Basic Information | |
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Family ID | F099790 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 103 |
Average Sequence Length | 89 residues |
Representative Sequence | MDPEREDIARWLDEGRELLAMLHEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA |
Number of Associated Samples | 92 |
Number of Associated Scaffolds | 103 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 78.43 % |
% of genes near scaffold ends (potentially truncated) | 22.33 % |
% of genes from short scaffolds (< 2000 bps) | 67.96 % |
Associated GOLD sequencing projects | 85 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.60 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (65.049 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.476 % of family members) |
Environment Ontology (ENVO) | Unclassified (28.155 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (37.864 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Mixed | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 73.73% β-sheet: 0.00% Coil/Unstructured: 26.27% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.60 |
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Pfam ID | Name | % Frequency in 103 Family Scaffolds |
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PF13561 | adh_short_C2 | 15.53 |
PF01182 | Glucosamine_iso | 9.71 |
PF04392 | ABC_sub_bind | 2.91 |
PF01702 | TGT | 2.91 |
PF02668 | TauD | 2.91 |
PF09411 | PagL | 2.91 |
PF00582 | Usp | 1.94 |
PF02900 | LigB | 1.94 |
PF02954 | HTH_8 | 1.94 |
PF07728 | AAA_5 | 0.97 |
PF14622 | Ribonucleas_3_3 | 0.97 |
PF10129 | OpgC_C | 0.97 |
PF01040 | UbiA | 0.97 |
PF07715 | Plug | 0.97 |
PF13174 | TPR_6 | 0.97 |
PF08308 | PEGA | 0.97 |
PF00589 | Phage_integrase | 0.97 |
PF00144 | Beta-lactamase | 0.97 |
PF01695 | IstB_IS21 | 0.97 |
PF03092 | BT1 | 0.97 |
PF00296 | Bac_luciferase | 0.97 |
PF00691 | OmpA | 0.97 |
PF05036 | SPOR | 0.97 |
PF00753 | Lactamase_B | 0.97 |
PF07883 | Cupin_2 | 0.97 |
PF12697 | Abhydrolase_6 | 0.97 |
PF08734 | GYD | 0.97 |
PF03773 | ArsP_1 | 0.97 |
PF10043 | DUF2279 | 0.97 |
PF12965 | DUF3854 | 0.97 |
COG ID | Name | Functional Category | % Frequency in 103 Family Scaffolds |
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COG0363 | 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase | Carbohydrate transport and metabolism [G] | 9.71 |
COG0343 | Queuine/archaeosine tRNA-ribosyltransferase | Translation, ribosomal structure and biogenesis [J] | 2.91 |
COG1549 | Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domains | Translation, ribosomal structure and biogenesis [J] | 2.91 |
COG2175 | Taurine dioxygenase, alpha-ketoglutarate-dependent | Secondary metabolites biosynthesis, transport and catabolism [Q] | 2.91 |
COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 2.91 |
COG0701 | Uncharacterized membrane protein YraQ, UPF0718 family | Function unknown [S] | 0.97 |
COG1484 | DNA replication protein DnaC | Replication, recombination and repair [L] | 0.97 |
COG1680 | CubicO group peptidase, beta-lactamase class C family | Defense mechanisms [V] | 0.97 |
COG1686 | D-alanyl-D-alanine carboxypeptidase | Cell wall/membrane/envelope biogenesis [M] | 0.97 |
COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | Coenzyme transport and metabolism [H] | 0.97 |
COG2367 | Beta-lactamase class A | Defense mechanisms [V] | 0.97 |
COG4274 | Uncharacterized conserved protein, contains GYD domain | Function unknown [S] | 0.97 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 65.05 % |
Unclassified | root | N/A | 34.95 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300004058|Ga0055498_10001194 | All Organisms → cellular organisms → Bacteria | 2312 | Open in IMG/M |
3300004145|Ga0055489_10116125 | Not Available | 787 | Open in IMG/M |
3300005294|Ga0065705_11022665 | Not Available | 532 | Open in IMG/M |
3300005341|Ga0070691_10007599 | All Organisms → cellular organisms → Bacteria | 4968 | Open in IMG/M |
3300005406|Ga0070703_10089234 | All Organisms → cellular organisms → Bacteria | 1066 | Open in IMG/M |
3300005440|Ga0070705_100106463 | All Organisms → cellular organisms → Bacteria | 1782 | Open in IMG/M |
3300005445|Ga0070708_100019457 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 5704 | Open in IMG/M |
3300005445|Ga0070708_100032596 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 4521 | Open in IMG/M |
3300005467|Ga0070706_100129859 | Not Available | 2351 | Open in IMG/M |
3300005467|Ga0070706_101352547 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 652 | Open in IMG/M |
3300005468|Ga0070707_100029295 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 5242 | Open in IMG/M |
3300005471|Ga0070698_101316869 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Rhodothermus → Rhodothermus marinus | 672 | Open in IMG/M |
3300005545|Ga0070695_100558344 | Not Available | 893 | Open in IMG/M |
3300005586|Ga0066691_10293058 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 959 | Open in IMG/M |
3300005875|Ga0075293_1066775 | All Organisms → cellular organisms → Bacteria | 535 | Open in IMG/M |
3300006041|Ga0075023_100027031 | Not Available | 1654 | Open in IMG/M |
3300006050|Ga0075028_100090076 | All Organisms → cellular organisms → Bacteria | 1548 | Open in IMG/M |
3300006172|Ga0075018_10606511 | All Organisms → cellular organisms → Bacteria | 583 | Open in IMG/M |
3300007255|Ga0099791_10030151 | All Organisms → cellular organisms → Bacteria | 2377 | Open in IMG/M |
3300009038|Ga0099829_10009914 | All Organisms → cellular organisms → Bacteria | 6130 | Open in IMG/M |
3300009038|Ga0099829_10026757 | All Organisms → cellular organisms → Bacteria | 4054 | Open in IMG/M |
3300009053|Ga0105095_10776826 | Not Available | 536 | Open in IMG/M |
3300009078|Ga0105106_10735478 | All Organisms → cellular organisms → Bacteria | 704 | Open in IMG/M |
3300009087|Ga0105107_10614668 | Not Available | 757 | Open in IMG/M |
3300009089|Ga0099828_10004952 | All Organisms → cellular organisms → Bacteria | 9505 | Open in IMG/M |
3300009089|Ga0099828_10243988 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1610 | Open in IMG/M |
3300009143|Ga0099792_10800871 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 617 | Open in IMG/M |
3300009153|Ga0105094_10749444 | Not Available | 573 | Open in IMG/M |
3300009162|Ga0075423_12612493 | Not Available | 552 | Open in IMG/M |
3300009166|Ga0105100_10288694 | Not Available | 984 | Open in IMG/M |
3300010360|Ga0126372_11042823 | Not Available | 832 | Open in IMG/M |
3300010400|Ga0134122_10837209 | All Organisms → cellular organisms → Bacteria | 883 | Open in IMG/M |
3300012202|Ga0137363_10105327 | All Organisms → cellular organisms → Bacteria | 2151 | Open in IMG/M |
3300012203|Ga0137399_10184419 | All Organisms → cellular organisms → Bacteria | 1686 | Open in IMG/M |
3300012357|Ga0137384_10891931 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7 | 717 | Open in IMG/M |
3300012361|Ga0137360_10563918 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 973 | Open in IMG/M |
3300012362|Ga0137361_10056371 | All Organisms → cellular organisms → Bacteria | 3264 | Open in IMG/M |
3300012363|Ga0137390_11794610 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 545 | Open in IMG/M |
3300012918|Ga0137396_10775267 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7 | 706 | Open in IMG/M |
3300012929|Ga0137404_11278554 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 676 | Open in IMG/M |
3300012931|Ga0153915_10240624 | All Organisms → cellular organisms → Bacteria | 2002 | Open in IMG/M |
3300012931|Ga0153915_11597161 | Not Available | 763 | Open in IMG/M |
3300012958|Ga0164299_10516751 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 798 | Open in IMG/M |
3300013297|Ga0157378_11882181 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 647 | Open in IMG/M |
3300017930|Ga0187825_10029817 | All Organisms → cellular organisms → Bacteria | 1837 | Open in IMG/M |
3300017936|Ga0187821_10017740 | Not Available | 2469 | Open in IMG/M |
3300017961|Ga0187778_10020558 | All Organisms → cellular organisms → Bacteria | 4049 | Open in IMG/M |
3300017974|Ga0187777_10019625 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 4291 | Open in IMG/M |
3300017997|Ga0184610_1018730 | Not Available | 1838 | Open in IMG/M |
3300018052|Ga0184638_1010389 | Not Available | 3137 | Open in IMG/M |
3300018058|Ga0187766_10214004 | All Organisms → cellular organisms → Bacteria | 1221 | Open in IMG/M |
3300018075|Ga0184632_10008363 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia | 4317 | Open in IMG/M |
3300018076|Ga0184609_10148159 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_73_47 | 1079 | Open in IMG/M |
3300018084|Ga0184629_10052116 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1871 | Open in IMG/M |
3300018422|Ga0190265_10063175 | All Organisms → cellular organisms → Bacteria | 3302 | Open in IMG/M |
3300018429|Ga0190272_12959432 | Not Available | 526 | Open in IMG/M |
3300019877|Ga0193722_1081537 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 793 | Open in IMG/M |
3300019881|Ga0193707_1025797 | All Organisms → cellular organisms → Bacteria | 1933 | Open in IMG/M |
3300019885|Ga0193747_1070174 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 864 | Open in IMG/M |
3300019886|Ga0193727_1065546 | Not Available | 1135 | Open in IMG/M |
3300019890|Ga0193728_1184093 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7 | 890 | Open in IMG/M |
3300020002|Ga0193730_1054978 | All Organisms → cellular organisms → Bacteria | 1145 | Open in IMG/M |
3300020199|Ga0179592_10308148 | Not Available | 703 | Open in IMG/M |
3300020581|Ga0210399_10018971 | All Organisms → cellular organisms → Bacteria | 5448 | Open in IMG/M |
3300020583|Ga0210401_10451190 | Not Available | 1149 | Open in IMG/M |
3300021088|Ga0210404_10008145 | All Organisms → cellular organisms → Bacteria | 4236 | Open in IMG/M |
3300021432|Ga0210384_11060050 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 713 | Open in IMG/M |
3300025885|Ga0207653_10004058 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 4608 | Open in IMG/M |
3300025910|Ga0207684_10014462 | All Organisms → cellular organisms → Bacteria | 6803 | Open in IMG/M |
3300025910|Ga0207684_10041452 | All Organisms → cellular organisms → Bacteria | 3903 | Open in IMG/M |
3300025910|Ga0207684_10255341 | Not Available | 1513 | Open in IMG/M |
3300025910|Ga0207684_11044272 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 682 | Open in IMG/M |
3300025922|Ga0207646_10106469 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 2515 | Open in IMG/M |
3300025957|Ga0210089_1004039 | All Organisms → cellular organisms → Bacteria | 1411 | Open in IMG/M |
3300026285|Ga0209438_1000363 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 13564 | Open in IMG/M |
3300026304|Ga0209240_1149104 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7 | 734 | Open in IMG/M |
3300026354|Ga0257180_1008957 | Not Available | 1168 | Open in IMG/M |
3300026359|Ga0257163_1008225 | All Organisms → cellular organisms → Bacteria | 1545 | Open in IMG/M |
3300026376|Ga0257167_1008866 | Not Available | 1306 | Open in IMG/M |
3300026469|Ga0257169_1078116 | Not Available | 539 | Open in IMG/M |
3300026480|Ga0257177_1023060 | Not Available | 892 | Open in IMG/M |
3300026481|Ga0257155_1053341 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 634 | Open in IMG/M |
3300026482|Ga0257172_1044457 | All Organisms → cellular organisms → Bacteria | 811 | Open in IMG/M |
3300026557|Ga0179587_11100799 | Not Available | 523 | Open in IMG/M |
3300027650|Ga0256866_1105562 | Not Available | 761 | Open in IMG/M |
3300027846|Ga0209180_10044119 | All Organisms → cellular organisms → Bacteria | 2444 | Open in IMG/M |
3300027894|Ga0209068_10010033 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium | 4483 | Open in IMG/M |
3300028047|Ga0209526_10088873 | All Organisms → cellular organisms → Bacteria | 2174 | Open in IMG/M |
3300028047|Ga0209526_10533811 | Not Available | 760 | Open in IMG/M |
3300028803|Ga0307281_10060750 | Not Available | 1207 | Open in IMG/M |
3300028828|Ga0307312_10783057 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 632 | Open in IMG/M |
3300029636|Ga0222749_10578609 | Not Available | 612 | Open in IMG/M |
3300030006|Ga0299907_10058989 | Not Available | 3077 | Open in IMG/M |
3300030620|Ga0302046_10891582 | Not Available | 712 | Open in IMG/M |
(restricted) 3300031150|Ga0255311_1006735 | Not Available | 2278 | Open in IMG/M |
(restricted) 3300031150|Ga0255311_1056835 | All Organisms → cellular organisms → Bacteria | 826 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10178067 | All Organisms → cellular organisms → Bacteria | 590 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10252781 | Not Available | 500 | Open in IMG/M |
3300031229|Ga0299913_10023262 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 5762 | Open in IMG/M |
3300031716|Ga0310813_10920578 | Not Available | 793 | Open in IMG/M |
3300032180|Ga0307471_100992924 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 1006 | Open in IMG/M |
3300033433|Ga0326726_10619379 | Not Available | 1041 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 17.48% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 15.53% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 14.56% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 11.65% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 4.85% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 4.85% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 3.88% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 3.88% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 2.91% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 2.91% |
Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 1.94% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 1.94% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.94% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 1.94% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.97% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.97% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.97% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.97% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.97% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 0.97% |
Rice Paddy Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil | 0.97% |
Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 0.97% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.97% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.97% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300004058 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 | Environmental | Open in IMG/M |
3300004145 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 | Environmental | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
3300005586 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 | Environmental | Open in IMG/M |
3300005875 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101 | Environmental | Open in IMG/M |
3300006041 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 | Environmental | Open in IMG/M |
3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
3300006172 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014 | Environmental | Open in IMG/M |
3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
3300009053 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 | Environmental | Open in IMG/M |
3300009078 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 | Environmental | Open in IMG/M |
3300009087 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 | Environmental | Open in IMG/M |
3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
3300009153 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 | Environmental | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300009166 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 | Environmental | Open in IMG/M |
3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
3300012357 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG | Environmental | Open in IMG/M |
3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
3300012918 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG | Environmental | Open in IMG/M |
3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012931 | Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG | Environmental | Open in IMG/M |
3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300017930 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5 | Environmental | Open in IMG/M |
3300017936 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1 | Environmental | Open in IMG/M |
3300017961 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG | Environmental | Open in IMG/M |
3300017974 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG | Environmental | Open in IMG/M |
3300017997 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex | Environmental | Open in IMG/M |
3300018052 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2 | Environmental | Open in IMG/M |
3300018058 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG | Environmental | Open in IMG/M |
3300018075 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1 | Environmental | Open in IMG/M |
3300018076 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex | Environmental | Open in IMG/M |
3300018084 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1 | Environmental | Open in IMG/M |
3300018422 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T | Environmental | Open in IMG/M |
3300018429 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T | Environmental | Open in IMG/M |
3300019877 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1 | Environmental | Open in IMG/M |
3300019881 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2 | Environmental | Open in IMG/M |
3300019885 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2 | Environmental | Open in IMG/M |
3300019886 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2 | Environmental | Open in IMG/M |
3300019890 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1 | Environmental | Open in IMG/M |
3300020002 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1 | Environmental | Open in IMG/M |
3300020199 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025957 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes) | Environmental | Open in IMG/M |
3300026285 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes) | Environmental | Open in IMG/M |
3300026304 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes) | Environmental | Open in IMG/M |
3300026354 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B | Environmental | Open in IMG/M |
3300026359 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A | Environmental | Open in IMG/M |
3300026376 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B | Environmental | Open in IMG/M |
3300026469 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B | Environmental | Open in IMG/M |
3300026480 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B | Environmental | Open in IMG/M |
3300026481 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A | Environmental | Open in IMG/M |
3300026482 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B | Environmental | Open in IMG/M |
3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
3300027650 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq | Environmental | Open in IMG/M |
3300027846 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027894 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes) | Environmental | Open in IMG/M |
3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300028803 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120 | Environmental | Open in IMG/M |
3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
3300029636 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030006 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 | Environmental | Open in IMG/M |
3300030620 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111 | Environmental | Open in IMG/M |
3300031150 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4 | Environmental | Open in IMG/M |
3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
3300031229 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 | Environmental | Open in IMG/M |
3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0055498_100011943 | 3300004058 | Natural And Restored Wetlands | MDPEREDTARWLDEGRDLLSMLHDEIEHLTQENERLRAELGRLDELEGVIARVNRDADRLRAERDELLAGFRRMADLVDQIRRSRGAER* |
Ga0055489_101161252 | 3300004145 | Natural And Restored Wetlands | QSHPRLVQSATGGAILPGRTSRMDPEREDTARWLDEGLELLGMLHDEVDHLTQENERLRAELGRLDELQAVIARVNRDADRLRAERDELLAGFRRMADLVEEMRRSREAGR* |
Ga0065705_110226651 | 3300005294 | Switchgrass Rhizosphere | MDPEREDTARWIDEGLELLSMLHDEVENLARENERLRAELGRLDELQAVIERVNRDADRLRAERDELLEGFHRMADLVEQIRRSRGAAR* |
Ga0070691_100075993 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | MDPEREDIARWLDEGRELLGMLHEQVEHLAQDNERLRAELGRLDELQAVVARVNRDNDKLRAERDELLAAMRRIADVVEQLRESRGWGRDG* |
Ga0070703_100892342 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | MDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA* |
Ga0070705_1001064631 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | ELNDRMDAEHEDAARWLEEGHRFLGRWQEELEALIAENERLRAELGRLDAVQAEIARVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA* |
Ga0070708_1000194573 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MSTPEDLARWLEEGRELLRMLNEQVEYLAQENERLRAETARLDELQAVIARVNQDNDRLRAERDELLAAFRRMADLVEEVRHSRGGGVAG* |
Ga0070708_1000325964 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MDPEREDIARWLDEGRELLGMLHEQVEHLAQDNERLRAELGRIDELQAVIARVNQDNDRLRDERDELLAAFRRVADVVEQLRTARGWGVGG* |
Ga0070706_1001298595 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MSTPEDLARWLEESRELLRMLNEQVEYLAQENERLRAELGRLDELQAVIAHVNQDNDRLRAERDELLAAFRRIEDLMEQVRHSRGGGAVG* |
Ga0070706_1013525472 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MSTPEDLARWLEEGRELLRMLNEQVEYLTQENERLRAELARMDELQAGIARVNQDNDRLRAERDELLAAFRRMADLVEEVRHSRGGGGAG* |
Ga0070707_1000292959 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MSTPEDLARWLEEGRELLRMLNEQVEYLAQENERLRAELGRLDELQAVIARVNQDNDRLRAERGELLAAFRCMADLVHQVRQARGGGVEG* |
Ga0070698_1013168691 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | VTDRMDPDREDTARWLDEGRELLALLHEQVEHLAQENERLRAELRLLDELQAVIARVNQDNDRLRAERDELLAAFRRLAELAEELRRSSGGGLEG* |
Ga0070695_1005583442 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MDPEREDTARWLDEGRELLGMLHEQVEHLAQDNERLRAELGRLDELRAVIARVNEDNDRLRAERDELLTAFRRVADVVEDLRRSRGPAA* |
Ga0066691_102930581 | 3300005586 | Soil | MDPEREDIARWLDEGRELLGMLHEQVEHLAQDNERLRAELGRIDELQAVIASVNQDNDRLRDERDELLAAFRRVADVVEQLRT |
Ga0075293_10667752 | 3300005875 | Rice Paddy Soil | MDPEREDIARWLDEGRELLGMLHEQVEHLAQDNERLRAELGRLDELQAVVARVNRDNDKLRAERDELLAAMRRIADVVEQLRESRGWGRD |
Ga0075023_1000270312 | 3300006041 | Watersheds | MDPEREDTARWLEEGRELLAMLHEQVDHLAQDNERLRAELGRLDELQAVIVHVNQDNDRLRAERDELLATFRRVADMVAQVRPSRGRPNTE* |
Ga0075028_1000900763 | 3300006050 | Watersheds | MDPEREDTARWLEEGRELLALLHEQVDHLAQDNERLRAELGRLDELQAVIVHVNQDNDRLRAERDELLATFRRVADMVAQVRPSRGRPNTE* |
Ga0075018_106065112 | 3300006172 | Watersheds | MDPEREDIARWLDEGRELLAMLHEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDRLRDERDELLATFRRVADVVEQLRESRSRGQA* |
Ga0099791_100301512 | 3300007255 | Vadose Zone Soil | MDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELTRIDELQAVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA* |
Ga0099829_100099141 | 3300009038 | Vadose Zone Soil | MNPEREDTSRWLDEGRELLSMLHDEIEHLAQDNERLRAELGRLDELQAVIARVNRDADRLRAERDELLAGFRRMADLMEQIRRSRGAKG* |
Ga0099829_100267572 | 3300009038 | Vadose Zone Soil | MDPEREGTARWLEEGRELLGMLHDEVEHLAQENERLRAELGRLDQLQAAIARVNQDNDRLRAERDELLAGFRRIADLVEELRRSRGTQG* |
Ga0105095_107768262 | 3300009053 | Freshwater Sediment | MDPEREDTARWLDEGRELLSMLHDEVEHLTQENERLRGELGRLDELQAVIARVNRDADRLRAERDELLAGFRRMADLVDQIRRSRGAKG* |
Ga0105106_107354782 | 3300009078 | Freshwater Sediment | MNPEREDTARWLEEGRELLSMLHDEVEQLGHENERLRAELGRLDQLQAVIARVNQDNDRLRVERDELLASFRRVASLVEQIQRARGAKE* |
Ga0105107_106146682 | 3300009087 | Freshwater Sediment | MDPEREDTGRWLDEGRELLSMLHDEVEHLTQENERLRGELGRLDELQAVIARVNRDADRLRAERDELLAGFRRMADLVEEIRRSRGAGR* |
Ga0099830_110227681 | 3300009088 | Vadose Zone Soil | ELLGMLHEQIEHLAQENERLRAELGRLDELQTVIARVNQDNDRLRAERDELLAAFRRIADLVEQVRQSRGGGVAG* |
Ga0099828_1000495212 | 3300009089 | Vadose Zone Soil | MDPEREGTARWLEEGRELLGMLHDEVEHLAQENERLRAELGRLDQLQAAIARVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA* |
Ga0099828_102439883 | 3300009089 | Vadose Zone Soil | MNPEREDTARWLDEGRELLSMLHDEIEHLAQDNERLRAELGRLDELQAVIARVNRDADRLRAERDELLAGFRRMADLMEQIRRSRGAKG* |
Ga0099792_108008711 | 3300009143 | Vadose Zone Soil | MDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELTRIDELQAVIVRVNQDNDRLRAERDELLATFRRVADVVEQ |
Ga0105094_107494442 | 3300009153 | Freshwater Sediment | MDPEREDTARWLDEGRELLSMLHDEVDHLTQENQRLRAELGRLDELQAVIARVNRDADRLRAERDELLVGFRRMA |
Ga0075423_126124931 | 3300009162 | Populus Rhizosphere | MSAPEDLARWLEEGRELLRMLNEQVEYLAQENERLRAETARLDELQAVIARVNQDNDRLRAERDELLAAFRRMADLVEEVRHSRGGGVAG* |
Ga0105100_102886941 | 3300009166 | Freshwater Sediment | MDPEREDTARWLDEGRELLSMLHDEVDHLTQENQRLRAELGRLDELQAVIARVNRDADRLRAERDELLAGFRRMADLVEEIRRSRGAGR* |
Ga0126372_110428232 | 3300010360 | Tropical Forest Soil | DREDTARWLEEGRELLAMLHERIELVAQENDRLRAELRRLEELQAVLTRVNQDNDRLRAERDELLAAFRHFADMIERAQQPRGGEASG* |
Ga0134122_108372092 | 3300010400 | Terrestrial Soil | MTMDPEREDIVRWLDEGRELLGMLHEQVEHLAQDNERLRAELGRLDELRAVIARVNEDNDRLRAERDELLTAFRRVADVVEDLRRSRGPAA* |
Ga0137363_101053274 | 3300012202 | Vadose Zone Soil | LDEGRELLAMLYEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA* |
Ga0137399_101844192 | 3300012203 | Vadose Zone Soil | MDPEREDIARWLDEGRELLGMLHEQFEHLAQDNERLRAELGRIDELQAVIARVNQDNDRLRDERDELLAAFRRVADVVEQLRTARGWGVGG* |
Ga0137384_108919311 | 3300012357 | Vadose Zone Soil | IARWLDEGRELLGMLHEQVEHLAQDNERLRAELGRIDELQAVIARVNQDNDRLRDERDELLAAFRRVADVVEQLRTARGWGVGG* |
Ga0137360_105639182 | 3300012361 | Vadose Zone Soil | MDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELTRIDELQAVIVRVNQDNDRLRAERDELLATFRRVADVVEQPRESRSRGQA* |
Ga0137361_100563713 | 3300012362 | Vadose Zone Soil | MDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELARIDELQGVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA* |
Ga0137390_117946102 | 3300012363 | Vadose Zone Soil | MDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELTRIDELQAVIVRVNQDNDRLRAERDELLAAFRRVADVVEQLRTARGWGVGG* |
Ga0137396_107752672 | 3300012918 | Vadose Zone Soil | TMDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELTRIDELQAVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA* |
Ga0137404_112785541 | 3300012929 | Vadose Zone Soil | MDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDRLRAERDELLATFRR |
Ga0153915_102406244 | 3300012931 | Freshwater Wetlands | MDPEREDIARWLDEGRELLGMLHEQVEHLAQDNERLRAELGRLDELQAVIARVNRDNDRLRAERDELLAALRRIADVVEQLRESRGWGRDG* |
Ga0153915_115971611 | 3300012931 | Freshwater Wetlands | REDIARWLDEGRELLDMLHEQVEHLAQDNERLRAELGRLDELQGVIARINHDNDRLRAERDELLEAFRRIADVVQQLRESRG* |
Ga0164299_105167512 | 3300012958 | Soil | MDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDQLRAERDELLATFRRVADVVEQLRESRSRGQA* |
Ga0157378_118821811 | 3300013297 | Miscanthus Rhizosphere | MDPEREDIARWLDEGRELLAMLHEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDQLRAERDELLATFRRVADVVEQLRESRSRGQA* |
Ga0187825_100298172 | 3300017930 | Freshwater Sediment | MDPEREDIARWLDEGRELLGMLHEQVEHLAQDNERLRAELARLDELRAVIARINQDNDKLRADRDESLAALRRIADVVEHLRESRGWGRDG |
Ga0187821_100177403 | 3300017936 | Freshwater Sediment | MDPDREDIARWLEEGRELLGMLQEQVDHLAQENERLRAEVGRLDDLQAVIARVNKDNDRLRADRDELRATLRRVTDIVAHARHSYRWGGTHEA |
Ga0187778_100205584 | 3300017961 | Tropical Peatland | MDPDRTNPARWFDAGHDLLGVLHGHIERLAQENERLRAELGRLDELGVRLARVNQDNDRLRQERDELLAAFRRMADVIAQLRQSRGEGREG |
Ga0187777_100196253 | 3300017974 | Tropical Peatland | MDPDRTNPARWFDAGHDLLGVLHGHIERLAQENERLRAELGRLDELGARLGRVNQDNDRLRQERDELLAAFRRMADVIAQLRQSRGEGREG |
Ga0184610_10187302 | 3300017997 | Groundwater Sediment | MDPEREDTARWLEEGRELLGMLHDEVEHLAQENERLRAELGRLDQLQAVIARVNQDNDRLRAERDELLAGFRRIADLVEELRRSRGTRG |
Ga0184638_10103894 | 3300018052 | Groundwater Sediment | MDPEREDTARWLEEGRELLGMLHDEVEHLAQENERLRAELGRLDQLQAVIARVNQDNDRLRAERDELLAGFRRIADLVEELRRSRGTQG |
Ga0187766_102140043 | 3300018058 | Tropical Peatland | MDPDRTNPARGFDAGHDLLGVLHGHIERLAQENERLRAELGRLDELGVRLARVNQDNDRLRQERDELLAAFRRMADVIAQLRQSRGEGREG |
Ga0184632_100083636 | 3300018075 | Groundwater Sediment | MDPEREDTARWLEEGRELLGMLHDEVEHLAQENERLRAELGRLDQLQAVIARINQDNDRLRAERDELLAGFRRIADLVEELRRSRGTQG |
Ga0184609_101481592 | 3300018076 | Groundwater Sediment | MDPEREDTARWLEEGRELLGMLHDEVEYLAQENERLRAELGRLDQLQAVIARVNQDNDRLRAERDELLAGFRRIADLVEELRRSRGTQG |
Ga0184629_100521161 | 3300018084 | Groundwater Sediment | MDPEREDTARWLEEGRELLGLLHDEVEHLAQENERLRAELGRLDELQAVIARVNRDADRLRAERDELLAGFRRMADLMEQI |
Ga0190265_100631754 | 3300018422 | Soil | MNPEREDTARWLEEGRELLGMLHEEVEHLGQENEQLRSELGRLDQLQAVIARINQDNDRLRAERDELLEGFRRMADLVEQIRHSRGVGD |
Ga0190272_129594321 | 3300018429 | Soil | MRRMDPEREDTARWLEEGRELLGMLHDEVEHLAQENERLRAELGRLDQLQAVIARINQDNDRLRAERDELLAGFRRIADLVEELRRSRGTQG |
Ga0193722_10815372 | 3300019877 | Soil | MDPEREDIARWLDEGRELLAMLHEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDRLRDERDELLATFRRVADVVEQLRESRSRGQS |
Ga0193707_10257973 | 3300019881 | Soil | MDPEREDIARWLDEGRELLAMLHEQVEHLAQDNERLRAELARIDELQAVIVRVNEDNDRLRDERDELLATFRRVADVVEQLRESRSRGQA |
Ga0193747_10701741 | 3300019885 | Soil | MDPEREDIARWLDEGRELLAMLHEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDRLRDERDELLATFRRVADVVEQLRESRSRGQA |
Ga0193727_10655461 | 3300019886 | Soil | RELLGMLHDEVEHLAQENERLRAELGRLDQLQAAIARVNQDNDRLRAERDELLAGFRRIADLVEELRRSRGTQG |
Ga0193728_11840931 | 3300019890 | Soil | SGHGLRAGASDLTMDPEREDIARWLDEGRELLAMLHEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDRLRDERDELLATFRRVADVVEQLRESRSRGQA |
Ga0193730_10549782 | 3300020002 | Soil | MDPEREDIARWLDEGRELLAMLHEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDQLRAERDELLATFRRVADVVEQLRESRSRGQS |
Ga0179592_103081481 | 3300020199 | Vadose Zone Soil | GAEDLTMDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELTRIDELQAVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA |
Ga0210399_1001897110 | 3300020581 | Soil | AHWLDEGRELLGMLHEQIDHLAQDNERLRAELGRLDELRAVIARVNQDNDRLRAERDELLAAFRRMADVIDQLRQSRGW |
Ga0210401_104511903 | 3300020583 | Soil | MDPDREDTARWLDEGRELLGMLHEQIDHLAQDNERLRAELGRLDELQAVIARVNQDNDRLRAERDELLAAFRRMADVIDQLRQSRGW |
Ga0210404_100081452 | 3300021088 | Soil | MDPDREDTAHWLDEGRELLGMLHEQIDHLAQDNERLRAELGRLDELRAVIARVNQDNDRLRAERDELLAAFRRMADVIDQLRQSRGW |
Ga0210384_110600502 | 3300021432 | Soil | MDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELARIDELQGVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA |
Ga0207653_100040586 | 3300025885 | Corn, Switchgrass And Miscanthus Rhizosphere | MDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA |
Ga0207684_100144629 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MDPEREDIARWLDEGRELLGMLHEQVEHLAQDNERLRAELGRIDELQAVIARVNQDNDRLRDERDELLAAFRRVADVVEQLRTARGWGVGG |
Ga0207684_100414526 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MSTPEDLARWLEESRELLRMLNEQVEYLAQENERLRAELGRLDELQAVIAHVNQDNDRLRAERDELLAAFRRIEDLMEQVRHSRGGGAVG |
Ga0207684_102553413 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | VTDRMDPDREDTARWLDEGRELLALLHEQVEHLAQENERLRAELRLLDELQAVIARVNQDNDRLRAERDELLAAFRRLAELAEELRRSSGGGLEG |
Ga0207684_110442721 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MSTPEDLARWLEEGRELLRMLNEQVEYLTQENERLRAELARMDELQAGIARVNQDNDRLRAERDELLAAFRRMADLVEEVRHSRGGGGAG |
Ga0207646_101064692 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MSTPEDLARWLEEGRELLRMLNEQVEYLAQENERLRAELGRLDELQAVIARVNQDNDRLRAERGELLAAFRCMADLVHQVRQARGGGVEG |
Ga0210089_10040392 | 3300025957 | Natural And Restored Wetlands | MDPEREDTARWLDEGRDLLSMLHDEIEHLTQENERLRAELGRLDELEGVIARVNRDADRLRAERDELLAGFRRMADLVDQIRRSRGAER |
Ga0209438_10003633 | 3300026285 | Grasslands Soil | MDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELTRIDELQAVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA |
Ga0209240_11491041 | 3300026304 | Grasslands Soil | MDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELARIDELQTVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA |
Ga0257180_10089572 | 3300026354 | Soil | MDPEREGTARWLEEGRELLGMLHDEVEHLAQENERLRAELGRLDQLQAAIARVNQDNDRLRAERDELLAGFRRIADLVEELRRSRGTQG |
Ga0257163_10082252 | 3300026359 | Soil | MDPEREDMARWLDEGRELLAMLYEQVEHLAQDNERLRAELTRIDELQAVIVRVNQDNDQLRAERDELLATFRRVADVVEQLRESRSRGQA |
Ga0257167_10088662 | 3300026376 | Soil | MDPEREGTARWLEEGRELLGMLHDEVEHLAQENERLRAELGRLDQLQAVIARVNQDNDRLRAERDELLAGFRRIADLVEELRRSRGTQG |
Ga0257169_10781161 | 3300026469 | Soil | MDAEREDTARWLEEGRELLGMLHDEVEHLAQENERLRAELGRLDQLQAVIARVNQDNDRLRAERDELLAGFRRIADLVEELRRSRGTQG |
Ga0257177_10230602 | 3300026480 | Soil | MNPEREDTARWLDEGRELLSMLHDEIEHLAQDNERLRAELGRLDELQAVIARVNRDADRLRAERDELLAGFRRMADLMEQIRRSRGAKG |
Ga0257155_10533412 | 3300026481 | Soil | MDPEREDMARWLDEGRELLAMLYEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDQLRAERDELLATFRRVADVVEQLRESRSRGQA |
Ga0257172_10444572 | 3300026482 | Soil | MDPEREDMARWLDEGRELLAMLYEQVEHLAQDNERLRAELTRIDELQAVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA |
Ga0179587_111007991 | 3300026557 | Vadose Zone Soil | LTMDPEREDIARWLDEGRELLAMLYEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA |
Ga0256866_11055621 | 3300027650 | Soil | MDPEREDTARWLDEGRELLSTLHDEVEHLTQENERLRAELGRLDELQAVIARVNRDADRLRAERDELLVGFRRIADLVEQIRRSRGAKG |
Ga0209180_100441191 | 3300027846 | Vadose Zone Soil | ARWLDEGRELLSMLHDEIEHLAQDNERLRAELGRLDELQAVIARVNRDADRLRAERDELLAGFRRMADLMEQIRRSRGAKG |
Ga0209068_100100335 | 3300027894 | Watersheds | MDPEREDTARWLEEGRELLAMLHEQVDHLAQDNERLRAELGRLDELQAVIVHVNQDNDRLRAERDELLATFRRVADMVAQVRPSRGRPNTE |
Ga0209526_100888732 | 3300028047 | Forest Soil | MDPEREDIARWLDEGRELLAMLHEQVEHLAQDNERLRAELARIDELQAVIVRVNQDNDRLRAERDELLATFRRVADVVEQLRESRSRGQA |
Ga0209526_105338113 | 3300028047 | Forest Soil | TDHMDPDREDTARWLDEGRELLGMLHEQIDHLAQDNERLRAELGRLDELQAVIARVNQDNDRLRAERDELLAAFRRMADVIDQLRQSRGW |
Ga0307281_100607502 | 3300028803 | Soil | MDPEREDTARWLEEGRELLGMLHDEVEHLAQENERLRAELGRLDELQAVIARVNRDNDRLRTERDELLAAFRRMADLVEQIRHSRGARG |
Ga0307312_107830572 | 3300028828 | Soil | MDPEREDMARWLDEGRELLAMLYEQVEHLAQDNERLRAELARIDELQAVIVRINQDNDQLRDERDELLATFRRVADVVEQLRESRSRGQA |
Ga0222749_105786092 | 3300029636 | Soil | MDPDREDTARWLDEGRELLGMLHEQIDHLAQDNERLRAELGRLDELQAVIARVNQDNDRLRAERDELLAAFRRMADVI |
Ga0299907_100589891 | 3300030006 | Soil | MDPEREDTARWLDEGRELLSMLHDEVEHLAQENERLRGELGRLDELQAVIARVNRDADRLRAERDELLVGFRRIADLVEQIRRSRGAKG |
Ga0302046_108915822 | 3300030620 | Soil | MDPEREDTARWLDEGRELLSMLHDEVEHLAQENERLRDELGRLDELQAVIARVNRDADRLRAERDELLVGFRRMADLVEQIRRSRGAKG |
(restricted) Ga0255311_10067352 | 3300031150 | Sandy Soil | MDPEREDIARWLDEGRELLGMLHEQVEHLAQDNERLRAELGRLDELQGVIARVNHDNDKLRAERDELMAALRRIAEVVEHLRESRGWGRDG |
(restricted) Ga0255311_10568352 | 3300031150 | Sandy Soil | MNPEREDTARWLEEGRELLGMLHDEVEQLGHENERLRAELGRLDQLQAVIARVNQDNDRLRVERDELLASFRRIASLVEQIQRARGAKE |
(restricted) Ga0255310_101780672 | 3300031197 | Sandy Soil | WLEEGRELLGMLHDEVEQLGHENERLRAELGRLDQLQAVIARVNQDNDRLRVERDELLASFRRVASLVEQIQRARGAKE |
(restricted) Ga0255310_102527812 | 3300031197 | Sandy Soil | MDPEREDTARWLDEGLELLSMLHDEVDHLTQENERLRAELGRLDELQAVIARVNRDADRLRAERDELLAGFRRMADLVEEMRRSREAGR |
Ga0299913_100232624 | 3300031229 | Soil | MDPEREDTARWLDEGRELLSTLHDEVEHLTQENERLRAELGRLDELQAVIARVNRDADRLRAERDELVVGFRRIADLVEQIRRSRGAKG |
Ga0310813_109205782 | 3300031716 | Soil | MDPEREDTARWLDEGRELLGMLHEQVEHLAQDNERLRAELARLDELQAVIARINRDNDKLRAERDELLAALRRIADVLEHLRESRGWGRDG |
Ga0307471_1009929241 | 3300032180 | Hardwood Forest Soil | MSTPEDLARWLEEGRELLRMLNEQVEYLARENERLRAETARLDELQGVIARVNQDNDRLRAERDELLGAFRRMADLVEEVRHSRGGGGAG |
Ga0326726_106193791 | 3300033433 | Peat Soil | MDPEREDVARWLEEGRELLGMLHEQVDHLAQENERLRAEVGRLDDLQAVIARINRDNDRLRAERDELLTIVRRVADMVEQVRHSRGGDRTE |
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