Metagenome Family F099688

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099688
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	139 residues
Representative Sequence	MNKADVCRELYNAAEFHLFGAGSWPADREASGAFWKLLNDFGLTASVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLELMGHLDDEEAETIYAMTSRHPEHVIRRHVLRVYFKFCNRSKRLN
Number of Associated Samples	87
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.46 %
% of genes near scaffold ends (potentially truncated)	51.46 %
% of genes from short scaffolds (< 2000 bps)	96.12 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.340 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.068 % of family members)
Environment Ontology (ENVO)	Unclassified (46.602 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.282 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.04% β-sheet: 7.01% Coil/Unstructured: 43.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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SCOP family	SCOP domain	Representative PDB	TM-score
d.394.1.1: N-terminal domain of Prp8 / Spp42	d3jb9a5	3jb9	0.57043
a.146.1.1: Telomeric repeat binding factor (TRF) dimerisation domain	d3bu8a_	3bu8	0.55788
a.146.1.1: Telomeric repeat binding factor (TRF) dimerisation domain	d3bqoa_	3bqo	0.55112
f.72.1.1: Double antiporter-like subunits from respiratory complex I	d4he8m_	4he8	0.53164
a.118.1.28: Proteasome/cyclosome repeat (PC repeat)	d4adya1	4ady	0.52653

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00580	UvrD-helicase	1.94
PF02776	TPP_enzyme_N	0.97
PF04392	ABC_sub_bind	0.97
PF06048	DUF927	0.97
PF09903	DUF2130	0.97
PF13473	Cupredoxin_1	0.97
PF13361	UvrD_C	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	1.94
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	1.94
COG3973	DNA helicase IV	Replication, recombination and repair [L]	1.94
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.97
COG5519	Predicted ATPase domain of Cch-like helicases, DUF927 family	General function prediction only [R]	0.97

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.31 %
Unclassified	root	N/A	43.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.34 %
Unclassified	root	N/A	43.69 %
Viruses	superkingdom	All Organisms → Viruses	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.34 %
Unclassified	root	N/A	43.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.34 %
Unclassified	root	N/A	43.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	55.34 %
Unclassified	root	N/A	43.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	54.37 %
Unclassified	root	N/A	43.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	51.46 %
Unclassified	root	N/A	43.69 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	50.49 %
Unclassified	root	N/A	43.69 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	40.78 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.91 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.97 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	37.86 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.91 %
Bradyrhizobium sp. JYMT SZCCT0428	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	1.94 %
Bradyrhizobium sp. 17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 17	0.97 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.97 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12207003	Not Available	593	Open in IMG/M
3300001417\|JGI20196J14858_1019958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	567	Open in IMG/M
3300005175\|Ga0066673_10308761	Not Available	923	Open in IMG/M
3300005339\|Ga0070660_100708820	Not Available	844	Open in IMG/M
3300005356\|Ga0070674_100586889	Not Available	940	Open in IMG/M
3300005434\|Ga0070709_10625830	Not Available	831	Open in IMG/M
3300005439\|Ga0070711_101156278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	668	Open in IMG/M
3300005445\|Ga0070708_100537520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1103	Open in IMG/M
3300005456\|Ga0070678_101033046	Not Available	756	Open in IMG/M
3300005467\|Ga0070706_100498617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1133	Open in IMG/M
3300005471\|Ga0070698_100892409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	834	Open in IMG/M
3300005569\|Ga0066705_10498133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	763	Open in IMG/M
3300005718\|Ga0068866_10573429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	758	Open in IMG/M
3300006050\|Ga0075028_100496675	Not Available	712	Open in IMG/M
3300006052\|Ga0075029_101027860	Not Available	570	Open in IMG/M
3300006055\|Ga0097691_1001479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17244	Open in IMG/M
3300006055\|Ga0097691_1036585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1853	Open in IMG/M
3300006059\|Ga0075017_100950898	Not Available	668	Open in IMG/M
3300006102\|Ga0075015_100158237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1183	Open in IMG/M
3300006102\|Ga0075015_100701013	Not Available	601	Open in IMG/M
3300006174\|Ga0075014_100482771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	691	Open in IMG/M
3300006174\|Ga0075014_100720864	Not Available	582	Open in IMG/M
3300006354\|Ga0075021_10217586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1169	Open in IMG/M
3300009088\|Ga0099830_10908607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	728	Open in IMG/M
3300009089\|Ga0099828_10279774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1499	Open in IMG/M
3300009089\|Ga0099828_10977929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	754	Open in IMG/M
3300009143\|Ga0099792_10073894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1727	Open in IMG/M
3300009143\|Ga0099792_10901878	Not Available	585	Open in IMG/M
3300009148\|Ga0105243_10780377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	940	Open in IMG/M
3300009176\|Ga0105242_11898055	Not Available	636	Open in IMG/M
3300009553\|Ga0105249_11152981	Not Available	846	Open in IMG/M
3300010159\|Ga0099796_10474012	Not Available	559	Open in IMG/M
3300010403\|Ga0134123_11124811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	810	Open in IMG/M
3300011269\|Ga0137392_10317464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1289	Open in IMG/M
3300011269\|Ga0137392_10411127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1123	Open in IMG/M
3300011271\|Ga0137393_10127030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	2109	Open in IMG/M
3300012189\|Ga0137388_11215889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	691	Open in IMG/M
3300012200\|Ga0137382_10408849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	957	Open in IMG/M
3300012200\|Ga0137382_10628019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	768	Open in IMG/M
3300012200\|Ga0137382_10959306	Not Available	615	Open in IMG/M
3300012202\|Ga0137363_10696366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	860	Open in IMG/M
3300012203\|Ga0137399_10264732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1413	Open in IMG/M
3300012203\|Ga0137399_11064230	Not Available	681	Open in IMG/M
3300012208\|Ga0137376_11068403	Not Available	691	Open in IMG/M
3300012361\|Ga0137360_11359002	Not Available	613	Open in IMG/M
3300012362\|Ga0137361_10359806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1335	Open in IMG/M
3300012582\|Ga0137358_10257167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1188	Open in IMG/M
3300012582\|Ga0137358_10397849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	932	Open in IMG/M
3300012582\|Ga0137358_10488952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	829	Open in IMG/M
3300012683\|Ga0137398_11137484	Not Available	536	Open in IMG/M
3300012917\|Ga0137395_10927367	Not Available	628	Open in IMG/M
3300012918\|Ga0137396_11051150	Not Available	586	Open in IMG/M
3300012923\|Ga0137359_10288390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1463	Open in IMG/M
3300012923\|Ga0137359_10860413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	783	Open in IMG/M
3300012923\|Ga0137359_11050733	Not Available	698	Open in IMG/M
3300012927\|Ga0137416_11261930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	667	Open in IMG/M
3300012960\|Ga0164301_11035270	Not Available	648	Open in IMG/M
3300012985\|Ga0164308_10734511	Not Available	854	Open in IMG/M
3300012989\|Ga0164305_11831819	Not Available	549	Open in IMG/M
3300013306\|Ga0163162_10364975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1577	Open in IMG/M
3300013772\|Ga0120158_10489802	Not Available	544	Open in IMG/M
3300014326\|Ga0157380_11236657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	792	Open in IMG/M
3300014501\|Ga0182024_11269915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	856	Open in IMG/M
3300014745\|Ga0157377_11456462	Not Available	542	Open in IMG/M
3300015374\|Ga0132255_105869396	Not Available	520	Open in IMG/M
3300017792\|Ga0163161_11263461	Not Available	641	Open in IMG/M
3300018433\|Ga0066667_10553032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	955	Open in IMG/M
3300018476\|Ga0190274_10153525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1948	Open in IMG/M
3300018481\|Ga0190271_11046460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	940	Open in IMG/M
3300018482\|Ga0066669_10952649	Not Available	772	Open in IMG/M
3300020199\|Ga0179592_10179149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	965	Open in IMG/M
3300021171\|Ga0210405_10088795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2437	Open in IMG/M
3300021403\|Ga0210397_10467065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	952	Open in IMG/M
3300025457\|Ga0208850_1001193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	7274	Open in IMG/M
3300025457\|Ga0208850_1047675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	713	Open in IMG/M
3300025481\|Ga0208079_1046720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 17	1018	Open in IMG/M
3300025481\|Ga0208079_1068870	Not Available	732	Open in IMG/M
3300025579\|Ga0207927_1141530	Not Available	508	Open in IMG/M
3300025899\|Ga0207642_10566896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	703	Open in IMG/M
3300025910\|Ga0207684_10765031	Not Available	818	Open in IMG/M
3300025910\|Ga0207684_11547419	Not Available	538	Open in IMG/M
3300025915\|Ga0207693_11048672	Not Available	621	Open in IMG/M
3300025940\|Ga0207691_11682841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	514	Open in IMG/M
3300025961\|Ga0207712_11146101	Not Available	693	Open in IMG/M
3300026075\|Ga0207708_11838072	Not Available	531	Open in IMG/M
3300026118\|Ga0207675_101169065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	789	Open in IMG/M
3300026319\|Ga0209647_1276129	Not Available	563	Open in IMG/M
3300026320\|Ga0209131_1140489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1234	Open in IMG/M
3300026341\|Ga0257151_1018250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	735	Open in IMG/M
3300026355\|Ga0257149_1060783	Not Available	550	Open in IMG/M
3300026374\|Ga0257146_1055002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	645	Open in IMG/M
3300026467\|Ga0257154_1023789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	901	Open in IMG/M
3300026482\|Ga0257172_1086516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	576	Open in IMG/M
3300026490\|Ga0257153_1083281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	641	Open in IMG/M
3300026494\|Ga0257159_1045832	Not Available	740	Open in IMG/M
3300026498\|Ga0257156_1076035	Not Available	696	Open in IMG/M
3300026514\|Ga0257168_1142986	Not Available	533	Open in IMG/M
3300026557\|Ga0179587_10284741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1063	Open in IMG/M
3300026920\|Ga0208575_1020289	Not Available	600	Open in IMG/M
3300027903\|Ga0209488_10234696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1377	Open in IMG/M
3300028802\|Ga0307503_10923626	Not Available	507	Open in IMG/M
3300031231\|Ga0170824_112191864	All Organisms → Viruses → Predicted Viral	1119	Open in IMG/M
3300032180\|Ga0307471_101994983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	728	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.47%
Host-Associated	Host-Associated	15.53%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.70%
Plants	Host-Associated → Plants	15.53%
Aquatic	Environmental → Aquatic	7.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.74%
Sediment	Environmental → Aquatic → Sediment	7.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.05%
Loam	Environmental → Terrestrial → Soil → Loam	10.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	8.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.77%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	7.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001417	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026920	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_122070031	3300000789	Soil	MTTKTTFQHEERDFEMAQNFKLAVPNEIRATAMNKADVCCELYKAAEFHLFGAGLWPADREASAAFWKLLDDFGLTANVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLDLMGHLDDEEAETIYATTSRHPEHVIRRHVLRVYFKFCNRSKRLN*
JGI20196J14858_10199582	3300001417	Arctic Peat Soil	MTTETIAQYEEGDFKMAQNAKLAEPKEIREMNKADICRELYSVADFHLFGAGAWPAGQDASTAFWKMLDDYGLMEGVPDKPGITRYTSLGMELNVEMMSIFAGAVKLWDIPLVLDLMGYLNDKEAAAIYAAESQHPEHVIRQHVRRVYLIFRN
Ga0066673_103087611	3300005175	Soil	MEKSEVCQKLHRAAEFHLLGPGLWPADQEAVAAFWRLLQKLGLTAVFPDEHGTVRYTPLGLELNVELFSIFAGAVGLWDIPLLLDLMGHLEDEEADAIYNTRSKHPEHVIRRHVLRVYFKFCNRSHLLN*
Ga0070660_1007088201	3300005339	Corn Rhizosphere	SWPADQEALSAFWQMLDDFGLTTVVSDGKHGTIQYTPLGVELNVELMSVFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRQVVRRVYFKFCNPSKRLN*
Ga0070674_1005868891	3300005356	Miscanthus Rhizosphere	EFHLFGAGSWPADREALSSFWKMLDDFGLTTAVSDGKPGTIQYTPLGLELNVELMSIFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRQLVRRVYFKFCNPSKFLN*
Ga0070709_106258302	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	AGSWPADREASGAFWKLLNDFGLTASVPDEPGTTQYTPLGLELHVELMSIFAGAVNLWDIPLLLDLMGHLDDDEADAIYTVKSKHPERVIRQHVRQVYFKFCNRSRYLN*
Ga0070711_1011562781	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PIGRAMQVGASHRPAAVPNARWCVWQPKEITTTTIKKKADVCRELYNAAEFHLFGAGSWPADREASAAFWKLLNDFGLTTNVPDEPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDDEADAIYTVKSKHPERVIRQHVRQVYFKFCNRSRYLN*
Ga0070708_1005375201	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVTRGHSYAARAEQEPLMTTETTAQHEEGNFKMEQNFKLIEPKEIRTAVMNRADVCRELYNAAEFHLFGAGSWPADRESSGAFWKLLNDFGLTANVPDEPGTTQYTPLGLELNVEPMSIFAGAVNLWDIPLLLDLMGHLDDEEAETIYATTSRHPEHVIRRHVLRVYFKFCNRSKRLN*
Ga0070678_1010330461	3300005456	Miscanthus Rhizosphere	MTQNFKLTDPKEIGDLNKADICRALYNAVEFHLFGAGSWPADQEASSAFWQMLDDFGLTTVVSDDGEPGTIYTPLGVELNVELMSIFAGAVGLWDIPLLLDLMGHLDDEEAERIDASISRHPEHVIRQLVRRVYFKFCNPSKRLN*
Ga0070706_1004986174	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKTTFQHEERDFEMAQNFKLAVPNEIRATAMNKADVCCELYKAAEFHLFGAGLWPADREASAAFWKLLDDFGLTANVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLDLMGHLDDEEAEAIYATTSRHPEHVIRRHVLRVYFKFCNRSKRLN*
Ga0070698_1008924092	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	WPADRESSGAFWKLLNDFGLTANVPDEPGTTQYTPLGLELNVEPMSIFAGAVNLWDIPLLLDLMGHLDDEEAEAIYATTSRHPEHVIRRHVLRVYFKFCNRSKRLN*
Ga0066705_104981331	3300005569	Soil	VCLKLHRAAEFHLLGPGLWPADQEAAAAFWRLLQQLGLTAVFPDEHGTFRYTPLGLELNVELLSIFAGAVSLWDIPLSLDLMGHLEDEEADAIYNTRSKHPEHVIRRHVLRVYFKFCNRSQLLH*
Ga0068866_105734292	3300005718	Miscanthus Rhizosphere	MTQNFKLTDPKEMGDLNKADICRALYKAVEFHLFGAGSWPADQEALSAFWQMLDDFGLTTVVSDDGEPGTIQYTPLGVELNVELMSVFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRRLVRRVYFKFCNPSKL
Ga0075028_1004966751	3300006050	Watersheds	MTAATYDLNVSRNKDDIRRELYKVADFHLFGAGSWPADPEALAAFWKLLADLGLTAAVPGEPDTIQYTPLGLELNVELVSIFAGGVELWDVPLVLSLTGYDEEADAIYATGSDESERVIRQHVRRVYLKFRNRSTSPN*
Ga0075029_1010278601	3300006052	Watersheds	QMLAKRSQKVTSGNRKSEMTDATYDLNGPRNKADICRELYNAADFHLFGAGSWPADREASVAFWKLLDDCGLTADVHGEPGTIQYTALGLELNVELMSIFAGAVELWDIPLALDFMGYLNDKEASAIYGASSQETERVIRQHVRRVYLIFRNRPTYPN*
Ga0097691_100147926	3300006055	Arctic Peat Soil	MTTETIAQYEEGDFKMAQNAKLAEPKEIREMNKADICRELYSVADFHLFGAGAWPAGQDASTAFWKMLDDYGLMEGVPDKPGITRYTSLGMELNVEMMSIFAGAVKLWDIPLVLDLMGYLNDKEAAAIYAAESQHPEHVIRQHVRRVYLIFRNCSKRPN*
Ga0097691_10365853	3300006055	Arctic Peat Soil	MNKADVCRELYNAAEFHLFGAGSWPADREAVAAFWKLLDDLGLTIDVPDKPSMSQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTASSEHSEHVIRRHVLRVYFKFCNRSKHLN*
Ga0075017_1009508982	3300006059	Watersheds	MTGATYDLTGSRNKADICRELYNAADFHLFGAGSWPADREASVAFWKLLDDCGLTADVHGEPGTIQYTALGLELNVELMSIFAGAVELWEIPLVLDLMGYLDDDEADAIYTVKSKHPERVIRQHVRQVYFKFCNRSRYLN*
Ga0075015_1001582371	3300006102	Watersheds	MKPKPGVRKDGNFNMTQNVKLTDPKETSDRNKANICRALYNAAELHLFGAGSWPADREASAAFWKLLDDCGLTTDVHGEPRTTQYTALGLELNVELMSIFAGAVNLWDIPTLLDLMGYLDDEEADTIYASEFRNPEYVIRQHVVRAYFKFCNRPKRLN*
Ga0075015_1007010132	3300006102	Watersheds	MVGTTYDLTGFRNKADICCELYNAADFHLFGAGSWPADREASVAFWKLLDDCGLTADVHGEPGTIQYTALGLELNVELMSIFAGAVELWDIPLALDFMGYLNDKEASAIYGASSQETERVIRQHVRRVYLIFR
Ga0075014_1004827712	3300006174	Watersheds	MTDATYDLNGSRNKADICRELYNAADFHLFGAGSWPADREALVAFWKLLDDCGLTADVHGEPGTIQYTALGLELNVELMSIFAGAVELWDIPLVLDLMGYLDDDEADAIYTVKSKHPERVIRQHVRPVYFKFCNRSRYLN*
Ga0075014_1007208641	3300006174	Watersheds	QMTAATYDLNVSKNKDDIRRELYKVADFHLFGAGSWPADPEALAAFWKLLADLGLTAAVPGEPDTIQYTPLGLELNVELVSIFAGGVELWDVPLVLSLTGYDKEADAIYATGSDESERVIRQHVRRVYLKFRNRSTSPN*
Ga0075021_102175862	3300006354	Watersheds	MNKADICRRPHAAAEFHLLGAGSWPADRESSESFWKMLGDLGLTEDVPGEPTTTQYTVLGQELKVELMMIFGGAVNLWDIPLLLDLMGHLDDDEADAIYSTTSKHPDRAIRRHVLRVYFKFCNRSKRLN*
Ga0099830_109086072	3300009088	Vadose Zone Soil	MTTETTAQHEVGNFKMVQNVGLTEPNEIRPTAMNKADVCCELYNAAEFHLFGAGSWPADREASGAFWKMLNDFGLTASVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLELMGHLEDEEAETIYATTSRHPEHVIRRHVLRIYFKFCNRSKLLN*
Ga0099828_102797742	3300009089	Vadose Zone Soil	MTTETTAQHEEGNFKLAQNVELAEPKEIRATAMNKAHVCCELYKAAEFHLFGAGSWPADREASAAFWKLLDDFGLTANVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLDLMSHLDDEEAETIYATTSRHPEHVIRRHVLRLYFKFCNRSKRLN*
Ga0099828_109779292	3300009089	Vadose Zone Soil	MTTETTAQHEVGNFKMVQNFGLTEPNEIRPTAMNKADVCCELYNAAEFHLFGAGSWPADREASGAFWKMLKDFGLTASVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLELMGHLEDEEAETIYATTSRHPEHVIRRHVLRIYFKFCN
Ga0099792_100738943	3300009143	Vadose Zone Soil	MAQNSKFTEPGETGATAMNRSDVYRELYNAVEFNLFGAGSWPADREASAAFWKLLDDLGLTTDDPDKPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSQHPEQVIRRHVLQVYFKFCNRSKRLN*
Ga0099792_109018781	3300009143	Vadose Zone Soil	RGRKFQDGRKNFNLTEPKEIRATAMNKADVCRELYNAAEFHLFGAGSWPADREASGAFWKLLNDFGLTASVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLELIGHLDDEEAETIYAMTSRQREHVIRRHVLRVSFKFCNRSKRLN*
Ga0105243_107803772	3300009148	Miscanthus Rhizosphere	MTQNFKLTDPKEIGDLNKADICRALYNAVEFHLFGAGSWPADQEASSAFWQMLDDFGLTTVVSDDGEPGTIYTPLGVELNVELMSVFAGAVGLWDIPLLLDLMGHLDDEEAETIDSSISRQPEHVIRQLVRRVYFKFCNPSKLLNRSEPVIQPARRGIKTRSGAPCKYARTPARRAVHEK
Ga0105242_118980551	3300009176	Miscanthus Rhizosphere	ITASVETETKDGNFKMTPNFKLTHPKEIGDLNKADICRALYNAVEFHLFGAGSWPADQEASSAFWQMLDDFGLTTVVSDDGEPGTIQYTPLGVELNVELMSVFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHAIRQVVRRVYFKFCNPSKRLN*
Ga0105249_111529811	3300009553	Switchgrass Rhizosphere	MTQNFKLTGPKEIGDLNKADICRALYNAVEFHLFGAGSWPADQEASSAFWQMLDDFGLTTVVSDDGEPGTIYTPLGVELNVELMSVFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRQLVRRVYFKFCNPTKLLN*
Ga0099796_104740121	3300010159	Vadose Zone Soil	PLSMRKKFKMAQNSKFTEPRETRATAMNRSDVYRELYNAVEFNLFGADSWPADREASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEAADAIYTSTSQHPEQVIRRHVLQVYFKFCNRSKRLN*
Ga0134123_111248112	3300010403	Terrestrial Soil	MTQNFKLTDPKEIGDLNKADICRALYNAVEFHLFGAGSWPADQEASSAFWQMLDDFGLTTVVSDGELATIQYTPLGVELNVELMSVFAGAAGLWDIPLLLDLMGHLDDEEAEMIDASISRHPEHVIRQVVRRVYFKFCNPS
Ga0137392_103174642	3300011269	Vadose Zone Soil	MTTETTAQHEVGNFKMVQNFGLTEPNEIRPTAMNKADVCCELYNAAEFHLFGAGSWPADREASGAFWKMLNDFGLTASVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLELMGHLEDEEAETIYATTSRHPEHVIRRHVLRIYFKFCNRSKLLN*
Ga0137392_104111272	3300011269	Vadose Zone Soil	MTTETTAQHEEGNFKLAQNVELAEPKEIRATAMNKAHVCCELYKAAEFHLFGAGSWPADREASAAFWKLLDDFGLTANVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLDLMSHLDDEEAETIYATTSRHPEHVIRRHVLRVYFKFCNRSKRLN*
Ga0137393_101270302	3300011271	Vadose Zone Soil	MTTETTAQHEVGNFKMVQNFGLTEPNEIRPTAMNKADVCCELYNAAEFHLFGAGSWPADREASGAFWKMLNDFGLTASVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLELMGHLEDEEAETIYATTSRHPEHVIRRHVLRVYFKFCNRSKRLN*
Ga0137388_112158891	3300012189	Vadose Zone Soil	EIRATAMNKAHVCCELYKAAEFHLFGAGSWPADREASAAFWKLLDDFGLTASVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLELMGHLEDEEAETIYATTSRHPEHVIRRHVLRIYFKFCNRSKRLN*
Ga0137382_104088493	3300012200	Vadose Zone Soil	MNRADVYRELYNAVESNLFGAGSWPADREASAAFWKLLDDLGLTTDDPDKPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLVLDLMGYLNDKEAAAIYAAESQHPEEVIRRHVLRVYFKFCNRSKRLN*
Ga0137382_106280191	3300012200	Vadose Zone Soil	WPADREASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSRHPEQVIRRHVLQVYFKFCNRSKRLN*
Ga0137382_109593061	3300012200	Vadose Zone Soil	AKARHRPTIDQALLQSRAWPADREASGAFWKLLNDFGLTASVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLELMGHLDDEEAETIYASTSRHSEHVIHQLVRRVYFKFRNRSKYLN*
Ga0137363_106963661	3300012202	Vadose Zone Soil	MNRSDVYRELYNAVEFNLFGAGSWPADPEASAAFWKLLDDLGLTTDDPDKPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSQHPEQVIRRHVLRVYFKFCNRSKRQN*
Ga0137399_102647322	3300012203	Vadose Zone Soil	MNRSDVYRELYNAVEFNLFGAGSWPADQEASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSQHPEQVIRRHVLQVYFKFCNRSKRLN*
Ga0137399_110642302	3300012203	Vadose Zone Soil	MAQNFRLTEPNGIRAPAFNKADICRQLYNAAEFHLFGAGSWPAEREAVVAFWKLLDDFGLTAAVPDEPRRIEYTPLGLELNVELMSIFSGAVNLWDIPLLLDLMGHLDDEEADAIYLTASTHPEHVIRRHVRRVYFK
Ga0137376_110684031	3300012208	Vadose Zone Soil	TAMNKADVCRELYNAAEFHLFGAGSWPADREASGAFWKLLNDFGLTASVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLELMGHLDDEEAETIYASTSRHSEHVIHQLVRRVYFKFRNRSKYLN*
Ga0137360_113590021	3300012361	Vadose Zone Soil	MTQNFNTTKSQEFRTKTMNKDDVCRELYRTADFHLFGAGSWPADREASAAFWKLLDDLELTTVPDKPGTSQLTPLGLELNVELISIFAGAVNLWDIPLVLDLMGYLNDKEAAAIYAAESQHPEHVIRQHVRRVYLIFRNCSKRPN*
Ga0137361_103598062	3300012362	Vadose Zone Soil	MTQNFNTTKSQEFRTKTMNKDDVCRELYRTADFHLFGAGSWPADREASAAFWKLLNDCGLTTDVPDEPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLVLDFMGYLNDKEAAAIYAAESQHPEHVIRQHVRRVYLIFRNCSKRPN*
Ga0137358_102571672	3300012582	Vadose Zone Soil	MNKDDVCRELYRVADFHLFGAGSWPADREASAAFWKLLDDLELTTVPDKPGTSQLTPLGLELNVELISIFAGAVNLWDIPLVLDLMGYLNDKEAAAIYAAESQHPEHVIRQHGRRVYLIFRNCSKRPN*
Ga0137358_103978491	3300012582	Vadose Zone Soil	MAQNSKFTEPRETGATAMNRADVYRELYNAVEFNLFGAGSWPADQEASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEAADVIYTSTSQHPEQVIRRHVLQVYFKFCNRSKRLN*
Ga0137358_104889522	3300012582	Vadose Zone Soil	MNKADVCRELYNAAEFHLFGAGSWPADREASGAFWKLLNDFGLTASVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLELMGHLDDEEAETIYAMTSRHPEHVIRRHVLRVYFKFCNRSKRLN*
Ga0137398_111374841	3300012683	Vadose Zone Soil	RKKFKMAQNSKFTEPRESRATAMNRSDVYRELYNAVEFNLFGAGSWPADQEASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSQHPEQVIRRHVLQVYFKFCNRSKRLN*
Ga0137395_109273672	3300012917	Vadose Zone Soil	MAQNSKFTEPRETTATAMNRADVYRELYNAVEFNLFGAGSWPADQEASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLVLDLMGHLDDDEAEMIYATTSQHPEQVIRRHVLRVYFKFCNRSKRLN*
Ga0137396_110511501	3300012918	Vadose Zone Soil	MAQNFRLTEPNGIRAPAFNKADICRQLYNAAEFHLFGAGSWPAEREAVVAFWKLLDDFGLTAAVPDEPRRIEYTSLGLELNVELMSIFSGAVNLWDIPLLLDLMGHLDDEEADAIYLTASTHPEHVIRRHVRRVYFKFCNRSHNLN*
Ga0137359_102883902	3300012923	Vadose Zone Soil	MNRSDVYRELYNAVEFNLFGAGSWPADREASAAFWKLLDDLGLTTDDPDKPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSQHPEQVIRRHVLRVYFKFCNRSKRLN*
Ga0137359_108604132	3300012923	Vadose Zone Soil	EFHLFGAGSWPADREASGAFWKLLNDFGLTASVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLELMGHLDDEEAETIYAMTSRHPEHVIRRHVLRVYFKFCNRSKRLN*
Ga0137359_110507331	3300012923	Vadose Zone Soil	MAQNTSSREPNEVRAAVMNKADICRELYNAAEFHLFGAGSWPADQEALAAFWKLLDDFGLTTDIPDKPGTTQYTPLGLELNVELMSIFAGGVELWGIPLLLNLMGHLDDEDAEAIYAAASRHPEHVIRRHVLRVYFKFCNRSERLN*
Ga0137416_112619302	3300012927	Vadose Zone Soil	MRKKFKMAQNSKFTEPRETRATAMNRSDVYRELYNAVEFNLFGAGSWPADREASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLVLDLMGYLNDKEAAAIYAAESQHPEQVIR
Ga0164301_110352702	3300012960	Soil	RALYNAVEFHLFGAGSWPADQEALSAFWQMLDDFGLTTVVSDGKPGTIQYTPLGVELNVELMSVFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRRLVRRVYFKFCNPSKLLS*
Ga0164308_107345111	3300012985	Soil	MTQNFKLTDPKEIGDLNKADICRALYNAVEFHLFGAGSWPADQEASSAFWQMLDDFGLTTVVSDDGEPGTIQYTPLGVELNVELMSVFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRQLVRRVYFKFCNRTKLLN*
Ga0164305_118318191	3300012989	Soil	WPADRESSSAFWKMLDDFGLTTVVSDVKSVTIQYTQYTHLGLELNVELMSIFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRQVVRRVYFKFCNPSKRLN*
Ga0163162_103649752	3300013306	Switchgrass Rhizosphere	LNKADICRALYNAVEFHLFGAGSWPADRESSSAFWKMLDDFGLTTVVSDGKPGTIQYTPLGVELNVELMSVFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRQLVRRVYFKFCNPSKRLN*
Ga0120158_104898021	3300013772	Permafrost	AEFHLLGPGSWPADRESSESFWKMLGDLGLTEDVPGEPTTTRYTVLGQELNVELMEIFAGAVNLWDIPLLLDLMGYLDDDEADAIYSTTSKHPDLVIRRHVLRVYFKFCNRSKLLN*
Ga0157380_112366571	3300014326	Switchgrass Rhizosphere	MTQNFKLTDPKEIGDLNKAHICRALYNAAEFHLFGAGSWPADRESSSAFWKMLDDFGLTTVVSDGKLGTIQYTPLGVELNVELMSVFAGAAGLWDIPLLLDLMGHLDDEDTETIDASISRHPERVIRQLVRRVYFKFCNRSKLLS*
Ga0182024_112699151	3300014501	Permafrost	MTLPEEITTTTIKKKADICRELYNAAEFHLFGAGSWPADQEFLAAFWKLLDDCGLTTDVPGKPGTTQYTALGLELNVELMSIFAGAVELWDIPLVLDQLGYLEDDEADAIYAVKSKCPERVIRQHVRQVYFKFCNRPR
Ga0157377_114564621	3300014745	Miscanthus Rhizosphere	MTQNFKLTDPKEIGDLNKADICRALYNAVEFHLFGAGSWPADQEASSAFWQMLDDFGLTTVVSDDGEPGTIYTPLGVELNVELMSVFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIR
Ga0132255_1058693961	3300015374	Arabidopsis Rhizosphere	SVATETKDGNFKMTQNVKLTDPKEIGDLNKADICRALYNAVEFHLFGAGSWPADQEASSAFWQMLDDFGLTTVVSDGKPGTIQYTPLGVELNVELMSVFAGAVGLRDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRQVVRRVYFKFCNPSKRLN*
Ga0163161_112634611	3300017792	Switchgrass Rhizosphere	KEIGDLNKAHICRALYNAAEFHLFGAGSWPADRESSSAFWKMLDDFGLTTVVSDGKLGTIQYTPLGVELNVELMSVFAGAAGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRQLVRRVYFKFCNPTKLLN
Ga0066667_105530322	3300018433	Grasslands Soil	KSEVCLKLHRAAEFHLLGPGLWPADQEAAAAFWRLLQQLGLTAVFPDEHGTFRYTPLGLELNVELLSIFAGAVSLWDIPLSLDLMGHFEDEEADAIYNTRSKHPEHVIRRHVLRVYFKFCNRSQLLH
Ga0190274_101535253	3300018476	Soil	MTQNFKLTDPKEIGDLNKAHICRALYNAAEFHLFGAGSWPADRESSSAFWKMLDDFGLTTVVSDVKSVTIQYTQYTPLGVELNVELMSVFAGAVGLWDIPLLLDLMGHLDDEEAETIDASLSRHPEHVIRQVVRRVYFKFCNPSKLLN
Ga0190271_110464602	3300018481	Soil	MTQNFKVTAPKDTGGLNKADICRALHNAAEFHLFGAGSWPADRESSSAFWKMLDDFGLTTVVSDGKPGTIQYTALGVELNVELMSVFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRQVVRRVYFKFCNRSKLLS
Ga0066669_109526491	3300018482	Grasslands Soil	MEKSEVCQKLHRAAEFHLLGPGLWPADQEAVAAFWRLLQKLGLTAVFPDEHGTVRYTPLGLELNVELFSIFAGAVGLWDIPLLLDLMGHLEDEEADAIYNTRSKHPEHVIRRHVLRVYFKFCNRSHLLN
Ga0179592_101791491	3300020199	Vadose Zone Soil	MNRSDVYRELYNAVEFNLFGAGSWPADQEASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSQHPEQVIRRHVLQVYFKFCNRSKRLN
Ga0210405_100887953	3300021171	Soil	MNKADVCRELYNAAEFHLFGAGSWPADREASAAFWKLLNDFGLTTNVPNEPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADEIYTSTSKHAEHVIHRHVLRVYSKFCNRSERPN
Ga0210397_104670652	3300021403	Soil	AGSWPADREASAAFWKLLNDFGLTTNVPNEPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADEIYTSTSKHAEHVPSTCPSCVFQILQSL
Ga0208850_10011939	3300025457	Arctic Peat Soil	MTTETIAQYEEGDFKMAQNAKLAEPKEIREMNKADICRELYSVADFHLFGAGAWPAGQDASTAFWKMLDDYGLMEGVPDKPGITRYTSLGMELNVEMMSIFAGAVKLWDIPLVLDLMGYLNDKEAAAIYAAESQHPEHVIRQHVRRVYLIFRNCSKRPN
Ga0208850_10476752	3300025457	Arctic Peat Soil	MNKADVCRELYNAAEFHLFGAGSWPADREAVAAFWKLLDDLGLTIDVPDKPSMSQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTASSEHSEHVIRRHVLRVYFKFCNRSKHLN
Ga0208079_10467201	3300025481	Arctic Peat Soil	MTTETIAQYEEGDFKMAQNAKLAEPKEIREMNKADICRELYSVADFHLFGAGAWPAGQDASTAFWKMLDDYGLMEGVSDKPGITRYTSLGMELNVEMMSIFAGAVKLWDIPLVLDLMGYLNDKEAAAIYAAESQHPEHVIRQHVRRVYLIFRNCSKRPN
Ga0208079_10688701	3300025481	Arctic Peat Soil	DRHVQKYKLTEPKEIRAAVMNKADVCRELYNAAEFHLFGAGSWPADREAVAAFWKLLDDLGLTIDVPDKPSMSQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTASSEHSEHVIRRHVLRVYFKFCNRSKHLN
Ga0207927_11415301	3300025579	Arctic Peat Soil	MNKADVCRELYNAAEFHLFGAGSWPADREAVAAFWKLLDDLGLTIDVPDKPSMSQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTASSEHSEHVIRRHVLR
Ga0207642_105668962	3300025899	Miscanthus Rhizosphere	MTQNFKLTDPKEMGDLNKADICRALYKAVEFHLFGAGSWPADQEALSAFWQMLDDFGLTTVVSDGKPGTIQHAQLGVELNVELMSVFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRRLVRRVYFKFCNPSKL
Ga0207684_107650311	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNKADVCRELYNAAEFHLFGAGSWPADREASGAFWKLLNDFGLTASVPDEPGTTQYTPLGLELHVELMSIFAGAVNLWDIPLLRDLMGHLDDEEADEIYTATSEHAEHVIHRHVLRVYSKFCNRTKRLN
Ga0207684_115474192	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKTTFQHEERDFEMAQNFKLAVPNEIRATAMNKADVCCELYKAAEFHLFGAGLWPADREASAAFWKLLDDFGLTANVPDEPGTTQYTPLGLELNVELMSIFAGAVELWDIPLLLDLMGHLDDEEAEAIYATTSRHPEHVIRRHVLRVY
Ga0207693_110486722	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	TTIKKKADVCRELYNAAEFHLFGAGSWPADREASAAFWKLLNDFGLTTNVPDEPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDDEADAIYTVKSKHPERVIRQHVRQVYFKFCNRSRYLN
Ga0207691_116828411	3300025940	Miscanthus Rhizosphere	ADICRALYHAAEFHLFGAGSWPADREASAAFWQMRDDLELTTVVSDGKPGTIQYTPLGLELNVELMSIFTGAVGLWNIPLLLDLMGHLDDEEAEAIDESISRHPEHVIRRLVRRVYFKFCNQSKFLN
Ga0207712_111461011	3300025961	Switchgrass Rhizosphere	MTQNFKLTDPKEIGDLNKADICRALYNAVEFHLFGAGSWPADQEALSAFWRILDDFGLTTVVSDDGEPGTIYTPLGVELNVELMSVFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRQLVRRVYFKFCNPTKLLN
Ga0207708_118380721	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	DGNFKMTQNFKLTDPKEIGDLNKADICRALYNAVEFHLFGAGSWPADQEALSAFWQMLDDFGLTTVVSDGKPGTIQYTPLGLELNVELMSIFTGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRRLVRRVYFKFCNPSKLLN
Ga0207675_1011690652	3300026118	Switchgrass Rhizosphere	MTQNFKLTDPKEIGDLNKADICRALYNAVEFHLFGAGSWPADQEASSAFWQMLDDFGLTTVVSDGKLGTIQYTPLGVELNVELMSVFAGAAGLWDIPLLLDLMGHLDDEEAETIDASISRHPERVIRQLVSRVYFKFCNRSKLLS
Ga0209647_12761291	3300026319	Grasslands Soil	MNRADVYRELYNAVEFNLFGAGSWPADPEASAAFWKLLDDLGLTTDDPDKPGTPQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLNDEEADAIYTSTSQHPEQVIRRHVLQVYFKFCNRSKRLN
Ga0209131_11404893	3300026320	Grasslands Soil	ADVYRELYNAVEFNLFGAGSWPVDQEASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSQHPEQVIRRHVLRVYFKFCNRSKRLN
Ga0257151_10182502	3300026341	Soil	MNRSDVYRELYNAVEFNLFGAGSWPADQEASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADTIYTSTSQHPEQVIRRHVLQVYFKFCNRSKRLN
Ga0257149_10607832	3300026355	Soil	RSDVYRELYNAVEFNLFGAGSWPADQEASAAFWKLLDDLGLTTDDPDKPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSQHPEQVIRRHVLQVYFKFCNRSKRLN
Ga0257146_10550021	3300026374	Soil	MAQNSKFTEPRETTATAMNRADVYRELYNAVEFNLFGAGSWPADPEASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSQHPEQVIRRHVLQVYFKFCNRSKR
Ga0257154_10237891	3300026467	Soil	GTNFRLTESKENRARAMNKADVCRQLHNAAEFHLFGAGSWPADRESAGAFWKLLDDFGLTANVPDEPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEAEAIYATTSRHPEHVIRRHVLRVYFKFCNRSKRLN
Ga0257172_10865162	3300026482	Soil	MAQNSKFTEPRETRATAMNRADVYRELYNAVEFNLFGAGSWPADREASAAFWKLLDDLGLTTDDPDKPGTTQYTPLGLELNVELMSIFAGAMELWDIPLLLDLMGHLDDEEAETIYATTSRHPEHVIRRHAL
Ga0257153_10832811	3300026490	Soil	MNRSDVYRELYNAVEFNLFGAGSWPADQEASAAFWKLLDDLGLTTDDPDKPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSQHPEQVIRRHV
Ga0257159_10458322	3300026494	Soil	AEKAPLMTTETTAQHEEGNFKMAQNVELAEPKDIRATAMNKADVYRELYNAAEFHLFGAGSWPADREASGAFWKLLNDFGLTASVPDEPGTTRYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGYLDDEEADTIYAAEFRNPEYVIRQHVLRVYFKFCNRSKRLN
Ga0257156_10760351	3300026498	Soil	PPLSMRKKFKMAQNSKFTEPRETRATAMNRSDVYRELYNAVEFNLFGAGSWPADREASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSQHPEQVIRRHVLQVYFKFCNRSKRLN
Ga0257168_11429861	3300026514	Soil	MNKADVYRELYNAAEFHLFGAGSWPADRESSAAFWKLLDDFGLTANVPDEPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADEIYTAPSKHAEHVIHRHVLRVYFKFCNRSKRLN
Ga0179587_102847412	3300026557	Vadose Zone Soil	MNRADVYRELYNAVEFNLFGAGSWPADQEASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSQHPEQVIRRHVLQVYFKFCNRSKRLN
Ga0208575_10202892	3300026920	Soil	NRADVYRELYNAVEFNLFGAGSWPADREASAAFWKLLDDLGLTTDDPDKPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLVLDLMGYLNDKEAAAIYATTSQHPEQVIRRHVLRVYFKFCNRSKRLN
Ga0209488_102346962	3300027903	Vadose Zone Soil	MAQNSKFTEPRETTATAMNRADVYRELYNAVEFNLFGAGSWPADQEASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLLLDLMGHLDDEEADAIYTSTSQHPEQVIRRHVLQVYFKFCNRSKRLN
Ga0307503_109236261	3300028802	Soil	FKMTQNFKLTDPKEISDICRALYNAVEFHLFGAGSWPADQEASSAFWQMLDDFGLTTVVPDDGEPGTIQYTPLGVELNVELMSIFAGAVGLWDIPLLLDLMGHLDDEEAETIDASISRHPEHVIRRLVRRVYFKFCNPSKLLN
Ga0170824_1121918641	3300031231	Forest Soil	MTTETTQNAKLTEPNEIRATAMNKADVCRELYNAAEFHLFGAGSWPADREASGAFWKLLNDYGLTASVSDEPGTTQYTPLGLELNVELMSIFAGAVNLWDIPLLLDLMGYLDDDEADAIYTVKSKHPERVIRQHVRQVYFKFCNRSRYLN
Ga0307471_1019949832	3300032180	Hardwood Forest Soil	MAQNSKFTEPRETGATAMNRSDVYRELYNAVELNLFGAGSWPADQEASAAFWKLLDDLGLTTDDPDKPGTTQYTSLGLELNVELMSIFAGAVNLWDIPLVLDLMGHLDDEEAETIYATTSQHPEQVIRRHVLRVYFKFCNRSNRLN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099688

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences