10061982All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC204P1181Open in IMG/M
3300006735|Ga0098038_1150728All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium775Open in IMG/M
3300006737|Ga0098037_1031680All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1946Open in IMG/M
3300006737|Ga0098037_1090926All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1064Open in IMG/M
3300006737|Ga0098037_1201707All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC204P651Open in IMG/M
3300006752|Ga0098048_1022626Not Available2097Open in IMG/M
3300006803|Ga0075467_10359073All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC100P764Open in IMG/M
3300006810|Ga0070754_10263350Not Available784Open in IMG/M
3300006916|Ga0070750_10320114All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → unclassified Pelagivirus → Pelagibacter phage HTVC031P659Open in IMG/M
3300006919|Ga0070746_10088091Not Available1561Open in IMG/M
3300006919|Ga0070746_10483761Not Available546Open in IMG/M
3300006921|Ga0098060_1187996Not Available566Open in IMG/M
3300006922|Ga0098045_1132115Not Available580Open in IMG/M
3300007229|Ga0075468_10111221Not Available858Open in IMG/M
3300007276|Ga0070747_1328586Not Available524Open in IMG/M
3300008217|Ga0114899_1137770Not Available801Open in IMG/M
3300008218|Ga0114904_1004586Not Available5497Open in IMG/M
3300008219|Ga0114905_1046634All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC204P1607Open in IMG/M
3300008220|Ga0114910_1058535Not Available1217Open in IMG/M
3300009428|Ga0114915_1183460Not Available582Open in IMG/M
3300009603|Ga0114911_1012432All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C1653016Open in IMG/M
3300010148|Ga0098043_1063937Not Available1108Open in IMG/M
3300010150|Ga0098056_1014482Not Available2856Open in IMG/M
3300011013|Ga0114934_10120851All Organisms → Viruses → Predicted Viral1258Open in IMG/M
3300012919|Ga0160422_10537668Not Available737Open in IMG/M
3300012920|Ga0160423_10461338All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM24-C165865Open in IMG/M
3300012953|Ga0163179_10472260All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC203P1032Open in IMG/M
3300017706|Ga0181377_1048225All Organisms → Viruses → environmental samples → uncultured Mediterranean phage823Open in IMG/M
3300017708|Ga0181369_1100911Not Available600Open in IMG/M
3300017738|Ga0181428_1155172Not Available535Open in IMG/M
3300017755|Ga0181411_1177484Not Available605Open in IMG/M
3300017757|Ga0181420_1080124Not Available1019Open in IMG/M
3300017757|Ga0181420_1101938Not Available882Open in IMG/M
3300017764|Ga0181385_1030220Not Available1716Open in IMG/M
3300017770|Ga0187217_1163142Not Available744Open in IMG/M
3300017773|Ga0181386_1020367All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2214Open in IMG/M
3300017775|Ga0181432_1092539All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium894Open in IMG/M
3300017781|Ga0181423_1350224Not Available538Open in IMG/M
3300018416|Ga0181553_10293639All Organisms → Viruses → environmental samples → uncultured Mediterranean phage907Open in IMG/M
3300020175|Ga0206124_10053229All Organisms → cellular organisms → Bacteria1771Open in IMG/M
3300020266|Ga0211519_1052335Not Available794Open in IMG/M
3300020422|Ga0211702_10094163Not Available845Open in IMG/M
3300021365|Ga0206123_10065879All Organisms → cellular organisms → Bacteria1815Open in IMG/M
3300021959|Ga0222716_10091983All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → unclassified Pelagivirus → Pelagibacter phage HTVC031P2064Open in IMG/M
3300021960|Ga0222715_10648240Not Available538Open in IMG/M
3300022053|Ga0212030_1010185Not Available1158Open in IMG/M
3300022068|Ga0212021_1021912All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC204P1201Open in IMG/M
3300022068|Ga0212021_1101235Not Available591Open in IMG/M
3300022074|Ga0224906_1122973All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC203P749Open in IMG/M
3300022925|Ga0255773_10375559All Organisms → Viruses → environmental samples → uncultured Mediterranean phage549Open in IMG/M
(restricted) 3300024052|Ga0255050_10073471All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC204P759Open in IMG/M
3300025070|Ga0208667_1023369All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage Lederberg EXVC029P1175Open in IMG/M
3300025071|Ga0207896_1013854Not Available1427Open in IMG/M
3300025079|Ga0207890_1008072Not Available2295Open in IMG/M
3300025086|Ga0208157_1021386All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1963Open in IMG/M
3300025086|Ga0208157_1065711All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage Lederberg EXVC029P936Open in IMG/M
3300025098|Ga0208434_1101933Not Available560Open in IMG/M
3300025103|Ga0208013_1164716All Organisms → Viruses → environmental samples → uncultured Mediterranean phage521Open in IMG/M
3300025120|Ga0209535_1064717All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1470Open in IMG/M
3300025120|Ga0209535_1079720All Organisms → Viruses → Predicted Viral1248Open in IMG/M
3300025120|Ga0209535_1147518Not Available748Open in IMG/M
3300025127|Ga0209348_1095675Not Available929Open in IMG/M
3300025128|Ga0208919_1176669All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC204P650Open in IMG/M
3300025132|Ga0209232_1122867Not Available855Open in IMG/M
3300025133|Ga0208299_1180032All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium641Open in IMG/M
3300025137|Ga0209336_10129247Not Available685Open in IMG/M
3300025137|Ga0209336_10159506Not Available590Open in IMG/M
3300025138|Ga0209634_1257367All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage Lederberg EXVC029P628Open in IMG/M
3300025264|Ga0208029_1107145Not Available500Open in IMG/M
3300025268|Ga0207894_1000084Not Available36356Open in IMG/M
3300025300|Ga0208181_1106536Not Available534Open in IMG/M
3300025645|Ga0208643_1045954Not Available1362Open in IMG/M
3300025652|Ga0208134_1018002All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2711Open in IMG/M
3300025674|Ga0208162_1147401Not Available648Open in IMG/M
3300025722|Ga0209660_1258908Not Available530Open in IMG/M
3300025759|Ga0208899_1076932Not Available1314Open in IMG/M
3300025806|Ga0208545_1162359Not Available524Open in IMG/M
3300025897|Ga0209425_10576918Not Available502Open in IMG/M
3300028022|Ga0256382_1013136All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC100P1637Open in IMG/M
3300028198|Ga0257121_1061101Not Available1501Open in IMG/M
3300029319|Ga0183748_1121650All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300032277|Ga0316202_10313904Not Available730Open in IMG/M
3300032373|Ga0316204_11034914Not Available578Open in IMG/M
3300032820|Ga0310342_100980464Not Available990Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine33.98%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous15.53%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean9.71%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater9.71%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine6.80%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.91%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.91%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat1.94%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.94%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh1.94%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.94%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.94%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.97%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.97%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.97%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.97%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.97%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.97%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.97%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.97%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.97%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001355Pelagic Microbial community sample from North Sea - COGITO 998_met_08EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300001740Marine viral communities from the Deep Pacific Ocean - MSP-114EnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300002483Marine viral communities from the Pacific Ocean - ETNP_6_30EnvironmentalOpen in IMG/M
3300003478Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNAEnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300005747Seawater microbial communities from Vineyard Sound, MA, USA - control T14EnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020266Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX556082-ERR598951)EnvironmentalOpen in IMG/M
3300020422Marine prokaryotic communities collected during Tara Oceans survey from station TARA_076 - TARA_B100000513 (ERX555999-ERR599126)EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022925Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaGEnvironmentalOpen in IMG/M
3300024052 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_5EnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025071Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)EnvironmentalOpen in IMG/M
3300025079Marine viral communities from the Pacific Ocean - LP-48 (SPAdes)EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025268Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)EnvironmentalOpen in IMG/M
3300025300Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025722Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025897Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300028198Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_100EnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300032373Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1005880233300000101MarineMNKVDIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEKATSQLINKANEIS*
DelMOSum2010_1009397823300000101MarineMNKVNIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS*
DelMOSum2011_1009488223300000115MarineMNKVNIIASIVEGETLXDFGLLMEDTEFKXLLKAVINLPXEEATSQLINKANEIS*
DelMOSum2011_1012393533300000115MarineMNKVNIIASIVEGETLCDFGLLMEDTDFKNLLKAVINLPLEEATSQLINKANEIS*
DelMOSpr2010_1015519613300000116MarineNIIASIVEGETLCDFGLLMEDTDFKNLLKAVINLPLEEATSQLINKANEIS*
DelMOWin2010_1004505963300000117MarineMNKINIIASIVEGETLCDFGLLMEDTDFKNLLKSVINLPIEEATSQLINKANEIS*
DelMOWin2010_1017942633300000117MarineASIVEGETLCDFGLLMEDTDFKNLLKAVINLPLEEATSQLINKANEIS*
JGI20158J14315_1016050323300001355Pelagic MarineMNKVNIIASIVEGETLCDFGLLMEXTDFKNLLKAVINLPLEEATSQLIXKANEIS*
JGI24003J15210_1014488733300001460MarineASIVEGETLCDFGLLMEDTDFKNLLKAVINLPIEEATSQLINKANEIS*
JGI24004J15324_1002811563300001472MarineMNKVNIIASIVEGETLCDFGLLMEDTEFKDLLKTVINLPLEEATSQLINKANEIS*
JGI24004J15324_1013855113300001472MarineRKQMNKVNIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEQATSQLINKANEIS*
JGI24004J15324_1014731823300001472MarineVEGETLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS*
JGI24005J15628_1003884913300001589MarineSIVEGETLCDFGLLMEDTEFKDLLKTVINLPLEEATSQLINKANEIS*
JGI24656J20076_1000093153300001740Deep OceanMNKLNIIASIVEGETLCNFNGLMEDLEFKKLLKAVINLPLEEATSQLINKANEIS*
JGI25127J35165_106786813300002482MarineMNKYNVIASWVEGETSCSWDCLMEDENFVKLLKAVINLPIEEATNQLIKKANEIS*
JGI25132J35274_106597723300002483MarineMTKYNMIASWVEGETLCAWDCLMEDEDFVRLLKAVINLPIEEATSQLIKKANEIS*
JGI26238J51125_104894523300003478MarineMNKINIIASIVEGETLCNFGLLMEDTDFKDLLKAVINLPIEEATSQLINKANKIS*
Ga0066223_121137213300004461MarineMNKINIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEQATSQLI
Ga0076924_110633923300005747MarineMNKVNIITSIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEKATSQLINKANEIS*
Ga0075462_1006198233300006027AqueousMNKVNIIASIVEGETLCDFGLLMEDTDFKNLLKAVINLPIEEATSQLINKANEIS*
Ga0098038_115072833300006735MarineMNKVNIIASIVEGKTLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANEI
Ga0098037_103168063300006737MarineMNKVNIIASIVEGKTLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS*
Ga0098037_109092643300006737MarineMNKLNIIASIVEGETCCCFYSLMEDESFKKLVKKVINLPLEEATSQLINKANEIS*
Ga0098037_120170713300006737MarineMTKYNMIASWVEGETLCSWDCLMEDEDFVRLLKAVINLPIEEATSQLIKKANEIS*
Ga0098048_102262643300006752MarineMNKLNIIASIVEGETLCDFGLLMEDTEFKDLLKSVINLPIDEATSQLINKANEIS*
Ga0075467_1035907333300006803AqueousMNKVNIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEQATSQLINKANEIS*
Ga0070754_1026335023300006810AqueousMNKVNIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEKATSQLINKANEIS*
Ga0070750_1032011423300006916AqueousMNKLNIIASIVEGKTLCDFGLLMEDTEFKDLLKAVINLPLEEATSQLINKANEIS*
Ga0070746_1008809143300006919AqueousMKKINIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS*
Ga0070746_1048376133300006919AqueousMNKVNIITSIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEKATSQLI
Ga0098060_118799633300006921MarineASIVEGETLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS*
Ga0098045_113211513300006922MarineMNKLNIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLI
Ga0075468_1011122153300007229AqueousMNKVNIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEQATSQ
Ga0070747_132858633300007276AqueousMNKVNIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEQATS
Ga0114899_113777013300008217Deep OceanMNKFNIIASIVEGETLCNFGSLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS*
Ga0114904_1004586173300008218Deep OceanASIVEGETLCNFGSLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS*
Ga0114905_104663453300008219Deep OceanMNKFNIIASIVEGETLCNFGSLMEDTEFKNLLKAVINLPLEEATSQLIN
Ga0114910_105853553300008220Deep OceanHIDQKGGIMNKINIIASIVEGETLCNFSSLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS*
Ga0114915_118346013300009428Deep OceanMNKVNIIASIVEGETLCDFGLLMEYTEFKDLLKAVINLPLEEATSQLINKANEIS*
Ga0114911_101243213300009603Deep OceanMNKLNIIASIVEGETLCNFGSLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS*
Ga0098043_106393733300010148MarineMNKLNMIASIVEGETCCCFYSLMEDEGFKELVKKVINLPLEEATSQLINKANEIS*
Ga0098056_101448273300010150MarineMNKVNIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPIEEATSQLINKANEIS*
Ga0114934_1012085133300011013Deep SubsurfaceMNKINIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPLEEATSQLINKANEIS*
Ga0160422_1053766823300012919SeawaterMNKYNMIASIVEGETLCDFNILMEDEDFIRLLKAVINLPIEEATHQLIKKANDIS*
Ga0160423_1046133833300012920Surface SeawaterMNKLNIIASIVEGETCCCFNSLMEDEGFKELVKKVINLPLEEATSQLINKANEIS*
Ga0163179_1047226033300012953SeawaterMNKINIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS*
Ga0181377_104822533300017706MarineMNKLNIIASIVEGETLCNFNCLMEDLEFKKLLKAVINLPLEEATSQLI
Ga0181369_110091113300017708MarineMNKLDIIASIVEGETCCCFYSLMEDESFKKLVKKVINLPLEEATPFS
Ga0181428_115517233300017738SeawaterMNKANVIASIVEGETLCNFNELMENTDFKNLFKDVVNLPIDKATDKLINKANEIS
Ga0181411_117748423300017755SeawaterMNKLNIIASIVEGETLCDFGLLMEDTEFKNLLKTVIDLPIDEATSQLINKANEIS
Ga0181420_108012423300017757SeawaterMNKVNIIASIVEGETLCNFSLLMENTEFKDLLKSVINLPLEEATSQLIKKANEIS
Ga0181420_110193813300017757SeawaterNQQKETMNKVNIIASIVEGETLCDFGLLMEDTDFKNLLKAVINLPLEEATSQLINKANEI
Ga0181385_103022053300017764SeawaterMNKINIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEQATMETK
Ga0187217_116314223300017770SeawaterMNKVNIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEQATSQLINKANEIS
Ga0181386_102036743300017773SeawaterMNKVNIIASIVEGETFCDFGLLMEDTEFKNLLKAVINLPLEEATSQLIN
Ga0181432_109253913300017775SeawaterMNKVNIIASIVEGETFCNFGLLMEDTEFKKLLKAVINLPLEEATSQLINRANEIS
Ga0181423_135022413300017781SeawaterIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPIEQATSQLINKANEIS
Ga0181553_1029363923300018416Salt MarshMNKLNIIASIVEGETCCCFYSLMEDEGFKELVKKVINLPLEEATSQLINKANEIS
Ga0206124_1005322943300020175SeawaterMNKVNIIASIVEGETLCDFGLLMEDTDFKNLLKAVINLPLEEATSQLIKKANEIS
Ga0211519_105233533300020266MarineMNKVNIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS
Ga0211702_1009416323300020422MarineMNKYNMIASIVEGETLCDFNILMEDEDFIRLLKAVINLPIEEATSQLIKKANEIS
Ga0206123_1006587923300021365SeawaterMNKVNIIASIVEGETLCDFGLLMEDTDFKNLLKAVINLPLEEATSQLINKANEIS
Ga0222716_1009198333300021959Estuarine WaterMNKLNIITSIVEGETLCDFNSLMEDTEFKKLLKAVINLPLEEATSQLINKANEIS
Ga0222715_1064824013300021960Estuarine WaterMNKINIIASIVEGETLCDFGLLMEDTDFKDLLKAVINLPIEEAT
Ga0212030_101018523300022053AqueousMNKINIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS
Ga0212021_102191223300022068AqueousMNKVNIIASIVEGETLCDFGLLMEDTDFKNLLKAVINLPIEEATSQLINKANEIS
Ga0212021_110123533300022068AqueousMNKVNIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEQATSQL
Ga0224906_112297323300022074SeawaterMNKVNIIASIVEGETFCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS
Ga0255773_1037555923300022925Salt MarshMVLYCILSITNRKVYMNKLNIIASIVEGETCCCFYSLMEDEGFKELVKKVINLPLEEATSQLINKANEIS
(restricted) Ga0255050_1007347123300024052SeawaterMNKLNIIASIVEGETLCNFNSLMEDLEFKKLLKAVINLPLEEATSQLINKANEIS
Ga0208667_102336943300025070MarineMNKVNIIASIVEGETLCDFGLLMEDTEFKDLLKSVINLPIDEATSQLINKANEIS
Ga0207896_101385413300025071MarineMNKVNIIASIVEGETLCDFGLLMEDTEFKDLLKTVINLPLEEATSQLINKANEIS
Ga0207890_100807223300025079MarineMKKVNIIASIVEGETLCDFGLLMEDTEFKDLLKTVINLPLEEATSQLINKANEIS
Ga0208157_102138643300025086MarineMNKVNIIASIVEGKTLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS
Ga0208157_106571143300025086MarineMNKVNIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANE
Ga0208434_110193323300025098MarineMNKVNIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPIEEATSQLINKANEIS
Ga0208013_116471613300025103MarineMNKLNIIASIVEGETLCNFGSLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS
Ga0209535_106471723300025120MarineMNKINIIASIVEGETLCDFGLLMEDIEFKDLLKAVINLPLEEATSQLINKANEIS
Ga0209535_107972013300025120MarineKKTMNKVNIIASIVEGETLCDFGLLMEDTDFKNLLKAVINLPLEEATSQLINKANEIS
Ga0209535_114751833300025120MarineTMNKVNIIASIVEGETLCDFGLLMEDTDFKNLLKAVINLPIEEATSQLINKANEIS
Ga0209348_109567513300025127MarineMNKYNVIASWVEGETSCSWDCLMEDENFVKLLKAVINLPIEEATNQLIKKANEIS
Ga0208919_117666923300025128MarineMTKYNMIASWVEGETLCSWDCLMEDEDFVRLLKAVINLPIEEATSQLIKKANEIS
Ga0209232_112286733300025132MarineMNKINIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPLEEATSQLINKANEIS
Ga0208299_118003223300025133MarineMNKVNIIASIVEGETLCNFGLLMEDTEFKKLLKAVINLPLEEATSQLINRANEIS
Ga0209336_1012924713300025137MarineIASIVEGETLCDFGLLMEDTDFKNLLKAVINLPIEEATSQLINKANEIS
Ga0209336_1015950613300025137MarineERKQMNKVNIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS
Ga0209634_125736713300025138MarineMNKVNIIASIVEGETLCDFGLLMEDTDFKNLLKAVINLPLEEATSQLINK
Ga0208029_110714523300025264Deep OceanMNKFNIIASIVEGETLCNFGSLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS
Ga0207894_1000084213300025268Deep OceanMNKLNIIASIVEGETLCNFNGLMEDLEFKKLLKAVINLPLEEATSQLINKANEIS
Ga0208181_110653613300025300Deep OceanASIVEGETLCNFGSLMEDTEFKNLLKAVINLPLEEATSQLINKANEIS
Ga0208643_104595413300025645AqueousMNKVNIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEQATSQLINK
Ga0208134_101800233300025652AqueousMNKVDIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEKATSQLINKANEIS
Ga0208162_114740113300025674AqueousMNKINIIASIVEGETLCDFGLLMEDTDFKNLLKAVINLPLEEATSQLINKANEIS
Ga0209660_125890823300025722MarineMPNYRHIYLLTLINXKETMNKINIIASIVEGETLCDFGLLMEDTDFKDLLKAVINLPIEEATSQLINKANKIS
Ga0208899_107693213300025759AqueousMKKINIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKAN
Ga0208545_116235913300025806AqueousTNERKQMNKVDIIASIVEGETLCDFGLLMEDTEFKDLLKAVINLPIEKATSQLINKANEI
Ga0209425_1057691813300025897Pelagic MarineYLLTLINXKETMNKVNIIASIVEGETLCDFGLLMENTDFKNLLKAVINLPIEEATSQLINKANKIS
Ga0256382_101313643300028022SeawaterMSLDKMNKGDIIVSLVEGATTCSFYLLMEDTEFRNLLIAVIDLPLEEATSQLISKANEIS
Ga0257121_106110133300028198MarineMNKINIIASIVEGETLCNFGLLMEDTDFKDLLKAVINLPIEEATSQLINKANKIS
Ga0183748_112165013300029319MarineMNKYNMIASWVEGETLCSWDCLMEDEDFVKLLKAVINLPIKEATSQLIKKANEIS
Ga0316202_1031390423300032277Microbial MatMNKINIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPIEQATSQLINKANEIS
Ga0316204_1103491423300032373Microbial MatMNKVNIIASIVEGETLCDFGLLMEDTEFKNLLKAVINLPLEEATSQLINKA
Ga0310342_10098046423300032820SeawaterMSKLNIIASIVEGETLCNFNSLMENLEFKKLLKAVINLPLDEATSQLINKANEIS


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