Metagenome / Metatranscriptome Family F099236

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099236
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	110 residues
Representative Sequence	MGRRRTICTRDLYIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Number of Associated Samples	81
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.11 %
% of genes near scaffold ends (potentially truncated)	67.96 %
% of genes from short scaffolds (< 2000 bps)	90.29 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.456 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.689 % of family members)
Environment Ontology (ENVO)	Unclassified (59.223 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.427 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.67% β-sheet: 0.00% Coil/Unstructured: 30.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF04519	Bactofilin	12.62
PF04185	Phosphoesterase	6.80
PF00589	Phage_integrase	5.83
PF04392	ABC_sub_bind	3.88
PF02518	HATPase_c	2.91
PF01522	Polysacc_deac_1	0.97
PF00072	Response_reg	0.97
PF13493	DUF4118	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	12.62
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	6.80
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.88
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
All Organisms	root	All Organisms	48.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
cellular organisms	root	All Organisms → cellular organisms	48.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.07 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000650\|AP72_2010_repI_A1DRAFT_1015125	Not Available	640	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1027360	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1059856	Not Available	675	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1058044	Not Available	607	Open in IMG/M
3300004463\|Ga0063356_103084849	Not Available	718	Open in IMG/M
3300004633\|Ga0066395_10473639	Not Available	717	Open in IMG/M
3300005332\|Ga0066388_101571456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1155	Open in IMG/M
3300005332\|Ga0066388_102850828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	883	Open in IMG/M
3300005332\|Ga0066388_106345231	Not Available	596	Open in IMG/M
3300005355\|Ga0070671_101150724	Not Available	682	Open in IMG/M
3300005546\|Ga0070696_100327969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1180	Open in IMG/M
3300005764\|Ga0066903_103443248	Not Available	853	Open in IMG/M
3300006603\|Ga0074064_11757802	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300010046\|Ga0126384_10273139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1377	Open in IMG/M
3300010046\|Ga0126384_10644380	All Organisms → cellular organisms → Bacteria → Proteobacteria	933	Open in IMG/M
3300010048\|Ga0126373_11470007	Not Available	747	Open in IMG/M
3300010359\|Ga0126376_10297624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1401	Open in IMG/M
3300010360\|Ga0126372_10775069	Not Available	947	Open in IMG/M
3300010361\|Ga0126378_11496519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300010366\|Ga0126379_11503228	Not Available	779	Open in IMG/M
3300010366\|Ga0126379_12877117	Not Available	576	Open in IMG/M
3300010398\|Ga0126383_10396105	Not Available	1416	Open in IMG/M
3300010398\|Ga0126383_12708333	Not Available	578	Open in IMG/M
3300010399\|Ga0134127_12247270	Not Available	625	Open in IMG/M
3300010400\|Ga0134122_10326936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1326	Open in IMG/M
3300010863\|Ga0124850_1052259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1278	Open in IMG/M
3300010868\|Ga0124844_1108902	Not Available	1055	Open in IMG/M
3300012955\|Ga0164298_11681371	Not Available	503	Open in IMG/M
3300012960\|Ga0164301_10223900	Not Available	1217	Open in IMG/M
3300012971\|Ga0126369_10423944	Not Available	1374	Open in IMG/M
3300012985\|Ga0164308_10878612	Not Available	788	Open in IMG/M
3300012985\|Ga0164308_10908654	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300012989\|Ga0164305_11031784	Not Available	701	Open in IMG/M
3300016270\|Ga0182036_11298546	Not Available	607	Open in IMG/M
3300016319\|Ga0182033_10284447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1358	Open in IMG/M
3300016319\|Ga0182033_10789640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300016357\|Ga0182032_10125248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1860	Open in IMG/M
3300016371\|Ga0182034_10049551	All Organisms → cellular organisms → Bacteria	2765	Open in IMG/M
3300016404\|Ga0182037_10037951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3123	Open in IMG/M
3300020581\|Ga0210399_11256929	Not Available	585	Open in IMG/M
3300021078\|Ga0210381_10014506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1988	Open in IMG/M
3300021432\|Ga0210384_10084546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2853	Open in IMG/M
3300021560\|Ga0126371_10258243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1859	Open in IMG/M
3300021560\|Ga0126371_10374898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1561	Open in IMG/M
3300021560\|Ga0126371_10725711	Not Available	1141	Open in IMG/M
3300027873\|Ga0209814_10403835	Not Available	601	Open in IMG/M
3300027874\|Ga0209465_10152651	Not Available	1147	Open in IMG/M
3300031543\|Ga0318516_10501562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300031545\|Ga0318541_10091447	All Organisms → cellular organisms → Bacteria → Proteobacteria	1622	Open in IMG/M
3300031545\|Ga0318541_10115376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1454	Open in IMG/M
3300031549\|Ga0318571_10111261	Not Available	908	Open in IMG/M
3300031561\|Ga0318528_10752039	Not Available	521	Open in IMG/M
3300031573\|Ga0310915_10055389	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300031573\|Ga0310915_10274193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1189	Open in IMG/M
3300031573\|Ga0310915_10489972	Not Available	873	Open in IMG/M
3300031668\|Ga0318542_10093567	Not Available	1441	Open in IMG/M
3300031668\|Ga0318542_10174516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1076	Open in IMG/M
3300031679\|Ga0318561_10322068	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300031679\|Ga0318561_10629385	Not Available	590	Open in IMG/M
3300031682\|Ga0318560_10077060	Not Available	1693	Open in IMG/M
3300031719\|Ga0306917_10401154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1070	Open in IMG/M
3300031719\|Ga0306917_11246331	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300031736\|Ga0318501_10054274	Not Available	1885	Open in IMG/M
3300031748\|Ga0318492_10041761	All Organisms → cellular organisms → Bacteria → Proteobacteria	2110	Open in IMG/M
3300031770\|Ga0318521_10170306	Not Available	1245	Open in IMG/M
3300031770\|Ga0318521_10559169	Not Available	690	Open in IMG/M
3300031771\|Ga0318546_10313052	Not Available	1088	Open in IMG/M
3300031778\|Ga0318498_10054722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1775	Open in IMG/M
3300031780\|Ga0318508_1043587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1170	Open in IMG/M
3300031781\|Ga0318547_10660550	Not Available	649	Open in IMG/M
3300031781\|Ga0318547_10703171	Not Available	628	Open in IMG/M
3300031792\|Ga0318529_10220283	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300031794\|Ga0318503_10169298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300031799\|Ga0318565_10620589	Not Available	519	Open in IMG/M
3300031805\|Ga0318497_10354045	Not Available	820	Open in IMG/M
3300031819\|Ga0318568_10182550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1291	Open in IMG/M
3300031879\|Ga0306919_10038135	All Organisms → cellular organisms → Bacteria	3094	Open in IMG/M
3300031890\|Ga0306925_10093737	All Organisms → cellular organisms → Bacteria	3190	Open in IMG/M
3300031890\|Ga0306925_11168000	Not Available	773	Open in IMG/M
3300031897\|Ga0318520_10232136	Not Available	1096	Open in IMG/M
3300031910\|Ga0306923_10765227	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300031910\|Ga0306923_11748969	Not Available	640	Open in IMG/M
3300031912\|Ga0306921_10035562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5592	Open in IMG/M
3300031941\|Ga0310912_10038154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3314	Open in IMG/M
3300031942\|Ga0310916_10200544	Not Available	1669	Open in IMG/M
3300031942\|Ga0310916_10506232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1028	Open in IMG/M
3300031942\|Ga0310916_11030227	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300031945\|Ga0310913_11256034	Not Available	514	Open in IMG/M
3300031947\|Ga0310909_11011439	Not Available	678	Open in IMG/M
3300031954\|Ga0306926_11981474	Not Available	655	Open in IMG/M
3300031959\|Ga0318530_10061313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1438	Open in IMG/M
3300032001\|Ga0306922_10532253	Not Available	1250	Open in IMG/M
3300032025\|Ga0318507_10259403	Not Available	754	Open in IMG/M
3300032043\|Ga0318556_10324778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	804	Open in IMG/M
3300032060\|Ga0318505_10463388	Not Available	599	Open in IMG/M
3300032065\|Ga0318513_10383583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300032089\|Ga0318525_10317784	Not Available	799	Open in IMG/M
3300032090\|Ga0318518_10047949	All Organisms → cellular organisms → Bacteria → Proteobacteria	2022	Open in IMG/M
3300032205\|Ga0307472_101820879	Not Available	605	Open in IMG/M
3300032261\|Ga0306920_100555903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1700	Open in IMG/M
3300032261\|Ga0306920_101359498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1019	Open in IMG/M
3300033289\|Ga0310914_10481989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1122	Open in IMG/M
3300033290\|Ga0318519_10917989	Not Available	541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.09%
Host-Associated	Host-Associated	2.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.12%
Plants	Host-Associated → Plants	2.91%
Aquatic	Environmental → Aquatic	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.38%
Loam	Environmental → Terrestrial → Soil → Loam	8.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.94%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000650	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A1	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A1DRAFT_10151252	3300000650	Forest Soil	MGRRPTICTRDLYIGAINAAGHADIRLCASFGCGLERCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEKEGWVVSALVDGIEPPKRLWHMRKQAKETFGL*
AP72_2010_repI_A10DRAFT_10273602	3300000651	Forest Soil	RDLYIGAINAAGHADIRLCASFGCGLERCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEKEGWVVSALVDGIEPPKRLWHMRKQAKETFGL*
AF_2010_repII_A100DRAFT_10598561	3300000655	Forest Soil	MGRRPTICTRDLYIGAINAAGHADIRLCASFGCGLERCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIQPPKRLWHLRNQAKETFGL*
AP72_2010_repI_A001DRAFT_10580442	3300000893	Forest Soil	MGRRPTICTRDLYIGAINAAGHADIRLCASFGCGLERCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEKEGWVVSALVDGIEPPKRLWXMRKQAKETFGL*
Ga0063356_1030848491	3300004463	Arabidopsis Thaliana Rhizosphere	MGARPTICTRDLYIGAMAGAGHADIRLCASFGCGFACCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL*
Ga0066395_104736391	3300004633	Tropical Forest Soil	MGRRPTICTRDLCIGAINAARHADIRLCASIGCGLARCWNDYDMSTLADNAMLVVRALTRAKKDGLSFYELLQATRLAAKYLPGILHRLEQQGWVVSALVDGIEPPKRLWHLRKQ
Ga0066388_1015714561	3300005332	Tropical Forest Soil	GHADIRLCASFGCGLACCWNDYHMSTLADNAMLVVRALTRANKDGLSFYELQQATRLAAEYLPGILHMLEQKDWVVSALVDGIEPPKRLWHLRKQATETFGL*
Ga0066388_1028508281	3300005332	Tropical Forest Soil	MGASSNHCIRDLCIGAINAVGPADIRLCASFGCGLARCWKDCHMSTLADNETLVVRALTHAKKDGLSFYELLQATRLAADYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETF
Ga0066388_1063452312	3300005332	Tropical Forest Soil	MGRRPTICTRDLHIGTINAAGHADIRLCASFGCGLARCWNDYHMSALADNAMLAVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL*
Ga0070671_1011507241	3300005355	Switchgrass Rhizosphere	NHLHPRSLYRRINGAGHADIRLCASFGCGLACCWNGYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIQPPKRLWHLRKQAKETFGL*
Ga0070696_1003279692	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	HLCIGRINGASTPRHTPLASFGCGLARCWNDNHMSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIQPPKRLWHLRKQAKETFGL*
Ga0066903_1034432482	3300005764	Tropical Forest Soil	MAASNHLHPRAGHAVIRLCASFGCGFTCCWNDYQMSTLADNAMLVARALTRAKKDGLSFYELYQATRLAAAYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKET
Ga0074064_117578021	3300006603	Soil	INGAGHADIRHCASFGCRLACCWNEYHMSTLADNAMLVVRALTRAKKNGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL*
Ga0126384_102731393	3300010046	Tropical Forest Soil	MGRRPTICTRDLYIGAINAAGHADIRLCASFGCGLERCWNDYHMSTLADNAMLVMRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEKEG
Ga0126384_106443802	3300010046	Tropical Forest Soil	MGRRPTICTRDLHIGTINAAAHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTHAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALV
Ga0126373_114700071	3300010048	Tropical Forest Soil	CIGAINAAGHADIRLCASFGCGLARCWKDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWAVSALVDGIEPSKRLWHLRKQAKETFGL*
Ga0126376_102976242	3300010359	Tropical Forest Soil	MGRRPTICARDLYIGAINSAGHADIRLCAAFGCGLARCWNDYDMSTLADNAMLVVRALTRAKKDGLSFYELLQATRLAAKYLPGILHRLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL*
Ga0126372_107750692	3300010360	Tropical Forest Soil	MGASSNHLHIGAINGAGTPRHTPLASFGCGLARCWNDYHMSTLADNAMMVVRALTRAKKDGLSFYELLQATRLAAEYLPGILHRLEQQGWVVSALVDGIEPPKRLWHLRKQATETFGL*
Ga0126378_114965191	3300010361	Tropical Forest Soil	MGRRPTICTGDLCIGAINAARHADIRLCASIGCGLARCWNDYDMSTLADNAMLVARALTRAKKDGLSFYELLQATGLAAEYLPGILHRLEQQGWVVSALVDGIEPPKRLWHLRKQAKETF
Ga0126379_115032281	3300010366	Tropical Forest Soil	MGRRPTICTRDLHIGTINAAGHADIRLCASFGWGLARCWNDYHMSTLADNAMLVVRALTHGKKDGLSFYELQQATRIAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAK
Ga0126379_128771171	3300010366	Tropical Forest Soil	MGRRPTICTGDLCIGAINAARHADIRLCASIGCGLARCWNDYDMSTLADNAMLVVRALTRAKKDGLSFYELLQATGLAAEYLPGILHRLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL*
Ga0126383_103961054	3300010398	Tropical Forest Soil	GRRPTICTRDLYIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELLQATRLAAEYLPGILHRLEQQAWVVSALVDGIEPPKRLWHLRKQAKETFGL*
Ga0126383_127083331	3300010398	Tropical Forest Soil	MGRRPTICTRDLHIGTINAAGHADIRLCASFGWGLARCWNDYHMSTLADNAMLVVRALTHGKKDGLSFYELQQATRIAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWH
Ga0134127_122472701	3300010399	Terrestrial Soil	IGAINGAGHADIRLCSSFGCGLACCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIQPPKRLWHLRKQAKETFGL*
Ga0134122_103269361	3300010400	Terrestrial Soil	LYIGAIADAGHADISLCASFGCGLACCWNGYHMSTLADNAMLVVQTLTRAKKDGLSFYEFQQATRLAAASLPGILHMLEQQGWVVSALVDGIQPPKRLWHLRKQAKETFGL*
Ga0124850_10522593	3300010863	Tropical Forest Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDHHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL*
Ga0124844_11089021	3300010868	Tropical Forest Soil	TPTYASVRHADIRLCASIGCGLARCWNDYDMSTLADNAMLVARALTRAKKDGLSFYELLQATGLAAEYLPGILHRLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL*
Ga0164298_116813711	3300012955	Soil	MGARPTICTRDLYIGAIADAGHADISLCASFGCGLACCWNEYHMSTLADNAMLVVRALTRAKKDGLSFYELHQATRLAAGHLPGILH
Ga0164301_102239001	3300012960	Soil	MGASSNHLHRDLSIGRINGASTPRHTPLASFGCGLARCWNDNHMSTLADNTILVARALTRAKKDGLSFYELQQATRLAAEYLPGLLHMLEQQGWVVSALVDGIQRPKQR*
Ga0126369_104239444	3300012971	Tropical Forest Soil	MGRRPTICTRDLHIGTINAAGHADIRLCASFGWGLARCWNDYHMSTLADNAMLVVRALTHGKKDGLSFYELQQATRIAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL*
Ga0164308_108786121	3300012985	Soil	MGASSNHLHRDLSIGRINGASTPRHTPLASFGCGLARCWNDNHMSTLADNTMLAARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIQPPKRLWHLRKQAKETFGL*
Ga0164308_109086543	3300012985	Soil	NGGVVQPSAPAIFISAAINGAGHAEIRLCASFGCGLACCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAGHLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKRAKETFER*
Ga0164305_110317841	3300012989	Soil	MGASSNHLHRDLSIGRINGASTPRHTPLASFGCGLARCWNDNHMSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL*
Ga0182036_112985461	3300016270	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDHHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVPALVDGI
Ga0182033_102844471	3300016319	Soil	MGRRPTICTRDLHIGTINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLAVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGW
Ga0182033_107896401	3300016319	Soil	MGRRRTICTRDLYIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSAL
Ga0182032_101252481	3300016357	Soil	WGRRPTICTRDLYIGAINAAGHADIRLCASFGCGLARWNDYHMSTLADNAMLVARALTRAKKDGLSFYELQQATGLAAEHLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFG
Ga0182034_100495511	3300016371	Soil	PTICTRDLYIGAINAAGHADIRLCASFGCGLARWNDYHMSTLADNAMLVARALTRAKKDGLSFYELQQATGLAAEHLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0182037_100379516	3300016404	Soil	DLYIGAINAAGHADIRLCASFGCGLARWNDYHMSTLADNAMLVARALTRAKKDGLSFYELQQATGLAAEHLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0210399_112569291	3300020581	Soil	TPRHTPLASFGCGLARCWNDNHMSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIQPPKRLWHLRKQAKETFGL
Ga0210381_100145062	3300021078	Groundwater Sediment	MGATSDHLHPRSSINGAGHADIRHCASFGCRLACCWNEYHMSTLADNAMLVVRALTRAKKDGLSFYELLQATRQAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKRAKETFGL
Ga0210384_100845463	3300021432	Soil	MGARPTICTRDLYIGAIAGAGHADISLCASFGCGLACCWNEYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAGHLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKRAKETFER
Ga0126371_102582433	3300021560	Tropical Forest Soil	MGRRPTICTRDLHIGAINAAGHADIRLCAAFGSGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWAVSALVDGIEPSKRLWHLRKQAKETFGL
Ga0126371_103748985	3300021560	Tropical Forest Soil	MGRRPTICTRDLHIGTINAAGHADIRLCASFGWGLARCWNDYHMSTLADNAMLVVRALTHGKKDGLSFYELQQATRIAAEYLPGILHMLEQQGWVVSALV
Ga0126371_107257112	3300021560	Tropical Forest Soil	MGRRPTICTRDLYIGAINAAGHADIRLCASFGCGLERCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEKEGWVVSALVDGIEPPKRLWHMRKQAKETFGL
Ga0209814_104038351	3300027873	Populus Rhizosphere	MGASSNHLHPRAGHADIRLCASFGCGLAGCWNDYHMSTLADNAMLVVRAFTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0209465_101526511	3300027874	Tropical Forest Soil	MGRRPTICTRDLCIGAINAARHADIRLCASIGCGLARCWNDYDMSTLADNAMLVARALTRAKKDGLSFYELLQATGLAAEYLPGILHRLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0318516_105015622	3300031543	Soil	MGRRRTICTRDLYIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLE
Ga0318541_100914472	3300031545	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDHHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVPALVDGIEPPKRLWHLRKQAKETFGL
Ga0318541_101153762	3300031545	Soil	MGASSNHLHLCASFGCGLACCWNDYHMSTLADNAMLVVRALKRATKDGLSFYELQQATRLAAEYLPGILHTLEQQGWVVSALVDGIEPPKRLWHLRKQATETFGL
Ga0318571_101112611	3300031549	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRVAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFRL
Ga0318528_107520391	3300031561	Soil	MGGVVQPSAPAILCIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVSALVDGI
Ga0310915_100553891	3300031573	Soil	DLYTGAINAAGHADIRLCASFGCGLARWNDYHMSTLADNAMLVARALTRAKKDGLSFYELQQATGLAAEHLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0310915_102741931	3300031573	Soil	MGRRRTICTRDLYIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALV
Ga0310915_104899722	3300031573	Soil	MGRRPTICTRDLHIGTINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLAVRALTRAKKDGLSFYELQQATRLAAEYL
Ga0318542_100935672	3300031668	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVPALVDGIEPPKRLWHLRKQAKETFGL
Ga0318542_101745161	3300031668	Soil	MGRRPTICARDLYNGAINSAGHADIHLCAAFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQG
Ga0318561_103220681	3300031679	Soil	SAGHADIHLCAAFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0318561_106293851	3300031679	Soil	MGGVVQPSAPAILCIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTHAKKDGLSFYELLQATRLAAEYLPGILHRLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0318560_100770604	3300031682	Soil	NAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTHAKKDGLSFYELLQATRLAAEYLPGILHRLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0306917_104011543	3300031719	Soil	NAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELLQATRLAAEYLPGILHRLEQQGWVVSALIDGIEPPKRLWHLRKQAKEAFGL
Ga0306917_112463311	3300031719	Soil	NAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTHAKKDGLSFYELLQATRLAAEYLPGILHRLEQQGWVVSALVDGIEPPKRLWHLRKQAKEKETFGL
Ga0318501_100542741	3300031736	Soil	LQALCQMCLAAGHADIRLCASFGCGLARCWNDHHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVPALVDGIEPPKRLWHLRKQAKETFGL
Ga0318492_100417613	3300031748	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDHHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVPALVDGIEPPKRLWRLRKQAKETFGL
Ga0318521_101703061	3300031770	Soil	LMGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDHHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVPALVDGIEPPKRLWHLRKQAKETFGL
Ga0318521_105591691	3300031770	Soil	MGRRPTICARDLYNGAINSAGHADIHLCAAFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVSALVDGIAPPKRLWHLRKQAKETFGL
Ga0318546_103130521	3300031771	Soil	CTRDLHIGAINAAGHADIRLCASFGCGLARCWNDHHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVPALVDGIEPPKRLWHLRKQAKETFGL
Ga0318498_100547225	3300031778	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDHHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVPALVDS
Ga0318508_10435872	3300031780	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLAVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVPALVDGIEPPKRLWHLRKQAKETFGL
Ga0318547_106605502	3300031781	Soil	MGRRPTICARDLYNGAINSAGHADIHLCAAFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETF
Ga0318547_107031711	3300031781	Soil	MGRRPTICTRDLYIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTHAKKDGLSFYELLQATRLAAEYLPGILHRLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0318529_102202831	3300031792	Soil	RDLYIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVSALVDGIAPPKRLWHLRKQAKETFGL
Ga0318503_101692981	3300031794	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDHHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQ
Ga0318565_106205891	3300031799	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDHHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQG
Ga0318497_103540451	3300031805	Soil	IGAINAVGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTHAKKDGLSFYELLQATRLAAEYLPGILHRLEQRGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0318568_101825502	3300031819	Soil	MGRRRTICTRDLYIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADSAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGIL
Ga0306919_100381351	3300031879	Soil	YIGAINAAGHADIRLCASFGCGLARWNDYHMSTLADNAMLVARALTRAKKDGLSFYELQQATGLAAEHLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0306925_100937375	3300031890	Soil	GAINAAGHADIRLCASFGCGLARWNDYHMSTLADNAMLVARALTRAKKDGLSFYELQQATGLAAEHLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0306925_111680001	3300031890	Soil	MGRRPTICTRDLHIGTINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLAVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVV
Ga0318520_102321361	3300031897	Soil	GHADIRLCASFGCGLACCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0306923_107652273	3300031910	Soil	RPTICTRDLYIGAINAVGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVSALVDGIAPPKRLWHLRKQAKETFGL
Ga0306923_117489692	3300031910	Soil	MGRRPTICARDLYNGAINSAGHADIHLCAAFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVS
Ga0306921_100355623	3300031912	Soil	MGRRRTICTRDLYIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0310912_100381541	3300031941	Soil	MGRRRTICTRDLYIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADSAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALV
Ga0310916_102005443	3300031942	Soil	MGASSNHLHPRSLYRRHHAVGHADIRLCASFGCGLARWWKDYRMSTLADNAMLVARALTRAKKDGLSFYELQQATRLAAKYLPGTLHMLEQQGWVVSALVDGI
Ga0310916_105062322	3300031942	Soil	MGRRRTICTRDLYIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHML
Ga0310916_110302272	3300031942	Soil	EPSALAIFVSAPLMPLGHADIRLCASFGCGLARCWNDYHMNTLADNAMLVVRALTRAKKDGLSFYELLQATRLAAEYLPGILHSLEQQGWVVSALVDGIEPPKRLWHLRKQAKEAFGL
Ga0310913_112560341	3300031945	Soil	TICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRVAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFRL
Ga0310909_110114391	3300031947	Soil	MGRRPTICTRDLCIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTHAKKDGLSFYELLQATRLAAEYLPGILHRLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0306926_119814742	3300031954	Soil	TICTRDLYIGAINGAGHADIRLCASFGCGLACCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELHQATRLAAGHLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKGTLWRA
Ga0318530_100613131	3300031959	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLAVRALTRAKKDGLSFYELQQATRLAAEYLPGIL
Ga0306922_105322532	3300032001	Soil	MGASSNHLHPRSLYRRHHAVGHADIRLCASFGCGLARWWKDYRMSTLADNAMLVARALTRAKKDGLSFYELQQATRLAAKYLPGTLHMLEQQGWVVSALVDGIAPPKRLWHLRKQAKETFGL
Ga0318507_102594031	3300032025	Soil	AAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTHAKKDGLSFYELLQATRLAAEYLPGILHRLEQRGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0318556_103247782	3300032043	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDHHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVPA
Ga0318505_104633882	3300032060	Soil	IRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRVAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFRL
Ga0318513_103835831	3300032065	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRVAAEYLPGIL
Ga0318525_103177841	3300032089	Soil	DLCIGAINAVGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTHAKKDGLSFYELLQATRLAAEYLPGILHMLEQQGWVVSALIDGIEPPKRLWHLRKQAKEAFGL
Ga0318518_100479493	3300032090	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRVAAEYLPGILHMLEQQGWVVPALVDGIEPPKRLWHLRKQAKETFGL
Ga0307472_1018208791	3300032205	Hardwood Forest Soil	HLCIGRINGASTPRHTPLASFGCGLARCWNDNHMSTLADNTMLVARALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIQPPKRLWHLRKQAKETFGL
Ga0306920_1005559034	3300032261	Soil	MGRRPTICTRDLHIGTINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLAVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0306920_1013594983	3300032261	Soil	MGRRPTICTRDLHIGAINAAGHADIRLCASFGCGLARCWNDHHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAEYLPGILHMLEQQGWVVPALVDGIE
Ga0310914_104819893	3300033289	Soil	MGRRPTICARDLYNGAINSAGHADIHLCAAFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVSALVDGIEPPKRLWHLRKQAKETFGL
Ga0318519_109179891	3300033290	Soil	CIGAINAAGHADIRLCASFGCGLARCWNDYHMSTLADNAMLVVRALTRAKKDGLSFYELQQATRLAAKYLPGILHMLEQQGWVVSALVDGIAPPKRLWHLRKQAKETFGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099236

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences