Metagenome / Metatranscriptome Family F099398

Basic Information
Family ID	F099398
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	44 residues
Representative Sequence	MMQKILNSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMALRS
Number of Associated Samples	98
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.05 %
% of genes near scaffold ends (potentially truncated)	98.06 %
% of genes from short scaffolds (< 2000 bps)	95.15 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (95.146 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.563 % of family members)
Environment Ontology (ENVO)	Unclassified (20.388 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.718 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.44% β-sheet: 0.00% Coil/Unstructured: 55.56%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF04335	VirB8	1.94
PF00436	SSB	0.97
PF04610	TrbL	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG3736	Type IV secretory pathway, component VirB8	Intracellular trafficking, secretion, and vesicular transport [U]	1.94
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.97
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.97
COG3704	Type IV secretory pathway, VirB6 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.97
COG3846	Type IV secretory pathway, TrbL components	Intracellular trafficking, secretion, and vesicular transport [U]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.15 %
Unclassified	root	N/A	4.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.15 %
Unclassified	root	N/A	4.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.15 %
Unclassified	root	N/A	4.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	94.17 %
Unclassified	root	N/A	4.85 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	93.20 %
Unclassified	root	N/A	4.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	93.20 %
Unclassified	root	N/A	4.85 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	93.20 %
Unclassified	root	N/A	4.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	93.20 %
Unclassified	root	N/A	4.85 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	93.20 %
Unclassified	root	N/A	4.85 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000571\|JGI1358J11329_10164289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300000955\|JGI1027J12803_108004074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300001593\|JGI12635J15846_10137716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1695	Open in IMG/M
3300004080\|Ga0062385_11165608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300005175\|Ga0066673_10768544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300005541\|Ga0070733_10153515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1495	Open in IMG/M
3300005921\|Ga0070766_10408232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	890	Open in IMG/M
3300006041\|Ga0075023_100053557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1272	Open in IMG/M
3300006059\|Ga0075017_101287171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300006086\|Ga0075019_10307312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300006354\|Ga0075021_10095957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1758	Open in IMG/M
3300006796\|Ga0066665_10616045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300006806\|Ga0079220_10240793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300006893\|Ga0073928_10326183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1145	Open in IMG/M
3300006954\|Ga0079219_10546956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300009038\|Ga0099829_11547599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300009089\|Ga0099828_11281456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300009098\|Ga0105245_12931925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300009143\|Ga0099792_11158438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300009615\|Ga0116103_1016133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2447	Open in IMG/M
3300009624\|Ga0116105_1146861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300009639\|Ga0116122_1188669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300009764\|Ga0116134_1320123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300010303\|Ga0134082_10376636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300010335\|Ga0134063_10354951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300010341\|Ga0074045_11013700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300010358\|Ga0126370_10472450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300010361\|Ga0126378_10875639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300010396\|Ga0134126_10063892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4581	Open in IMG/M
3300010398\|Ga0126383_13321806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300011269\|Ga0137392_10876109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300011271\|Ga0137393_11039476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300012210\|Ga0137378_10378220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1315	Open in IMG/M
3300012285\|Ga0137370_10790047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300012922\|Ga0137394_11632126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300012923\|Ga0137359_10066330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3152	Open in IMG/M
3300012923\|Ga0137359_11242088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300012927\|Ga0137416_10311508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1308	Open in IMG/M
3300012927\|Ga0137416_11502179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300012929\|Ga0137404_10984820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300012957\|Ga0164303_10368003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300014161\|Ga0181529_10594657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300014162\|Ga0181538_10519351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300014489\|Ga0182018_10659925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300014501\|Ga0182024_10443376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1667	Open in IMG/M
3300014501\|Ga0182024_11994720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300014657\|Ga0181522_10656081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300015054\|Ga0137420_1183904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1932	Open in IMG/M
3300016357\|Ga0182032_11823875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300016387\|Ga0182040_11965893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300017938\|Ga0187854_10481721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300017995\|Ga0187816_10387207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300018013\|Ga0187873_1385545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300018014\|Ga0187860_1397378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300018025\|Ga0187885_10326024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300018034\|Ga0187863_10794296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300018035\|Ga0187875_10228996	Not Available	1019	Open in IMG/M
3300018038\|Ga0187855_10416547	Not Available	783	Open in IMG/M
3300018060\|Ga0187765_10511188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300019789\|Ga0137408_1416941	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300019888\|Ga0193751_1170933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300020579\|Ga0210407_10626976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300020580\|Ga0210403_11349157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300020581\|Ga0210399_11011983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300021402\|Ga0210385_10801806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300021406\|Ga0210386_10822466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300021432\|Ga0210384_11849976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300021474\|Ga0210390_10103635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2376	Open in IMG/M
3300021560\|Ga0126371_11747146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300022528\|Ga0242669_1123042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300022557\|Ga0212123_10283125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300022731\|Ga0224563_1019633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300022873\|Ga0224550_1055792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300025441\|Ga0208456_1057301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300025442\|Ga0208034_1069636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300026551\|Ga0209648_10161080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1759	Open in IMG/M
3300027034\|Ga0209730_1021544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300027326\|Ga0209731_1030985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300027684\|Ga0209626_1095260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300027765\|Ga0209073_10414176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300027767\|Ga0209655_10286968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300027894\|Ga0209068_10007818	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	5045	Open in IMG/M
3300028047\|Ga0209526_10854614	Not Available	558	Open in IMG/M
3300028792\|Ga0307504_10286232	Not Available	615	Open in IMG/M
3300029944\|Ga0311352_11480212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300030007\|Ga0311338_12073253	Not Available	503	Open in IMG/M
3300030054\|Ga0302182_10466660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300030057\|Ga0302176_10199740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300030399\|Ga0311353_11540689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300031040\|Ga0265754_1006355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300031090\|Ga0265760_10275859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300031231\|Ga0170824_106240746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300031236\|Ga0302324_101657349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300031671\|Ga0307372_10420141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300031671\|Ga0307372_10458843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300031672\|Ga0307373_10310941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300031754\|Ga0307475_11474327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300032059\|Ga0318533_11400106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300032180\|Ga0307471_103543686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300032770\|Ga0335085_11865408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300033402\|Ga0326728_10846832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300033402\|Ga0326728_11029032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300034091\|Ga0326724_0458167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.03%
Host-Associated	Host-Associated	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.82%
Aquatic	Environmental → Aquatic	26.21%
Plants	Host-Associated → Plants	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.11%
Freshwater	Environmental → Aquatic → Freshwater	19.42%
Peat	Environmental → Terrestrial → Peat	9.71%
Sediment	Environmental → Aquatic → Sediment	4.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.71%
Loam	Environmental → Terrestrial → Soil → Loam	6.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.85%
Clay	Environmental → Terrestrial → Soil → Clay	2.91%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.91%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.91%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.97%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.91%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.91%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.94%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.97%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.97%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.97%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000571	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300025441	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100 (SPAdes)	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099398

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1358J11329_101642891	3300000571	Groundwater	MIQRILSSKNFVACLLAAATGMALYFKLPFPAENVFLQLMAL
JGI1027J12803_1080040742	3300000955	Soil	MIQRILSSKNLVAFVLAAATGMTLYFRVPFPEGNIFL
JGI12635J15846_101377161	3300001593	Forest Soil	MQKILSSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMALRSPSIFFFVKYS
Ga0062385_111656083	3300004080	Bog Forest Soil	MIQRILNSKNFVACLLAAATVLVLYIRMPFPEGNLFLELLFLRAQ
Ga0066673_107685442	3300005175	Soil	MMQRIINSKNLVAFVLAAATGMTLYFRVPFPETNTFLLVMA
Ga0070733_101535153	3300005541	Surface Soil	MMQKILNSKNFVACLLAAATGMILYFRVPFPDENIFLRVMALRSPSIFYFVK
Ga0070766_104082321	3300005921	Soil	MMQKILSSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMAQRSPSIF
Ga0075023_1000535573	3300006041	Watersheds	MQRILNSKNLVAFVLAAATGMTLYFRMPFPEGNIFL
Ga0075017_1012871711	3300006059	Watersheds	MIQKILNSKNFVACLLAAATGMALYFRVPFPDENIFLQVMALRSPSIFYFVKYSY
Ga0075019_103073121	3300006086	Watersheds	MQRILNSKNLVAFVLAAATGMTLYFRMPFPEGNIFLRVMALRSPSAFE
Ga0075021_100959571	3300006354	Watersheds	MIQRILNSKNLVAFVLAAATGMTLYFRVPFPEANIFLRVMALRSPSAF
Ga0066665_106160451	3300006796	Soil	MMQRIINSKNLVAFVLAAATGMTLHFRVPFPETNTFLL
Ga0079220_102407933	3300006806	Agricultural Soil	MMQRILNSKNLVAFVLAAATGMTLYFRVPFPEGNIFLRVMALRS
Ga0073928_103261831	3300006893	Iron-Sulfur Acid Spring	MMQKILSSKNFVACLLAAATGMTFYFRVPFPDENIFLQVMALRSPS
Ga0079219_105469561	3300006954	Agricultural Soil	MMQRILNSKNLVAFVLAAATGMTLYFRVPFPEGNIFLRVMALRSPSA
Ga0099829_115475991	3300009038	Vadose Zone Soil	MMQRVLNSKNFVAFVLAAATGMTLYFGVPFPEGNIFLRVMALRS
Ga0099828_112814562	3300009089	Vadose Zone Soil	MMQRILNSKNLVAFVLAAATGMTLYFRMPFPEGNIFLRVM
Ga0105245_129319251	3300009098	Miscanthus Rhizosphere	MIQKILNSKNFVACLLAAATGMTLYFRVPFPEENVFL
Ga0099792_111584381	3300009143	Vadose Zone Soil	MMQKILNSKNFVACLLAAASGMTLYFRVPFPEENVFLQVM
Ga0116103_10161331	3300009615	Peatland	MIQRILNSKNLVAFVLAAATGMALYFRMPFREDNIFLQVMALRSPSV
Ga0116105_11468611	3300009624	Peatland	MMQKILNSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMAQR
Ga0116122_11886691	3300009639	Peatland	MMQKILSSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMALRSPSIF
Ga0116134_13201232	3300009764	Peatland	MMQKILNSKNFVACLLAAATGMNLYFRVPFPDENIFLRVMAQR
Ga0134082_103766362	3300010303	Grasslands Soil	MIQRVLNSENFIAFLLASATGMTLYFLLPFPEGNLFLRERQQEVE
Ga0134063_103549511	3300010335	Grasslands Soil	MMQRIINSKNLVAFVLAAATGMTLYFRVPFPETNTFLLVM
Ga0074045_110137001	3300010341	Bog Forest Soil	MIQRILNSKNLVAFLLAAATGMTLYFRMPFREDNIFLQVM
Ga0126370_104724501	3300010358	Tropical Forest Soil	MMQRILNSKNLVAFVLAAATGMTLYFRIPFPESNI
Ga0126378_108756393	3300010361	Tropical Forest Soil	MMQRILNSKNFVAFILAAATGMTLYFRVPLPERNIFLRVMALRSPSAFEAL
Ga0134126_100638928	3300010396	Terrestrial Soil	MMQKILNSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMAL
Ga0126383_133218062	3300010398	Tropical Forest Soil	MMQRILNSKNLVAFVLAAATGMTLYFRAPFPEGNIFLRVMALRSPSAFEVLKYS
Ga0137392_108761091	3300011269	Vadose Zone Soil	MIQRILNSKNLVAFVLAAATGMTLYFRVPFPEGNIFLRVMALQSPSAFEV
Ga0137393_110394762	3300011271	Vadose Zone Soil	MIQRILNSRNFVASLLAAATGMALYLRLPFPTGNVFLQAR
Ga0137378_103782201	3300012210	Vadose Zone Soil	MMQRILNSKNLVAFVLAAATGLTLYFRVPFPEGNIFLR
Ga0137370_107900473	3300012285	Vadose Zone Soil	MIQRILNSKNFVAYLLAAATGMALYFRIPFPDENIFLLVMVLRSPSI
Ga0137394_116321262	3300012922	Vadose Zone Soil	MIQRILNSKNLVAFVLAAATGMTLYFRAPFPEANIFLGVMALRSPSAFQVLKYS
Ga0137359_100663307	3300012923	Vadose Zone Soil	MIQKILNSKNFVACLLAAATGMALYFRVPFPDENIFLQVMALRSPSI
Ga0137359_112420882	3300012923	Vadose Zone Soil	MIQRILSSKNFVACLLAAATGLALFFKLPFPAENVFLQ
Ga0137416_103115081	3300012927	Vadose Zone Soil	MIQKILNSKNFVACLLAAATGMTLYFRVPFPDENIFLRVMALRSPSIFYFVKY
Ga0137416_115021791	3300012927	Vadose Zone Soil	MIQRIINSKNLVAFVLAAATGMTLYFRVPFPETNTFLLVMALRSPSA
Ga0137404_109848203	3300012929	Vadose Zone Soil	MIQRILNSKNLVAFVLATATGMTLYFRVPFPDGNIFLRVMALRSPSAFEVLK
Ga0164303_103680031	3300012957	Soil	MMQRILNSKNLVALVLAAATGMTLYFRIPFPEGNLF
Ga0181529_105946572	3300014161	Bog	MMQKILNSKNFVACLLAAATGMTLYFRVPFPDENIFLQVMAQRSPSIFYFVKYSY
Ga0181538_105193511	3300014162	Bog	MIQRILNSKNLVAFVLAAATGMTLYFRIPFREDNIFLQVMALRS
Ga0182018_106599251	3300014489	Palsa	MIQKILNSKNFVACLLAAATGMTLYFRVPFPDENIFLQVMAQRSPSIFCF
Ga0182024_104433761	3300014501	Permafrost	MIQRILSSKNFVACLLAAATGMTLYFRVPFPDENIFLQVMAVRSPS
Ga0182024_119947201	3300014501	Permafrost	MIQRILSSKNFVACLLAAATGMTLYFRVPFPDENIFLQVMAVRSPSI
Ga0181522_106560811	3300014657	Bog	MMQKLLNSKNFVACLLAAATGMTLYFWVPFPDDNI
Ga0137420_11839044	3300015054	Vadose Zone Soil	MIQRILRSKNFVACLLAAVMGMALYFKLPFPAENAFL
Ga0182032_118238752	3300016357	Soil	MIQRILASKDFVASLLAAGTGMTLYFRVPFPENNVFLQVIALRSPWAFGVLKYS
Ga0182040_119658932	3300016387	Soil	MIQRILASKDFVASLLAAGTGMTLYFRVPFPEGNVFLQVIALRSPSAFGVL
Ga0187854_104817212	3300017938	Peatland	MMQKILNSKNFVACLLAAATGMILYFRVPFPEENIFLQVMALRSPSIFYFV
Ga0187816_103872072	3300017995	Freshwater Sediment	MMQRILNSKNLVAFVLAAATGMTLYFWVPFPEANIFVRVMALRSPSVFEVLKY
Ga0187873_13855452	3300018013	Peatland	MIQRILNSKNFIAFVLASATGMTLYFLLPFPEGNLFL
Ga0187860_13973782	3300018014	Peatland	MMQKILNSKNFVACLLAAATGMTLYFRVRFPEDNVFLQVMAQRSPSIFYF
Ga0187885_103260242	3300018025	Peatland	MIQRILNSKNLVAFVLAAATGMALYFRMPFREDNIFLQVMALRS
Ga0187863_107942961	3300018034	Peatland	MMQKILNSKNFVACLLAAATGMTLYFRVPFPEENVFLQV
Ga0187875_102289961	3300018035	Peatland	MIQRIINSKNFIAFLLASATGMTLYFLYPFPASNLFLRVIA
Ga0187855_104165471	3300018038	Peatland	MIQRIINSKNFIAFLLASATGMTLYFLYPFPASNLFLRVI
Ga0187765_105111881	3300018060	Tropical Peatland	MMQKILNSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMALRSPSIFYFVK
Ga0137408_14169411	3300019789	Vadose Zone Soil	MIQRILSSKNFVACLLAAVMGMALYFKLPFPAENAFL
Ga0193751_11709331	3300019888	Soil	MMQKILNSKNFVACLLAAATGMTLYFRVPFPDENVFLQVMVLRSPSIFY
Ga0210407_106269763	3300020579	Soil	MMQRILNSKNLVAFVLAAATGMTLYFRMPFPEGNIFLRVMALR
Ga0210403_113491572	3300020580	Soil	MQRILNSKNLVAFVLAAATGMTLYFRMPFPESNIFLRVMALRS
Ga0210399_110119831	3300020581	Soil	MIQRILNSRNFVACLLAAVTGMALYFELPFPTGNVFVKLIP
Ga0210385_108018061	3300021402	Soil	MMQKILNSKNFVACLLAAATGMTLYFQVPFPEENVFLQVMALRS
Ga0210386_108224661	3300021406	Soil	MMQKILNSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMALRSPSIFYFVKYS
Ga0210384_118499762	3300021432	Soil	MIGRILNSKNFVACLLAAATGMVLYIKVPFPEGNLFFELMFLWAR
Ga0210390_101036351	3300021474	Soil	MQRILNSKNFVAFVLAAATGMTLYFRMPFPEGNIFLRVMALRSPSA
Ga0126371_117471461	3300021560	Tropical Forest Soil	MIQRLLNSKNFVACLLTAATGMILYIRMPFPEDNLF
Ga0242669_11230422	3300022528	Soil	MMQKILNSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMALRS
Ga0212123_102831253	3300022557	Iron-Sulfur Acid Spring	MIQRILNSKNFVACLLAAATGMVLYIKMPFPEGNLFFELMFLWARP
Ga0224563_10196332	3300022731	Soil	MMQKILSSKNFVACLLAAATGMTLYFRVPFPEENVFL
Ga0224550_10557921	3300022873	Soil	MMQKILNSKNFVACLLAAATGMTLYFRVPFPEENVFL
Ga0208456_10573011	3300025441	Peatland	MIQRILNSKNLVAFVLAAATGMALYFRMPFREDNIFLQVMALRSPSVF
Ga0208034_10696361	3300025442	Peatland	VIQRILNSKNFIAFVLASATGMTLYFLFPFPEGNLFLRLIAVNA
Ga0209648_101610804	3300026551	Grasslands Soil	MMQKIINSKNLVAFVLAAATGMTLYFRVPFPETNTFLLVMALRSPSAFEA
Ga0209730_10215442	3300027034	Forest Soil	MMQRILNSKNLVAFVLAAATGMTLYFRVPFPEGNIFLGVMALRSPSA
Ga0209731_10309852	3300027326	Forest Soil	MMQKIINSKNLVAFVLAAATGMMLYFRVPFPETNTFLL
Ga0209626_10952603	3300027684	Forest Soil	MMQKILNSKNFVACLLAAATGMTLYFRVPFPDENIFLQVMAQRSSSIF
Ga0209073_104141761	3300027765	Agricultural Soil	MMQRILNSKNLVAFVLAAATGMTLYFRMPFPEGNIF
Ga0209655_102869682	3300027767	Bog Forest Soil	MMQKILNSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMALRSPSIFYFVKY
Ga0209068_100078188	3300027894	Watersheds	MIQRILTSRNFVACLLAAVTGMALYFELPFPTENV
Ga0209526_108546141	3300028047	Forest Soil	MMHRILNSRNFVARLLAAATGMVLYSKQPFYRENVSLQVMALRVPFVH
Ga0307504_102862321	3300028792	Soil	VIQRILNSRNFVACLLAAATGIAFYLKLPFPTENVFL
Ga0311352_114802121	3300029944	Palsa	MMQKILSSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMALRSPSIFFFVKYS
Ga0311338_120732532	3300030007	Palsa	VIQRILNSKNFIAFVLASATGMTLHFLLPFPEGNLFL
Ga0302182_104666601	3300030054	Palsa	MIQRVLNSKNFIAFVLASATGMTLYFLLPFPEGDIFLRLIS
Ga0302176_101997401	3300030057	Palsa	VTQRILNSKNFIAFVLASATGMTLYFLLPFPEGNLFLRLI
Ga0311353_115406891	3300030399	Palsa	MIQRILNSRNFVACLLAAATGMALYFELPFPTGNVFLHLMALRA
Ga0265754_10063553	3300031040	Soil	MMQKILSSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMALRSPSIFYFV
Ga0265760_102758592	3300031090	Soil	VIQRILNSKNFIAFVLASATGMTFYFLLPFPEGNLFLRLIAA
Ga0170824_1062407461	3300031231	Forest Soil	MMQRIINSKNLVAFVLAAATGMALYFRVPFPEGNTF
Ga0302324_1016573491	3300031236	Palsa	MIQRILNSRNFVACLLAAATGMALYFELPFPTANVFLHLMA
Ga0307372_104201412	3300031671	Soil	MIQRILNSKNFIAFVLASATGMTLYFLLPFPEGNLFLRLI
Ga0307372_104588432	3300031671	Soil	MMQKILSSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMALRSPSIFFFV
Ga0307373_103109413	3300031672	Soil	MMQKILNSKNFVACLLAAATGMTLYFRVRFPEDNVFLQVMAQRSP
Ga0307475_114743272	3300031754	Hardwood Forest Soil	MMQKILNSKNFVACLLAAATGMTLYFRVPFPEENVFLQVMA
Ga0318533_114001061	3300032059	Soil	MIQRILNSKNLVAFVLAAATGMTLYFRVPFPEGNVFVRVIALRSPSAFKVLK
Ga0307471_1035436861	3300032180	Hardwood Forest Soil	MMQRILNSKNLVAFVLAAATGMTLYFRVPFPEGNTFL
Ga0335085_118654082	3300032770	Soil	MIQRILNSKNFIAFVLASATGMTLYFLLPFPEGNLFLRLIGV
Ga0326728_108468321	3300033402	Peat Soil	MIQRILNSKNLVAFVLAAATGMILYFRMPFREDNIFLQVMALRSP
Ga0326728_110290321	3300033402	Peat Soil	MIQRILNSKNLVAFVLAAATGMALYFRMPFREDNIFLQVMALRSPSVFQVLKYSY
Ga0326724_0458167_1_138	3300034091	Peat Soil	MIQRILNSKNLVAFVLAAATGMALYFRMPFREDNIFLQVMALRSPS

Hidden Markov Model


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