Metagenome / Metatranscriptome Family F099773

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F099773
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	105 residues
Representative Sequence	MLEATSYGLIALGLILVAAFCFILAEERAAVQANRSSSLVDESKINPLRNAGVVAVNQSGTEPVGREELTGLVLSIQMTSPAQARPRTSDGNSLLRERGPEGVSHG
Number of Associated Samples	76
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.47 %
% of genes near scaffold ends (potentially truncated)	25.24 %
% of genes from short scaffolds (< 2000 bps)	64.08 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil (25.243 % of family members)
Environment Ontology (ENVO)	Unclassified (42.718 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.340 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.87% β-sheet: 0.00% Coil/Unstructured: 73.13%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00902	TatC	50.49
PF04238	DUF420	14.56
PF00175	NAD_binding_1	8.74
PF13473	Cupredoxin_1	5.83
PF09990	DUF2231	2.91
PF00970	FAD_binding_6	1.94
PF08392	FAE1_CUT1_RppA	0.97
PF03840	SecG	0.97
PF16864	Dimerisation2	0.97
PF13490	zf-HC2	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0805	Twin-arginine protein secretion pathway component TatC	Intracellular trafficking, secretion, and vesicular transport [U]	50.49
COG2322	Cytochrome oxidase assembly protein CtaM/YozB, DUF420 family	Posttranslational modification, protein turnover, chaperones [O]	14.56
COG1314	Protein translocase subunit SecG	Intracellular trafficking, secretion, and vesicular transport [U]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	70.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	33.98 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.30 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.98 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	23.30 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	23.30 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101488262	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300001867\|JGI12627J18819_10006904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4377	Open in IMG/M
3300001867\|JGI12627J18819_10037416	All Organisms → cellular organisms → Bacteria	2018	Open in IMG/M
3300003505\|JGIcombinedJ51221_10026323	All Organisms → cellular organisms → Bacteria	2085	Open in IMG/M
3300003505\|JGIcombinedJ51221_10051256	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300005167\|Ga0066672_10040687	All Organisms → cellular organisms → Bacteria → Acidobacteria	2611	Open in IMG/M
3300005177\|Ga0066690_10053500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2470	Open in IMG/M
3300005434\|Ga0070709_11475967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300005435\|Ga0070714_100267838	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1583	Open in IMG/M
3300005435\|Ga0070714_100406559	All Organisms → cellular organisms → Bacteria → Acidobacteria	1288	Open in IMG/M
3300005437\|Ga0070710_10003567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7381	Open in IMG/M
3300005437\|Ga0070710_10715847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300005439\|Ga0070711_100050014	All Organisms → cellular organisms → Bacteria → Acidobacteria	2864	Open in IMG/M
3300005439\|Ga0070711_100182163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1608	Open in IMG/M
3300005454\|Ga0066687_10010149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3602	Open in IMG/M
3300005542\|Ga0070732_10123627	All Organisms → cellular organisms → Bacteria → Acidobacteria	1533	Open in IMG/M
3300005542\|Ga0070732_10247562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300005554\|Ga0066661_10004694	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6278	Open in IMG/M
3300005575\|Ga0066702_10028508	All Organisms → cellular organisms → Bacteria	2828	Open in IMG/M
3300005602\|Ga0070762_10944214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300006162\|Ga0075030_100865789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300006173\|Ga0070716_100001335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10929	Open in IMG/M
3300006173\|Ga0070716_100522351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300006175\|Ga0070712_101310517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300006755\|Ga0079222_10565379	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300006797\|Ga0066659_10013342	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4495	Open in IMG/M
3300006800\|Ga0066660_10045306	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2830	Open in IMG/M
3300006804\|Ga0079221_10441375	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300012202\|Ga0137363_10182172	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300018468\|Ga0066662_10558722	All Organisms → cellular organisms → Bacteria → Acidobacteria	1060	Open in IMG/M
3300020579\|Ga0210407_10264697	All Organisms → cellular organisms → Bacteria → Acidobacteria	1340	Open in IMG/M
3300020579\|Ga0210407_10475250	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300020580\|Ga0210403_10295984	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300020581\|Ga0210399_10834331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300020582\|Ga0210395_10441514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300020582\|Ga0210395_10568108	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300020583\|Ga0210401_10006331	All Organisms → cellular organisms → Bacteria	12044	Open in IMG/M
3300020583\|Ga0210401_10183522	All Organisms → cellular organisms → Bacteria → Acidobacteria	1948	Open in IMG/M
3300020583\|Ga0210401_10187293	All Organisms → cellular organisms → Bacteria → Acidobacteria	1926	Open in IMG/M
3300021088\|Ga0210404_10036905	All Organisms → cellular organisms → Bacteria	2227	Open in IMG/M
3300021171\|Ga0210405_10687594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300021180\|Ga0210396_11171319	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300021403\|Ga0210397_10004791	All Organisms → cellular organisms → Bacteria	8242	Open in IMG/M
3300021404\|Ga0210389_11424246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300021406\|Ga0210386_10199273	All Organisms → cellular organisms → Bacteria	1694	Open in IMG/M
3300021406\|Ga0210386_11429587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300021432\|Ga0210384_10656131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300021474\|Ga0210390_10040298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3818	Open in IMG/M
3300021478\|Ga0210402_11238409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300021559\|Ga0210409_10062267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3483	Open in IMG/M
3300022504\|Ga0242642_1083590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300025898\|Ga0207692_10598574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300025915\|Ga0207693_11094428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300025916\|Ga0207663_10353407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300025928\|Ga0207700_11410860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300025929\|Ga0207664_10125257	All Organisms → cellular organisms → Bacteria → Acidobacteria	2156	Open in IMG/M
3300026309\|Ga0209055_1033203	All Organisms → cellular organisms → Bacteria	2341	Open in IMG/M
3300026317\|Ga0209154_1011555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4310	Open in IMG/M
3300026325\|Ga0209152_10019814	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300026552\|Ga0209577_10003461	All Organisms → cellular organisms → Bacteria	14873	Open in IMG/M
3300027034\|Ga0209730_1003504	All Organisms → cellular organisms → Bacteria → Acidobacteria	1277	Open in IMG/M
3300027061\|Ga0209729_1000480	All Organisms → cellular organisms → Bacteria	2844	Open in IMG/M
3300027071\|Ga0209214_1006628	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300027073\|Ga0208366_1008857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300027074\|Ga0208092_107380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300027266\|Ga0209215_1012364	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300027326\|Ga0209731_1000380	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4049	Open in IMG/M
3300027371\|Ga0209418_1005646	All Organisms → cellular organisms → Bacteria → Acidobacteria	1788	Open in IMG/M
3300027371\|Ga0209418_1103292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300027502\|Ga0209622_1000224	All Organisms → cellular organisms → Bacteria	6979	Open in IMG/M
3300027548\|Ga0209523_1000012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10560	Open in IMG/M
3300027576\|Ga0209003_1000083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5648	Open in IMG/M
3300027842\|Ga0209580_10220014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300027911\|Ga0209698_10061699	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3236	Open in IMG/M
3300029636\|Ga0222749_10059743	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300031231\|Ga0170824_126313652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1348	Open in IMG/M
3300031446\|Ga0170820_13617394	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300031715\|Ga0307476_10290572	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300031715\|Ga0307476_10916669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300031718\|Ga0307474_10103213	All Organisms → cellular organisms → Bacteria	2131	Open in IMG/M
3300031718\|Ga0307474_10660445	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300031718\|Ga0307474_10890997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300031718\|Ga0307474_10936882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300031720\|Ga0307469_10147434	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1755	Open in IMG/M
3300031720\|Ga0307469_11587535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300031740\|Ga0307468_100500380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300031740\|Ga0307468_101591812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300031753\|Ga0307477_10070362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2418	Open in IMG/M
3300031754\|Ga0307475_10072981	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2627	Open in IMG/M
3300031754\|Ga0307475_10444376	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300031820\|Ga0307473_10085474	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300031823\|Ga0307478_10006607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8044	Open in IMG/M
3300031823\|Ga0307478_10036359	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3586	Open in IMG/M
3300031823\|Ga0307478_10343659	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300031823\|Ga0307478_10557302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300031823\|Ga0307478_10783583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300031962\|Ga0307479_10027835	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5375	Open in IMG/M
3300031962\|Ga0307479_10465261	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300032174\|Ga0307470_10019668	All Organisms → cellular organisms → Bacteria	3010	Open in IMG/M
3300032180\|Ga0307471_100016992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5170	Open in IMG/M
3300032180\|Ga0307471_102220779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300032180\|Ga0307471_103898144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300032205\|Ga0307472_100560703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.06%
Aquatic	Environmental → Aquatic	1.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.06%
Sediment	Environmental → Aquatic → Sediment	1.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.99%
Loam	Environmental → Terrestrial → Soil → Loam	31.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%

Habitat	Taxonomy	Distribution
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	25.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	15.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.97%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027074	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF014 (SPAdes)	Environmental	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1014882622	3300000364	Soil	MLEATSYGLIALGVILVAAFCFIWVEERAGLQAYRPSSLVDERNVNLLRTAGALAVNRSRRESVGKPEITGLVLSIQTTSHAQTRSSGSTGNSLLRKPRPEVISNG*
JGI12627J18819_100069045	3300001867	Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAAVQANRSSSLVDESKINPLRNAGVVAVNQSGTEPVGREELTGLVLSIQMTSPAQARPRTSDGNSLLRERGPEGVSHG*
JGI12627J18819_100374164	3300001867	Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREEFTGLVLSVQMTSPAQARPSGFDENSLLRERELEGVSHG*
JGIcombinedJ51221_100263235	3300003505	Forest Soil	MLEATSCGLIALGLILVAAFCFILAEERAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELAGLVLSIQMTSAAQARPRTSDGNSLLRERGPEGVSHG*
JGIcombinedJ51221_100512562	3300003505	Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVALTQSGTEPVGREEFTGLVLSVQMTSPAQARPSGFDENSLLRERGLVGVSHG*
Ga0066672_100406872	3300005167	Soil	MLEATSYGLIALGLILVAAFCFILAEERAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELTGLVLSIQIISPAQVRPRTSDGNSLLRERGPEGVSHG*
Ga0066690_100535002	3300005177	Soil	MLEATSYGLIALGLILVAAFCFILAEKRAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELTGLVLSIQIISPAQVRPRTSDGNSLLRERGPEGVSHG*
Ga0070709_114759671	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREELTGLVLSIQMTSPAQARPSGFDENSLLRERGLVGVSHG*
Ga0070714_1002678381	3300005435	Agricultural Soil	ARMLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREELTGLVLSIQMTSPAQARPNSSDGNSLLRERGLEGVFHG*
Ga0070714_1004065592	3300005435	Agricultural Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSSSLVDESKISPLRNAGTVAVNQSGTEPVGREELTGLVLSIQMTSPAQARRSSSDGNSLLRERGPEGVSHG*
Ga0070710_100035677	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLEATSYGLIALGLILVAAFCLVWAEERAALQAKRSSSLVDESKIKPLRNAGAVAVNRSGIEYVGREEPTELVLSIQMTSPAQPRPSGSDGNSLLRERGPEGVSLG*
Ga0070710_107158471	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVALTQSGTEPVGREELTGLVLSIQMTSPAQARPSSSDGNSLLRERGLEGVFHG*
Ga0070711_1000500144	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREELTGLVLSIQMTSPAQARPNSSDGNSLLRERGLEGVFHG*
Ga0070711_1001821631	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GDARMLEATSYGLIALGLILMAAFCLVWVEERAALQAKRSSSLVDESKMNPLRNAGAVAVNRWGIEYVGREELPELVLSIQMASPAQTRPSGSDRNSLLRERGPDGVPRG*
Ga0066687_100101493	3300005454	Soil	MLEATSYGLIALGLILVAAFCFILTEERAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELTGLVLSIQIISPAQVRPRTSDGNSLLRERGPEGVSHG*
Ga0070732_101236272	3300005542	Surface Soil	MLEAASYGLIALGLILVAAFWFILAEERAALQANRSSSLVDESKINPLRHGGVVAVNQSGTEPVGREELTGLVLSIQMTFPARARPRTSDGNSLLRERGPEGVSHG*
Ga0070732_102475622	3300005542	Surface Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQTNRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREELTGLVLSVQMTSPAQARPSGFDENSLLRERGLVGVSHG*
Ga0066661_100046943	3300005554	Soil	MLEATSYGLIALGLILVAAFCFILTEERAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELTGLVLSIQIISPAQVRPRTSGGNSLLRERGPEGVSHG*
Ga0066702_100285081	3300005575	Soil	MLEATSYGLIALGLILVAAFCFILAEERAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELTGLVLSIQIISPAQVRPRTSDGNSLL
Ga0070762_109442142	3300005602	Soil	MLEATSYGLIALGLILVAAFCCILAEERAALQANRSSSLVDESKINPLGNAGVVAVNQSVTEPVGREELTGLVLSIQMTSPAPARPSGSDGNSLLRERGSEGVSHG*
Ga0075030_1008657892	3300006162	Watersheds	EAASYGLIALGLILVAAFWFILAEERAALQANRSSSLVDESKINPLRHGGVVAVNQSGTEPVGREELTGLVLSIQMTFPAQARPRISDGNSLLRERGPEGVSHG*
Ga0070716_1000013354	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLEATSYGLIALGLILVAAFCLVWAEERAALQAKRSSSLVDESKIKPLRNAGAVAVNRSGIEYVGREEPTELVLSIQMTSPAQPRPSGSDGNSLLRERGPEGVSHG*
Ga0070716_1005223511	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	KNSGQATNRQGANHKRNGDARMLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREELTGLVLSIQMTSPAQARPSGSDENSLLRERGLEGVFHG*
Ga0070712_1013105171	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREEFTGLVLSVQMTSPAQARPSSSDGNSLLRERGPEGVSHG*
Ga0079222_105653792	3300006755	Agricultural Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREELTGLVLSIQMTSPAQARPSSSDGNSLLRERGLEGVFHG*
Ga0066659_100133424	3300006797	Soil	MLEATSYGLIALGLILVAAFCFILAEKRAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELTGLVQSIQIISPAQVRPRTSDGNSLLRERGPEGVSHG*
Ga0066660_100453064	3300006800	Soil	MLEATSYGLIALGLILVAAFCFILAEERAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELTGLVLSIQIISPAQVRPRTSDGNSLLRERGPEGVSHA*
Ga0079221_104413752	3300006804	Agricultural Soil	MLEATSYGLIVLGVILVAAFCFIWVEERAALQAYRSSSLVDESKVNLLRNAGLLENGSRRESVRKQEMTGLVLSIPMTSPAQTHPSGSAENSLRRKPGPEVISNG*
Ga0137363_101821722	3300012202	Vadose Zone Soil	MLEATSYGLIALGLILVAAFCFILAEERAILQAHRRSSLVDERKINPLRNAGVVAVNQSGTEPVGREELTGLVLSIKMTSPAQARRPSGCEGNSLLCERGPEGVSHG*
Ga0066662_105587222	3300018468	Grasslands Soil	MLEATSYGLIALGLILVAAFCFILAEERAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELTGLVQSIQIISPAQVRPRTSDGNSLLRERGPEGVSHG
Ga0210407_102646972	3300020579	Soil	MLEATSYGLIALGLILVAVFCLVWVEERAALQAKRSSSLVDESKMNPLRNAGAVAVNRSGIEYVGREKLTELVLSIQMTSPAQARPSGSDGNGLLGERGSEVGSHG
Ga0210407_104752502	3300020579	Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVALTQSGTEPVGREEFTGLVLSVQMTSPAQARPSGFDENSLLRERGLVGVSHG
Ga0210403_102959843	3300020580	Soil	MLEATSYGLIALGVILVAVFCFIWVEERAALQAYRSSSLVDESKMSPLRNGGAVPVTRPRRESVGGEELTGLVLSFQMTSPAQARPSGSTGNSLLRKPGPEVISNG
Ga0210399_108343312	3300020581	Soil	MLEATSYGLIALGLILVAAFCFILVEERATLQAHSSSSLVDESEMSPLRNAGAVPVTRPQTEPAGREELTGLVLSIQMTCPAQARPNGSNGNSLAVERGSEGVSHG
Ga0210395_104415142	3300020582	Soil	MLEATSYGLIVLGVILVAAFCFIWIEERAVLQAYRSSSLVDESKINLLRNVGPLENRSRRESVGKQGITGLVLSIPMTSPAQGRPSGSTGNSLRRKPGPEVISNG
Ga0210395_105681082	3300020582	Soil	MLEATSYGLIALGVILVAVFCFIWVEERAALQAYRSSSLVDESKMSPLRNGGAVPVTRPRRESVGGEELTGLVLSFQMTSPAQARPSGSTGNSLLRKPGPEVISND
Ga0210401_1000633111	3300020583	Soil	MLEATSYGLIALGLILVAAFCCILAEERAALQANRSSSLVDESKINPLGNAGVVAVNQSGTEPVGREELTGLVLSIQMTSPAPARPSGSDGNSLLRERGSEGVSHG
Ga0210401_101835223	3300020583	Soil	MLELTSYGLIALGLILVAAFCFILAEERSALQANRTSRLVEESEINPLRDAGIVAVNQSGTEPVGREELIGLVLPIAMPSPAQARPLGSDENSLLRERALEGAPHD
Ga0210401_101872934	3300020583	Soil	MLEATSYGLIALVLILVAAFCFIWVEEGAALQANRSSSLVDETKINPLRNAGVVAVTESGTEPVGREELTGLVLSIQMTSPSQTRPSASDGNSPLRERGPEGVFHG
Ga0210404_100369052	3300021088	Soil	MLEATSYGLIALVLILVAAFCFIWVEERAALRANRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREELTGLVLSLQMTSPSQTRPSASDGNSPLRERGPEAVFHG
Ga0210405_106875942	3300021171	Soil	MLEATSYGLIALDLILVAAFCFILAEERAALQANRSSSLVDESKINPLGNAGVVAVNQSGTEPVGREELTGLVLSIQMTSPAPARPSGSDGNSLLRERGSEGVSH
Ga0210396_111713191	3300021180	Soil	MLEATSYGLIALGLILVAAFCCILAEERAALQANRSSSLVDESKINPLGNAGVVAVNQSVTEPVGREELTGLVLSIQMTSPAPARPS
Ga0210397_100047913	3300021403	Soil	MLEATSYGLIALGLILVADFCFILAEERAALQANRSPSLVDETKINPLRNAGVVALTQSGTEPVGREEFTGLVLSVQMTSPAQARPSGFDENSLLRERGLVGVSHG
Ga0210389_114242462	3300021404	Soil	ACEALGQATNRQGSNHKRNGDARMLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVALTQSGTEPVGREEFTGLVLSVQMTSPAQARPSGFDENSLLRERGLVGVSHG
Ga0210386_101992733	3300021406	Soil	MLEATSYGLIALGLILVAAFCCILAEERAALQANRSSSLVDESKINPLGNAGVVAVNQSVTEPVGREELTGLVLSIQMTSPAPARPSGSDGN
Ga0210386_114295872	3300021406	Soil	MLEATSYGLIALVLILVAAFCFIWVEERAALQANRSSSLVDETKINPLRNAGVVAVTESGTEPVGREELTGLVLSIQMTSPSQTRPSASDGNSPLRERGPEGVFHG
Ga0210384_106561311	3300021432	Soil	MLEATSYGLIALVLILVAAFCFIWVEEGAALQANRSSRLVDETKINPLRNAGVVAVTESGTEPVGREELTGLVLSIQMTSPSQTRPSASDGNSPLRERGPEGVFHG
Ga0210390_100402982	3300021474	Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVALTQSGTEPVGREELTGLVLSIQMTSPAPARPSGSDGNSLLREQGSEGVSHA
Ga0210402_112384091	3300021478	Soil	MLEATSYGLIALGLILVAVFCLVWVEERAALQAKRSSSLVDESKMNPLRNAGAVAVNRSGIEYVGREKLTELVLSIQMTSPAQARPSGSDGNGLLGERG
Ga0210409_100622675	3300021559	Soil	MLEATSYGLIALGLILVAAFCCILAEERAALQANRSSSLVDESKINPLGNAGVVAVNQSVTEPVGREELTGLVLSIQMTSPAPARPSGSDGNSLLRERGSEGVSHG
Ga0242642_10835901	3300022504	Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVAVTESGTEPVGREELTGLVLSIQMTSPSQTRPSASDGNSPLRERGPEGVFHG
Ga0207692_105985742	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVALTQSGTEPVGREELTGLVLSIQMTSPAQARPSGFDENSLLRERGLVGVSHG
Ga0207693_110944281	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVALTQSGTEPVGREEFTGLVLSVQMTSPAQARPSGFDENSLLRERG
Ga0207663_103534071	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	NPKEKGDARMLEATSYGLIALGLILVAAFCLVWAEERAALQAKRSSSLVDESKMNPLRNAGAVAVNRWGIEYVGREELPELVLSIQMASPAQTRPSGSDRNSLLRERGPDGVPRG
Ga0207700_114108602	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREELTGLVLSIQMTSPAQARPNSSDGNSLLRERGLEGVFHG
Ga0207664_101252573	3300025929	Agricultural Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREELTGLVLSIQMTSPAQARPNSSDGNSLLRERGLEGVFHG
Ga0209055_10332032	3300026309	Soil	MLEATSYGLIALGLILVAAFCFILAEKRAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELTGLVLSIQIISPAQVRPRTSGGNSLLRERGPEGVSHG
Ga0209154_10115556	3300026317	Soil	MLEATSYGLIALGLILVAAFCFILAEERAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELTGLVLSIQIISPAQVRPRTSDGNSLLRERGPEGVSHG
Ga0209152_100198141	3300026325	Soil	MLEATSYGLIALGLILVAAFCFILAEKRAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELTGLVLSIQIISPAQVRPRTSDGNSLLRERGPEGVSHG
Ga0209577_1000346119	3300026552	Soil	MLEATSYGLIALGLILVAAFCFILAEERAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELTGLVLSIQIISPAQVRPRTSDGNSLLRERGPEGVSHA
Ga0209730_10035042	3300027034	Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSSSLVDESKINPLWNAGVVAVNQSGTEPVGREELTGLVLSIQMTSPAQARPRTSDGNSLLRERGPEGVSHG
Ga0209729_10004803	3300027061	Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSSSLVDESKINPLRNADVVAVNQSGTEPVGREEFTGLARSVHMTSPAQARPSGFDENSLLRERGLEGVFHG
Ga0209214_10066282	3300027071	Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVAVNQSGTEPVGREELTGLVLSIQMTSPAQARPRTSDGNSLLRERGPEGVSHG
Ga0208366_10088572	3300027073	Forest Soil	MLEATSCGLIALGLILVAAFCFILAEERAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELAGLVLSIQMTSAAQARPRTSDGNSLLRERGPEGVFHG
Ga0208092_1073801	3300027074	Forest Soil	MLEATSYGLIALVLILVAAFCFIWVEEGAALQANRSSRLVDETKINPLRNAGVVALTQSGTEPVGREEFTGLVLSVQMTSPAQARPSGFDENSLLRERGLVGVSHG
Ga0209215_10123642	3300027266	Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAAVQANRSSSLVDESKINPLRNAGVVAVNQSGTEPVGREELTGLVLSIQMTSPAQARPRTSDGNSLLRERGPEGVSHG
Ga0209731_10003804	3300027326	Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAAVQANRSSSLVDESKINRLRNAGVVAVNQSGTEPVGREELTGLVLSIQMTSPAQARPRTSDGNSLLRERGPEGVSHG
Ga0209418_10056463	3300027371	Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAAVQANRSSSLVDESKINPLWNAGVVAVNQSGTEPVGREELTGLVLSIQMTSPAQGRPRTSDGNSLLRERGPEGVSHG
Ga0209418_11032921	3300027371	Forest Soil	GLTALGQILVAAFCLVWVDERAALQAKRSSRLVDESKMNPLRNAEALTVNRSEIEYLGREELTELVLSIQMTSPAQARPSGSDGNSPLRERGPEGVSHG
Ga0209622_10002246	3300027502	Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVSVAQSGTEPVGREEFTGLARSVHMTSPAQARPGGFDENSLLRERELEGISHG
Ga0209523_10000123	3300027548	Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREEFTGLVLSVQMTSPAQARPSGFDENSLLREQGLEGVSHG
Ga0209003_10000835	3300027576	Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREEFTGLALSVQMTSPAQARPSGFDENSLLRERELEGISHG
Ga0209580_102200142	3300027842	Surface Soil	DARMLEAASYGLIALGLILVAAFWFILAEERAALQANRSSSLVDESKINPLRHGGVVAVNQSGTEPVGREELTGLVLSIQMTFPARARPRTSDGNSLLRERGPEGVSHG
Ga0209698_100616994	3300027911	Watersheds	MLEAASYGLIALGLILVAAFWFILAEERAALQANRSSSLVDESKINPLRHGGVVAVNQSGTEPVGREELTGLVLSIQMTFPAQARPRISDGNSLLRERGPEGVSHG
Ga0222749_100597433	3300029636	Soil	MLEATSYGLIVLGVILVAAFCFIWIEERAVLQAYRSSSLVDESKINLLRNVGPLENRSRRESVGKQGITGLVLSIPMTSPAHVRPSGSTGNSLRRKPGPEVISNG
Ga0170824_1263136521	3300031231	Forest Soil	LVAAFCFILVEERATLQANSSSSLVDESEMSPLRNAGAVPVTRPRPEPAGREELTGLVLSIQMTYPAQARPNGSNGNSLLREREQEGVFHG
Ga0170820_136173941	3300031446	Forest Soil	GLIALGVILVAAFCFIWVEERAGLQAYRPSSLVDERNVNLLRTAVALAVNRSRRESVGKQENTGLVLSIQMTYPAQARPNGSNGNSLLREREQEGVFHG
Ga0307476_102905722	3300031715	Hardwood Forest Soil	MLEATSYGLTALGVILVAAFCFIWVEEKAALQANRSPRLVGGSKVNPLRNGGVVAVNQSGTKPVGREELTGLVRSIHIISRAQGRLIGCDTNSLLRELGPKGVSHG
Ga0307476_109166691	3300031715	Hardwood Forest Soil	RNGDARMLEATSYGLIALGLILVAAFCFILAEERTALQANCSSSLVDESKINPLRNAGVEAVNQSGTEPVGREELPGLVLSIQMTSPAPARPSGSDGNSLLREQGSEGVSHA
Ga0307474_101032133	3300031718	Hardwood Forest Soil	MLEATSYGLIALDLILVAAFCFILAEERAALQANRSSSLVDESKINPLRNAGVVAVNQSETEPVGREELPGLVLSIQMTSLAPARPSGSDGNSLLREQGSEGVSHA
Ga0307474_106604452	3300031718	Hardwood Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERATLPANRSSSLVDESKINPLRNAGVVAVNQSGTEPVGREELTGLVQSIQMTAPAQARPSGSDGNSLLLERGPEGLSHG
Ga0307474_108909972	3300031718	Hardwood Forest Soil	MLEATSYGLIALGVILVAAFCFILAEERSALQANRSSSLVDESEINPLRNAGVDAVNQSGTEPVGREELTGLVLSIPMLSPARSRPSGSDENSLLRERALKGASHG
Ga0307474_109368822	3300031718	Hardwood Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSLSLVDETKINPLRNAGVVAVTQSGTEPVGREELTGLVLSIQMTSPAQARPSSSDGNSLLRERGLEGVFHG
Ga0307469_101474343	3300031720	Hardwood Forest Soil	MLEATSYGLIALGVILVAAFCFIWIEERAALQAYRSSSLVDERKVNLLPHAGRLAVNRSRRESVGKQEITGLVLSIQMTSPAQPRPSGSAGLSLLGKLGPEVISNG
Ga0307469_115875351	3300031720	Hardwood Forest Soil	FCFILAEERATLQASRSSSLIDESKINPLRNTGAVAVNQSGTKSVGREELTRLVLSIQMKTPAQARRPSGSDGNSLLRERGPEGVSHG
Ga0307468_1005003802	3300031740	Hardwood Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERATLQAYRSSSLVDESKVNLLRNAGPLAENRSRRESVGKQEITGLVLSIQMTSPAQTRPSGSAGLSLLRKPGPEVI
Ga0307468_1015918122	3300031740	Hardwood Forest Soil	MLEATSYGLIALGLILMAAFCLVWVEERAALQAKRSSSLVDESKMNPLRNAGAVAVNRSGIEYVGREKLTALVLSIQMTSPAQARPSGSDGNGLLRERGSEVDSHG
Ga0307477_100703626	3300031753	Hardwood Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERTALQANCSSSLVDESKINPLRNAGVVAVNQSGTEPVGREELTGLALSIQMTCPAQARPCGSDENSLLSERVLEGVSHG
Ga0307475_100729811	3300031754	Hardwood Forest Soil	LILAEERDTLQTNRSSSLIDESKINPLRNAGVVAVNQSGTEPVGREELTGLALSIQMTCPAQARPCGSDENSLLSERVLEGVSHG
Ga0307475_104443762	3300031754	Hardwood Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERTALQANCSSSLVDESKINPLRNAGVEAVNQSGTEPVGREELPGLVLSIQMTSPAPARPSGSDGNSLLREQGSEGVSHA
Ga0307473_100854742	3300031820	Hardwood Forest Soil	MLEATSYGLITLGVILVAAFCFIWVEERAALQAYRSSSLVDERKVNLLPHAGRLAVNRSRRESVGKQEITGLVLSIQMTSPAQTRSSGSAGNSLLRKPGPEVISNG
Ga0307478_100066072	3300031823	Hardwood Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERAALQANRSSSLVDESKINPLRNAGVVAVNQSGTEPVGREELPGLVLSIQVTSPAPARPSGSDGNSLLREQGSEGVSHA
Ga0307478_100363594	3300031823	Hardwood Forest Soil	MLEATSYGLIALVLILVAAFCFIWVEERAALRANRSPSLVDETKINPLRNAGVVAVTQSGTEPVGREELTGLVLSIQMTSPSQTRPSASDGNSPLRERGPEGVFHG
Ga0307478_103436591	3300031823	Hardwood Forest Soil	MLEATSYGLTALGVILVAAFCFIWVEEKAALQANRSPRLVGGSKVNPLRNGGVVAVNQSGTKPVGREELTGLVRSIHIISRAQGRL
Ga0307478_105573022	3300031823	Hardwood Forest Soil	MLEATSYGLIFLGVILVAAFCFIWIEERAALQAYRSSSLVDESKVNLLRNVGPLENRSRRESVGKQEITGLVLSIPMTSPAQARPSGSTRNSLRRKPGPEVISNG
Ga0307478_107835831	3300031823	Hardwood Forest Soil	ARMLEATSYGLTALGVILVAAFCFIWVEEKAALQANRSPRVVEGSKVNPLRNGGVVAVNQSGTEPVGREELTGLVRSIHIISPAQARLIGCDTNSLLRELGPKGVSHG
Ga0307479_100278353	3300031962	Hardwood Forest Soil	MLEATSYGLITLGLILVIAFCFIWVEEGAARQANRSSSLVDESKVNPLRNAGAVAVNRSGTESVGRQELTGSVLSIQMISPARARLVGSDGNNLLRERGPEGGAHG
Ga0307479_104652613	3300031962	Hardwood Forest Soil	MLEATSYGLIALGLILVAAFCLILAEDRDTLQTNRSSSLVDESKINPLRNAGVVAVNQSGTEPVGREELTGLALSIQMTCPAQARPCGSDENSL
Ga0307470_100196682	3300032174	Hardwood Forest Soil	MLEATSYGLIALGLILVAAFCFILAEERATLQANCSSGLVDESKINPLRNAGVVAVNQSGTEPVGREELTGLVQSIQMTAPAQARPSGSDGNSLLLERGPEGLSHG
Ga0307471_1000169923	3300032180	Hardwood Forest Soil	MLEATSYGLIILGVILVAAFCFIWVEERAALQAYRSSSLVDERKVNLLPHAGRLAVNRSRRESVGKQEITGLVLSIQMTSPAQPRPSGSAGLSLLGKLGPEVISNG
Ga0307471_1022207792	3300032180	Hardwood Forest Soil	MLEATSYGLIALGLILVAAFCLVWAEERAALQAKRSSSLVDESKMKPLRNAGAVAVNRSGIEYVGREEPTELVLSIQMTSPAQPRPSGSDGNSLLRERGPEGVSHG
Ga0307471_1038981442	3300032180	Hardwood Forest Soil	MLEATSYGLIALGLILVAAFCLVWAEERAALQAKRSSSLVDESKVNPLQNAGAVAVNRSGIDYVGREELTELVLSIQMTSPAQARRSGSDGNSLLRERGPEGVPH
Ga0307472_1005607032	3300032205	Hardwood Forest Soil	MLEVTSYGLIALGLILVAAFCLILAEGRVTLQANRSSSLVDNSEINPLRNAGVVAVNQLGTEPIGREELTGLVLSIQMPSPGQARPSGSDENSLLRERGLDGASNG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099773

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences