Metagenome Family F099544

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099544
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	50 residues
Representative Sequence	MVLLYFSYLIIVVNILILSVGYVANIAFIGSFLGGLMAIGTDPIILILGAL
Number of Associated Samples	48
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	15.38 %
% of genes near scaffold ends (potentially truncated)	12.62 %
% of genes from short scaffolds (< 2000 bps)	11.65 %
Associated GOLD sequencing projects	40
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (96.117 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (43.689 % of family members)
Environment Ontology (ENVO)	Unclassified (93.204 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (50.485 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 88.24% β-sheet: 0.00% Coil/Unstructured: 11.76%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF04461	DUF520	14.56
PF08666	SAF	9.71
PF02668	TauD	5.83
PF01212	Beta_elim_lyase	3.88
PF13472	Lipase_GDSL_2	2.91
PF05050	Methyltransf_21	1.94
PF03486	HI0933_like	1.94
PF04893	Yip1	1.94
PF00815	Histidinol_dh	1.94
PF01513	NAD_kinase	1.94
PF13328	HD_4	1.94
PF01063	Aminotran_4	0.97
PF02812	ELFV_dehydrog_N	0.97
PF02852	Pyr_redox_dim	0.97
PF13489	Methyltransf_23	0.97
PF01546	Peptidase_M20	0.97
PF07992	Pyr_redox_2	0.97
PF16822	ALGX	0.97
PF12146	Hydrolase_4	0.97
PF00652	Ricin_B_lectin	0.97
PF13414	TPR_11	0.97
PF08410	DUF1737	0.97
PF01381	HTH_3	0.97
PF02274	ADI	0.97
PF01531	Glyco_transf_11	0.97
PF07687	M20_dimer	0.97
PF13599	Pentapeptide_4	0.97
PF16861	Carbam_trans_C	0.97
PF03031	NIF	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1666	Cyclic di-GMP-binding protein YajQ, UPF0234 family	Signal transduction mechanisms [T]	14.56
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	7.77
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	5.83
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	3.88
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	3.88
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	3.88
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	3.88
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	3.88
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	3.88
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	3.88
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	3.88
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	3.88
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.88
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	3.88
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	3.88
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	3.88
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	3.88
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	3.88
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	3.88
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	3.88
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	3.88
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	1.94
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.94
COG0141	Histidinol dehydrogenase	Amino acid transport and metabolism [E]	1.94
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	1.94
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	1.94
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.94
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	1.94
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	1.94
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	1.94
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	1.94
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	1.94
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	1.94
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	0.97
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	0.97
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	0.97
COG4874	Uncharacterized conserved protein	Function unknown [S]	0.97
COG5190	TFIIF-interacting CTD phosphatase, includes NLI-interacting factor	Transcription [K]	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
All Organisms	root	All Organisms	3.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
cellular organisms	root	All Organisms → cellular organisms	3.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006190\|Ga0075446_10059573	Not Available	1166	Open in IMG/M
3300009420\|Ga0114994_10781083	Not Available	621	Open in IMG/M
3300009420\|Ga0114994_10794373	Not Available	615	Open in IMG/M
3300009526\|Ga0115004_10708305	Not Available	598	Open in IMG/M
3300027672\|Ga0209383_1074812	Not Available	1190	Open in IMG/M
3300027704\|Ga0209816_1239595	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300027791\|Ga0209830_10338289	Not Available	657	Open in IMG/M
3300031589\|Ga0307996_1194299	Not Available	529	Open in IMG/M
3300031598\|Ga0308019_10113590	Not Available	1096	Open in IMG/M
3300031598\|Ga0308019_10349684	Not Available	540	Open in IMG/M
3300031630\|Ga0308004_10051077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1801	Open in IMG/M
3300031659\|Ga0307986_10047308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2268	Open in IMG/M
3300031848\|Ga0308000_10233342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	698	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.06%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	71.84%
Oceanic	Environmental → Aquatic → Marine → Oceanic	24.27%
Coastal	Environmental → Aquatic → Marine → Coastal	1.94%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	71.84%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	24.27%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.94%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	43.69%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	28.16%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	23.30%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.94%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	1.94%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300020304	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556110-ERR599176)	Environmental	Open in IMG/M
3300020358	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX555925-ERR599009)	Environmental	Open in IMG/M
3300020372	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)	Environmental	Open in IMG/M
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental	Open in IMG/M
3300020382	Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)	Environmental	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300022836	Saline water microbial communities from Ace Lake, Antarctica - #421	Environmental	Open in IMG/M
3300023245	Saline water microbial communities from Ace Lake, Antarctica - #423	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300028197	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m	Environmental	Open in IMG/M
3300031143	Marine microbial communities from water near the shore, Antarctic Ocean - #422	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031589	Marine microbial communities from David Island wharf, Antarctic Ocean - #35	Environmental	Open in IMG/M
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental	Open in IMG/M
3300031599	Marine microbial communities from water near the shore, Antarctic Ocean - #71	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031638	Marine microbial communities from Western Arctic Ocean, Canada - CB4_surface	Environmental	Open in IMG/M
3300031644	Marine microbial communities from water near the shore, Antarctic Ocean - #5	Environmental	Open in IMG/M
3300031647	Marine microbial communities from water near the shore, Antarctic Ocean - #179	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031660	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #261	Environmental	Open in IMG/M
3300031695	Marine microbial communities from water near the shore, Antarctic Ocean - #233	Environmental	Open in IMG/M
3300031696	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262	Environmental	Open in IMG/M
3300031700	Marine microbial communities from Western Arctic Ocean, Canada - CB9_surface	Environmental	Open in IMG/M
3300031702	Marine microbial communities from David Island wharf, Antarctic Ocean - #37	Environmental	Open in IMG/M
3300031721	Marine microbial communities from water near the shore, Antarctic Ocean - #181	Environmental	Open in IMG/M
3300031848	Marine microbial communities from water near the shore, Antarctic Ocean - #3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0075446_100595194	3300006190	Marine	MVLLYFSYLIIVANILILSVGYVANIAFIGSFLGGLMAIGSDPII
Ga0075446_100595731	3300006190	Marine	MNKSLLFFSYLIIVANILILSVGYVANIAFMGSFLGGLMAIGTDPIILI
Ga0075447_102687232	3300006191	Marine	MVLLYFSYLIIVANILIFSVGYVANIALIGLFFGGLTAIGTDPIILILGALLGAGL
Ga0075445_100085736	3300006193	Marine	MVLLYFSYLIIVANIIILSASYVANIAFIGSFLGGLMAIGTDP
Ga0075445_100095841	3300006193	Marine	MVLLYFSYLIIVANILILSVGYIANIAFIGSFLGGLMAIGTDPIILILGALLGAGLV
Ga0075445_102693852	3300006193	Marine	MVLLYFSYLIIVANFLILSVGYVANIAFIGSFLGGLMAIGTDPIILILGALLGA
Ga0075445_102777382	3300006193	Marine	MNKALLYFSYLIIVANIIILSASYVANIAFIGSFLGGLMAIGTDP
Ga0114996_109971411	3300009173	Marine	MNKPLLYFSYLIIVANIIILSVGYVANIAFIGSYLGGLMAIGTDPIILLLGALLGGGL
Ga0114994_103137462	3300009420	Marine	MLLLYFSYLIIVANILILSVGYVANIAFIGSFLGSLM
Ga0114994_107810832	3300009420	Marine	MNKPLLYFSYLIIVANIIILSVGYVANIAFIGSFLGGLMAIGTDPIILILGALLGAGLVA
Ga0114994_107943731	3300009420	Marine	MNKSLLYFSYLIIVANILILSVGYVANIAFIGSFLGGLMAIGTDPIILILGALLGAGLVA
Ga0114997_104436142	3300009425	Marine	MLLLYFSYLIIVANILILSIGYVANIAFIGSFLGGLMAIGTDPIILLLGALLGGGLVAK
Ga0115007_105871321	3300009441	Marine	MVLLYFSYLIIVANILILSVGYVANIAFIGSFLGGLVAIGTDPIILIL
Ga0115003_107837331	3300009512	Marine	MNKPLLYFSYLIIVANILIFSIGYVANIAFIGSFLGGLMAIGTDPIILILGALLG
Ga0115004_101994671	3300009526	Marine	MNKALLYFSYLIVVANILILSIGYVTNIAFIGSFLGGLMAIGTDPI
Ga0115004_102617072	3300009526	Marine	MVLLYFSHLIIVANILILSVGYVANIAFIGLFLNGLIAIGTDPIILILGALLGAGLVA
Ga0115004_107083052	3300009526	Marine	MVLLYFSYLIIVANILILFVGYVANIAFIGLFLGGLMAIGTDPIILILGALLGAGLVAK
Ga0115000_103707471	3300009705	Marine	MVLLYFSYLIIVANILIFSVGYVANIAFMGSFFGGLMAIGTDPIILILGALLG
Ga0115000_108026412	3300009705	Marine	MVLLYFSYLIIGANIIILSAGYVANIAFIGSFLGGLIAIGTDPIILILGALLGAGLV
Ga0115001_109704321	3300009785	Marine	MVLLYFSYLIIVANILILSVGYIANIAFIGSYLGGLMAIGTDPIILI
Ga0133547_104389591	3300010883	Marine	MNKPLLYFSYLIIVANIIILSAGYVANIAFIGSFLGGLMA
Ga0133547_112137203	3300010883	Marine	MNKPLLYFSYLIIVVNIIILSAGYVANIAFIGSFLGGLMAIGTDPIILLLGALLG
Ga0211684_10178873	3300020304	Marine	MNKPLLYFSYLIVVTNIIFLSAGYVTNIAFIGSFLGGLIAIGIDPIILILGAL
Ga0211689_11335752	3300020358	Marine	MVLLYFSYLIIVVNILILSVGYVANIAFIGFFLGGLMAIGTDPIILILGALLGAGL
Ga0211683_100110541	3300020372	Marine	MNKALLYFSYLIIVANILILSVGYVANIAFIGSFLGGLMAIGTDPIILILGALLGAGLV
Ga0211683_100213851	3300020372	Marine	MVLLYFSYLVIVVNILILSVGYVANIVFIGSFLGGLMAIGTDPIILILGALLGAG
Ga0211683_100462081	3300020372	Marine	MIKPLLYFSYLIIVANILILSVGYVANIAFIGSFLGGLMAIGTDPII
Ga0211683_101247642	3300020372	Marine	MVLLYFSYLIIVVNILILSVGYVANIAFIGSFLGGLMAIGTDPIILIL
Ga0211683_102670281	3300020372	Marine	MVLLYFSYLIIVANILILSVGYIVNIAFIGSYLGGLMAIGTDPIILILG
Ga0211683_102793632	3300020372	Marine	MNKPLLYFSYLIIVANILILSVGYVANIAFISSFLGGLMAIGTDPIILILGALLGAG
Ga0211683_102872032	3300020372	Marine	MNKPLLYFSYLIMVANILILSVGYVANIAFIGSFLGGL
Ga0211682_100052958	3300020376	Marine	MNKPLLYFSYLIIVANILILSVGYVANIVFIGSFLGGLMAIGTDPI
Ga0211682_102685001	3300020376	Marine	MNKPLLYFSYLIIVANILILSVGYVANIAFIGSFLGGLMAIGTDPII
Ga0211682_102816041	3300020376	Marine	MVLLYFSYLIIVANTLILSVGYVANIAFIGSFLGGLMAIG
Ga0211686_100696841	3300020382	Marine	MNKLLLYFSYLIIVVNILILSFGYVANIAFIGSFLRGLMAIGTDPIILILGALLGAGLVA
Ga0211686_100962001	3300020382	Marine	MNKPLLYFSYLIIVANILILSVGYVANIAFIGSFL
Ga0211687_100208375	3300020396	Marine	MNKPLLYFSYLIIVANIIILSAGYVANIALIGSFLGGLMAIGTDPIILILGALLG
Ga0222654_10332831	3300022836	Saline Water	MVLLCFSYLIIVANILILSVGYVANIAFIGSFLGGLMAIGTDPI
Ga0222655_10110212	3300023245	Saline Water	MNKPLLYFSYLIIVANIIILSVGYVANIAFIGSFLGGLMAIGTDPI
Ga0209384_10097795	3300027522	Marine	MVLLYFSYLIIVANILILSVGYVANIAFIGSFLGGLMAIGTDPIILILGALLGAGL
Ga0209384_10200234	3300027522	Marine	MVLLYFSYLIIVANILILSVGYVANIAFIGLFFGGLTAIGTD
Ga0209482_11542312	3300027668	Marine	MVLLYFSYLIIVANILILSVGYVANIAFIGSFLGGLMAIGTDPIILIIGAL
Ga0209383_10458613	3300027672	Marine	MVLLYFSYLIIVANFLILSVGYVANIAFIGSFLGGLMAIGTDPIILILGAL
Ga0209383_10748121	3300027672	Marine	MNKSLLFFSYLIIVANILILSVGYVANIAFMGSFLGGLMAIGTD
Ga0209383_11076112	3300027672	Marine	MVLLYFSYLIIVANFLILSVGYVANIAFIGSFLGGLMAIGTDPIILILGALLGAGL
Ga0209816_12395951	3300027704	Marine	MVLLYFSYLIIVANILILSVGYVANIAFIGLFFGGLTAIGTDPIILILGALLGAGLVAK
Ga0209192_101964122	3300027752	Marine	MLLLYFSYLIIVANILILSIGYVANIAFIGSFLGSLMAIGTDPIILILGA
Ga0209192_102161891	3300027752	Marine	MALLYFSYLIIIANILILSVGYVANIAFIGLFLGGLMAIGTDPIILIL
Ga0209709_104357111	3300027779	Marine	MNKPLLYFSYLIIVVNIIILSAGYLANIAFIGSFLGGLMAIGTDPIILI
Ga0209830_103382892	3300027791	Marine	MNKALLYFSYLIVVANILILSIGYVTNIAFIGSFLGGLMAIGTDPIILMLGALLGAGLVA
Ga0209830_104887242	3300027791	Marine	MNKPLLYFSYLIIVANIIILSAGYVANIAFIGSFLGGLMAIGTDHIILILGALLGGGLV
Ga0209091_101534853	3300027801	Marine	MNKPLLYFSYLIIVVNIIILSTGYLANIAFIGSFLGGLMAIGTDPIIL
Ga0209090_105384921	3300027813	Marine	MNKALLYFSYLIVVANILILSIGYVTNIAFIGSFLGGLMAIGT
Ga0257110_12421622	3300028197	Marine	MVLLYFSYLIIVANILILSAGYVANIAFIGSFLVGLMAIGTDPIILILGAL
Ga0308025_11747133	3300031143	Marine	MVLLYFSYLIIVVNILILSVGYVANIAFIGSFLGGLMAIGTDPIILILGAL
Ga0308025_12965241	3300031143	Marine	MNKALLYFSYLIIVANILILSIGYVANIAFIGSFLGGLMAIGTDPII
Ga0308010_11963481	3300031510	Marine	MVLLYFSYLIIVANILIFSVGYVANIAFIDSFLGGLMAIGTDPIILI
Ga0307488_102631702	3300031519	Sackhole Brine	MVLLYFSYLIIVTNILILSVGYVASITFIGSFLGGLIAIGTDPII
Ga0307488_103710932	3300031519	Sackhole Brine	MVLLYFSYLIIVANILILSVSYVANIAFIGSFLGGLMAIGTDPIILIL
Ga0307996_11942992	3300031589	Marine	MNKPLLYFSYLIIVANILILSVGYVANIVFIDSFLGGLMAIGTDPIILILG
Ga0307996_12018091	3300031589	Marine	MVLLYFSYLVIVLNILILSVGYVANIVFIGSFLGGLMAIGTDTIILILGALLG
Ga0308019_100471451	3300031598	Marine	MNKPLLYFSCLIIVANILILSVGYVANIAFIGSFLGGLM
Ga0308019_101135901	3300031598	Marine	MVLLYFSYLIIVANILILSVGYVANIVFIGSFLGGLIAIGTDPIILILGALLGAGLVAKPYK
Ga0308019_101219172	3300031598	Marine	MVLLYFSYLIIVTNILILSVGYVANIAFIGSFLGGLIAIGTDP
Ga0308019_101406391	3300031598	Marine	MNKALLYFSYLIIVVNILILSIGYVANIAFIGSFLGGLMAIGTDPIILI
Ga0308019_101830561	3300031598	Marine	MNKSLLYFSYLIIVANILILSVGYVANIALIGSFLSGLMAIGTDPIILILGALLGTGLVA
Ga0308019_102968461	3300031598	Marine	MNKPLLYFSYLIIVANILILSVGYVANIAFIGSFLG
Ga0308019_103496841	3300031598	Marine	MILLYFSYLIIVSNIIILSAGYVANIAFIGSFLGGLMAIGTDPIILILGALLGAGLVA
Ga0308007_100693231	3300031599	Marine	MVLLYFSYLIIVANTLILSVGYVANIVFIGSFLGGLIAIGTDPIILILGALLGAGL
Ga0308007_101817971	3300031599	Marine	MVLLYFSYLIIVANILILSVGYVANIAFIGSFLGGL
Ga0308004_100510771	3300031630	Marine	MNKALLYFSYLIIVVNILILSIGYVANIAFIGSFLGGLMAIGTDPIILILGALLGAGLVA
Ga0308004_100679611	3300031630	Marine	MNKPLLYFSYLIIVVNIIILSAGYVANIALIGSFLG
Ga0308004_100901253	3300031630	Marine	MKPLLYFSYLIIVANILILSVGYVANIAFIGSFLGGLTAIGTDPIILILG
Ga0308004_101492674	3300031630	Marine	MNKPLLYFSYLIIVANILILSVGYVANIAFIGSFLGGLMAIGTDPIILI
Ga0308004_103277022	3300031630	Marine	MNKALLYFSYLIIVANILILSIGYVANIAFIGSFLGGLMAIGTDPIILIVGALLGAGLVA
Ga0302125_100551813	3300031638	Marine	MVLLYFSYLIIVANILILSVGYVANIAFIGFFLSGLMAIGTDPIILILGALLGAGLVA
Ga0308001_101528031	3300031644	Marine	MNKALLYFSYLIIVVNILILSIGYVANIAFIGSFLGGLMAIG
Ga0308001_102818321	3300031644	Marine	MVLLYFSYLIIVANILILSVGYVANIAFIGSFLGGLMAIGTDPI
Ga0308001_103091392	3300031644	Marine	MNEPLLYFSYLIIVANILILSVGYVANIAFVGSFLGGLIAIGTDPIILILGALLGAG
Ga0308012_103512202	3300031647	Marine	MVLLYFSYLIIVANILILSVGYVANIAFIGSFLGGLMAIGTDPIILILGALLGAG
Ga0307986_100473081	3300031659	Marine	MVLLYFSYLIIVANILILSVGYVANIAFIGSFLGGLMAIGTDPIILILGALLGAGLVAKP
Ga0307986_102511751	3300031659	Marine	MVLLYFSYLIIVVNILILSVGYVANIVFIGFFLGGLMAIGTDPIILILGALLGAG
Ga0307986_103190612	3300031659	Marine	MNKALLYFSYLIIVVNILILSIGYVANIAFIGSFLGGLMAIGTDPIILILGALLGA
Ga0307986_103331082	3300031659	Marine	MNKPLLYFSYLIIVVNIIILSAGYVANIALIGSFLGGLMAIGTDPIILI
Ga0307994_12439541	3300031660	Marine	MGLLFFSYLIIVANILFFVVSILGNIGFVGSFIGGLMAIGTDPIILILGAL
Ga0308016_101082033	3300031695	Marine	MKKSLLYFSILIIVSNILLIGVGFLANIAFIGSFIVGLMTVGTDPIILILGAL
Ga0308016_101892662	3300031695	Marine	MNKPLLYFSYLIIVTNILILSVGYVANIAFIGSFLGGLMAIGTDHII
Ga0308016_102179621	3300031695	Marine	MVLLYFSYLIIVANFLILSVGYLANIAFIGSFLGSLMAIGSDPIILILGALLGAGLV
Ga0308016_102502632	3300031695	Marine	MNKPLLYFSYLIIVANILILSVGYVANIAFIGSYLGGLIAIGTDPIILILGALLGA
Ga0308016_102712231	3300031695	Marine	MNKPLLYFSYLIIVANILILSVSYVANIAFIGSFLGGLMAIG
Ga0308016_102782011	3300031695	Marine	MVLLYFSYLIIVANILIFSVGYIANIAFIGSYLGGLMAIGTDPIILILGALLGAGLVA
Ga0308016_103836401	3300031695	Marine	MVLLYFSYLIIVTNILILSFGYIANIAFIGSYLSGLMAVGTDPIILILGALL
Ga0307995_12122202	3300031696	Marine	MVLLYFSYLIIVTNILILSFGYIANIAFIGSYLSGLMAVGTDPIILILGA
Ga0307995_12228971	3300031696	Marine	MVLLYFSYLIIVANILILSFGYIANIAFIGSYLGGLMAVGTDPIILILGALLGA
Ga0307995_12696591	3300031696	Marine	MNKPLLYFSYLIIVVNILILSVGYVANIAFIGSFLGGLMAIGTDPIILILGTLLGAGL
Ga0302130_10555522	3300031700	Marine	MNKPLLYFSYLIIVTNIIILSVGYVANITFIGSFLGGLMAIGTDPIILILGALLGAGL
Ga0307998_10080051	3300031702	Marine	MVLLYFSYLIIVANILILSVGYVANIAFIGSYLGGLMAIGT
Ga0307998_12504951	3300031702	Marine	MVLLYFSYLIIVANILILSVGYVVNIAFIGSFLGGLMAIGTDPIILILGALLGTGLVA
Ga0307998_12857991	3300031702	Marine	MNKPLLYFSYLIIVTNILILSVGYVANIAFIGSFLDSLMAIGTDPIILI
Ga0307998_13044072	3300031702	Marine	MILLYFSHLIIVANILILSVGYVANIAFIGSFLGGLMAIGTDPITL
Ga0308013_103030202	3300031721	Marine	MVLLYFSYLIIVTNFLILSVGYVANIAFIGSFLGSLMAIGSDP
Ga0308000_102333421	3300031848	Marine	MVLLYFSYLIIVVNILILSVGYVANIAFIGSFLGGLMAIGT
Ga0308000_103627851	3300031848	Marine	MNKSLLYFSYLIIVANILILSVGYVANIALIGSFLSGLMAIGTDPIILIL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099544

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences