Metagenome / Metatranscriptome Family F099789

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099789
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	86 residues
Representative Sequence	MLRLAGALEQGNLVEVTIETASGAVKGMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Number of Associated Samples	77
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.60 %
% of genes near scaffold ends (potentially truncated)	55.34 %
% of genes from short scaffolds (< 2000 bps)	69.90 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.117 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.184 % of family members)
Environment Ontology (ENVO)	Unclassified (27.184 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.786 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.59% β-sheet: 22.35% Coil/Unstructured: 67.06%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF02367	TsaE	46.60
PF13561	adh_short_C2	9.71
PF03853	YjeF_N	2.91
PF14559	TPR_19	2.91
PF05977	MFS_3	2.91
PF00472	RF-1	1.94
PF01256	Carb_kinase	1.94
PF13414	TPR_11	0.97
PF00027	cNMP_binding	0.97
PF07690	MFS_1	0.97
PF03544	TonB_C	0.97
PF01321	Creatinase_N	0.97
PF13620	CarboxypepD_reg	0.97
PF02954	HTH_8	0.97
PF00012	HSP70	0.97
PF13147	Obsolete Pfam Family	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0802	tRNA A37 threonylcarbamoyladenosine biosynthesis protein TsaE	Translation, ribosomal structure and biogenesis [J]	46.60
COG0062	NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain	Nucleotide transport and metabolism [F]	2.91
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	2.91
COG0063	NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate dehydratase domain	Nucleotide transport and metabolism [F]	1.94
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	1.94
COG0351	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	Coenzyme transport and metabolism [H]	1.94
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	1.94
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	0.97
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.12 %
Unclassified	root	N/A	3.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.12 %
Unclassified	root	N/A	3.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.12 %
Unclassified	root	N/A	3.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	55.34 %
Unclassified	root	N/A	3.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	31.07 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18.45 %
Unclassified	root	N/A	3.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.07 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	18.45 %
Unclassified	root	N/A	3.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.07 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.45 %
Unclassified	root	N/A	3.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.07 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5.83 %
Unclassified	root	N/A	3.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.07 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.88 %
Unclassified	root	N/A	3.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10057992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2018	Open in IMG/M
3300001082\|JGI12664J13189_1001535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2791	Open in IMG/M
3300001154\|JGI12636J13339_1002686	All Organisms → cellular organisms → Bacteria	2970	Open in IMG/M
3300002245\|JGIcombinedJ26739_100318078	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300002245\|JGIcombinedJ26739_100878529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300003505\|JGIcombinedJ51221_10034240	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1866	Open in IMG/M
3300004080\|Ga0062385_10003361	All Organisms → cellular organisms → Bacteria	4678	Open in IMG/M
3300004080\|Ga0062385_10043663	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1892	Open in IMG/M
3300004152\|Ga0062386_100798093	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300004635\|Ga0062388_100829164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300004973\|Ga0072322_1271756	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005537\|Ga0070730_10336061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300005541\|Ga0070733_10002265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	13869	Open in IMG/M
3300005541\|Ga0070733_10034397	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3162	Open in IMG/M
3300005591\|Ga0070761_10584236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300005602\|Ga0070762_10536537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300005610\|Ga0070763_10003290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5981	Open in IMG/M
3300005921\|Ga0070766_10027199	All Organisms → cellular organisms → Bacteria	3084	Open in IMG/M
3300006059\|Ga0075017_100369400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300006172\|Ga0075018_10612741	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300006173\|Ga0070716_100919432	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300006354\|Ga0075021_10065174	All Organisms → cellular organisms → Bacteria	2124	Open in IMG/M
3300009683\|Ga0116224_10266372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300009698\|Ga0116216_10417710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300009700\|Ga0116217_10185000	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1376	Open in IMG/M
3300010339\|Ga0074046_10914970	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300010343\|Ga0074044_10833918	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300010379\|Ga0136449_102168867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300010379\|Ga0136449_102724495	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300010379\|Ga0136449_103669564	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300014165\|Ga0181523_10467131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300014657\|Ga0181522_10262414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022	Open in IMG/M
3300017822\|Ga0187802_10168019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300017933\|Ga0187801_10046451	All Organisms → cellular organisms → Bacteria → Acidobacteria	1568	Open in IMG/M
3300017943\|Ga0187819_10068058	All Organisms → cellular organisms → Bacteria → Acidobacteria	2118	Open in IMG/M
3300017946\|Ga0187879_10156710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1286	Open in IMG/M
3300017948\|Ga0187847_10045090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2546	Open in IMG/M
3300017955\|Ga0187817_10086370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1964	Open in IMG/M
3300017995\|Ga0187816_10251757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300018025\|Ga0187885_10374185	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300018026\|Ga0187857_10568145	Not Available	506	Open in IMG/M
3300018047\|Ga0187859_10852075	Not Available	525	Open in IMG/M
3300020580\|Ga0210403_10001354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	23392	Open in IMG/M
3300020580\|Ga0210403_10290058	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300020581\|Ga0210399_10050147	All Organisms → cellular organisms → Bacteria	3354	Open in IMG/M
3300020581\|Ga0210399_10515470	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300020582\|Ga0210395_10035799	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3640	Open in IMG/M
3300020582\|Ga0210395_10072914	All Organisms → cellular organisms → Bacteria	2526	Open in IMG/M
3300020582\|Ga0210395_10564478	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300020583\|Ga0210401_10122266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2441	Open in IMG/M
3300021088\|Ga0210404_10238051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300021168\|Ga0210406_10544434	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300021170\|Ga0210400_10942725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300021171\|Ga0210405_10037800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3847	Open in IMG/M
3300021180\|Ga0210396_10000209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	91792	Open in IMG/M
3300021181\|Ga0210388_11329889	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300021181\|Ga0210388_11772999	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300021402\|Ga0210385_11148971	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300021402\|Ga0210385_11515969	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300021403\|Ga0210397_10106620	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300021403\|Ga0210397_10807175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300021403\|Ga0210397_10894511	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300021420\|Ga0210394_10044406	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3904	Open in IMG/M
3300021420\|Ga0210394_10046984	All Organisms → cellular organisms → Bacteria	3785	Open in IMG/M
3300021433\|Ga0210391_10085456	All Organisms → cellular organisms → Bacteria → Acidobacteria	2490	Open in IMG/M
3300021433\|Ga0210391_10815136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300021474\|Ga0210390_10819388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300021474\|Ga0210390_10930682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300021474\|Ga0210390_11025608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300021478\|Ga0210402_10104492	All Organisms → cellular organisms → Bacteria	2548	Open in IMG/M
3300027370\|Ga0209010_1000001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	318654	Open in IMG/M
3300027565\|Ga0209219_1149015	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300027567\|Ga0209115_1004065	All Organisms → cellular organisms → Bacteria	2884	Open in IMG/M
3300027641\|Ga0208827_1210049	Not Available	514	Open in IMG/M
3300027684\|Ga0209626_1177456	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300027729\|Ga0209248_10005217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4118	Open in IMG/M
3300027768\|Ga0209772_10199693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300027824\|Ga0209040_10079935	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300027854\|Ga0209517_10308120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300027855\|Ga0209693_10056600	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300027867\|Ga0209167_10001574	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	13241	Open in IMG/M
3300027867\|Ga0209167_10080783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1639	Open in IMG/M
3300027867\|Ga0209167_10192193	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300027889\|Ga0209380_10015849	All Organisms → cellular organisms → Bacteria → Acidobacteria	4294	Open in IMG/M
3300027894\|Ga0209068_10041739	All Organisms → cellular organisms → Bacteria	2307	Open in IMG/M
3300027905\|Ga0209415_10071501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4114	Open in IMG/M
3300027905\|Ga0209415_11129172	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300030760\|Ga0265762_1131974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300030862\|Ga0265753_1044154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300031090\|Ga0265760_10040281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1391	Open in IMG/M
3300031090\|Ga0265760_10163670	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300031231\|Ga0170824_101894420	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300031446\|Ga0170820_12037879	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300031446\|Ga0170820_16671431	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300031708\|Ga0310686_103044391	Not Available	506	Open in IMG/M
3300031708\|Ga0310686_107781263	All Organisms → cellular organisms → Bacteria → Acidobacteria	1321	Open in IMG/M
3300031708\|Ga0310686_108001199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1537	Open in IMG/M
3300031708\|Ga0310686_108977094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300031708\|Ga0310686_111410155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300031823\|Ga0307478_10078433	All Organisms → cellular organisms → Bacteria	2515	Open in IMG/M
3300031962\|Ga0307479_10149754	All Organisms → cellular organisms → Bacteria → Acidobacteria	2289	Open in IMG/M
3300032160\|Ga0311301_11889937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300032180\|Ga0307471_102991544	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.67%
Aquatic	Environmental → Aquatic	22.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.67%
Freshwater	Environmental → Aquatic → Freshwater	18.45%
Sediment	Environmental → Aquatic → Sediment	3.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.45%
Loam	Environmental → Terrestrial → Soil → Loam	15.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.59%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.18%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.74%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.94%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001082	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3	Environmental	Open in IMG/M
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004973	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 19 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100579922	3300000567	Peatlands Soil	MLRLAGALEQGNLIEVAFEMESGAVRGMAEILEPTRKSKDGILQPFRFIALEDDDHRALHNALDSRVDKDFLGLRSSQWVAPKRQ*
JGI12664J13189_10015352	3300001082	Forest Soil	MLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKSKDEIMQPFRFIALEDDDQRTLRSALDSRVDKDFLGLRSSQWVAPKRK*
JGI12636J13339_10026864	3300001154	Forest Soil	MLRLAGALEQGNLVEVTIETESGAVKGMAEILEPTRKSKDGILQPFRFIALEDNDHRTLRNALDTRVDRDFLGLRSSKWVAPKR*
JGIcombinedJ26739_1003180783	3300002245	Forest Soil	MLRVAGALEQGNLVEVTIETESGAVKAMAEILQATRKSKDGILQPFRFVALEDNDHRTLRNALDSRVDKDFLGLRSTQWVAPKRQ*
JGIcombinedJ26739_1008785292	3300002245	Forest Soil	MLRLAGALEQGNLVEVTIETQSGAVKGMAEILQPTRKFKDGILQPFRFIALGDNDHRTLRNALDSRVDKDFLGLRSTQWVAPKRQ*
JGIcombinedJ51221_100342402	3300003505	Forest Soil	MLRLAGALEQGNLVEVTIETASGAVKGMAEILEPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPRRT*
Ga0062385_100033614	3300004080	Bog Forest Soil	MLRLAGALEQGNLVEVAIQTESGAVKGMAEILQPTRKSKTEIMQPFRFIALEDDDQRVLRNVLDSRVDQDFLGLRSSQWVPPK
Ga0062385_100436633	3300004080	Bog Forest Soil	MLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDNDHLTLRNALDTRVDKDFVGLRSAQWVAPKRK*
Ga0062386_1007980931	3300004152	Bog Forest Soil	MLRLAGALEQGNLIEVAFETESGAVKGMAEILQPTRKSTNETLQPFRFIALEDDDQRNLRNVLDSRMDQDFLGLRSSQWVAPKRK*
Ga0062388_1008291642	3300004635	Bog Forest Soil	NLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDNDHLTLRNALDTRVDKDFVGLRSAQWVAPKRK*
Ga0072322_12717561	3300004973	Peatlands Soil	MLRLAGALEQGNLIEVAFEMESGAVRGMAEILEPTRKSKDGILQPFRFIALEDDDHRALHNALDSRVDKDFL
Ga0070730_103360611	3300005537	Surface Soil	GNLVEVTIETASGKVKGMVEILQATHKSRDGILQPFRFVALEDNDHRTLRNALDSRVDRDFLGLRSPQWVAPKR*
Ga0070733_100022659	3300005541	Surface Soil	MLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKTKDEIMQPFRFIALEDDDQRTLRSALDSRVDQDFLGLRSSQWVAPKRK*
Ga0070733_100343973	3300005541	Surface Soil	MLRLAGALEQGNLVEVTIETAAGAVKAMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT*
Ga0070761_105842362	3300005591	Soil	GRSARAKLQSISETGGMLRLAGALEQGNVVEVAFQTESGAVKGMAEILPPTHKSKAGKPAEILQPFRFIALEDEDQRALRSALDSRTDQDFLGLRSSQWVPPKR*
Ga0070762_105365372	3300005602	Soil	GRSARAKLQTISETGGMLRLAGALEQGNLVEVTIETASGAVKAMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFMGLRSSQWVAPKRR*
Ga0070763_100032901	3300005610	Soil	ALEQGNLVEVTIETASGAVKGMAEILEPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT*
Ga0070766_100271995	3300005921	Soil	MLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDNDQLTLRSALDSRVDQDFLGLRSSQWVAPKRK*
Ga0075017_1003694001	3300006059	Watersheds	MLRLAGALEQGNLVEVTIETEAGAVKGMAEILEPTRKSRDGILQPFRFIALEDNDHRTLRNALDTRVDRDFLGLRSSQWVAPKR*
Ga0075018_106127412	3300006172	Watersheds	GALEQGNLVEVTIETESGAVKGMAEILQATHKSRDGILQPFRFVALEDNDHRTLRNALDSRVDRDFLGLRSPQWVAPKR*
Ga0070716_1009194321	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLRLAGALEQGNLVEVAIQTESGTVKAMAEILQATRKSSDGILQPFRFIALEDSDHRTLRNALDTRVDRDFLGLRSPQWVPPKR*
Ga0075021_100651742	3300006354	Watersheds	MLRLAGALEQGNLVEVTIETEAGAVKGMAEILSPTRKSNDGILQPFRFIALEDDDHRTLRNALDSRVDRDFLGLRSSQWVAPKRQ*
Ga0116224_102663722	3300009683	Peatlands Soil	GALEQGNLIEVAFEMESGAVRGMAEILEPTRKSKDGILQPFRFIALEDDDHRALHNALDSRVDKDFLGLRSSQWVAPKRT*
Ga0116216_104177101	3300009698	Peatlands Soil	MLRLAGALEQGNLVEVTIQTESGAVKGMAEILQPTRKSKDGILQPFRFIALEDDDHRTLRDALDSRVDKDFLGLRSSQWVAPKRQ*
Ga0116217_101850001	3300009700	Peatlands Soil	TIETESGAVKGMAEILQPTRKSKDGILQPFRFIALEDDDHRTLRDALDSRVDKDFLGLRSSQWVAPKRQ*
Ga0074046_109149701	3300010339	Bog Forest Soil	DGRSARAKLQTISETGGMLRLARALEQGNLIEVAFETESGAVKGMAEILEPTRKSNDRVPDGVLQPFRFIALEDDDQRNLRSVLDSRMDRDFLGLRSSQWVAPKRK*
Ga0074044_108339182	3300010343	Bog Forest Soil	ARAKLQTISETGGMLRLARALEQGNLIEVAFETESGAVKGMAEILEPTRKSNDRVPDGVLQPFRFIALEDDDQRTLRSVLDSRMDRDFLGLRSSQWVAPKRK*
Ga0136449_1021688672	3300010379	Peatlands Soil	GRSARAKLQTVSETGGMLRLAGALEQGNLVEVTIETESGAVKGMAEILQPTRKSKDGILQPFRFIALEDDDHRTLRDALDSRVDKDFLGLRSSQWVAPKRQ*
Ga0136449_1027244951	3300010379	Peatlands Soil	MLRLAGALEQGNLVEVTIETASGAVKGMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT*
Ga0136449_1036695641	3300010379	Peatlands Soil	GRSARAKLQTVSETGGMLRLAGALEQGNLVEVTIETESGAVKGMAEILEPTRKSKDGILQPFRFIALEDNDHRTLRDALDSRVDKDFLGLRSSQWVAPKRQ*
Ga0181523_104671311	3300014165	Bog	NLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDADQLTLRSALDSRVDQDFLGLRSSQWVAPKRK*
Ga0181522_102624141	3300014657	Bog	DGRSARAKLQSISETGGMLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDADQLTLRSALDSRVDQDFLGLRSSQWVAPKRK*
Ga0187802_101680191	3300017822	Freshwater Sediment	DGRSARAKLQTISETGGMLRLAGALEQGNLVEVTIETASGAVKGMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSAQWVAPKRT
Ga0187801_100464512	3300017933	Freshwater Sediment	MLRLAGALEQGNLVEVTIETESGAVKGMAEILEPTRKSKDGILQPFRFIALEDDDHRTLRDALDSRVDKDFLGLRSSQWVAPKRQ
Ga0187819_100680582	3300017943	Freshwater Sediment	FVEVAFKTESGSVQGMAEMLRPAKTARDGILQPFRFIALEDDDHRALRNAVDSRVDMDFLGLRSSQWRPPKQH
Ga0187879_101567102	3300017946	Peatland	MLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDADQLTLRSALDSRVDQDFLGLRSSQWVAPKRK
Ga0187847_100450901	3300017948	Peatland	EQGNLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDADQLTLRSALDSRVDQDFLGLRSSQWVAPKRK
Ga0187817_100863703	3300017955	Freshwater Sediment	QTVSETGGMLRLAGALEQGNLVEVTIETESGAVKGMAEILEPTRKSKDGILQPFRFIALEDDDHRTLRDALDSRVDKDFLGLRSSQWVAPKRQ
Ga0187816_102517571	3300017995	Freshwater Sediment	RAKLQTVSETGGMLRLAGALEQGNLVEVTIETESGAVKGMAEILEPTRKSKDGILQPFRFIALEDNDHRTLRDALDSRVDKDFLGLRSSQWVAPKRQ
Ga0187885_103741851	3300018025	Peatland	MLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDNDHLTLRNALDTRVDKDFVGLRSAQWVAPKRK
Ga0187857_105681451	3300018026	Peatland	QSISETGGMLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDADQLTLRSALDSRVDQDFLGLRSSQWVAPKRK
Ga0187859_108520751	3300018047	Peatland	ETGGMLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDNDHLTLRNALDTRVDKDFVGLRSAQWVAPKRK
Ga0210403_100013547	3300020580	Soil	MLRLAGALEQGNLVEVTIETESGSVKGMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0210403_102900582	3300020580	Soil	MLRLAGALEQGNLVEVVFETASGAVKGMAEILEPTRKSTTETLQPFRFIALEDDDHRTLRDALDSRVDKDFMGLRSSQWVAPKRK
Ga0210399_100501474	3300020581	Soil	MLRLAGALEQGNLVEVTIETESGAVKGMAEILEPTLKSKDGIMQPFRFIALEDTDHLTLRNALDSRVDKDFLGLRSPQWVAPKRS
Ga0210399_105154701	3300020581	Soil	EVVFETASGAVKGMAEILEPTRKSTTETLQPFRFIALEDDDHRTLRDALDSRVDKDFMGLRSSQWVAPKRK
Ga0210395_100357993	3300020582	Soil	MLRLAGALEQGNLVEVTIETASGAVKGMAEILEPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPRRT
Ga0210395_100729144	3300020582	Soil	MLRLAGALEQGNLVEVTIETASGNVKAMAEILQPTRNSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0210395_105644782	3300020582	Soil	GNLVEVVFETASGAVKGMAEILEPTRKSTTETLQPFRFIALEDDDHRTLRDALDSRVDKDFMGLRSSQWVAPKRK
Ga0210401_101222661	3300020583	Soil	MLRLAGALEQGNLVEVTIETAAGAVKAMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0210404_102380512	3300021088	Soil	MLRLAGALEQGNLVEVTIETAAGAVKAMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPRRT
Ga0210406_105444342	3300021168	Soil	MLRLAGALEQGNLVEVTIETASGAVKAMAEILQPTRKSKDGILQPFRFIALEDNDHLTLRNALDTRVDKDFLGLRSPQWVAPKRK
Ga0210400_109427251	3300021170	Soil	LQTISETGGMLRVAGALEQGNLVEVTIETESGAVKAMAEILQATRKSKDGILQPFRFVALEDNDHRTLRNALDSRVDKDFLGLRSTQWVAPKRQ
Ga0210405_100378001	3300021171	Soil	MLRLAGALEQGNLVEVTIETASGAVKAMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWIAPKRT
Ga0210396_1000020920	3300021180	Soil	MLRLAGALEQGNLVEVTIETAAGSVKAMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0210388_113298891	3300021181	Soil	SARAKLQSISETGGMLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKSKNEIMQPFRFIALEDNDHLTLRNALDTRVDKDFVGLRSAQWVAPKRK
Ga0210388_117729991	3300021181	Soil	NLVEVAFETESGAVKGMAEILEPTRKSKNGTPDGTLQPFRFIALEDDDQRTLRSVLDSRVDQDFLGLRSSQWVAPKRK
Ga0210385_111489711	3300021402	Soil	LAGALEQGNLVEVTIETASGAVKAMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0210385_115159692	3300021402	Soil	KLQTISETGGMLRLAGALEQGNLVEVTIETESGAVKAMAEILQPTRKSKDGTLQPFRFIALEDNDHQTLRDALDSRVDKDFLGLRSSQWVAPKRRG
Ga0210397_101066203	3300021403	Soil	MLRLAGALEQGNLVEVTIETASGAVKAMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0210397_108071751	3300021403	Soil	LRVARALEQGNLVEVDIQTEAGAVQGMAEMLSPSRAVTDGILQPFRFVALEDEAHRALRSVMDARLDPDFVGLRSSQWVPPKRQ
Ga0210397_108945112	3300021403	Soil	SARAKLQTVSETGGMLRLAGALEQGNLVEVVFETASGAVKGMAEILEPTRKSTTETLQPFRFIALEDDDHRTLRDALDSRVDKDFMGLRSSQWVAPKRK
Ga0210394_100444064	3300021420	Soil	MLRLAGALEQGNLVEVAFETESGAVKGMAEILEPTRKSKNGTSDGTLQPFRFIALEDDDQRTLRSVLDSRVDQDFLGLRSSQWVAPKRK
Ga0210394_100469843	3300021420	Soil	MLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKSKNEIMQPFRFIALEDNDHLTLRNALDTRVDKDFVGLRSAQWVAPKRK
Ga0210391_100854561	3300021433	Soil	MLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKSKNEIMQPFRFIALEDNDHLTLRNALDTRVDKDFVGLRSAQWVA
Ga0210391_108151362	3300021433	Soil	SETGGMLRLAGALEQGNLVEVTIETASGNVKAMAEILQPTRNSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0210390_108193882	3300021474	Soil	EQGNLVEVTIETASGAVKAMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWIAPKRT
Ga0210390_109306821	3300021474	Soil	LAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKSKNEIMQPFRFIALEDNDHLTLRNALDTRVDKDFVGLRSAQWVAPKRK
Ga0210390_110256081	3300021474	Soil	VEVAFQTESGAVKGMAEILPPTHKSKAGKPAEILQPFRFIALEDEDQRALRSALDSRTDQDFLGLRSSQWVPPKR
Ga0210402_101044923	3300021478	Soil	MLRLAGALEQGNLVEVTIETAAGAVKGMAEILQPTHKFKDGILQPFRFIALEDDDHRTLRNALDSRVDKDFLGLRSSQWVAPKRS
Ga0209010_1000001128	3300027370	Forest Soil	MLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKSKDEIMQPFRFIALEDDDQRTLRSALDSRVDKDFLGLRSSQWVAPKRK
Ga0209219_11490151	3300027565	Forest Soil	SETGGMLRLAGALEQGNLVEVTIETESGAVKGMAEILEPTRKSQDGILQPFRFIALEDNDHRTLRNALDSRVDKDFLGLRSTQWVAPKRQ
Ga0209115_10040653	3300027567	Forest Soil	LQSISETGGMLRLAGALEQGNLVEVAIQTESGAVKGMAEILQPTRKSKTEIMQPFRFIALEDDDQRVLRNVLDSRVDQDFLGLRSSQWVPPKRK
Ga0208827_12100491	3300027641	Peatlands Soil	LRLAGALEQGNLVEVTIETASGAVKAMAEILQPMRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0209626_11774561	3300027684	Forest Soil	LSDGHSARAKLQTISETGGMLRLAGALEQGNLVEVTIETESGAVKGMAEILQPTLKSKDGTLQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVQPKRQ
Ga0209248_100052173	3300027729	Bog Forest Soil	MLRLAGALEQGNLVEVAIQTESGAVKGMAEILQPTRKSKTEIMQPFRFIALEDDDQRVLRNVLDSRVDQDFLGLRSSQWVPPKRK
Ga0209772_101996932	3300027768	Bog Forest Soil	LVEVAIQTESGAVKGMAEILQPTRKSKTEIMQPFRFIALEDDDQRVLRNVLDSRVDQDFLGLRSSQWVPPKRK
Ga0209040_100799352	3300027824	Bog Forest Soil	MLRLAGALEQGNLVEVAFETESGAVKGMAEILQPTRKSTNETLQPFRFIALEDDDQRNLRNVLDSRMDQDFLGLRSSQWVAPKRK
Ga0209517_103081202	3300027854	Peatlands Soil	TESGAVKGMAEILQPTTRKSKDSSQDGILQPFRFIALEDDDQRTLRNALDSRVDKDFLGLRSTQWVAPKRK
Ga0209693_100566001	3300027855	Soil	MLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDNDQLTLRSALDSRVDQDFLGLRSSQWVAPKRK
Ga0209167_100015748	3300027867	Surface Soil	MLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKTKDEIMQPFRFIALEDDDQRTLRSALDSRVDQDFLGLRSSQWVAPKRK
Ga0209167_100807831	3300027867	Surface Soil	ETGGMLRLAGALDQGNLVEVTIETAAGAVKAMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0209167_101921932	3300027867	Surface Soil	ALEQGNLVEVVFETASGAVKGMAEILEPTRKSTTETLQPFRFIALEDDDHRTLRDALDSRVDKDFMGLRSSQWVAPKRK
Ga0209380_100158493	3300027889	Soil	MLRLAGALEQGNLIEVTIETASGAVKGMAEILEPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0209068_100417393	3300027894	Watersheds	MLRLAGALEQGNLVEVTIETEAGAVKGMAEILSPTRKSNDGILQPFRFIALEDDDHRTLRNALDSRVDRDFLGLRSSQWVAPKRQ
Ga0209415_100715015	3300027905	Peatlands Soil	MLRLAGALEQGNLVEVTIETASGAVKAMAEILQPTSKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0209415_111291722	3300027905	Peatlands Soil	RLAGALEQGNLVEVTIETESGAVKGMAEILEPTRKSKDGILQPFRFIALEDNDHRTLRDALDSRVDKDFLGLRSSQWVAPKRQ
Ga0265762_11319742	3300030760	Soil	LSQTGGMLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDNDQLTLRSALDSRVDQDFLGLRSSQWVAPKRK
Ga0265753_10441541	3300030862	Soil	GALEQGNLVEVTIETASGAVKAMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0265760_100402812	3300031090	Soil	MLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDNDHLTLRNALDTRVDKDFVGLRSPQWVAPKRK
Ga0265760_101636701	3300031090	Soil	QSVSQTGGMLRLAGALEQGNLVEVAFQTESGAVKGMAEILEPTRKSKNGTPDGTLQPFRFIALEDDDQRTLRSVLDSRVDQDFLGLRSSQWVAPKRK
Ga0170824_1018944201	3300031231	Forest Soil	MLRLAGSLEQGNLVEVTIETESGAVKGMAEILEPTRKSKDGIMQPFRFIALEDGDHLTLRNALDSRVDRDFLGLRSPQWVAPKRT
Ga0170820_120378791	3300031446	Forest Soil	MLRLAGALEQGNLVEITIETESGAVKGMAEILEPTRKSKDGIMQPFRFIALEDGDHLTLRNALDSRVDRDFLGLRSPQWVAPKRT
Ga0170820_166714312	3300031446	Forest Soil	SARAKLQTISETGGMLRLAGALEQGNLVEVTIETASGAVKGMAEILEPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPRRT
Ga0310686_1030443911	3300031708	Soil	ISETGGMLRLAGALEQGNLVEVTIETASGAVKAMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0310686_1077812633	3300031708	Soil	MLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKIKNEIMQPFRFIALEDNDHLTLRNALDTRVD
Ga0310686_1080011992	3300031708	Soil	MLRLAGALEQGNLVEVTIETASGAVKGMAEILEPTRKSKDGILQPFRFIALDDNDHRTLRNALDSRVDKDFLGLRSSLWVAPKRT
Ga0310686_1089770941	3300031708	Soil	QSISETGGMLRLAGALEQGNLVEVAFQTESGAVKGMAEILQPTRKTKNEIMQPFRFIALEDNDHLTLRNALDTRVDKDFVGLRSAQWVAPKRK
Ga0310686_1114101551	3300031708	Soil	QGNLVEVTIETASGAVKGMAEILQPTRKSKDGILQPFRFIALEDKDHLTLRNALDSRVDKDFLGLRSSQWVAPKRT
Ga0307478_100784331	3300031823	Hardwood Forest Soil	TIETESGAVKAMAEILQPTRKSKDGILQPFRFIALEDNDHRRLRNALDSRVDKDFLGLRSSQWVAPKRQ
Ga0307479_101497542	3300031962	Hardwood Forest Soil	LAGALEQGNLVEVTIETESGAVKAMAEILEPTRKFKDGILQPFRFIALEDNDHRTLRNALDSRVDKDFLGLRSSQWVAPKRQ
Ga0311301_118899372	3300032160	Peatlands Soil	GRSARAKLQTVSETGGMLRLAGALEQGNLVEVTIETESGAVKGMAEILEPTRKSKDGILQPFRFIALEDNDHRTLRDALDSRVDKDFLGLRSSQWVAPKRQ
Ga0307471_1029915441	3300032180	Hardwood Forest Soil	MLRLAGALEQGNLVEVTIETASGAVKAMAEILKPTRKSRDGILQPFRFIALDDNDHKTLSFAVDSTTERNFLLGSTKLSTRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099789

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences