NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F099253

Metagenome / Metatranscriptome Family F099253

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F099253
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 91 residues
Representative Sequence MNRKSLVASFGLVACLAAALSAQAPSSNGKVDQKAVQSIRVKVIGCVAGDAEAGRYILTGAFLSGDDVPSTVGTAGKIGSGRDLS
Number of Associated Samples 95
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 98.04 %
% of genes near scaffold ends (potentially truncated) 89.32 %
% of genes from short scaffolds (< 2000 bps) 92.23 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (72.816 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(26.214 % of family members)
Environment Ontology (ENVO) Unclassified
(49.515 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(43.689 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 16.81%    β-sheet: 0.00%    Coil/Unstructured: 83.19%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF00498FHA 3.88
PF00118Cpn60_TCP1 1.94
PF00011HSP20 1.94
PF00166Cpn10 1.94
PF00072Response_reg 0.97
PF00106adh_short 0.97
PF00936BMC 0.97
PF00672HAMP 0.97
PF00582Usp 0.97
PF13596PAS_10 0.97
PF00034Cytochrom_C 0.97
PF00589Phage_integrase 0.97
PF03486HI0933_like 0.97
PF13476AAA_23 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 1.94
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 1.94
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 1.94
COG0493NADPH-dependent glutamate synthase beta chain or related oxidoreductaseAmino acid transport and metabolism [E] 1.94
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.94
COG0029Aspartate oxidaseCoenzyme transport and metabolism [H] 0.97
COG0446NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductaseLipid transport and metabolism [I] 0.97
COG0492Thioredoxin reductasePosttranslational modification, protein turnover, chaperones [O] 0.97
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.97
COG1053Succinate dehydrogenase/fumarate reductase, flavoprotein subunitEnergy production and conversion [C] 0.97
COG1249Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductaseEnergy production and conversion [C] 0.97
COG2072Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcDInorganic ion transport and metabolism [P] 0.97
COG2081Predicted flavoprotein YhiNGeneral function prediction only [R] 0.97
COG2509FAD-dependent dehydrogenaseGeneral function prediction only [R] 0.97
COG3634Alkyl hydroperoxide reductase subunit AhpFDefense mechanisms [V] 0.97

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms72.82 %
UnclassifiedrootN/A27.18 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459003|FZN2CUW02FYXPGAll Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
2170459006|GBPF9FW02G0WY7All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300004156|Ga0062589_101745664Not Available622Open in IMG/M
3300004463|Ga0063356_104093993All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium627Open in IMG/M
3300004479|Ga0062595_100651391Not Available834Open in IMG/M
3300005187|Ga0066675_10172469All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1501Open in IMG/M
3300005334|Ga0068869_100739973Not Available841Open in IMG/M
3300005335|Ga0070666_10674277Not Available757Open in IMG/M
3300005340|Ga0070689_100079635All Organisms → cellular organisms → Bacteria2570Open in IMG/M
3300005355|Ga0070671_101102576All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29697Open in IMG/M
3300005356|Ga0070674_100647171Not Available898Open in IMG/M
3300005438|Ga0070701_10943229Not Available598Open in IMG/M
3300005548|Ga0070665_101583014Not Available663Open in IMG/M
3300005617|Ga0068859_101279184Not Available808Open in IMG/M
3300005841|Ga0068863_100440245All Organisms → cellular organisms → Bacteria1278Open in IMG/M
3300005842|Ga0068858_100351291All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea1412Open in IMG/M
3300006047|Ga0075024_100138945All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1098Open in IMG/M
3300006050|Ga0075028_101049542All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300006576|Ga0074047_11673547All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium538Open in IMG/M
3300006576|Ga0074047_11675691Not Available540Open in IMG/M
3300006581|Ga0074048_11105937All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium775Open in IMG/M
3300006796|Ga0066665_11426753All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300006871|Ga0075434_100355119All Organisms → cellular organisms → Bacteria1487Open in IMG/M
3300007255|Ga0099791_10655817Not Available515Open in IMG/M
3300009012|Ga0066710_100255777All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2537Open in IMG/M
3300009088|Ga0099830_10902837All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium730Open in IMG/M
3300009088|Ga0099830_11273038All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium611Open in IMG/M
3300009090|Ga0099827_10031427All Organisms → cellular organisms → Bacteria3834Open in IMG/M
3300009090|Ga0099827_10592201All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300009137|Ga0066709_100078417All Organisms → cellular organisms → Bacteria3926Open in IMG/M
3300009137|Ga0066709_100214445All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2542Open in IMG/M
3300009176|Ga0105242_13269665All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300009610|Ga0105340_1352038All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29652Open in IMG/M
3300009804|Ga0105063_1079892Not Available521Open in IMG/M
3300009814|Ga0105082_1074291All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29608Open in IMG/M
3300010154|Ga0127503_10105042All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium666Open in IMG/M
3300010336|Ga0134071_10484636All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium637Open in IMG/M
3300010397|Ga0134124_12629604Not Available546Open in IMG/M
3300011269|Ga0137392_10614648All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium902Open in IMG/M
3300011270|Ga0137391_11519865All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29514Open in IMG/M
3300011271|Ga0137393_10212363All Organisms → cellular organisms → Bacteria1636Open in IMG/M
3300011422|Ga0137425_1098986All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29706Open in IMG/M
3300012166|Ga0137350_1049816All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29815Open in IMG/M
3300012189|Ga0137388_12010439All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300012207|Ga0137381_10917078All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium757Open in IMG/M
3300012208|Ga0137376_10660688Not Available903Open in IMG/M
3300012211|Ga0137377_11399204Not Available628Open in IMG/M
3300012225|Ga0137434_1056575All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29604Open in IMG/M
3300012285|Ga0137370_10507118Not Available739Open in IMG/M
3300012351|Ga0137386_10674582All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium743Open in IMG/M
3300012354|Ga0137366_10542100Not Available838Open in IMG/M
3300012355|Ga0137369_10858151All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium614Open in IMG/M
3300012363|Ga0137390_11119001All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29736Open in IMG/M
3300012917|Ga0137395_10728929All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29717Open in IMG/M
3300012918|Ga0137396_10060584All Organisms → cellular organisms → Bacteria → Acidobacteria2623Open in IMG/M
3300012925|Ga0137419_10383011All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291095Open in IMG/M
3300012927|Ga0137416_11181724All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium688Open in IMG/M
3300012944|Ga0137410_10317448All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291238Open in IMG/M
3300014871|Ga0180095_1023896All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29996Open in IMG/M
3300014969|Ga0157376_11240282All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium774Open in IMG/M
3300015241|Ga0137418_10007608All Organisms → cellular organisms → Bacteria9957Open in IMG/M
3300015245|Ga0137409_10448422All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1110Open in IMG/M
3300015371|Ga0132258_12911186All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1189Open in IMG/M
3300018000|Ga0184604_10083427All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29959Open in IMG/M
3300018028|Ga0184608_10220786Not Available832Open in IMG/M
3300018051|Ga0184620_10166570Not Available719Open in IMG/M
3300018052|Ga0184638_1328864All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300018063|Ga0184637_10631401All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29599Open in IMG/M
3300018072|Ga0184635_10323657Not Available598Open in IMG/M
3300018433|Ga0066667_10378798Not Available1136Open in IMG/M
3300018433|Ga0066667_10589573All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium926Open in IMG/M
3300018476|Ga0190274_13501980Not Available530Open in IMG/M
3300019259|Ga0184646_1265238All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1280Open in IMG/M
3300019279|Ga0184642_1325687All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29758Open in IMG/M
3300019878|Ga0193715_1064612All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29775Open in IMG/M
3300021078|Ga0210381_10184796All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.722Open in IMG/M
3300021510|Ga0222621_1114350Not Available573Open in IMG/M
3300022756|Ga0222622_10423185All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29941Open in IMG/M
3300025938|Ga0207704_10239588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales1354Open in IMG/M
3300025960|Ga0207651_10388337All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1185Open in IMG/M
3300027523|Ga0208890_1039036All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium733Open in IMG/M
3300027560|Ga0207981_1112765All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300027846|Ga0209180_10710436All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300027911|Ga0209698_11369019All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300028536|Ga0137415_11387981All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300028536|Ga0137415_11491063All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300028784|Ga0307282_10202847All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29948Open in IMG/M
3300028799|Ga0307284_10138456All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29933Open in IMG/M
3300028824|Ga0307310_10077877All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.1438Open in IMG/M
3300028824|Ga0307310_10169084All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291018Open in IMG/M
3300028884|Ga0307308_10419728All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29641Open in IMG/M
3300030620|Ga0302046_11067259All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29640Open in IMG/M
3300030990|Ga0308178_1075564All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29676Open in IMG/M
3300031099|Ga0308181_1050218Not Available790Open in IMG/M
3300031099|Ga0308181_1077901All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29681Open in IMG/M
3300031422|Ga0308186_1017050All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29677Open in IMG/M
3300031423|Ga0308177_1027116Not Available536Open in IMG/M
3300031424|Ga0308179_1051603Not Available536Open in IMG/M
3300034115|Ga0364945_0194261All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29618Open in IMG/M
3300034129|Ga0370493_0034741Not Available1540Open in IMG/M
3300034149|Ga0364929_0073588All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1057Open in IMG/M
3300034164|Ga0364940_0254844Not Available519Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil26.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.59%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil5.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.88%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.91%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.91%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment2.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.91%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.94%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.94%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.94%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.97%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.97%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.97%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.97%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.97%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.97%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459003Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2170459006Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cmEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006576Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009804Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40EnvironmentalOpen in IMG/M
3300009814Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011422Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2EnvironmentalOpen in IMG/M
3300012163Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT800_2EnvironmentalOpen in IMG/M
3300012166Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012225Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2EnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014871Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_1DaEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027523Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)EnvironmentalOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031099Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031422Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031423Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_148 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031424Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M
3300034129Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16EnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M
3300034164Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4A_015162102170459003Grass SoilMHRNRLVASFGLVAGLAAALSAQAPSPSGKADQKTIQSIRVKVIGCIVDGSEAGHYWLTNAVLSGDDIPSAAGTAGKAGSGKDVSFENSPSFDLIGSRVKGHVGH
L01_009023402170459006Grass SoilMHRNRLVASFGLVAGLAAALSAQAPSPRGKADQKTIQSIRVKVIGCIVDGSEAGHYRLTNAVLSGDDIPSAAGTAGKAGSGKDVSFENSPSFDLIGSRVKGHVGHQVEVVGIT
Ga0062589_10174566413300004156SoilMNRKSFAVCACLVAGSAAALSGQAPSQDVKVDQKAVNSIRVKVIGCVEGDAKTGHYALTGASVSGDDTPSSVGTTGKKGSGKDLSFENSLSYDLT
Ga0063356_10409399313300004463Arabidopsis Thaliana RhizosphereMNRNSLVVSFGLVAGLVAALSAQRSSSNGKTDPKTIQSIRVQVIGCVAGGSEAGHYRLTNAVLSGDDIPATAGT
Ga0062595_10065139123300004479SoilMNRKGLVASFGFVAGLTAITSAQAPAPPSNGQVDQKAVQSVRVKVIGCVAGDTETGRYVLTGASLTGDDTRPTVGTSGKMGSGKDLSFENSFSYDLIGGRLKAHSGHEVEI
Ga0066675_1017246943300005187SoilMNRNSLVASVGFVAGLAAALSAQVTSSNGNVDQKTIHSIRVKVIGCVAEGSDAGHYRLTSAFLSGDDIASTAGTAGKAGSGKDVSFENS
Ga0068869_10073997323300005334Miscanthus RhizosphereMNRKSFAVCVCLVAGSAAALSGQAPSSEGKVDQTAVNSIRVKVIGCVEGDAKTGHYALTGASVSGDDTPSAVGTTGKKGSGKDLSFENSLSY
Ga0070666_1067427713300005335Switchgrass RhizosphereMNRKSFAVCVCLVAGSAAALSGQAPSSEGKVDQTAVNSIRVKVIGCVEGDAKTGHYALTGASVSGDDTPSAVSTAGKKGSGKDLSFENSLSYDLIGGRLKSHLGHEVEIIGITSDA
Ga0070689_10007963513300005340Switchgrass RhizosphereMNRKGLVASFGFVAGLTAITSAQAPAPPSNGQVDQKAVQSVRVKVIGCVAGDTETGRYVLTGASLTGDDTRPTVGTSGKMGSGKDLSFENSFSYDLIGGRLKAHSGHEVEIIGITSDAKLNT
Ga0070671_10110257623300005355Switchgrass RhizosphereMNRKGLVACFGFVAGLAVGLSAQAPSSHSKEDQKAVQSIRVKVIGCVRGDAEAGRYSLTGAFLSGDDTPPTVETAGKIGSGKDLSFENSLSYDLI
Ga0070674_10064717123300005356Miscanthus RhizosphereMNRKGLVASFGFVAGLTAITSAQAPAPPSNGQVDQKAVQSVRVKVIGCVAGDTETGRYVLTGASLTGDDTRPTVGTSGKMGSGKDLSFENSFSYDLIGGRLKAHSAMKSKSSASPATRN*
Ga0070701_1094322923300005438Corn, Switchgrass And Miscanthus RhizosphereMNRKSFAVCVCLVAGSAAALSGQAPSSEGKVDQTAVNSIRVKVIGCVEGDAKTGHYALTGASVSGDDTPSAVGTAGKKGSGKDL
Ga0070665_10158301413300005548Switchgrass RhizosphereMNRKGLVASFGFVAGLTAITSAQAPAPPSNGQVDQKAVQSVRVKVIGCVAGDTETGRYVLTGASLTGDDTRPTVGTSGKMGSGKDLSFENSFSYDLI
Ga0068859_10127918413300005617Switchgrass RhizosphereMNRKSFAVCVCLVAGSAAALSGQAPSSEGKVDQTAVNSIRVKVIGCVEGDAKTGHYALTGASVSGDDTPSAV
Ga0068863_10044024513300005841Switchgrass RhizosphereMNRKGLVASFGFVAGLTAITSAQAPAPPSNGQVDQKAVQSVRVKVIGCVAGDTETGRYVLTGASLTGDDTRPTVG
Ga0068858_10035129123300005842Switchgrass RhizosphereMNRKSFAVCVCLVAGSAAALSGQAPSSEGKVDQTAVNSIRVKVIGCVEGDAKTGHYALTGASVSGDDTPSA
Ga0075024_10013894523300006047WatershedsMSRNSLVASFALVAALVAGLSAQGTSSNSDVNQKTIQSIRVKVIGCVAGGSEAGQYRLTDAVLSGDDIPSTVGTVGKVGSGQDVSFENSPSFDLIG
Ga0075028_10104954223300006050WatershedsMNPTGFVASFGLVAGLAAVLSARAPSSNGKVDQKAVQSIRVKVIGCVAGDAEAGRYILTGATLSGDDTPPTARTVGKIGSGKDLSFENSLSYDLIGGGLKAHVGHEVEIIGITSDAKLNN
Ga0074047_1167354723300006576SoilMHRNRLVASFGLVAGLAAALSAQAPSPRGKADQKTIQSIRVKVIGCIVDGGEAGHYRLTNAVPSGDDIPSTAGTAGKAG
Ga0074047_1167569113300006576SoilMNRKGLVASFGLVAGLTGITLAQASAPPSSNGQVDQKAVQSVRVKVIGCVAGDTATGHYVLTGAFLTGDDTRPTVGTSGKIGSGKDLSFE
Ga0074048_1110593713300006581SoilMHRNRLVASFGLVAGLAAALSAQAPSPRGKADQKTIQSIRVKVIGCIVDGGEAGHYRLTNAVPSGDDIPSTAGTAGKAGSGKDVSFENSPSFDLIGGRVKGYVGHQVE
Ga0066665_1142675313300006796SoilLNRHSLVAAFALVAGLGAALSAQATFSNATVNQKTIQSIRVTVIGCVADGADAGRYRVTNAVLSGDDIPSTAGTAGKAGSGKDVSFENSPSFDLI
Ga0075434_10035511933300006871Populus RhizosphereLNRHSLVAAFALVAGLGAALSAQATFSNGTVNQKTIQSIRVTVIGCVAGGPDVGRYRLTNAVLSGDDIPSTAGTAGKAGSGKDVS
Ga0099791_1065581713300007255Vadose Zone SoilMNRKGLVASFGLVAGLAAVLSAQAPSSNGKEDQKAVQSIRVKVIGCVAGDAEAGSYILTGAFLSGDDTPPTIGTAGKIGSGKDLSFENSPLYGLIGGRLKTHVGHEVEIIG
Ga0066710_10025577763300009012Grasslands SoilMNRNSLVASVGFVAGLAAALSAQATSSNGKVDPKTIHSIRVNVIGCVADGNEAGHYRLTNAFLSGDDMASTAGTAGKVGSGKDVSFENSPSFDLIGDRLNAHLGHKVDVIGITS
Ga0099830_1090283723300009088Vadose Zone SoilMTRNSLVVSFGLVASLAAALSAQATSTNGKVDQKAIHSIRVKVIGCVASGRDAAQYRLTNAFLSGDGVPSTAGTGGKASSGQDVSFENSPSFDLIGG
Ga0099830_1127303813300009088Vadose Zone SoilMNRQSLVAPFALVAGVVAALSAQGTSSNSDVNQKTIQSIRVKVIGCVAGGSEAGHYRLTDAVLSGDDIPSTAGTAGKAGSGQDV
Ga0099827_1003142763300009090Vadose Zone SoilMTRNSLVASFGLVASLAAALSAQATYTNGKMDQKALQSIKVIGCVASGREAGQYRLTHAFLSGDGVPSTAGT
Ga0099827_1059220133300009090Vadose Zone SoilMTRNSLVASFGLVASLAAALSAQATYTNGKMDQKAIQSIRVKVIGCVASGREAGQYRLTHAFLSGDGVPSTAGTGGTAG
Ga0066709_10007841733300009137Grasslands SoilMNRKSLVASFGLVACLAAGLSAQAPSSSGKVDQKAVQSIRVKVIGCVAGDAKTGRYILTGAFLSGDDVRQPSGRRGR*
Ga0066709_10021444513300009137Grasslands SoilMNRNSLVASVGFVAGLAAALSAQATSSNGKVDPKTIHSIRVNVIGCVADGNEAGHYRLTNAFLSGDDMASTAGTAGKVGSGKDVSFENRPSFDLIGDRLNAHLGHKVD
Ga0105242_1326966513300009176Miscanthus RhizosphereMYRTNLIACLGLGAGLTAAVSAQAPSPIGTAGQKTIHSIRVNVIGCVAAGSDAGQYRLTNAVLSGDDVQSAKGTTAKVGSGKDVSFE
Ga0105340_135203813300009610SoilMNRKSLVVSFGLVACLAAALSAQAPSSNDKVDQKAVQSIRVKVIGCVAGDAEAGRYILTG
Ga0105063_107989213300009804Groundwater SandMNRKSLVVSLGLAAGLAAVLSAQGPSSNGTTDPKTIQSIRVKVIGCVAGGSEAGHYRLTNAFLSGDARVD*
Ga0105082_107429113300009814Groundwater SandMNRKSLVASFSLVAGLAAALSAQAPSSNGKVDQQAVQSIRVKVIGCVEGDAEAGRYILTGAFLSGGDTPSTVGTAG
Ga0127503_1010504213300010154SoilMHRNRLVASFGLVAGLAAALSAQAPSPRGKADQKTIQSIRVKVIGCIVDGGEAGHYRLTNAVPSGDDIPSTAGTAGKAGSGKDVSFENSPSFDL
Ga0134071_1048463623300010336Grasslands SoilMTRNSLVASFGLVASLAAALSAQATYTNGKMDQKAIQSIRVKVIGCVASGREAGQYRLTHAFLSGDGVPSTAGTGGTAGSGQDVSFENSPSYDLIGGHLKAHVGHKVEVIGITSDTKLK
Ga0134124_1262960413300010397Terrestrial SoilMNRKGLVASFGLVAGLTGITPAQASAPSNSQVDQKAVQSVRVKVIGCVAGDTETGRYVLTGASLTGDDTRPTVGTSGKMGSGKDLSFENSFS
Ga0137392_1061464823300011269Vadose Zone SoilMNRQSLVAPFALVAGVVAALSAQGTSSNSDVNQKTIQSIRVKVIGCVAGGSEAGHYRLTDAVLSGDDIPSTAGTAGKAGSGQDLSFENSPSFDLIGDHL
Ga0137391_1151986513300011270Vadose Zone SoilMYRKSLAAASFSLVAGVTAVLSGRAPSSNGSVDEKAAQIIRVKVIGCVADDATAGRYALTGAFLSGDDIPRGIG
Ga0137393_1021236313300011271Vadose Zone SoilMNRKSLVASFGLIAALAMILSAQAPSSNGTVDQKAVQSIRVKVIGCVADDATAGRYALTGAFLSGDDIPRGIGIAETRGSGMDLSFENRLS
Ga0137425_109898623300011422SoilMNRKSLVASFGLVAGLAAALSAQAPSSNDKVDQKRVQSIRVKVIGCVEGDAKAGRYILTGAFLSGGNDTPSTVGTAGKIGSGKDLSFENSLSY
Ga0137355_110080013300012163SoilMNRKSLVATFGLVACLAAALSAQAPSSNGKVDQKAVQSIRVKVIGCVAGDAEA
Ga0137350_104981613300012166SoilMNRKSLVATFGLVACLAAALSAQAPSSNGKVDQKAVQSIRVKVIGCVAGDAEAGRYILTGAFGSGDDIPSIVGTAGKVGSGKDL
Ga0137388_1201043913300012189Vadose Zone SoilMNRQSLVAPFALVAGVVAALSAQGTSSNSDVNQKTIQSIRVKVIGCVAGGSEAGHYRLTDAVLSGDDIPSTAGTAGKAG
Ga0137381_1091707813300012207Vadose Zone SoilLTAAVSAQAPPPNGKGDQRAVQSIRVTVFGCVEGHAEAGRSVLTRAFLSGDDTPSTVGTPGKRGSGKDLSFENSRSYDLIGGRLTAHTGHVVEITGITSDGD*
Ga0137376_1066068823300012208Vadose Zone SoilMNRKSLVASFGLVACLAAGLSAQAPSSSGKVDQKAVQSIRVKVIGCVAGDAKTGRYILTGAFLSGDDVRQPS
Ga0137377_1139920423300012211Vadose Zone SoilMNRKSLVASFGLVTCLAAALSAQAPSSNGKVDQKAVQSIRVKVIGCVAGDAEAGRYILTGAFLSGDDVPSTVGTSGKIGSGKDLSFENSLSYDLIGGRVKAHVGH
Ga0137434_105657513300012225SoilMNRKSLVASFGLVACLAAALSAQAPSSNGKVDQKAVQSIRVKVIGCVAGDAEAGRYILTGAFLSGDDVPSTVGTAGKIGSGRDLS
Ga0137370_1050711813300012285Vadose Zone SoilMNRKSLVASFGLVACLAAGLSAQAPSSSGKVDQKAVQSIRVKVIGCVAGDAKAGRYILTGAFLSGDDVPSTVGTAGKKGSGKDLSFENSLSY
Ga0137386_1067458213300012351Vadose Zone SoilMNRKSLVASFGLVACLAAGLSAQAPSSSGKVDQKAVQSIRVKVIGCVAGDAKTGRYILTGAFLSGDDVPSTVGTSGKIGSGKDLSFENSLSYDLIGGRLKAHVGHEVEII
Ga0137366_1054210013300012354Vadose Zone SoilMNRKSLVASFGLVACLAAGLSAQAPSSSGKVDQKAVQSIRVKVIGCVAGDAKTGRYILTGSFLSGDDVRQPSGRRGR*
Ga0137369_1085815113300012355Vadose Zone SoilMNRHSLVASFGLVAGMAAALSAQTMSSNVNVNQKTIQSIRVKVIGCVVRSTEASRYRLTNAVLSGDDIPSTAGTAGKRGSGKDVSFENRSSFDL
Ga0137390_1111900123300012363Vadose Zone SoilMNRQGLVASCGLVAAVLSAQAPSSNRNVDHKAVQSIRVKVIGCVADNAEAGRYILTGAFLSGND
Ga0137395_1072892923300012917Vadose Zone SoilMNRKSLVASFGLVACLAAASSAQAQSSNGNVDQKAVQSIRVKVIGCVEGDAEAG
Ga0137396_1006058413300012918Vadose Zone SoilMNRKSLVASFGLVAGLAAVLSAQAPSSNGKEDQKAVQSIRVKVIGCVAGDAEAGRYILTGAFLSGDDTPSTVGTAGKRGSGKALSFENSLSYDLIGGRL
Ga0137419_1038301113300012925Vadose Zone SoilMNRKCLVASLGLVAGLAAALSAQSPSSNGKVGQRVVDSIRVKVIGCVTGDAEAARYILTGAFLSGDDTPPTIGTAGKIGSGKDLSFENNPSYGLI
Ga0137416_1118172423300012927Vadose Zone SoilMNRKCLVASLGLVAGLAAALSAQSPSSNGKVGQRVVDSIRVKVIGCVTGDAEAARYILTGAFLSGDDTPPTIGTAGKIGSGKDLSFENSPSYGLIGGRLKTHVGHEVEI
Ga0137410_1031744813300012944Vadose Zone SoilMNRKGLVASFGLVAGLAAVLSAQAPSSNGKEDQKAVQSIRVKVIGCVAGDAEAGSYILTGAFLS
Ga0180095_102389613300014871SoilMNRKSLVATFGLVACLAAALSAQAPSSNGKVDQKAVQSIRVKVIGCVAGDAEAGRYILTGAFGSGDDIPSIVGTAGKVGSGKDLSFENSLSYDSWAPVSRHT*
Ga0157376_1124028223300014969Miscanthus RhizosphereMNRKGLVVSFGLVAGLTVVLSAQAPSSNSKEDQKAVQSVRVKVIGCVRGDAEAGRYILTGAFLSGDDTPPTVWTAGKIGSGKDLSFENSRSYDLIGGHLKAHEGHEVEIIGITRDAKLTNRQ
Ga0137418_1000760883300015241Vadose Zone SoilMNRKCLVASLGLVAGLAAALSAQSPSSNSKVGQRVVDSIRVKVIGCVTGDAEAARYILTGAFLSGDDTPPTIGTAGKIGSGKDLSFENNPSYGLI
Ga0137409_1044842213300015245Vadose Zone SoilMTRNSLVASFGLVASLAAALSAQATYTNGKMDQKAIQSIRVKVIGCVASGREAGQYRLTHAFVSGDGVPSTAGTGGTA
Ga0132258_1291118623300015371Arabidopsis RhizosphereMNRKSFAVCVCLVAGSAAAMSGQAPSSDGKVDQTAVNSIRVKVIGCVEGDAKTGHYALTGASVSGDDTPSAVGTTGKKGSGKDLSFENSLSYDLIGGRLKSHLGHEVEIIGITSDARLN
Ga0184604_1008342713300018000Groundwater SedimentMNQKCLVASLAFVACWAVVSAQAPSSNAKLDQKAVQSIRVRVIGCVTSDVAAARYVLTDAVLSGDDSPAPAPVGTSGKKSSGKDLSFENSLSYELIGGGLTPHLGYEVEIIGITSDAKLN
Ga0184608_1022078613300018028Groundwater SedimentMNRTSAVASFGLVAGLAAALSAQAPSSNGKVDQKAVESIRAKVIGCVAGDAEAGRYILTGAFLSGDAVPSTVGTAGKIGSGKDLSFENS
Ga0184620_1016657013300018051Groundwater SedimentMNRKSVVASSGLVACLAAALSAQAPSSNGKVDQKAVESIRAKVIGCVAGDAEAGRYVLT
Ga0184638_132886423300018052Groundwater SedimentMNRKSRVVSLGLAAGLAAVLSAQGPSSNGTTDPKTIQSIRVKVIGCVAGGTEAGRYLLTNAFLSGDDIPSTAGTVGKVGSGKDVSFENSPSY
Ga0184637_1063140123300018063Groundwater SedimentMNRTSLVASFGLVACLAAALSAQAPSSNDKVDQKAVQSIRVKVIGCVAGDAEAGRYILTGAFLSGDDTPSTVGTAGKIGSGT
Ga0184635_1032365713300018072Groundwater SedimentMNRKGLVASFGLVAGLTGITPAQASAPPSNGQVDPKAVQSVRVKVIGCVAGDTATGRYVLTG
Ga0066667_1037879813300018433Grasslands SoilMNRKSLVASFGLVACLAAGLSAQAPSSSGKVDQKAVQSIRVKVIGCVAGDAKTGRYILTGAFLSGDDVRQPSGRRGR
Ga0066667_1058957313300018433Grasslands SoilMNRNSLVASVGFVAGLAAALSAQVTSSNGNVDQKTIHSIRVKVIGCVAEGSDAGHYRLTSAFLSGDDIASTAGTAGKAGSGKDVSFENSPSFDLIGGRLKAHLGHKV
Ga0190274_1350198013300018476SoilMNRKSLVASFGLVACLTAALSAQAPSSNGKVDQKAVQSIRVKVIGCVAGDAEAGRYILTGAFGSGDDIPSIVGTAGKIGSGKDLSFENSLLYDLIGGRLKAHVGHEVEI
Ga0184646_126523813300019259Groundwater SedimentMNRKSLVASFGFVGGLAVLSAQAPSSNGKVDQKAVQSIRVKVIGCVAGDAEAGHYILTGAFLSGDDVPSTIGQRGT
Ga0184642_132568723300019279Groundwater SedimentMNRKSLVASFGLIACLAAALSAQAPSSNGKVDQKVVQSIRAKVTGCVGGDAEAGRYFLTAAFLSGDDVPSTVGTTGKIGSGKDLSFENSRS
Ga0193715_106461213300019878SoilMNRKSVVASFGLVACLAAALSAQAPPSNGKVDQKVVQSIRAKVIGCVAGDAEAGRYILTGAFLSGDDVPSTVGTAGKRG
Ga0210381_1018479623300021078Groundwater SedimentMNRMCLVASLSLVAGLVAVLSVQSSNGKEDPKAVQSVRVKVIGCVSADGDAGRYILADAFLSGDDTPPTIGTAGKIGSGKDLSFENSLSYGLVGGGLKAHV
Ga0222621_111435013300021510Groundwater SedimentMNQKCLVASLAFVACWAVVSAQAPSSNAKLDQKAVQSIRVRVIGCVTSDVAAARYVLTDAVLSGDDSPAPAPVGTSGKKSSGKDLSFENSLSYELIGGGLTPHLGYEVEIIGITSDA
Ga0222622_1042318513300022756Groundwater SedimentMNQKCLVASLAFVACWAVVSAQAPSSNAKLDQKAVQSIRVRVIGCVTSDVAAARYVLTDAVLSGDDSPAPAPVGTSGKKSSGKDLSFENSLSYELIGGGLTPHLGYEVEIIGITSDAKLNHADALTSAVDSSKHQKT
Ga0207704_1023958823300025938Miscanthus RhizosphereMNRKGLVASFGFVAGLTALTSAQAPAPPSNGQVDQKAVQSVRVKVIGCVAGDTETGRYVLTGASLTGDDTRPTVGTSGKMGSGKDLSFENSFSYDLIGGRLKAHSAMKSKSSASPATRN
Ga0207651_1038833723300025960Switchgrass RhizosphereMNRKGLVACVGLVTGLAVGLSAQAPSSNSKEDPKAVQSIRVKVIGCVRGDAEAGRYILTGAFLSGDDTPPTVWTSGKIGSGRDLSFENSLSYDLIGDRLKAH
Ga0208890_103903613300027523SoilMHRNRLVASFGLVAGLAAALSAQAPSPRGKADQKTIQSIRVKVIGCIVDGGEAGHYRLTNAVPSGDDIPSTAGTAGKAGSGKDVSFENSPSFDLIGGRVKGYVGHQVEV
Ga0207981_111276513300027560SoilMHRNRLVASFGLVAGLAAALSAQAPSPRGKADQKTIQSIRVKVIGCIVDGGEAGHYRLTNAVPSGDDIPSTAGTAGKAGSGKDVS
Ga0209180_1071043623300027846Vadose Zone SoilMTRNSLVASFGLVASLAAALSAQATYTNGKMDQKAIQSIRVKVIGCVASGREAGQYRLTHAFLSGDGVPSTAGTGGTAGSGQ
Ga0209698_1136901913300027911WatershedsMHLKRLVASFGLVAGVTAALSAQAPSSNGKVDQDAIQSIRVTVIGCVARGTAVGRYRLTHAVLRGDDIPSTTGTVGKAGSGKDVSFEDSPS
Ga0137415_1138798113300028536Vadose Zone SoilMNRQSLVASFALIAALVAALSAQGTSSNRDVNRKTIQSIRVKVIGCVAGGSEAGQYRLTDAVLSGDDIPSTAGTAGKAGSGQD
Ga0137415_1149106313300028536Vadose Zone SoilMNRYSLVASVGLVAGLAAALSAQVTSSNDEENQKTIHSIRVKVVGCVVGGTDAGRYRLTNAVLSGDDTPATAGTAGKAGSGKDVS
Ga0307282_1020284723300028784SoilMNRKSVVASFGLVACLAAALSAQAPPSNGKVDKKVVQSIRAKVIGCVAGDAEAGRYILTGAFLSGDDVPSTVGTAGKRGSGKDLSFENSLSYDLIGGRLKA
Ga0307284_1013845613300028799SoilMNRKSVVASFGLVACFAAALSAQAPSSNGKVDQKAVQSIRAKVIGCVGGDAESGRYILTAAFLSGDDVP
Ga0307310_1007787713300028824SoilMNRMWLVAAFSLVAGLVAVLSAQSSNGKEDQKAVQSVRVKVIGCVSADGDAGRYILADAFLSGDDTPPTIGTAGKI
Ga0307310_1016908433300028824SoilMNRKSVVASFGLVACFAAALSAQAPSSNGKVDQKAVQSIRAKVIGCVGGDAESGRYILTAAFLSGDDVPSTVGTVGK
Ga0307308_1041972813300028884SoilMNRKSVVASFGLVACLAAALSAQAPPSNGKVDQKVVQSIRAKVIGCVAGDAEAGRYILTGAFLSG
Ga0302046_1106725923300030620SoilMNRKSLAASFGLVAGLAAALSAQAPSSNGKVDQKAVQSMRVKVNGCVAGDAKAGRYILTGTFLSGDDTPSAV
Ga0308178_107556423300030990SoilMNRQSLVAFFGLVACLAAAVSAQAPAASGTVDQKATQSSRVKVRGCVATGTEAGRYVLADAYLSGDDVRSTVGTAGKIGSGK
Ga0308181_105021813300031099SoilMNQKCLVASLAFVACWAVVSAQAPSSNAKLDQKAVQSIRVRVIGCVTSDVAAARYVLTDAVLSGDDSPAPAPVGTSGKKSSGKDLSFENSLSYELIGGGLTPHLGYEVEIIGITSDAKLNHADALTSAVDSSKHQQTTLTVESVRMVGAKCR
Ga0308181_107790113300031099SoilMNRKSVVASFGLVACFAAALSAQAPSSNGKVDQKAVQSIRAKVIGCVGGDAESGRYILTAAFLSGDDVPSTV
Ga0308186_101705013300031422SoilMNRKGVASLGLVAGLAAVLSAQAPSLNGTEDQKTVQSIRVKVIGCVADAAEAGGYILTGAFLSGDDAPPTIGTAGTIGS
Ga0308177_102711613300031423SoilMHRKNLIACVGLGVGLTAVVSAQAPSPRGTAGQKTIYSIRVHVIGCVVAGGAADQYRLTNAVLSGDD
Ga0308179_105160313300031424SoilMNRKSLVASFGLVACLAAALSAQAPSSNGKVDQKAVQSIRVKVIGCVAGDNEAGHDNLTGAFLSGDDVLSTVGTAGKIGTGKDLSFENSL
Ga0364945_0194261_2_2863300034115SedimentMNRKSLVVSFGLVACLAAALSAQAPSSNDKVDQKAVQSIRVKVIGCVAGDAEAGRYILTGAFVSGDDVPSTVGTAGKIGSGKDLSFENSLSYDLI
Ga0370493_0034741_1_3693300034129Untreated Peat SoilMITSPRSTPRAALLHCKGFVASFGFVVGLVAVLSAQAPSSNTKVDQKVVQSIRVKVSGCVASGARAGCYILTGAFLSGNGSPATVGTSGKIGSGKDLSFENSLSYDLVSDRLKAHVGHEVEIV
Ga0364929_0073588_573_8903300034149SedimentVSLGLAAGLAAVLSAQGPSSNGTTDPKTIQSIRVKVIGCVAGGSEAGHYRLTNAFLSGDDVASTAVGTAGSGQDVSFENSPTFDLIGGDLNAHLGHKVEVIGIHQ
Ga0364940_0254844_1_3363300034164SedimentMNRKSLVACFGLVAGLAAALSAQAPSSNGKVDQKAVQSIRVKVIGCVAGDAEAGRYILTGAFLSGDDTPSTVGTAGKIGSGTDLSFENSHSYDLMGGRLKAYVGHEVEIIGI

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Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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