Metagenome / Metatranscriptome Family F099571

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099571
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	41 residues
Representative Sequence	VDLQEKRQLDLAGQVAKVKAQARPWRAIIALVLAVAAA
Number of Associated Samples	80
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.00 %
% of genes near scaffold ends (potentially truncated)	97.09 %
% of genes from short scaffolds (< 2000 bps)	90.29 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.670 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.748 % of family members)
Environment Ontology (ENVO)	Unclassified (46.602 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (41.748 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.03% β-sheet: 0.00% Coil/Unstructured: 46.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01184	Gpr1_Fun34_YaaH	47.57
PF02627	CMD	6.80
PF02254	TrkA_N	3.88
PF00834	Ribul_P_3_epim	2.91
PF02080	TrkA_C	0.97
PF03729	DUF308	0.97
PF04525	LOR	0.97
PF00083	Sugar_tr	0.97
PF00474	SSF	0.97
PF01182	Glucosamine_iso	0.97
PF00175	NAD_binding_1	0.97
PF13401	AAA_22	0.97
PF13450	NAD_binding_8	0.97
PF11139	SfLAP	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1584	Succinate-acetate transporter SatP	Energy production and conversion [C]	47.57
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	6.80
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	6.80
COG0036	Pentose-5-phosphate-3-epimerase	Carbohydrate transport and metabolism [G]	2.91
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	0.97
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.97
COG4894	Putative phospholipid scramblase YxjI, Tubby2 superfamily	Lipid transport and metabolism [I]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.67 %
Unclassified	root	N/A	22.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.67 %
Unclassified	root	N/A	22.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.67 %
Unclassified	root	N/A	22.33 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.86 %
Unclassified	root	N/A	22.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.33 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	21.36 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.33 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	21.36 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.33 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	21.36 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.85 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.33 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	21.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.85 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.33 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	21.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.85 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.33 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	21.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.85 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005165\|Ga0066869_10107888	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005458\|Ga0070681_10427895	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300005530\|Ga0070679_101901832	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300005617\|Ga0068859_100969265	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300005764\|Ga0066903_104056730	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005764\|Ga0066903_107870130	Not Available	548	Open in IMG/M
3300006028\|Ga0070717_10193425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1778	Open in IMG/M
3300006028\|Ga0070717_12040282	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006059\|Ga0075017_101010759	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300006059\|Ga0075017_101524202	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300006162\|Ga0075030_101042528	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006176\|Ga0070765_101221124	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300006574\|Ga0074056_11552895	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300006755\|Ga0079222_10361365	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300006806\|Ga0079220_10204205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300009147\|Ga0114129_10574351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1464	Open in IMG/M
3300010043\|Ga0126380_11078326	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300010043\|Ga0126380_11340365	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300010043\|Ga0126380_12153522	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300010048\|Ga0126373_12789528	Not Available	545	Open in IMG/M
3300010359\|Ga0126376_10184447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1712	Open in IMG/M
3300010360\|Ga0126372_11864239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	646	Open in IMG/M
3300010362\|Ga0126377_10686368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1076	Open in IMG/M
3300010362\|Ga0126377_12091425	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300010376\|Ga0126381_105009306	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300010398\|Ga0126383_13097408	Not Available	543	Open in IMG/M
3300012096\|Ga0137389_10341317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1273	Open in IMG/M
3300012096\|Ga0137389_10893782	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300012199\|Ga0137383_10519514	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300012210\|Ga0137378_11220349	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012211\|Ga0137377_11369805	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300012211\|Ga0137377_11872587	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012948\|Ga0126375_10921582	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300012971\|Ga0126369_12096044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	653	Open in IMG/M
3300013306\|Ga0163162_11656762	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300014838\|Ga0182030_10628786	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300014968\|Ga0157379_10603440	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300016270\|Ga0182036_10174946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1551	Open in IMG/M
3300016294\|Ga0182041_10022375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3895	Open in IMG/M
3300016319\|Ga0182033_10450252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1098	Open in IMG/M
3300016319\|Ga0182033_11343428	Not Available	643	Open in IMG/M
3300016371\|Ga0182034_11749181	Not Available	547	Open in IMG/M
3300016387\|Ga0182040_10012858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4383	Open in IMG/M
3300016387\|Ga0182040_11554883	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300017933\|Ga0187801_10464689	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300017961\|Ga0187778_11164901	Not Available	539	Open in IMG/M
3300017973\|Ga0187780_10416018	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300017999\|Ga0187767_10323495	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300021402\|Ga0210385_10435885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	988	Open in IMG/M
3300021420\|Ga0210394_10794501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	827	Open in IMG/M
3300025928\|Ga0207700_10435055	Not Available	1154	Open in IMG/M
3300025928\|Ga0207700_11755837	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300026508\|Ga0257161_1047672	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300026551\|Ga0209648_10622109	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300027725\|Ga0209178_1133306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	849	Open in IMG/M
3300027765\|Ga0209073_10086788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1086	Open in IMG/M
3300027765\|Ga0209073_10208426	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300030741\|Ga0265459_10508786	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300031520\|Ga0272428_1376472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546	Open in IMG/M
3300031544\|Ga0318534_10334529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	872	Open in IMG/M
3300031549\|Ga0318571_10021023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1709	Open in IMG/M
3300031561\|Ga0318528_10093814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1569	Open in IMG/M
3300031564\|Ga0318573_10408724	Not Available	729	Open in IMG/M
3300031573\|Ga0310915_10486261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	877	Open in IMG/M
3300031668\|Ga0318542_10569545	Not Available	590	Open in IMG/M
3300031681\|Ga0318572_10195661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1179	Open in IMG/M
3300031681\|Ga0318572_10313928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	927	Open in IMG/M
3300031713\|Ga0318496_10423507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	736	Open in IMG/M
3300031719\|Ga0306917_10053574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2725	Open in IMG/M
3300031724\|Ga0318500_10380518	Not Available	700	Open in IMG/M
3300031748\|Ga0318492_10134122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1240	Open in IMG/M
3300031748\|Ga0318492_10273179	Not Available	876	Open in IMG/M
3300031748\|Ga0318492_10362873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	759	Open in IMG/M
3300031764\|Ga0318535_10118834	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300031765\|Ga0318554_10027595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3022	Open in IMG/M
3300031765\|Ga0318554_10643624	Not Available	596	Open in IMG/M
3300031771\|Ga0318546_10249506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1221	Open in IMG/M
3300031771\|Ga0318546_10491802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	860	Open in IMG/M
3300031771\|Ga0318546_10498777	Not Available	854	Open in IMG/M
3300031779\|Ga0318566_10232932	Not Available	914	Open in IMG/M
3300031779\|Ga0318566_10387587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	688	Open in IMG/M
3300031779\|Ga0318566_10637142	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300031797\|Ga0318550_10187401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	999	Open in IMG/M
3300031797\|Ga0318550_10237170	Not Available	884	Open in IMG/M
3300031798\|Ga0318523_10260073	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300031798\|Ga0318523_10518495	Not Available	589	Open in IMG/M
3300031799\|Ga0318565_10130357	Not Available	1215	Open in IMG/M
3300031845\|Ga0318511_10311727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	712	Open in IMG/M
3300031879\|Ga0306919_10625473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	830	Open in IMG/M
3300031890\|Ga0306925_10044379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4611	Open in IMG/M
3300031947\|Ga0310909_11513212	Not Available	534	Open in IMG/M
3300032008\|Ga0318562_10026632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3049	Open in IMG/M
3300032010\|Ga0318569_10546075	Not Available	540	Open in IMG/M
3300032042\|Ga0318545_10377422	Not Available	511	Open in IMG/M
3300032043\|Ga0318556_10290605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	854	Open in IMG/M
3300032067\|Ga0318524_10044373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2099	Open in IMG/M
3300032089\|Ga0318525_10186582	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300032180\|Ga0307471_104234970	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300032892\|Ga0335081_11152650	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300033290\|Ga0318519_10531680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	710	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.12%
Host-Associated	Host-Associated	3.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.23%
Aquatic	Environmental → Aquatic	3.88%
Plants	Host-Associated → Plants	3.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.26%
Sediment	Environmental → Aquatic → Sediment	2.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.67%
Loam	Environmental → Terrestrial → Soil → Loam	8.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.97%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.97%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066869_101078882	3300005165	Soil	VDLQEKRQLDLAGQVAKVKDQARPWRAIISLVLAVAAAIVSFTAGD
Ga0070681_104278952	3300005458	Corn Rhizosphere	VDLQEKRQLDLARQVAKVKDHTRPWRAIIALVLAVAAAIVS
Ga0070679_1019018322	3300005530	Corn Rhizosphere	VDLQEKRQLDLARQVAKVKDHTRPWRAIIALVLAVAAAIVSF
Ga0068859_1009692651	3300005617	Switchgrass Rhizosphere	VDLQEKRQLDLARQVAKVKDHTRPWRAIIALVLAVAAAIISFT
Ga0066903_1040567302	3300005764	Tropical Forest Soil	VDLHEQRQLDEMARQMAKVRARTRPWRAIIALVLAAAAGIVASLA
Ga0066903_1078701302	3300005764	Tropical Forest Soil	VDVQEKHQLDLAKQVASVKARARPWRAIIFSVLAVAAA
Ga0070717_101934253	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VDLQEKRQLDLAKQVASVKARARPWRAIIFSVLAVAAAA
Ga0070717_120402822	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VDLHEQRQLDEMARQMAKVRARTRPWRAIIALVLAAAAGIAATLA
Ga0075017_1010107592	3300006059	Watersheds	VDLHEQRQLERARQMAKVKARAKPWRSIFLLVLAGAAGITSSAAGR
Ga0075017_1015242021	3300006059	Watersheds	VDLQEKRQLDLAAQVTRVKARARPWRAITAGLLAIACGVIS
Ga0075030_1010425282	3300006162	Watersheds	VDLQEKRQLDLAAQVTRVKARARPWRAITAGLLAIACGIISW
Ga0070765_1012211241	3300006176	Soil	MDLQEKRQLDLAGQVARVRAQARPWRAIITLVLAVAAGIVSW
Ga0074056_115528951	3300006574	Soil	VDLQEKRQLDLAGQVAKVKDQARPWRAIIALVLAVAAAIVSFTA
Ga0079222_103613653	3300006755	Agricultural Soil	VDLQEKRQLDLARQVAKVKNQARPWRAIIALVLAVAAAI
Ga0079220_102042051	3300006806	Agricultural Soil	VDLHEQHQLDMAGQMAKVKARTRPWRAIIALVLAAAAGIVA
Ga0114129_105743514	3300009147	Populus Rhizosphere	VDLQEKRQLDLVKQAASVRARARPWRAIIFTVLAIAA
Ga0126380_110783261	3300010043	Tropical Forest Soil	MTVPERIAPVDLQEKRQLDLARQMARVKRHTRPWRSIIA
Ga0126380_113403651	3300010043	Tropical Forest Soil	MRRVVPVDLQEKRQLDLARQVAKVKAQARPWRAIIALVLA
Ga0126380_121535221	3300010043	Tropical Forest Soil	MRRAVPVDLQEKRQLDLARQVAKVKAQARPWRAIIAL
Ga0126373_127895281	3300010048	Tropical Forest Soil	VDLQEKRQLDLVRQAASVRARARPWRAIIFTVLAVAAACASYAFGRD
Ga0126376_101844473	3300010359	Tropical Forest Soil	MRRVVPVDLQEKRQLDLARQVAKVKAQARPWRAIIALVL
Ga0126372_118642392	3300010360	Tropical Forest Soil	VVDLQEKRQLDLAKQVASVKARARPWRAIIFSVLAVAA
Ga0126377_106863683	3300010362	Tropical Forest Soil	MAAPERTVPVDLQEKRQLDLARQVAKVKAHTRPWRSIIALVLAVGA
Ga0126377_120914252	3300010362	Tropical Forest Soil	MRRVVPVDLQEKRQLDLARQVAKVKAQARPWRAIIALV
Ga0126381_1050093061	3300010376	Tropical Forest Soil	VDVHEQRQLEVARQMARVKARARPWGAIFVLVLAAA
Ga0126383_130974081	3300010398	Tropical Forest Soil	VDLREERQLEVARQMAKVKARARPWRAIIALVLAAAAGII
Ga0137389_103413173	3300012096	Vadose Zone Soil	VDLQEKRQLDLAKQVASVKARARPWRAIIFSVLAIVAAGASYAFGNDLN
Ga0137389_108937822	3300012096	Vadose Zone Soil	VDLHEQRQLERAQQMAKVKARAKPWRSIFLLVLAGAAGITSSAAGRDF
Ga0137383_105195141	3300012199	Vadose Zone Soil	MRRVVPVDLQEKRQLDLARQMAKVKDQARPWRAIIALVLAVAAAIVS
Ga0137378_112203491	3300012210	Vadose Zone Soil	LHEQRQLDMARQLAEVKARARPWRAIIALVLAAAAGILASIA
Ga0137377_113698051	3300012211	Vadose Zone Soil	VDLHEQRQLDMAKQLAEVKARARPWRAIIALVLAAAA
Ga0137377_118725871	3300012211	Vadose Zone Soil	VDLHEQRQLDVARQLAEVKARARPWRAIIALVLAAAAGILASTA
Ga0126375_109215822	3300012948	Tropical Forest Soil	VDLQEQRQLDLAEQMAKVKERTRPWRAIIALVLAVVAAGV
Ga0126369_120960442	3300012971	Tropical Forest Soil	VDLHEQHQLDMAGHVAKVKARTRPWRAIIALVLAAAAGIVASL
Ga0163162_116567621	3300013306	Switchgrass Rhizosphere	MRRVVRVDLQEKRQLDLARQVAKVKDHTRPWRAIIALVLAV
Ga0182030_106287861	3300014838	Bog	VDLQEKHQIDLTGSVAKVKERARPWRAIIALVLAIAS
Ga0157379_106034403	3300014968	Switchgrass Rhizosphere	MRRPVRVDLQEKRQLDLARQVAKVKDHTRPWRAIIALVLAVAAAIVSFTA
Ga0182036_101749461	3300016270	Soil	VDLQEKRQLDLSAQVTKVKARARPWRAIIAGLLAIA
Ga0182041_100223751	3300016294	Soil	VDLQEKRQLDLARQVAKVKAHTRPWRAIIALILAVLAAIVS
Ga0182033_104502523	3300016319	Soil	LYGGIAVDLQEKRQLDVVKQAATVRARARPWRAIIFTVLA
Ga0182033_113434281	3300016319	Soil	MDLQEKRQLDLAKQVASVRARTRPWRAIIFTVLAVAAAVASYAFGR
Ga0182034_117491812	3300016371	Soil	VDLQEKRQLDVARQVAKVKAQARPWRAIIATVLAVGAAIVSITADSITPN
Ga0182040_100128581	3300016387	Soil	VDLQEKRQLDLTKQVASVRERARPWRAIIFSVLAVV
Ga0182040_115548831	3300016387	Soil	VDLQEKRQLDLAGQVAMVKSQARPWRAIIALVLAVAAA
Ga0187801_104646892	3300017933	Freshwater Sediment	VDLQEKRQLDLANQMASVKARTRPWRAIIFSVLALAAASISYAFG
Ga0187778_111649012	3300017961	Tropical Peatland	VDRQEKHQLDLPKDVAAVKARARPWRAIIALILAVAAAGV
Ga0187780_104160181	3300017973	Tropical Peatland	VDLQEKRQLDLARQVAKVKDQARPWRSIIAVVLAVAAAVASFTAGDIT
Ga0187767_103234952	3300017999	Tropical Peatland	VDLQEKRQLDLAGQVAKVKAQARPWRAIIALVLAVAAA
Ga0210385_104358851	3300021402	Soil	VDLQEKRQLDLAKQAASSTARARPWRAILFSVLALAAAG
Ga0210394_107945011	3300021420	Soil	VDLQEKRQLDLAKQAASSTARARPWRAILFSVLALAAAGV
Ga0207700_104350552	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VDLHEQRQLDEMARQMAKVKARTRPWRAIIALVLAVAAGIVASAAG
Ga0207700_117558371	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VDLHEQRQLEVARQMAKVKARARPWRAIIALMLAAAA
Ga0257161_10476722	3300026508	Soil	VDLQEKRQHDIAGQMARVKRRAKPWRSIIAAVLAVLA
Ga0209648_106221092	3300026551	Grasslands Soil	VDLHEQRQLERAQQMAKVKARAKPWRSIFLLVLAGAAGITSSAAGRDFQYWTGHG
Ga0209178_11333063	3300027725	Agricultural Soil	VDLQEKRQLDLVKQAASVRARARPWRAIIFTVLAIA
Ga0209073_100867883	3300027765	Agricultural Soil	VDLQEKRQLDLVKQAASVRARARPWRAIIFTVLAIAAACVS
Ga0209073_102084261	3300027765	Agricultural Soil	VDLHEQHQLDMAGQMAKVKARTRPWRAIIALVLAAAAGI
Ga0265459_105087861	3300030741	Soil	VDLHEQRQLEMARQVAKVKARTRPWRAIIALVLAVAAGILAS
Ga0265459_113745222	3300030741	Soil	VDLKEKRQLDVAEHVAKVKARARPWRSIIALVIAIDK
Ga0272428_13764722	3300031520	Rock	VDLQEKHQIDLAGPVVRATDRVRPWRAIIALVLSVA
Ga0318534_103345291	3300031544	Soil	VDLQEKRQLDLVKQAASVRARARPWRAIIFTVLAV
Ga0318571_100210231	3300031549	Soil	VDLQEKRQLDVARQVAGVKARARPWRAIIFTVLAIVAAG
Ga0318528_100938143	3300031561	Soil	VDLQERHQLDLASQVAGVKARARPWRAIIFTVLAVVAAGIS
Ga0318573_104087242	3300031564	Soil	MDLQEKRRLDLAKQVAGVRARTRPWRAIIFTVLAI
Ga0310915_104862612	3300031573	Soil	VDLQEKRQLDLVKQAASVRARARPWRAIIFTVLAVAAAC
Ga0318542_105695452	3300031668	Soil	VDLQEEHQPKLTEQVAKVKVRTRPWRAIIALGLAIAAAGVSWAFGHKMK
Ga0318572_101956612	3300031681	Soil	VDLQEKRQLDLAAQVTRVKTHARPWRAIIAGLLAIVCGILSWHAGQH
Ga0318572_103139281	3300031681	Soil	VDLQEKRQLDLAKHAASVKARARPWRAIIFTVLAAC
Ga0318496_104235072	3300031713	Soil	VDLKEKRQLDLVNQAASVRARARPWRAIIFTALAIAAACVSYVF
Ga0306917_100535741	3300031719	Soil	VDLQEKRQLDLTKQVASVRERARPWRAIIFSVLAVVAGAVSY
Ga0318500_103805182	3300031724	Soil	MDLQEKRRLDLAKQVAGVRARTRPWRAIIFTVLAIAAAVISYAF
Ga0318492_101341223	3300031748	Soil	VDLQEKRQLDLVRQAASVRARARPWRAIIFTVLALAAAFT
Ga0318492_102731791	3300031748	Soil	VDLQEEHQPKLTEQVAKVKVRTRPWRAIIALGLAIAAAGVSWAFGHKMKNL
Ga0318492_103628732	3300031748	Soil	VDLQEKRQLDRGAQPAGVKARVRPWRVIIFSVLAIVA
Ga0318535_101188341	3300031764	Soil	VDLQEKRQLDLSAQVTKVKARARPWRAIIAGLLAIACGILS
Ga0318554_100275954	3300031765	Soil	VDLQEKRQLDLAKHAASVKARARPWRAIIFTVLAVAAAFASWAFGRDLK
Ga0318554_106436241	3300031765	Soil	VDLQEKRQLDLVRQAASVRARARPWRAIIFAVLALAAAFASYAFGRD
Ga0318526_100314431	3300031769	Soil	VDLQERRQLDAARAREQVAKVKARARPWRAIFALVVAV
Ga0318546_102495061	3300031771	Soil	VDLQEKRQLDLAKHAASVKARARPWRAIIFTVLAVAAAFASYAFGRDLKSL
Ga0318546_104918021	3300031771	Soil	VDLQEKRQLDLTKQVASVRERARPWRAIIFSVLAVVAGAVSYVSG
Ga0318546_104987771	3300031771	Soil	VDLQEEHQPKLTEQVAKVKVRTRPWRAIIALGLAIAAAGVSWAFGHK
Ga0318566_102329321	3300031779	Soil	VDLQEKRQLELAKQLASVKARTRPWRAIIFTVLAVAAAV
Ga0318566_103875872	3300031779	Soil	VDLKEKRQLDLVNQAASVRARARPWRAIIFTALAIAAACVSY
Ga0318566_106371421	3300031779	Soil	VDLHEQRQLDEMARQMAKVKSRTRPWQAIIALVLA
Ga0318557_101157281	3300031795	Soil	VDLQERRQLDAAREQMSKVKARARPWRAIFFLILAV
Ga0318550_101874011	3300031797	Soil	VDLQEKRQLDLAKHAASVKARARPWRAIIFTVLAVAAAFASWAFG
Ga0318550_102371702	3300031797	Soil	VDLQEKRQLDLAKQVAHVKARARPWRAIIFLVLALA
Ga0318523_102600732	3300031798	Soil	VDLQEKRQLDLARQVARVKDHARPWRAIIALVFAVAAA
Ga0318523_105184951	3300031798	Soil	VDLQEKRQLDLARQVAGVKARARPWRAIIFTVLAIAAAGV
Ga0318565_101303571	3300031799	Soil	VDLQEQRQLDLAKRMATVKARTRPWRAIIALVLAVVA
Ga0318511_103117271	3300031845	Soil	VDLQEKRQLDLAKHAASVKARARPWRAIIFTVLAVAAAFASWAFGRD
Ga0306919_106254731	3300031879	Soil	VDLQEKRQLDLVKQAASVRARARPWRAIIFTVLAVAAGCASFAF
Ga0306925_100443791	3300031890	Soil	VDLHEQRQLDEMARQMAKVKARTRPWQAIIALVLAAAA
Ga0310909_115132122	3300031947	Soil	VDLQEKRQLDLARQVAKVKAHTRPWRAIIALILAVLA
Ga0318562_100266324	3300032008	Soil	VDLQEKRQLDLVKQAASVRARARPWRAIIFTVLAIGAACVS
Ga0318569_105460752	3300032010	Soil	MDLQEKRQLDLAKQVASVRARTRPWRAIIFTVLAIAAAVVSYAFGRHL
Ga0318545_103774221	3300032042	Soil	VDLQEKRQLDLVKQAASVRARARPWRAIIFTVLAVAAACASYA
Ga0318556_102906052	3300032043	Soil	VDLQEKRQLDVARQVAGVKARARPWRAIIFTVLAIVAAGTSYA
Ga0318524_100443731	3300032067	Soil	VDLQERHQLDLASQVAGVKARARPWRAIIFTVLAVVAAGISYA
Ga0318525_101865821	3300032089	Soil	VDLQEKRQLDLARQVAKVKAHTRPWRAIIALILAVLAAIVSVAA
Ga0307471_1042349702	3300032180	Hardwood Forest Soil	VDLQEQRQLDLAKQMAKVKERTRPWRAIIALVLATVAAG
Ga0335081_111526502	3300032892	Soil	VDLQEKRQLDLARQMAKVKDQARPWRAIIALVLAVAAAFVSFT
Ga0318519_105316802	3300033290	Soil	VDLQEKRQLDLARQVAGVKARARPWRAIIFTVLAIAAAGVSF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099571

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences