Metagenome / Metatranscriptome Family F099573

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099573
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	63 residues
Representative Sequence	MYIEQRLASERHEERLKQAREERSAHQVAELHRMVKRQVRAERELIHAWQAVDQLRSVIQAVR
Number of Associated Samples	76
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.52 %
% of genes near scaffold ends (potentially truncated)	29.13 %
% of genes from short scaffolds (< 2000 bps)	81.55 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.029 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.214 % of family members)
Environment Ontology (ENVO)	Unclassified (27.184 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.903 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.03% β-sheet: 0.00% Coil/Unstructured: 32.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF02467	Whib	48.54
PF03109	ABC1	14.56
PF02551	Acyl_CoA_thio	5.83
PF02178	AT_hook	4.85
PF01636	APH	2.91
PF13622	4HBT_3	0.97
PF03861	ANTAR	0.97
PF00528	BPD_transp_1	0.97
PF13361	UvrD_C	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	14.56
COG1946	Acyl-CoA thioesterase	Lipid transport and metabolism [I]	5.83
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	98.06 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	98.06 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	90.29 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	11.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	5.83 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2.91 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2.91 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %
Unclassified	root	N/A	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001408\|JGI20206J14855_1014711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1327	Open in IMG/M
3300001593\|JGI12635J15846_10064108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2742	Open in IMG/M
3300002245\|JGIcombinedJ26739_100186054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1965	Open in IMG/M
3300002245\|JGIcombinedJ26739_100704955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	888	Open in IMG/M
3300003505\|JGIcombinedJ51221_10067142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1392	Open in IMG/M
3300003505\|JGIcombinedJ51221_10142983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	964	Open in IMG/M
3300004080\|Ga0062385_11011406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300005712\|Ga0070764_10966910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300005921\|Ga0070766_11253330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300006176\|Ga0070765_101063582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	765	Open in IMG/M
3300009759\|Ga0116101_1010140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1701	Open in IMG/M
3300010859\|Ga0126352_1104632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300010866\|Ga0126344_1128018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1202	Open in IMG/M
3300010867\|Ga0126347_1418920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1503	Open in IMG/M
3300010876\|Ga0126361_10354929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300010876\|Ga0126361_10997292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	937	Open in IMG/M
3300014168\|Ga0181534_10143253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1221	Open in IMG/M
3300014495\|Ga0182015_10095412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2071	Open in IMG/M
3300014501\|Ga0182024_10153851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3226	Open in IMG/M
3300017948\|Ga0187847_10549322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300019258\|Ga0181504_1296247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300019786\|Ga0182025_1331405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1394	Open in IMG/M
3300020582\|Ga0210395_10294553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1220	Open in IMG/M
3300020582\|Ga0210395_11204410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300021180\|Ga0210396_10355730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1291	Open in IMG/M
3300021180\|Ga0210396_10813743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	801	Open in IMG/M
3300021181\|Ga0210388_10603988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	959	Open in IMG/M
3300021402\|Ga0210385_10095087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2070	Open in IMG/M
3300021402\|Ga0210385_10903325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300021404\|Ga0210389_10098051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2255	Open in IMG/M
3300021404\|Ga0210389_10666574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	816	Open in IMG/M
3300021404\|Ga0210389_11462353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520	Open in IMG/M
3300021405\|Ga0210387_10448266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1145	Open in IMG/M
3300021406\|Ga0210386_10157435	Not Available	1903	Open in IMG/M
3300021433\|Ga0210391_10597715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	866	Open in IMG/M
3300021474\|Ga0210390_10239107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1537	Open in IMG/M
3300022498\|Ga0242644_1010653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	820	Open in IMG/M
3300022506\|Ga0242648_1080276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300022509\|Ga0242649_1043751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300022522\|Ga0242659_1131345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300022523\|Ga0242663_1094070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300022528\|Ga0242669_1110194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300022529\|Ga0242668_1114710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300022530\|Ga0242658_1192905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300022714\|Ga0242671_1041368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300022716\|Ga0242673_1112349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300022726\|Ga0242654_10088955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	951	Open in IMG/M
3300023563\|Ga0247530_113709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300025504\|Ga0208356_1001291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6092	Open in IMG/M
3300025588\|Ga0208586_1117430	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300027067\|Ga0208602_1000570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3912	Open in IMG/M
3300027072\|Ga0208238_1000241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2815	Open in IMG/M
3300027166\|Ga0208729_100346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1564	Open in IMG/M
3300027334\|Ga0209529_1019926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1135	Open in IMG/M
3300027609\|Ga0209221_1043828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1189	Open in IMG/M
3300027879\|Ga0209169_10553347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300027884\|Ga0209275_10511326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300027908\|Ga0209006_10047237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3873	Open in IMG/M
3300027908\|Ga0209006_10157044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1994	Open in IMG/M
3300028781\|Ga0302223_10314883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300028789\|Ga0302232_10041707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2466	Open in IMG/M
3300028801\|Ga0302226_10157097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	986	Open in IMG/M
3300028877\|Ga0302235_10020800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3580	Open in IMG/M
3300028877\|Ga0302235_10101359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1310	Open in IMG/M
3300028879\|Ga0302229_10309995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709	Open in IMG/M
3300028906\|Ga0308309_10525035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1025	Open in IMG/M
3300029882\|Ga0311368_10802717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M
3300029910\|Ga0311369_10502237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1031	Open in IMG/M
3300029943\|Ga0311340_10369536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1331	Open in IMG/M
3300029951\|Ga0311371_10598602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1418	Open in IMG/M
3300029999\|Ga0311339_10164116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2582	Open in IMG/M
3300030056\|Ga0302181_10115827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1311	Open in IMG/M
3300030503\|Ga0311370_10491472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1507	Open in IMG/M
3300030503\|Ga0311370_11124245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	860	Open in IMG/M
3300030520\|Ga0311372_10087853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	5729	Open in IMG/M
3300030520\|Ga0311372_10722249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1384	Open in IMG/M
3300030580\|Ga0311355_10058827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4466	Open in IMG/M
3300030743\|Ga0265461_11077713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	808	Open in IMG/M
3300030743\|Ga0265461_12306592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300030815\|Ga0265746_1002046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1961	Open in IMG/M
3300030815\|Ga0265746_1053293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300030888\|Ga0265769_123745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300031234\|Ga0302325_12218144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300031236\|Ga0302324_102918771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571	Open in IMG/M
3300031236\|Ga0302324_103495603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300031525\|Ga0302326_10029227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11066	Open in IMG/M
3300031708\|Ga0310686_102221699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	787	Open in IMG/M
3300031708\|Ga0310686_104010778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	991	Open in IMG/M
3300031708\|Ga0310686_112087799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656	Open in IMG/M
3300031708\|Ga0310686_119716596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1320	Open in IMG/M
3300031715\|Ga0307476_10120646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1867	Open in IMG/M
3300031823\|Ga0307478_10431281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1094	Open in IMG/M
3300031823\|Ga0307478_10801376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	789	Open in IMG/M
3300031823\|Ga0307478_10956802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300032515\|Ga0348332_11891213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	757	Open in IMG/M
3300032515\|Ga0348332_11892002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	718	Open in IMG/M
3300032515\|Ga0348332_12953953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	840	Open in IMG/M
3300032895\|Ga0335074_10016849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10291	Open in IMG/M
3300032895\|Ga0335074_10044981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6107	Open in IMG/M
3300032895\|Ga0335074_10053313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5560	Open in IMG/M
3300032895\|Ga0335074_10260951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2026	Open in IMG/M
3300032895\|Ga0335074_10578180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1131	Open in IMG/M
3300032895\|Ga0335074_11462089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.15%
Aquatic	Environmental → Aquatic	4.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.84%
Peat	Environmental → Terrestrial → Peat	20.39%
Freshwater	Environmental → Aquatic → Freshwater	4.85%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	20.39%
Loam	Environmental → Terrestrial → Soil → Loam	17.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	20.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.21%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	20.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	4.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.88%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.91%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.97%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001408	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023563	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300027067	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF007 (SPAdes)	Environmental	Open in IMG/M
3300027072	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF013 (SPAdes)	Environmental	Open in IMG/M
3300027166	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF033 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030888	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20206J14855_10147114	3300001408	Arctic Peat Soil	MYIEQCLASERHSERLRQAHDERTASQVAELHRMERRQERAERELLHAWQAVDHLRSVIQAVR*
JGI12635J15846_100641082	3300001593	Forest Soil	MYIEQRLASERHEERLKQAREERSAHQVAELHRMVKRQVRAERELINAWQAVDQLRSAIQAVR*
JGIcombinedJ26739_1001860544	3300002245	Forest Soil	MYIEQCLASERHAERLRQAHEERTASQVAELRRMERRQERAERELLHAWQAVDQLRSVIQAVR*
JGIcombinedJ26739_1007049551	3300002245	Forest Soil	MYIEQCLANERHTERLKQAHEAREAHQVVELHRMVKRQERAERELLHAWQAGDNLR
JGIcombinedJ51221_100671421	3300003505	Forest Soil	MYIEQRLASERHEERLKQAREERSAHQVAELHRMVKRQVRAERELIHAWQAVDQLRSVIQAVR*
JGIcombinedJ51221_101429831	3300003505	Forest Soil	MYIQQCLASERHDERLRKAREERTAHQIAELHRMERRQVRAERELLHAWQAMDQLRSVIAGR*
Ga0062385_110114062	3300004080	Bog Forest Soil	MYIEQRLASERHEERLKQAREERSAHQVAELHRMEKRQLRAERELIHAWQAVDHLRSMIQAVR*
Ga0070764_109669101	3300005712	Soil	MYIEQWLASERHTERLKQAHDKREAHQVAELHRMEKRQVRAERELLHAWQAVDHLRSVIQAAR*
Ga0070766_112533302	3300005921	Soil	RTQCEEVFTTMYIEQWLASERHTERLKQAHDKREAHQVAELHRMEKRQVRAERELLHAWQAVDHLRSVIQAAR*
Ga0070765_1010635822	3300006176	Soil	MYIEQRLASERHEERLRQAREERSAHQVAELHRMVKRQVRAERELIHAWQAVDHLRSVIQAVR*
Ga0116101_10101402	3300009759	Peatland	MRRGLTTMYIEQCLARDRHKERLKQAREESAGHQVAVLHRMERRRERAERELLHVWQAVDQLRSAMVAR*
Ga0126352_11046322	3300010859	Boreal Forest Soil	MYIEQCLASERHEERLRQAHDERTASQVAELHRMERRRERAERELLHAWQAVDQLRSVIQAVR*
Ga0126344_11280183	3300010866	Boreal Forest Soil	MYVEQCLARDRHEERLSQARAERAAHRVAELHRMEKRQERAERELLHVWKAVDQLRSALQVAR*
Ga0126347_14189202	3300010867	Boreal Forest Soil	MYIEQCLANERHAERLRQAHEERSARQVAELHRMEKRQLRAERELLRAWQAVDHLRSVIQAVRY*
Ga0126361_103549291	3300010876	Boreal Forest Soil	MYIEQCLASERHEERLKQAHEERSAHQVAELHRMEKRQVRAERELLHAWQAVDQLRSAIQAVRY*
Ga0126361_109972922	3300010876	Boreal Forest Soil	MYIEQWLATERHTERLKQAHEEREAHQVAELHRMVKRQARAERELIHAWQAVDHLRSVIQAAR*
Ga0181534_101432533	3300014168	Bog	MYIEQCLARDRHEERLKQARQESAAHQAAVLHKMEKRRERAERELLHVWQAVDRLRSTMQVAR*
Ga0182015_100954121	3300014495	Palsa	MYIEQCLARERHSERLRQAHEERTASQVAELHRMERRQERAERELLHAWQAVDQLRSVIQAVR*
Ga0182024_101538515	3300014501	Permafrost	MRRGLFIMHMYIEQCLARDRHEERLKQAQAETTAHRVAVLNRMERRRVRAERELLHAWQAVDQLRARMQVAR*
Ga0187847_105493222	3300017948	Peatland	MYIEQRLASERHEERLRQAHEERSAHQVAELHRMVKRQVRAERELIHAWQAVDQLRSVIQSVR
Ga0181504_12962472	3300019258	Peatland	MYIEQCLARDRHEERLKQARQESAAHQAAVLHKMEKRRERAERELLHVWQAVD
Ga0182025_13314053	3300019786	Permafrost	MYIEQCLARERHSERLRQAHEERTASQVAELHRMERRQERAERELLHAWQAVDQLRSVIQAVR
Ga0210395_102945533	3300020582	Soil	MYIQQCLASERHDERLRKAREERTAHQIAELHRMERRQVRAERELLHAWQAMDQLRSVIAGR
Ga0210395_112044101	3300020582	Soil	MYIEQRLARERHEERLKQAREERSAHQVAELHRMVKRQVRAERELIHAWQAVDQLRSVIQAVR
Ga0210396_103557301	3300021180	Soil	MYIEQRLASERHEERLKQAREERSAHQVAELHRMVKRQVRAERELIHAWQAVDQLRSVIQAVR
Ga0210396_108137432	3300021180	Soil	MYIEQRLASERHEERLRQAHEERSAHQVAELHRRVKRQARAERELIHAWQAVDQLRSVIQAVR
Ga0210388_106039882	3300021181	Soil	MYIEQCLANERHTERLKQAHEAREAHQVVELHRMVKRQERAERELLHAWQAVDNLRSVIQAAR
Ga0210385_100950872	3300021402	Soil	MYIEQRLASERHEERLRQAHEERSAHQVAELHRRVKRQVRAERELIHAWQAVDQLRSAIQAVR
Ga0210385_109033251	3300021402	Soil	MHMYLEQCLARDRHEERLRQAREERDAHQVVVLHRMEKRRERAERELLDVWQAVDQ
Ga0210389_100980512	3300021404	Soil	MYIEQCLARERHAERLRQAHQERSAHQVAELRRMEKRQVRAERELLHAWQAVDHLRSVIQAVRY
Ga0210389_106665741	3300021404	Soil	MYIEQCLANERHTERLKQAHEAREAHQVVELHRMVKRQERAERELLHAWQAVDNL
Ga0210389_114623531	3300021404	Soil	HTERLKQAHEAREAHQVVELHRMVKRQERAERELLHAWQAVDHLRSVIQAAR
Ga0210387_104482662	3300021405	Soil	MYIEQWLASERHTERLKQAHEEREAHQVAELHRMVKRQVRAERELIHAWQAVDHLRSVIQAAR
Ga0210386_101574351	3300021406	Soil	MYIEQRLASERHEERLKQAHEERSAHQVAELHRMVKRQARAERELIHAWQAVDHLRSVIQAVR
Ga0210391_105977152	3300021433	Soil	MYIEQRLASERHEERLRQAREERSAHQVAELHRMVKRQVRAERELIHAWQAVDQLRSVIQAVR
Ga0210390_102391072	3300021474	Soil	MYIQQCLATERHDERLRQAREERTAHQVAELHRMERRQARAERELLHAWQAVDQLRSVIQAVR
Ga0242644_10106532	3300022498	Soil	MYIEQRLASERHEERLKQAHEERSAHQVAELHRMVNRQARAERELIHAWQAVDHLRSVIQAVR
Ga0242648_10802761	3300022506	Soil	MYIQQCLASERHDERLRKAREERTAHQIAELHRMERRQVRAERELLHAWQAVDHLRSVIQAAR
Ga0242649_10437512	3300022509	Soil	MYIEQRLASERHEERLRQAHEERSAHQVAELHRRVKRQARAERELIHAWQAVD
Ga0242659_11313452	3300022522	Soil	MYIEQRLASDRHEERLKQAREERSAHQVAELHRMVKRQVRAERELIHAWQAVDQLRSVIQAVR
Ga0242663_10940702	3300022523	Soil	MYIEQRLARDRHEERLKQAHEERSAHQVAELHRMVKRQVRAERELIHAWQAVDQLRSAIQAVR
Ga0242669_11101942	3300022528	Soil	MYIEQRLASERHEERLRQAHEERSAHQVAELHRRVKRQVRAERELIHAWQAVDQLRSVIQAVR
Ga0242668_11147101	3300022529	Soil	MYIQQCLASERHEERLKQARQERSAHQVAELHRMEKRRVRAERELLHAWQAVDQLRSVIQAV
Ga0242658_11929051	3300022530	Soil	MYIEQWLASERHTERLKQAHDKREAHQVAELHRMVKRQVRAERELIHAWQAVDHLRSVIQAAR
Ga0242671_10413681	3300022714	Soil	TTMYIEQCLASERHDERLRKAREERTAHQIAELHRMERRQVRAERELLHAWQAMDQFRSVIAGR
Ga0242673_11123491	3300022716	Soil	NGCDKHSCPIQARTQCEEVFTTMYIEQCLASERHAERLKQAHEKREAHQVVELHRMVKRQERAERELLHAWQAVDNLRSVIQAAR
Ga0242654_100889553	3300022726	Soil	MYIEQCLARERHAERLRQAHQERSAHQVAELRRMEKRQVRAERELLHAWQAVDHLRSVIQAV
Ga0247530_1137092	3300023563	Soil	MYIAQRLARDRHEERLKRAQDERIAHQVVELQKMEKRRERAERELLYTWQRVEQLRALL
Ga0208356_10012914	3300025504	Arctic Peat Soil	MYIEQCLASERHSERLRQAHDERTASQVAELHRMERRQERAERELLHAWQAVDHLRSVIQAVR
Ga0208586_11174301	3300025588	Arctic Peat Soil	QCLASERHEERLRQAHDERTASQVAELHRMERRRERAERELLHAWQAVDQLRSVIQAVR
Ga0208602_10005705	3300027067	Forest Soil	MYIEQRLASERHEERLRQAREERSAHQVAELHRMVKRQARAERELIHAWQAVDHLRSVIQAVR
Ga0208238_10002412	3300027072	Forest Soil	MYIEQRLASERHEERLKQAREERSAHQVAELHRMVKRQARAERELIHAWQAVDHLRSVIQAVR
Ga0208729_1003464	3300027166	Forest Soil	MYIEQRLASERHEERLRQAREERSAHQVAELHRMVKRQVRAERELIHAWQAVDQLRSAIQAVR
Ga0209529_10199262	3300027334	Forest Soil	MYIEQRLAVERHEERLKQAHEERSAHQVAELHRMVKRQVRAERELINAWQAVDQLRSAIQAVR
Ga0209221_10438282	3300027609	Forest Soil	MYIEQRLASERHEERLKQAREERSAHQVAELHRMVKRQVRAERELINAWQAVDQLRSAIQAVR
Ga0209169_105533471	3300027879	Soil	MYIEQWLASERHTERLKQAHDKREAHQVAELHRMEKRQVRAERELLHAWQAVDHLRSVIQAAR
Ga0209275_105113262	3300027884	Soil	MYIEQRLASERHEERLKQAREERSAHQVAELHRMVKRQVRAERELIHAWQAVDHLRSVIQAVR
Ga0209006_100472373	3300027908	Forest Soil	MYIEQCLASERHEERLRQAHDERTASQVAELHRMERRRERAERELLHAWQAVDQLRSVIQAVR
Ga0209006_101570444	3300027908	Forest Soil	MYIEQCLARDRHEERLKQAREESAAHQVAVLHRMERRRERAERELLHVWQAVDQLRSAMQAAR
Ga0302223_103148832	3300028781	Palsa	TMYIEQCLASERHEERLRQAHDERTASQVAELHRMERRQERAERELLHAWQAVDQLRSVIQAVR
Ga0302232_100417072	3300028789	Palsa	MHMYVEQRLARDRHEERLKRAREDSAAHQVVVLHRMEKRRERAERELLHVWQAIDQLRSTMQVAP
Ga0302226_101570972	3300028801	Palsa	MYIEQCLASERHEERLRQAHDERTASQVAELHRMERRQERAERELLHAWQAVDQLRSVIQAVR
Ga0302235_100208001	3300028877	Palsa	ASERHEECLRQAHDERTASQVAELHRMERRQERAERELLHAWQAVDQLRSVIQAAR
Ga0302235_101013591	3300028877	Palsa	MYIEQCLASERHEERLRQAHDERTASQVAELHRMERRQERAERELLHAWQAVDQLRSV
Ga0302229_103099952	3300028879	Palsa	MRRGLTTMYIEQCLARDRHEERLKQAREESAAHQVAVLHRMERRRERAERELLHVWQAVDQLRSAMQVAR
Ga0308309_105250351	3300028906	Soil	MYIEQRLASERHEERLRQAREERSAHQVAELHRMVKRQVRAERELIHAWQAVDHLRSVIQAVR
Ga0311368_108027171	3300029882	Palsa	MYIEQCLASERHEERLRQAHDERTASQVAELHRMERRQERAERELLHAWQAVDQLRSVIQAAR
Ga0311369_105022371	3300029910	Palsa	MYIEQCLARDRHEERLKQAREESAAHQVAVLHRMERRRERAERELLHVWQAVDQLRSAMVAR
Ga0311340_103695361	3300029943	Palsa	MYVEQCLARDRHEERLKQAHEERTAHQVAELLRMEKRRERAERELLHVWKAVDQLRST
Ga0311371_105986021	3300029951	Palsa	MYVEQCLARDRHEERLKQAHEERTAHQVAELLRMEKRRERAERELLHVWKAV
Ga0311339_101641163	3300029999	Palsa	MYVEQCLARDRHEERLKQAHEERTAHQVAELLRMEKRRERAERELLHVWKAVDQLRSTIQLVR
Ga0302181_101158272	3300030056	Palsa	MYIEQRLASERHEERLRQAHQERSAHQVVELHRMVKRQVRAERELIHAWQAVDQLRSAIQAVR
Ga0311370_104914721	3300030503	Palsa	MRQALMPDNVRTQCEEVFTTMYIEQRLASERHEERLRQAHQERSAHQVVELHRMVKRQVRAERELIHAWQAVDQLRSAIQAVR
Ga0311370_111242452	3300030503	Palsa	TTMYIEQCLARDRHEERLKQAREESAAHQVAVLHRMERRRERAERELLHVWQAVDQLRSAMVAR
Ga0311372_100878534	3300030520	Palsa	MYVEQCLARDRHEERLKQAHEERTAHQVAELLRMEKRRERAERELLHVWKAVDQLRSTIQFVR
Ga0311372_107222492	3300030520	Palsa	MYIEQCLARDRHEERLRQAREESAAHQVAVLNRMERRRERAERELLHVWQAVDQLRSAMQVAR
Ga0311355_100588275	3300030580	Palsa	NVRTQCEEVFTTMYIEQRLASERHEERLRQAHQERSAHQVVELHRMVKRQVRAERELIHAWQAVDQLRSAIQAVR
Ga0265461_110777132	3300030743	Soil	MHMYIEQCLARDRHVERLKQAREERAAHQVAELHRMEKRRERAERALLHVWQAVDQLRSAMQAAR
Ga0265461_123065921	3300030743	Soil	MYIEQRLASERHEERLKQAREERSAHQVAELHRMVKRQVRAERELIHAWQAVDQLRSAIQAVR
Ga0265746_10020461	3300030815	Soil	MYIEQRLASERHEERLRQAREERSAHQVAELHRMVKRQVRAERELINAWQAVDQLRSAIQAVR
Ga0265746_10532931	3300030815	Soil	TTMYIEQRLASERHEERLRQAREERSAHQVVELHRMVKRQVRAERELLHAWQAVDQLRSVIQAVRY
Ga0265769_1237451	3300030888	Soil	MYIEQCLASERHEERLRQAREERSAHQVAELHRMVKRQVRAERELIHAWQAVDQLRSAIQAR
Ga0302325_122181442	3300031234	Palsa	MRQALMPDNVRTQCEEVFTTMYIEQRLASERHEERLKQAREERSAHQVAELHRMVKRQARAERELIHAWEAVDQLRSVIQAVR
Ga0302324_1029187712	3300031236	Palsa	MYVEQCLARDRHEERLKQAHEERTAHQVAELLRMEKRRERAERELLHVWKAVDQLRS
Ga0302324_1034956032	3300031236	Palsa	TQCEEVFTTMYIEQRLASERHEERLKQAREERSAHQVAELHRMVKRQARAERELIHAWEAVDQLRSVIQAVR
Ga0302326_1002922714	3300031525	Palsa	MYVEQCLARDRHEERLKQAHEERTAHQVAELLRMEKRRERAERELLHVWKAVDQLR
Ga0310686_1022216992	3300031708	Soil	MYIEQCLANERHSERLRQAQDERTASQVAELHRMERRQERAERELLHAWQAVDQLRSVIQAVR
Ga0310686_1040107781	3300031708	Soil	IEQCLARDRHEERLKQAREESAAHQVAVLHRMERRRERAERELLHVWQAVDQLRSAMQAA
Ga0310686_1120877992	3300031708	Soil	EQCLARDRHEERLSQARQERAAHRVAELHRMEKRQARAERELLHVWKAVDQLRSAMQVAR
Ga0310686_1197165962	3300031708	Soil	MYIEQRLASERHEERLRQAREERSAHQVVELHRMVKRQVRAERELIHAWQAVDHLRSVIQAIH
Ga0307476_101206462	3300031715	Hardwood Forest Soil	MYIEQRLASERHEERLRQAHEERSAHQVAELHRMVKRQARAERELIHAWQAVDQLRSAIQAR
Ga0307478_104312813	3300031823	Hardwood Forest Soil	MYIEQCLANERHIERLKQAHEAREAHQVVELHRMVKRQERAERELLHAWQAVDHL
Ga0307478_108013762	3300031823	Hardwood Forest Soil	MYIEQWLASERHTERLKQAHDKREAHQVAELHRMVKRQVRAERELLHAWQAVDHLRSVIQAAR
Ga0307478_109568021	3300031823	Hardwood Forest Soil	MYIEQRLASDRHEERLKQAREERSAHQVVELHRMVKRQVRAERELIHAWQAVDQLRSVIQAVR
Ga0348332_118912132	3300032515	Plant Litter	MYIEQCLARDRHEERLKQAREESAAHQVAVLHRMERRRERAERELLHVWQAVDRLRSAMQVAR
Ga0348332_118920022	3300032515	Plant Litter	MHMYIEQCLARDRHEERLSQARQERAAHRVAELHRMEKRQARAERELLHVWKAVDQLRSAMQVAR
Ga0348332_129539531	3300032515	Plant Litter	MHMYIEQCLARDRHEERLKQAQQETAAHRAVVLHRMERRRERAERELLQAWQAVDQLRSRMQVAR
Ga0335074_1001684912	3300032895	Soil	MYIEHRLASERHTERLKQAHDKREAHQVAELHRMVKRQVRAERELLHAWQAVDHLRSVIQAAR
Ga0335074_100449813	3300032895	Soil	MYIEQRLASERHEERLRQAHEERSAHQVAELHRMVKRQARAERELIHAWQAVDQLRSAIQAVR
Ga0335074_100533136	3300032895	Soil	MYIEQRLASERHEERLKQAQEERSAHQVAELHRRVKRQARAERELLHAWQAVDQLRSVIQAVR
Ga0335074_102609512	3300032895	Soil	MFIEQCLASERHEERLKQAHEERMAHQVAELRKMEKRQVRAERELLHAWQAVDQLRSVIQAVR
Ga0335074_105781802	3300032895	Soil	MYIEQCLASERHVERLKQAHEKREAHQVAELHRMVKRQARAERELLHAWQAVDHLRSVIQATR
Ga0335074_114620891	3300032895	Soil	MYIEQRLARERHEERLRQAHKERSAHQVAELHRMVKRQVRAERELIQAWRAVDQLRSAIQAVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099573

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences