Metagenome Family F099705

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099705
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	66 residues
Representative Sequence	MSWVSLTTEEQARPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQDEGRALP
Number of Associated Samples	76
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.02 %
% of genes near scaffold ends (potentially truncated)	98.06 %
% of genes from short scaffolds (< 2000 bps)	88.35 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.029 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.039 % of family members)
Environment Ontology (ENVO)	Unclassified (54.369 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.427 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.91% β-sheet: 0.00% Coil/Unstructured: 51.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF13490	zf-HC2	38.83
PF08281	Sigma70_r4_2	16.50
PF03358	FMN_red	3.88
PF06202	GDE_C	2.91
PF02627	CMD	0.97
PF03928	HbpS-like	0.97
PF08592	Anthrone_oxy	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	2.91
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.97
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.07 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	20.39 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.85 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	19.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.85 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	19.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.85 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.85 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.94 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.85 %
Granulicella tundricola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	1.94 %
Unclassified	root	N/A	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005167\|Ga0066672_10363595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300005167\|Ga0066672_10650605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300005181\|Ga0066678_10104062	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300005440\|Ga0070705_100245284	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300005518\|Ga0070699_100894149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	813	Open in IMG/M
3300005518\|Ga0070699_101647495	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005586\|Ga0066691_10739481	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005764\|Ga0066903_106938937	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005764\|Ga0066903_107452713	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300006173\|Ga0070716_101736659	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300006797\|Ga0066659_10519495	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300006806\|Ga0079220_11081664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	647	Open in IMG/M
3300006854\|Ga0075425_103113040	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300009012\|Ga0066710_100154007	All Organisms → cellular organisms → Bacteria	3201	Open in IMG/M
3300010043\|Ga0126380_10599878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300010043\|Ga0126380_11832911	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300010303\|Ga0134082_10017662	All Organisms → cellular organisms → Bacteria	2607	Open in IMG/M
3300010303\|Ga0134082_10363416	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300010339\|Ga0074046_10461236	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300010358\|Ga0126370_10169158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1616	Open in IMG/M
3300010358\|Ga0126370_10503442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1024	Open in IMG/M
3300010358\|Ga0126370_11058444	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300010360\|Ga0126372_11380217	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300010361\|Ga0126378_13366316	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300010366\|Ga0126379_10932000	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300012096\|Ga0137389_11523277	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300012200\|Ga0137382_11323328	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012207\|Ga0137381_10124380	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2205	Open in IMG/M
3300012210\|Ga0137378_11587472	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300012211\|Ga0137377_10169155	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300012351\|Ga0137386_10043119	All Organisms → cellular organisms → Bacteria	3100	Open in IMG/M
3300012359\|Ga0137385_10071649	All Organisms → cellular organisms → Bacteria	3083	Open in IMG/M
3300012361\|Ga0137360_10392826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1168	Open in IMG/M
3300012469\|Ga0150984_113019337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300012971\|Ga0126369_10508626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1263	Open in IMG/M
3300016270\|Ga0182036_10177125	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300016270\|Ga0182036_11409905	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300016270\|Ga0182036_11525623	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300016294\|Ga0182041_10686211	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	907	Open in IMG/M
3300016319\|Ga0182033_10725716	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	871	Open in IMG/M
3300016319\|Ga0182033_11255924	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300016341\|Ga0182035_10904581	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300016357\|Ga0182032_11237649	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300016357\|Ga0182032_11794924	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300016371\|Ga0182034_10009315	All Organisms → cellular organisms → Bacteria	5432	Open in IMG/M
3300016371\|Ga0182034_10746814	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300016404\|Ga0182037_10362067	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1185	Open in IMG/M
3300016422\|Ga0182039_11680705	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300017943\|Ga0187819_10342347	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	865	Open in IMG/M
3300019360\|Ga0187894_10307011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	731	Open in IMG/M
3300021560\|Ga0126371_11193930	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300021560\|Ga0126371_12448662	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300024222\|Ga0247691_1014337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1279	Open in IMG/M
3300026317\|Ga0209154_1165256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M
3300026839\|Ga0207764_116728	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300026868\|Ga0207818_1006912	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300026928\|Ga0207779_1005483	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300026941\|Ga0207741_1003402	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300027045\|Ga0207726_1001678	All Organisms → cellular organisms → Bacteria	4265	Open in IMG/M
3300031573\|Ga0310915_10234710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1289	Open in IMG/M
3300031640\|Ga0318555_10731500	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300031668\|Ga0318542_10761317	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031682\|Ga0318560_10464726	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300031682\|Ga0318560_10766892	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300031736\|Ga0318501_10419135	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300031747\|Ga0318502_10985802	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300031771\|Ga0318546_10225404	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300031771\|Ga0318546_10819593	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	655	Open in IMG/M
3300031795\|Ga0318557_10265316	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300031797\|Ga0318550_10148873	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1124	Open in IMG/M
3300031820\|Ga0307473_10804587	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300031833\|Ga0310917_10433370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	894	Open in IMG/M
3300031833\|Ga0310917_10568211	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300031890\|Ga0306925_11624394	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031896\|Ga0318551_10319243	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300031897\|Ga0318520_10559607	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300031897\|Ga0318520_10570639	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300031910\|Ga0306923_12067031	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300031912\|Ga0306921_10609123	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	1262	Open in IMG/M
3300031941\|Ga0310912_10497398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	950	Open in IMG/M
3300031942\|Ga0310916_10305819	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300031942\|Ga0310916_10710229	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	850	Open in IMG/M
3300031942\|Ga0310916_11565427	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031945\|Ga0310913_10419239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	950	Open in IMG/M
3300031945\|Ga0310913_10745463	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300031946\|Ga0310910_10644064	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300031947\|Ga0310909_10415731	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300031947\|Ga0310909_10853088	All Organisms → cellular organisms → Bacteria → Acidobacteria	750	Open in IMG/M
3300031954\|Ga0306926_10282243	All Organisms → cellular organisms → Bacteria	2056	Open in IMG/M
3300031954\|Ga0306926_10665169	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300031981\|Ga0318531_10463243	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300032001\|Ga0306922_10017932	All Organisms → cellular organisms → Bacteria	7014	Open in IMG/M
3300032001\|Ga0306922_11589122	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300032035\|Ga0310911_10318602	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300032035\|Ga0310911_10358582	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300032041\|Ga0318549_10323519	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300032052\|Ga0318506_10451724	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300032060\|Ga0318505_10273783	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300032076\|Ga0306924_11864883	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300032076\|Ga0306924_12615461	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300032261\|Ga0306920_100233009	All Organisms → cellular organisms → Bacteria	2747	Open in IMG/M
3300032261\|Ga0306920_103412557	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.06%
Host-Associated	Host-Associated	1.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.09%
Plants	Host-Associated → Plants	1.94%
Aquatic	Environmental → Aquatic	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Cave	Environmental → Terrestrial → Cave	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.47%
Loam	Environmental → Terrestrial → Soil → Loam	10.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.97%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.97%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026839	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 52 (SPAdes)	Environmental	Open in IMG/M
3300026868	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 32 (SPAdes)	Environmental	Open in IMG/M
3300026928	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 44 (SPAdes)	Environmental	Open in IMG/M
3300026941	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066672_103635951	3300005167	Soil	MSWIPAVSNDQASPEVKRIYEFLAENWGFVPNYFLALGRDPQLLQDQVNLFTHVMFEQRALPK
Ga0066672_106506052	3300005167	Soil	MSWIPAVSKDQASPEVKRIYDFLGENWGFVPNYFLALGRDPQLLQDQVNLFTHVMFEQRALPK
Ga0066678_101040625	3300005181	Soil	MSWIPAVSKDQASPEVKRIYEFLGENWGFVPNYFLALGRDPQLLQDQVNLFTHVMFEQRVLP
Ga0070705_1002452841	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSWVSSVSAEQASPEVRNVYSFLQEKWGFVPNYFKALGGHPQLLQDQVNMFTHAMFEERALPRAIKEQIA
Ga0070699_1008941493	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSWLPTTPAENVSPESKEIFDFLSKNWGFVPNYFQALGHAPQLLQDQVNLFTHVMFQEGALPKIVKEQIALVVSGINLSN
Ga0070699_1016474951	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSWVSSVSAEQASPEVRNVYNFLQENWGFVPNYFQALGGHPQLLQDQVNMFTHLMFEERALPRAIKEQIALVV
Ga0066691_107394812	3300005586	Soil	MSWVSSVSAEQASPEVRNVYSFLQEKWGFVPNYFKALGGHPQLLQDQVNMFTRAMFEERALPRAIKEQIALVVSGINLSNHCLAAHLEILG
Ga0066903_1069389371	3300005764	Tropical Forest Soil	MSWLPTTPAENVSPETKEIFDFLDKNWGFVPNYFQALGHAPQLLQDQVNLFTHVMFQ
Ga0066903_1074527132	3300005764	Tropical Forest Soil	MSWVRDVSEEQAGPEVKPVYKFLQENWGFVPNYFLALGTQPQFLQDQVNLFTHVMFEEHALPKIIKEQVA
Ga0070716_1017366591	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSWLPTTPAENVSPESKEIFDFLSKNWGFVPNYFQALGHAPQLLQDQVNLFTHVMFQEGALPKIVKEQIALVVSG
Ga0066659_105194952	3300006797	Soil	MSWIPAVSNDQASPEVKRIYEFLAENWGFVPNYFLALGRDPQLLQDQVNLFTHVMFEQRA
Ga0079220_110816641	3300006806	Agricultural Soil	MSWLPTTPGENVSPETRQIYEFLSKNWGFVPNYFQALGHAPQLLQDQVNLFTHVMF
Ga0075425_1031130402	3300006854	Populus Rhizosphere	MSWLPPTPAENAGPETKRIYEFLSTNWGFVPNYFQALGHAPQLLQDQVNLFTHVMFQ
Ga0066710_1001540071	3300009012	Grasslands Soil	MSWVSSVSAEQASPEVRNVYSFLQEKWGFVPNYFRALGGHPQLLQDQVNMFTNAMFEERALPRAIKEQIALVVSG
Ga0126380_105998782	3300010043	Tropical Forest Soil	MSWLPTTPPENVGPESKEIFEFLGKNWGFVPNYFQALGHAPQLLQDQVNLFTHVMFQEGALPKIVKEQIALVV
Ga0126380_118329111	3300010043	Tropical Forest Soil	PEVRPVYKFLRDNWGFVPNYFLALGTQPQFLQDQVNLFTHVMFEEHALPKIVKEQVALVVSAAETGIEG*
Ga0134082_100176621	3300010303	Grasslands Soil	MSWIPAVSNDQASPEVKRIYEFLAENWGFVPNYFLALGRDPQLLQDQVNLFTHVMFEQRALPKQ
Ga0134082_103634161	3300010303	Grasslands Soil	MSWIPAVSKDQASPVVKRIYDFLGENWGFVPNYFLALGRDPQLLQDQVNLFTHVMFEQRALPKQ
Ga0074046_104612362	3300010339	Bog Forest Soil	MSWIALTTEDQAGPEAKQIYKFLSENWGFVPNYFQALGRDPQLLLDQVNMFSHVMFQDEGRALPHIVREQVALVVSGINFSNYCLAA
Ga0126370_101691583	3300010358	Tropical Forest Soil	MSWVPDVSEEQAGPEVKPVYKFLQENWGFVPNYFLALGTQPQFLQDQVNLFTHVMFEEHALPKIVKE
Ga0126370_105034423	3300010358	Tropical Forest Soil	MSWLPTTSPENVSQESKEIFEFLGKNWGFVPNYFQALGHAPQLLQ
Ga0126370_110584443	3300010358	Tropical Forest Soil	MSWVRDVSEEQAGPEVKPVYKFLQENWGFVPNYFLALGTQPQFLQDQVNLFTHVMFEEHALPK
Ga0126372_113802173	3300010360	Tropical Forest Soil	MSWVTLTTEEQAGPETKKVYHFLAENWGFVPNYFQALGGHPQLLQDQVNLFTHVMFQDEGRALPRIVREQVALVVSGINLS
Ga0126378_133663163	3300010361	Tropical Forest Soil	MSWVPAVSEDQAGPAVKPVYKFLQENWGFVPNYFLALGTQPQFLQDQVNLFTHVMFEEHALPKIVKEQV
Ga0126379_109320001	3300010366	Tropical Forest Soil	MPWIASVSQEQASPEVKRIYDYLNKNWGFMPNYFLALRRDSQLLLDQVNLFTNAMFQKRA
Ga0137389_115232772	3300012096	Vadose Zone Soil	MSWVPAVSEEQASPEVKRIYDYLRENWGFVPNYFLALSAQPQFLQDQVNLFTHVMIDE
Ga0137382_113233282	3300012200	Vadose Zone Soil	MSWVSSVSAEQASPEVRNVYSFLQEKWGFVPNYFQALGGHPQLLQNQVNMFTHAMFEERALPRAI
Ga0137381_101243801	3300012207	Vadose Zone Soil	MSWIPAVSKDQASPEVKRIYDFLGENWGFVPNYFLALGRDPQLLQDQVNLFTHVMFEQRALPKQIKEQVAL
Ga0137378_115874721	3300012210	Vadose Zone Soil	MSWIPAVSKDQASPGVKRIYDFLGENWGFVPNYFLALGRDPELLQDQVNLFTHVMFEQRA
Ga0137377_101691554	3300012211	Vadose Zone Soil	MSWIPAVSKDQASPGVKRIYDFLGENWGFVPNYFLALGRDPELLQDQVNLFTHVMFEQRALPKQIKEQVALVVSGINLSN
Ga0137386_100431195	3300012351	Vadose Zone Soil	MSWIPAVSKDQASPEVKRIYDFLGENWGFVPNYFLALGRDPQLLQDQVNLFTHVMFEQRALPKQIK
Ga0137385_100716495	3300012359	Vadose Zone Soil	MSWIPAVSKDQASPEVKRIYDFLGENWGFVPNYFLALGRDPQLLQDQVNLFTHVMFEQRALPKQIKEQVALVVSGINLS
Ga0137360_103928261	3300012361	Vadose Zone Soil	MSWVSSVSAEQASPEVRNVYNFLQENWGFVPNYFQALGGHPQLLQDQVNMFTHLMFEERA
Ga0150984_1130193372	3300012469	Avena Fatua Rhizosphere	MSWLPSTPEENSGPETKQIYDFLSNNWGFVPNYFRALGHKPQLLQDQVNLFTHVMFQQGDLPNIVK*
Ga0126369_105086263	3300012971	Tropical Forest Soil	MSWLPTTPAENITPESKEIFDFLGKNWGFVPNYFQALGHAPQLLQDQVNLFTHVMFQEGALPKIVKE
Ga0182036_101771251	3300016270	Soil	MSWVSLTTEEQAGPETKKVYKFLSENWGFVPNYFQALGGHPQLLQDQVNLFTHV
Ga0182036_114099052	3300016270	Soil	MSWVSLTTEEQAGPETKKVYKFLSENWGFVPNYFQALGGHPQLLQDQV
Ga0182036_115256232	3300016270	Soil	MSWVSLTTEEQARPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVM
Ga0182041_106862111	3300016294	Soil	MAWVPLTTEEQAGAETKQVYKFLAENWGFVPNYFQALGGHPQLLQDQVNLFTHVMSQDEGRAL
Ga0182033_107257163	3300016319	Soil	MSWLPITPPENVSPESKEIFEFLSKNWGFVPNYFQALGHAPQLLQDQVNLF
Ga0182033_112559241	3300016319	Soil	MSWVSLTTEEQAGPETKKVYKFLSENWGFVPNYFQALGGHPQLLQDQVNLFTHVMFQDEGRA
Ga0182035_109045811	3300016341	Soil	MSWVSLTTEEQAAPETKRIYNFLAQSWGFVPNYFQALGAHPQLLQDQVNLFTHVMTQDEGRALPRIVREQVALLVSG
Ga0182032_112376491	3300016357	Soil	MSWVSLTTEEQASPETKQIYKFLGENWGFVPNYFQALGGHPQLLQDQVNLFTHVMIQDEGRALPRI
Ga0182032_117949241	3300016357	Soil	MSWVPDVSEEQAGPEVKPVYQFLQDNWGFVPNYFLALGTQPRFLQDQVNLFTHVMFEEHALPKIVKEQVALVVSGINLSNNCLAARLEILGRMGIEKSMSRKLALNY
Ga0182034_100093157	3300016371	Soil	MSWVSLTTEEQAGPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFT
Ga0182034_107468141	3300016371	Soil	MSWVSLTTEEQAGPETKKVYKFLSENWGFVPNYFQALGGHPQLLQDQVNL
Ga0182037_103620673	3300016404	Soil	MSWVSLTTEEQAAPETKRIYNFLAQSWGFVPNYFQALGAHPQLLQDQVNLFTHVMTQDEGRALPRIVREQVALLVSGINLSNYCLAIHLEILGRLGI
Ga0182039_116807052	3300016422	Soil	MSWVSLTTEEQAGPETKQIYKFLGENWGFVPNYFQALGGHPQLLQDQVNLFTHVMIQDEGRALPRIVREQIALVVS
Ga0187819_103423471	3300017943	Freshwater Sediment	MSWIPLTTEDQAGPEAKQIYKFLSENWGFIPNYFQALGRDPQLL
Ga0187894_103070113	3300019360	Microbial Mat On Rocks	VSWIPPVTKEEASPDVARIYDYLQETWGFVPNYFQALGRNPGLLQDQVTLFSRAIF
Ga0126371_111939302	3300021560	Tropical Forest Soil	MSWVSLTTEEQAGTETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQDESRA
Ga0126371_124486622	3300021560	Tropical Forest Soil	MSWVPDVSEEQAGPEVKPVYKFLQENWGFVPNYFLALGTQPQFLQDQVNLFTHVMFEEHALPKVVKEQVA
Ga0247691_10143371	3300024222	Soil	MSWLPATPENEASPEARQTFDFLNKNWGFVPNYFRALGHKPQWLQDQ
Ga0209154_11652562	3300026317	Soil	MSWIPAVSKDQASPEVKRIYEFLGENWGFVPNYFLALGRDPQLLQDQVNLFTHV
Ga0207764_1167282	3300026839	Tropical Forest Soil	MSWVSLTTEQQAGPETKQIYKFLGENWGFVPNYFQALGGHPQLLQDQVNLFTHVMFQ
Ga0207818_10069121	3300026868	Tropical Forest Soil	MSWVSLTTEQQAGPETKQIYKFLGENWGFVPNYFQALGGHPQLLQDQVNLFTHVMFQDEGRALPRIVR
Ga0207779_10054834	3300026928	Tropical Forest Soil	MSWVSLTTEQQAGPETKQIYKFLGENWGFVPNYFQALGGHPQLLQDQVNLFTHVMFQA
Ga0207741_10034021	3300026941	Tropical Forest Soil	MSWVSLTTEQQAGPETKQIYKFLGENWGFVPNYFQALGGHPQLLQDQVNLFTHVMFQDEGRALPRIV
Ga0207726_10016785	3300027045	Tropical Forest Soil	MSWVSLTTEEQAGSETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMIQNEGRTLPRIVREQLALVVSG
Ga0310915_102347103	3300031573	Soil	MSWVSLTTEEQAGPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQ
Ga0318555_107315001	3300031640	Soil	MSWLPTTPPENVSPESKEIFDFLGKNWGFVPNYFRALGHAPQLLQDQVNLFTHVMFQEGALPKIVKEQIALV
Ga0318542_107613171	3300031668	Soil	MSWVSLTTEEQAGPETKQVYKFLADNWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQDEGRALPRIVREQIALVVSGINLSNYCLA
Ga0318560_104647262	3300031682	Soil	MSWVSLTTEEQAGPETKKIYKFLGENWGFVPNYFQALGAHPQLLEDQVDLFTHVMIQDEG
Ga0318560_107668922	3300031682	Soil	MSWVSLTTEEQAGTETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQNEG
Ga0318501_104191352	3300031736	Soil	MSWVSLTTEEQAGTETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQDEGRALP
Ga0318502_109858022	3300031747	Soil	MSWLSLTTEEQASPETRQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVM
Ga0318546_102254044	3300031771	Soil	MSWVSLTTEEQAGTETKQIYKFLGENWCFVPNYFQALGAHPQLLQDQVNLFTHVMFQDEGRALPRIVRE
Ga0318546_108195931	3300031771	Soil	MSWLPITSPENVSPESKEIFEFLGKNWGFVPNYFQALGHAPQLLQDQV
Ga0318557_102653161	3300031795	Soil	MSWVSLTTEEQAGTETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQDEGRALPRIVREQVAL
Ga0318550_101488731	3300031797	Soil	MSWVSLTTEEQAGPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQDEG
Ga0307473_108045871	3300031820	Hardwood Forest Soil	MSWIPAVSKDQATPEVKRIYEFLGENWGFVPNYFLALGRDPQLLQDQVNLFTHVMFEQRALPKQIKEQVALV
Ga0310917_104333703	3300031833	Soil	MSWVSLTTEEQAGPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFSHVMIPEEGRALPRIVREQIALVVSGINLSNYCLAAHLEILGRL
Ga0310917_105682113	3300031833	Soil	MSWVSLTTEEQARPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQDEGRALPRI
Ga0306925_116243942	3300031890	Soil	MSWVSLTTEEQAAPETKRIYNFLAQSWGFVPNYFQALGAHPQLLQDQVNLFTHVMTQDEGRALPRIVREQVALLVSGINLSNYC
Ga0318551_103192431	3300031896	Soil	MSWVSLTTEEQAGPETKQVYKFLADNWGFVPNYFQALGAHPQLLQDQV
Ga0318520_105596072	3300031897	Soil	MSWVSLTTEEQAGTETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQGEGRA
Ga0318520_105706391	3300031897	Soil	MSWVSLTTEEQAAPETKQIYKFLGENWGFVPNYFQALGGHPQLLQDQVNLFTHVMFQDEGRALPRIVREQVALV
Ga0306923_120670311	3300031910	Soil	MSWVSLTTEEQAGPETKQIYKFLGENWGFIPNYFQALGGHPQLLQDQVNLFTHVMIQDEGRTLPRIVREQIALVVSGINLSNYCLAAHLEILGR
Ga0306921_106091231	3300031912	Soil	MSWVSLTTEEQAGPETKKVYKFLSENWGFVPNYFQALGGHPQLLQDQVNLFTH
Ga0310912_104973983	3300031941	Soil	MSWVSLTTEEQARPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMF
Ga0310916_103058191	3300031942	Soil	MAWVPLTTEEQAGAETKQVYKFLAENWGFVPNYFQALGGHPQLL
Ga0310916_107102293	3300031942	Soil	MSWVSLTTEEQAGPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQDKGRALPRI
Ga0310916_115654271	3300031942	Soil	MSWVSLTTEEQAGPETKKVYKFLSENWGFVPNYFQALGGHPQLLQDQVNLFTHVMFQDEDRAL
Ga0310913_104192391	3300031945	Soil	MSWVSLTTEEQAGPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFSHVMIPEEGRALPRIVREQIALVVSGINLSNYCL
Ga0310913_107454632	3300031945	Soil	MSWVPDVSEEQAGPEVKPVYQFLQDNWGFVPNYFLALGTQPRFLQDQVNLFTHVMFEEHALPKIVKEQVALVVSG
Ga0310910_106440641	3300031946	Soil	MSWVSLTTEEQASPETKQIYKFLGENWGFVPNYFQALGGHPQLLQDQVNLFTHVMIQDEGRALPRIVREQIALVVSGINLSNYCLAA
Ga0310909_104157311	3300031947	Soil	MSWVSLTTEEQAAPETKQIYKFLGENWGFVPNYFQALGGHPQLLQDQVNLFTHVMFQDEGRALPRIVREQVALVVSGINLSN
Ga0310909_108530883	3300031947	Soil	MSWVSLTTEEQAAPETKRIYNFLAQSWGFVPNYFQALGAHPQLLQDQVNLFTHVMTQDEGRALPRIVREQ
Ga0306926_102822431	3300031954	Soil	MSWVSLTTEEQAGPETKKVYKFLSENWGFVPNYFQALGGHPQLLQDQVNLFTHVMFQDEDRALPR
Ga0306926_106651693	3300031954	Soil	MSWVSLTTEEQASPETKQIYKFLGENWGFVPNYFQALGGHPQLLQDQVNLFTHVMFQDEGRALPRIVR
Ga0318531_104632431	3300031981	Soil	MSWIPAVSQEQAGPEVKPTYDFLGQNWGFVPNYFLTLGSHPEWLKDQVNLFTHVMFQETRLPRAVKEQVALVV
Ga0306922_100179321	3300032001	Soil	MSWVSLTTEEQARPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQDEGRALP
Ga0306922_115891222	3300032001	Soil	MSWVPAVLEDQAGPEVKPVYKFLQENWGFVPNYFLALGTQPQFLQDQVNLF
Ga0310911_103186021	3300032035	Soil	MSWVSLTTEEQAAPETKQIYKFLGENWGFVPNYFQALGGHPQLLQDQVNLFTHVM
Ga0310911_103585821	3300032035	Soil	MSWVSLTTEEQAGPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQDKGRALPRIVREQVALVVSGINLSNYCL
Ga0318549_103235191	3300032041	Soil	MSWVSLTTEEQAGTETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMF
Ga0318506_102310271	3300032052	Soil	MSWVSLTTEEQAGTETKQIYKFLGENWGFVPNYFQALGAHPQL
Ga0318506_104517241	3300032052	Soil	MSWVSLTTEEQARPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQDEGRALPRIVREQVALVVSGINLSNY
Ga0318505_102737831	3300032060	Soil	MSWVSLTTEEQAGPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMFQDEGRALPRIVREQVALVVSGINLSN
Ga0306924_118648831	3300032076	Soil	MSWVSLTTEEQAGPETKQIYKFLGENWGFVPNYFQALGAHPQLLQDQVNLFTHVMIQDEGRALPRIVREQIALVVSGIN
Ga0306924_126154611	3300032076	Soil	MSWVSLTTEEQAGPETKKIYKFLGENWGFVPNYFQALGAHPQLLEDQVDLFTHVMIQDEGRTLP
Ga0306920_1002330094	3300032261	Soil	MSWIPAVSQEQAGPEVKPTYDFLGQNWGFVPNYFLTLGSHPEWLKDQVNLFTHVMFQETSLP
Ga0306920_1034125572	3300032261	Soil	MPWVPAVLEDQAGPEVKPVYTFLQENWGFVPNYFLALGTQPQFLQDQVNLFTHVMFEEHALPKIIKEQVAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099705

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences