Metagenome / Metatranscriptome Family F099836

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099836
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	96 residues
Representative Sequence	CSKRQPQSFMGNLMQQVSGKADVTTNKNGILISKDGKEGTDLIDEALRYNGTLPAMTTPDAPTQRTVKPATPAADSKSKSANGNGGAPAAVVKP
Number of Associated Samples	85
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.94 %
% of genes near scaffold ends (potentially truncated)	96.12 %
% of genes from short scaffolds (< 2000 bps)	93.20 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (9.709 % of family members)
Environment Ontology (ENVO)	Unclassified (47.573 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.932 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.57% β-sheet: 4.92% Coil/Unstructured: 79.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00188	CAP	11.65
PF00288	GHMP_kinases_N	1.94
PF00834	Ribul_P_3_epim	1.94
PF13525	YfiO	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	11.65
COG0036	Pentose-5-phosphate-3-epimerase	Carbohydrate transport and metabolism [G]	1.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	85.44 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	6.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	84.47 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	6.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.94 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	82.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	6.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.94 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	0.97 %
Chloracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	0.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	82.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	6.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.94 %
Chloracidobacterium thermophilum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	0.97 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	0.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	82.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	6.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.94 %
Chloracidobacterium thermophilum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	0.97 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	0.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	82.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	6.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.94 %
Chloracidobacterium thermophilum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	0.97 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	0.97 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_12063923	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1246	Open in IMG/M
3300003319\|soilL2_10148721	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1093	Open in IMG/M
3300003321\|soilH1_10109655	All Organisms → cellular organisms → Bacteria	2616	Open in IMG/M
3300004157\|Ga0062590_101172476	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	746	Open in IMG/M
3300004157\|Ga0062590_102006730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	600	Open in IMG/M
3300004480\|Ga0062592_102484639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	521	Open in IMG/M
3300004643\|Ga0062591_101516700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	671	Open in IMG/M
3300005093\|Ga0062594_101105740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	775	Open in IMG/M
3300005184\|Ga0066671_10165554	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1302	Open in IMG/M
3300005293\|Ga0065715_10056831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	603	Open in IMG/M
3300005293\|Ga0065715_10613666	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	700	Open in IMG/M
3300005293\|Ga0065715_10730834	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	639	Open in IMG/M
3300005294\|Ga0065705_11084589	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	526	Open in IMG/M
3300005337\|Ga0070682_100007998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	5952	Open in IMG/M
3300005337\|Ga0070682_100087967	All Organisms → cellular organisms → Bacteria	2026	Open in IMG/M
3300005340\|Ga0070689_100934785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	769	Open in IMG/M
3300005343\|Ga0070687_100530307	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	798	Open in IMG/M
3300005343\|Ga0070687_100656968	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	727	Open in IMG/M
3300005343\|Ga0070687_101341088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	533	Open in IMG/M
3300005354\|Ga0070675_101015309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	762	Open in IMG/M
3300005364\|Ga0070673_100387173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1248	Open in IMG/M
3300005364\|Ga0070673_101138969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	730	Open in IMG/M
3300005366\|Ga0070659_100801455	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	819	Open in IMG/M
3300005438\|Ga0070701_10618128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	719	Open in IMG/M
3300005440\|Ga0070705_100743649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	775	Open in IMG/M
3300005444\|Ga0070694_100856953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	748	Open in IMG/M
3300005466\|Ga0070685_11191256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	579	Open in IMG/M
3300005539\|Ga0068853_100142825	All Organisms → cellular organisms → Bacteria	2150	Open in IMG/M
3300005539\|Ga0068853_101577998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	636	Open in IMG/M
3300005545\|Ga0070695_100166359	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1552	Open in IMG/M
3300005545\|Ga0070695_101139559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	640	Open in IMG/M
3300005546\|Ga0070696_100463448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1002	Open in IMG/M
3300005577\|Ga0068857_102533195	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	504	Open in IMG/M
3300005578\|Ga0068854_100293993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1312	Open in IMG/M
3300005616\|Ga0068852_101317270	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	744	Open in IMG/M
3300005618\|Ga0068864_100874073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	887	Open in IMG/M
3300005618\|Ga0068864_101921758	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	598	Open in IMG/M
3300005719\|Ga0068861_101532371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	655	Open in IMG/M
3300005719\|Ga0068861_102584356	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	512	Open in IMG/M
3300005841\|Ga0068863_101724434	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	636	Open in IMG/M
3300005844\|Ga0068862_100728605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	963	Open in IMG/M
3300005890\|Ga0075285_1038457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	618	Open in IMG/M
3300006169\|Ga0082029_1079738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	535	Open in IMG/M
3300006806\|Ga0079220_11588716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	566	Open in IMG/M
3300006847\|Ga0075431_100815889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	905	Open in IMG/M
3300006852\|Ga0075433_10376744	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1253	Open in IMG/M
3300006954\|Ga0079219_10088912	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300009093\|Ga0105240_11278394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	775	Open in IMG/M
3300009094\|Ga0111539_13237687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	525	Open in IMG/M
3300009147\|Ga0114129_11746009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	758	Open in IMG/M
3300009148\|Ga0105243_12670810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	539	Open in IMG/M
3300009162\|Ga0075423_11494693	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	724	Open in IMG/M
3300009177\|Ga0105248_13158492	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	524	Open in IMG/M
3300009553\|Ga0105249_12715166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	567	Open in IMG/M
3300009789\|Ga0126307_10361062	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1170	Open in IMG/M
3300010040\|Ga0126308_10442602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	872	Open in IMG/M
3300010046\|Ga0126384_12019092	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	552	Open in IMG/M
3300010047\|Ga0126382_12055406	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	545	Open in IMG/M
3300010362\|Ga0126377_13599957	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	501	Open in IMG/M
3300010373\|Ga0134128_10752051	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1081	Open in IMG/M
3300010397\|Ga0134124_10528064	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1145	Open in IMG/M
3300010399\|Ga0134127_11069069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	870	Open in IMG/M
3300010399\|Ga0134127_12219055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	628	Open in IMG/M
3300010399\|Ga0134127_12862596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	562	Open in IMG/M
3300010400\|Ga0134122_10580198	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1032	Open in IMG/M
3300010400\|Ga0134122_11011412	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	815	Open in IMG/M
3300011119\|Ga0105246_11238449	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	689	Open in IMG/M
3300011333\|Ga0127502_10824033	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	524	Open in IMG/M
3300012469\|Ga0150984_107388783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	586	Open in IMG/M
3300013105\|Ga0157369_12462461	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	527	Open in IMG/M
3300013306\|Ga0163162_12519461	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	592	Open in IMG/M
3300013308\|Ga0157375_13220291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	544	Open in IMG/M
3300013308\|Ga0157375_13351059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	534	Open in IMG/M
3300014157\|Ga0134078_10606976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	525	Open in IMG/M
3300014263\|Ga0075324_1128910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	567	Open in IMG/M
3300014326\|Ga0157380_10147471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2029	Open in IMG/M
3300014745\|Ga0157377_10569875	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	803	Open in IMG/M
3300014968\|Ga0157379_12574779	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	509	Open in IMG/M
3300015262\|Ga0182007_10221190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	669	Open in IMG/M
3300018476\|Ga0190274_13369489	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	539	Open in IMG/M
3300025315\|Ga0207697_10467876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	558	Open in IMG/M
3300025908\|Ga0207643_10927643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	564	Open in IMG/M
3300025917\|Ga0207660_11145485	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	633	Open in IMG/M
3300025918\|Ga0207662_11109457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	562	Open in IMG/M
3300025926\|Ga0207659_10288414	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300025935\|Ga0207709_10072231	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2194	Open in IMG/M
3300025936\|Ga0207670_11364061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	602	Open in IMG/M
3300025937\|Ga0207669_10954738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	719	Open in IMG/M
3300025942\|Ga0207689_11213296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	635	Open in IMG/M
3300025981\|Ga0207640_10060804	All Organisms → cellular organisms → Bacteria	2499	Open in IMG/M
3300026023\|Ga0207677_10852871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	819	Open in IMG/M
3300026023\|Ga0207677_11246821	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	682	Open in IMG/M
3300026067\|Ga0207678_10959876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	756	Open in IMG/M
3300026116\|Ga0207674_11289100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	700	Open in IMG/M
3300026118\|Ga0207675_101561502	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	680	Open in IMG/M
3300026118\|Ga0207675_102533628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	523	Open in IMG/M
3300027909\|Ga0209382_12007612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	554	Open in IMG/M
3300028380\|Ga0268265_11224086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	749	Open in IMG/M
3300028380\|Ga0268265_11584212	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	660	Open in IMG/M
3300031716\|Ga0310813_10834350	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	832	Open in IMG/M
3300031901\|Ga0307406_11689134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	561	Open in IMG/M
3300032002\|Ga0307416_103195642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	548	Open in IMG/M
3300032421\|Ga0310812_10492728	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.40%
Environmental	Environmental	46.60%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.40%
Terrestrial	Environmental → Terrestrial	45.63%
Aquatic	Environmental → Aquatic	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.24%
Freshwater	Environmental → Aquatic → Freshwater	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	22.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.39%
Loam	Environmental → Terrestrial → Soil → Loam	15.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	22.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	9.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	6.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.91%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.94%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.94%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.97%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_120639232	3300000890	Soil	EKAREQLNIIGAPIPEKGTPNPCSKKAQQGFVGNLMTQISGRADVTINKNGILISKDGKEGTDLIDEALKYNGQLPVKFTPDAPQTAPRTTVPTAPVDSK
soilL2_101487213	3300003319	Sugarcane Root And Bulk Soil	LMQQVSGRADVTVNKNGILISKDGKEGNDLIDEALKYNGTLPELTTPDAPTQRTIKPVAQPADQKNNKVNGNGAAPAAVVKP*
soilH1_101096552	3300003321	Sugarcane Root And Bulk Soil	NPCSKRQPQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPALTTPDAPTQRSIKPVTPPADQKSKSGANGNGAGAPAAVVKP*
Ga0062590_1011724762	3300004157	Soil	PEKSTPNPCAKKTQQSFVGNLMQQVSGKADVTVNKNGILISKDGKEGTDLIDEALKYNGSLPAQTTPDAPTQRTVKPTPAVDSKGKNSNGNGAAAVAKP*
Ga0062590_1020067301	3300004157	Soil	QLSIIGAPVPDKAAPNRCSKRQQQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGSDLIDEALRYNGTLPASTTPDAPTQRSIPKTPAADPKTRNATSGAAPTASTPAPSPAVIKP*
Ga0062592_1024846391	3300004480	Soil	NLMQQVSGRADVTVNKNGILISKDGKEGSDLIDEALRYNGTLPALTTPDAPTQRSPKPATPSDAKSKSGANGNGNAPAAVVKP*
Ga0062591_1015167001	3300004643	Soil	PCSKRQAQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALKYNGTLPDKRTPDAPTQRSPRAQTAPQPAAATNGTTAPAAIKP*
Ga0062594_1011057402	3300005093	Soil	STPNPCSSKKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGTDLIDEALRYNGSLPELTTPDAPTQRTPAKTAVPAAADPKNKSANGNGASPAAAIKP*
Ga0066671_101655543	3300005184	Soil	SFVGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPANATPEAPTQRSTKPAPAPAVDSKTRNAGTGPSAVKP*
Ga0065715_100568311	3300005293	Miscanthus Rhizosphere	KSVPNRCSKRQQQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALKYNGTLPELTTPDAPTQRTVKPVAQPQPSDQKTKSVNGXGAAPAAVVKP*
Ga0065715_106136661	3300005293	Miscanthus Rhizosphere	NPCSKRQPQSFMGNLMQQVSGRADITVNKNGILISKDGKEGTDLIDEALRYNGTLPELTTPDAPTQRTIKPATSPADQKSKSGANGNGAPAAVVKP*
Ga0065715_107308342	3300005293	Miscanthus Rhizosphere	QQSFVGNLMQQVSGKADVTVNKNGILISKDGKEGTDLIDEALKYNGSLPAQTTPDAPTQRTVKPAPAVDSKGKNNNGNGAAAVAKP*
Ga0065705_110845892	3300005294	Switchgrass Rhizosphere	NPCSAKKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGTDLIDEALRYNGTLPVLTTPDAPTQRTVKPAATPASDSKSKSVNGNGVAPAAVVKP*
Ga0070682_10000799811	3300005337	Corn Rhizosphere	KRQAQSFMGNLMQQVSGKADVTTNKNGILISKDGKEGKDLIDEALRYNGTLPVLTTPDAPTQRSPKASGAQPSASTSAPAPAAIKP*
Ga0070682_1000879671	3300005337	Corn Rhizosphere	PNPCSSKKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGTDLIDEALRYNGSLPELTTPDAPTQRTPAKTAVPAAADPKNKSANGNGASPAAAIKP*
Ga0070689_1009347852	3300005340	Switchgrass Rhizosphere	AKKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGSDLIDEALRYNGTLPVMTTPDAPTQRTVKPATPAADSKSKSANGNGGAPAAVVKP*
Ga0070687_1005303071	3300005343	Switchgrass Rhizosphere	GAPVPDKSVPNRCSKRQSQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPVMTTPDAPTQRTVKPATPAADSKSKSANGNGGAPAAVVKP*
Ga0070687_1006569682	3300005343	Switchgrass Rhizosphere	QSFMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALKYNGTLPDKRTPDAPTQRSPRAQTAPQPAAATNGTTAPAAIKP*
Ga0070687_1013410882	3300005343	Switchgrass Rhizosphere	CSKRQPQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALKYNGTLPELTTPDAPTQRTIKPVAQPADQKNNKVNGNGAAPAAVVKP*
Ga0070675_1010153091	3300005354	Miscanthus Rhizosphere	KKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGSDLIDEALRYNGTLPAMTTPDAPTQRTVKPATPAADSKSKSANGNGGSPAAVVKP*
Ga0070673_1003871733	3300005364	Switchgrass Rhizosphere	PNPCSKRQPQSFMGNLMQQVSGKADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPALTTPDAPTQRTVKPAATPASDSKSKSVNGNGAAPSAVVKP*
Ga0070673_1011389692	3300005364	Switchgrass Rhizosphere	PNRCSKRQQQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGSDLIDEALRYNGTLPVLTTPVAPTQRTITPDPKTRNATSGAAPTASTPAPTPAAIKP*
Ga0070659_1008014551	3300005366	Corn Rhizosphere	EKSAQNPCGKRTQQSFMGNLMQQVSGRADVTTNKDGILISKDGKDGSDLIDEALKYNGQLPARTTPDAPTNRTPRNTAPAADPKTRNATSGAAPAAASTPTPAPAAIKP*
Ga0070701_106181282	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	RQPQSFMGNLMQQVSGKADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPVMTTPDAPTQRTVKPATPAADSKSKSANGNGGAPAAVVKP*
Ga0070705_1007436491	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	DKGTPNRCSKRQPQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGSDLIDEALRYNGTLPALTTPVAPTQRTISPADPKTRNATSGAAPTASTPSPTPAVIKP*
Ga0070694_1008569531	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	SAPNPCSKRREQSFMGNLMQQVSGRADVTINKNGILISKEGKEGTDLIDEALRYNGTLPASTTPDAPTQRSIPKTTPAADPKTRNATSGAAPTASTPAPSPAVIKP*
Ga0070685_111912561	3300005466	Switchgrass Rhizosphere	GAPIPEKSTPNPCAKKTQQSFVGNLMQQVSGKADVTVNKNGILISKDGKEGTDLIDEALKYNGSLPAQTTPDAPTQRTVKPAPAVDSKGKNNNGNGAAAVAKP*
Ga0068853_1001428251	3300005539	Corn Rhizosphere	IGAPIPEKSTPNPCSSKKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGTDLIDEALRYNGSLPELTTPDAPTQRTPAKTAVPAAADPKNKSANGNGASPAAAIKP*
Ga0068853_1015779981	3300005539	Corn Rhizosphere	RQPQSFMGNLMQQVSGRADITVNKNGILISKDGKEGTDLIDEALRYNGTLPELTTPDAPTQRTIKPATSPADQKSKSGANGNGAPAAVVKP*
Ga0070695_1001663593	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MGNLMQQVSGKADVTINKNGILISKDGKEGTDLIDEALRYNGSLPELTTPDAPTQRTPAKTAVPAAADPKNKSANGNGASPAAAIKP*
Ga0070695_1011395591	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	NPCSKRQPQSFMGNLMQQVSGKADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPALTTPDAPTQRTVKPAATPASDSKSKSVNGNGAAPSAVVKP*
Ga0070696_1004634481	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	NPCSKRQPQSFVGNLLQQVSGKADVTTNKNGILISKEGKEGKDLIDEALRYNGTLPELTTPEAPTQRSKPAGAQPSASTSSPAPAAIKP*
Ga0068857_1025331952	3300005577	Corn Rhizosphere	KKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGSDLIDEALRYNGTLPALTTPDAPTQRTVKPAATPAADSKSKSANGNGGAPAAVVKP*
Ga0068854_1002939931	3300005578	Corn Rhizosphere	APNPCSAKKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGSDLIDEALRYNGTLPVMTTPDAPTQRTVKPATPAADSKSKSANGNGGAPAAVVKP*
Ga0068852_1013172701	3300005616	Corn Rhizosphere	IPEKSTPNPCSSKKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGTDLIDEALRYNGSLPELTTPDAPTQRTPAKTAVPAAADPKNKSANGNGASPAAAIKP*
Ga0068864_1008740732	3300005618	Switchgrass Rhizosphere	EKSTPNPCAKKTQQSFVGNLMQQVSGKADVTVNKNGILISKDGKEGTDLIDEALKYNGSLPAQTTPDAPTQRTVKPTPAVDSKGKNSNGNGAAAVAKP*
Ga0068864_1019217582	3300005618	Switchgrass Rhizosphere	MGNLMQQVSGKADVTTNKNGILISKDGKEGTDLIDEALRYNGTLPVMTTPDAPTQRTVKPATPAADSKSKSANGNGGAPAAVVKP*
Ga0068861_1015323712	3300005719	Switchgrass Rhizosphere	QQVSGKADVTTNKNGILISKEGKEGKDLIDEALRYNGTLPELTTPEAPTQRSKPAGAQPSASTSSPAPAAIKP*
Ga0068861_1025843561	3300005719	Switchgrass Rhizosphere	NPCSKRQPQSFMGNLMQQVSGKADVTVNKNGILISKDGKEGSDLIDEALRYNGTLPALTTPDAPTQRSPKPATPSDAKSKSGANGNGNAPAAVVKP*
Ga0068863_1017244342	3300005841	Switchgrass Rhizosphere	CSKRQQQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALKYNGTLPELTTPDAPTQRTVKPVAQPQPSDQKTKSVNGTGAAPAAVVKP*
Ga0068862_1007286053	3300005844	Switchgrass Rhizosphere	CSKRQQQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGSDLIDEALRYNGTLPALTTPDAPTQRSPKPATPSDAKSKSGANGNGNAPAAVVKP*
Ga0075285_10384572	3300005890	Rice Paddy Soil	SMPNRCSKRQPQSFMGNLMQQVSGRADITVNKNGILISKDGKEGTDLIDEALRYNGTLPELTTPAAPTQRTVKPVAQPSDQKTKSANGNGAAPAAVVKP*
Ga0082029_10797382	3300006169	Termite Nest	QSFMGNLMQQVSGRADVTTNKNGILISKDGKEGTDLIDEALRYNGALPALSTPEAPEQRSPKPAPVPSDSKSKNATNGASPAPAVDKP*
Ga0079220_115887162	3300006806	Agricultural Soil	SKRTPQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALKYNGQLPDKRTPDAPTQRSPRAQAPVTPSATNGTAAPAAIKP*
Ga0075431_1008158891	3300006847	Populus Rhizosphere	KSTPNPCSKRQPQSFMGNLLQQVSGKADVTTNKNGILISKEGKEGKDLIDEALRYNGTLPELTTPEAPTQRSKPAGAQPSASTSSPAPAAIKP*
Ga0075433_103767443	3300006852	Populus Rhizosphere	QLNIIGAPIPEKSTPNPCSKRQQQSFMGNLLQQVSGKADVTVNKNGILISKDGKEGNDLIDEALRYNGTLPASSTPEAPVNRSAKPAQQTVDPKTRTNNGGATAPAAATTVPPAVIKP*
Ga0079219_100889121	3300006954	Agricultural Soil	SFMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALKYNGQLPDKRTPDAPTQRSPRAATPVTPAASNNGTAAPAAIKP*
Ga0105240_112783941	3300009093	Corn Rhizosphere	QPQSFMGNLMQQVSGKADVTINKNGILISKDGKEGTDLIDEALRYNGTLPVLTTPDAPTQRTVKPAATPASDSKSKSVNGNGGAPAAVVKP*
Ga0111539_132376871	3300009094	Populus Rhizosphere	SFVGNLLQQVSGKADVTTNKNGILISKEGKEGKDLIDEALRYNGTLPELTTPEAPTQRSKPAGAQPSASTSSPAPATIKP*
Ga0114129_117460091	3300009147	Populus Rhizosphere	RQPQSFMGNLMQQVSGKADVTVNRNGILISKDGKEGTDLIDEALRYNGTLPEMTTPDAPTQRNPKATTPAADPKSKNANSVAPAAVVKP*
Ga0105243_126708101	3300009148	Miscanthus Rhizosphere	RQPQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGSDLIDEALRYNGTLPALTTPDAPTQRSPKPATPSDAKSKSGANGNGNAPATVVKP*
Ga0075423_114946932	3300009162	Populus Rhizosphere	IGAPIPEKAAPSPCSKREPQSFMGNLMQQVSGRADVTVDKNGILISKDGKEGTDLIDEALKYNGTLPEKRTPDAPTNRSPRASTPPAPPSAATNGGTTAPAAIKP*
Ga0105248_131584922	3300009177	Switchgrass Rhizosphere	QSFVGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALKYNGTLPALTTPDAPTQRTVKPVAPAADPKTRNATSGAAPTASTPAPTPAVIKP*
Ga0105249_127151661	3300009553	Switchgrass Rhizosphere	SFMGNLMQQVSGRADVTVNKNGILISKDGKEGSDLIDEALRYNGTLPALTTPDAPTQRSPKPATPSDAKSKSGANGNGNAPAAVVKP*
Ga0126307_103610621	3300009789	Serpentine Soil	SAPNPCSKRQPQSFMGNLMQQVSGKADITVNKSGILISKDGKEGSDLIDEALRYNGTLPALTTPDAPTQRTTKPVTPPSNPKDKSANGNGAAPAAVVKP*
Ga0126308_104426022	3300010040	Serpentine Soil	MGNLLQQVSGKADITVNKNGILISKDGKDGSDLIDEALRYNGTLPALTTPDAPTQRSPKATPQPDSKTNGAAPAVVVKP*
Ga0126384_120190922	3300010046	Tropical Forest Soil	PEKSMPNPCSKRQPQSFMGNLMQQVSGKADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPALTTPDAPTQRTVKPVAAPAADSKSKSANGNGAAPAAVVKP*
Ga0126382_120554061	3300010047	Tropical Forest Soil	PQSFMGNLMQQVSGKADVTINKNGILISKDGKEGTDLIDEALRYNGSLPEMTTPDAPTQRTPTKTVAPAAADPKNKSANGNGASPAAAIKP*
Ga0126377_135999572	3300010362	Tropical Forest Soil	GNLMQQVSGKADVTVNKNGILISKDGKEGNDLIDEALRYNGTLPASSTPDAPVNRSPKPAQQTVDPKTRTNNGGAAVPAATTTVPPAIIKP*
Ga0134128_107520513	3300010373	Terrestrial Soil	QSFMGNLMQQVSGKADVTTNKNGILISKDGKEGTDLIDEALRYNGSLPELTTPDAPTQRTPKPTTPATDTKSKNANANGVSPAAAIKP*
Ga0134124_105280641	3300010397	Terrestrial Soil	KSAPNPCSKKQPQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPALTTPDAPTQRGIKPATPASDTKSKNGVNGNGGAPAAVVKP*
Ga0134127_110690692	3300010399	Terrestrial Soil	KQPQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPALTTPDAPTQRGIKPAAAPASDSKSKSGVNGNGGAPAAVVKP*
Ga0134127_122190552	3300010399	Terrestrial Soil	QVSGRADVTVNKNGILISKDGKEGTDLIDEALKYNGTLPDKRTPDAPTQRSPRAQTAPQPAAATNGTTAPAAIKP*
Ga0134127_128625962	3300010399	Terrestrial Soil	LMQQVSGRADVTVNKNGILISKEGKEGSDLIDEAMRYNGTLPALTTPDAPTQRSIPKAPAADPKTRNATSGAAPTASTPAPSPAVIKP*
Ga0134122_105801982	3300010400	Terrestrial Soil	NIIGAPIPDKGTPNRCSKRQPQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGSDLIDEALRYNGTLPALTTPVAPTQRTISPADPKTRNATSGAAPTASTPSPTPAVIKP*
Ga0134122_110114122	3300010400	Terrestrial Soil	FMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPELTTPDAPTQRTVKPVAAPAPDQKTKVNGNGAPAAVVKP*
Ga0105246_112384492	3300011119	Miscanthus Rhizosphere	DKSAPNPCSKKQQQSFMGNLMQQVSGRADVTVNKNGILISKEGKEGSDLIDEALRYNGTLPALTTPDAPTQRSIPKAPAADPKTRNATSGAAPTASTPAPSPAVIKP*
Ga0127502_108240331	3300011333	Soil	IIGAPIPEKSMQNPCSKRQEQSFMGNLMQQVSGKANVTVTKDGILISKDGKEGTDLIDEALKYNGQLPARSTPDAPTNRSPRTTPAATDPKTRTNTNGAAPAAANTPTPVPAAIKP*
Ga0150984_1073887831	3300012469	Avena Fatua Rhizosphere	QVSGRADVTVNKSGILISKDGKEGTDLIDEALRYNGTLPELTTPDAPTQRTVKPAQPSDQKTKNVTGNGAAPAAVAKP*
Ga0157369_124624612	3300013105	Corn Rhizosphere	GAPIPEKSMPNPCSKRQPQSFMGNLMQQVSGRADITVNKNGILISKDGKEGTDLIDEALRYNGTLPELTTPDAPTQRTIKPATSPADHKSKSGANGNGAPAAVVKP*
Ga0163162_125194611	3300013306	Switchgrass Rhizosphere	KKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGSDLIDEALRYNGTLPALTTPDAPTQRAPKPSTPAAETKGKNANGGGPAAVVKP*
Ga0157375_132202911	3300013308	Miscanthus Rhizosphere	LGIIGAPVPEKSSPNPCSKRQPQSFMGNLMQQVSGRADVTINKNGILISKDGKEGSDLIDEALRYNGTLPVLTTPVAPTQRTITPDPKTRNATSGAAPTASTPSPSPAVIKP*
Ga0157375_133510592	3300013308	Miscanthus Rhizosphere	PEKSAPNPCSAKKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGSDLIDEALRYNGTLPVMTTPDAPTQRTVKPATPAADSKSKSANGNGGAPAAVVKP*
Ga0134078_106069762	3300014157	Grasslands Soil	APNPCAKRESQSFMGNLLQQVSGRADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPASATPEAPTQRTVKPTPAPAVDPKTRNAGNGAVPSSAVIKP*
Ga0075324_11289101	3300014263	Natural And Restored Wetlands	QLNIIGAPIPDKSTPNACSKRQPQSFMGNLMQQVSGRANVTINKNGILISKDSKAGTDLIDEALRYNGALPASTTPEAPTQRSRPAPAAATNGAPSAAVKP*
Ga0157380_101474711	3300014326	Switchgrass Rhizosphere	MGNLMQQVSGRADVTVNKNGILISKEGKEGSDLIDEALRYNGTLPALTTPDAPTQRSIPKAPAADPKTRNATSGAAPTASTPAPSPAVIKP*
Ga0157377_105698751	3300014745	Miscanthus Rhizosphere	PQSFMGNLMQQVSGKADVTVNKNGILISKDGKEGTDLIDEALRYNGSLPELTTPDAPTQRSPKAATPTASDSKNKSANGNGAAPAAVIKP*
Ga0157379_125747791	3300014968	Switchgrass Rhizosphere	KKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGTDLIDEALRYNGTLPALTTPDAPTQRTVKPAATPASDSKSKSVNGNGAAPAAVAKP*
Ga0182007_102211902	3300015262	Rhizosphere	FMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALKYNGTLPDKRTPDAPTQRSPRAQTAPQPAAATNGTTAPAAIKP*
Ga0190274_133694891	3300018476	Soil	NEKAREQLQIIGAPVPDKSAPNPCSKRQPQSFMGNLMQQVSGKADITVNKNGILISKDGKEGSDLIDEALRYNGTLPALTTPDAPTQRAPKPVTPSNPKDKSANGNGAAPAAVVKP
Ga0207697_104678761	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	PIPEKSMPNPCSKRQPQSFMGNLMQQVSGRADITVNKNGILISKDGKEGTDLIDEALRYNGTLPELTTPDAPTQRTIKPATSPADQKSKSGANGNGAPAAVVKP
Ga0207643_109276431	3300025908	Miscanthus Rhizosphere	FMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPELTTPDAPTQRTIKPVAQPADQKQKSANGNGAAPAAVVKP
Ga0207660_111454851	3300025917	Corn Rhizosphere	MQQVSGRADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPELTTPDAPTQRTIKPATSPADQKSKSGANGNGAPAAVVK
Ga0207662_111094572	3300025918	Switchgrass Rhizosphere	IPDKSAPNRCSKRQPQSFMGNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALKYNGTLPELTTPDAPTQRTIKPVAQPADQKNNKVNGNGAAPAAVVKP
Ga0207659_102884141	3300025926	Miscanthus Rhizosphere	IPEKGTPHPCSKRQQQGFVGSLMQQVSGRADVTVNKNGILISKEGKEGTDLIDEALRYNGSLPELTTPDAPTQRTPKPTTPATDTKSKNANANGVSPAAAIKP
Ga0207709_100722314	3300025935	Miscanthus Rhizosphere	AREQLNIIGAPIPEKTVPNPCSKRQPQSFMGNLMQQVSGKADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPVMTTPDAPTQRTVKPATPAADSKSKSANGNGGAPAAVVKP
Ga0207670_113640611	3300025936	Switchgrass Rhizosphere	KSAPNPCSKRQPQSFMGNLMQQVSGKADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPALTTPDAPTQRTVKPAATPASDSKSKSVNGNGAAPAAVVKP
Ga0207669_109547382	3300025937	Miscanthus Rhizosphere	KKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGTDLIDEALRYNGTLPVMTTPDAPTQRTVKPATPAADSKSKSANGNGGAPAAVVKP
Ga0207689_112132962	3300025942	Miscanthus Rhizosphere	PCSTKKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGSDLIDEALRYNGTLPALTTPDAPTQRTVKPAATPAADSKSKSANGNGGAPAAVVKP
Ga0207640_100608045	3300025981	Corn Rhizosphere	PEKTAPNPCSKRQPQSFMGNLMQQVSGKADVTINKNGILISKDGKEGTDLIDEALRYNGTLPALTTPDAPTQRTVKPVATPAADSKSKSANGNGGSPAAVVKP
Ga0207677_108528711	3300026023	Miscanthus Rhizosphere	FMGNLMQQVSGKADVTINKNGILISKDGKEGTDLIDEALRYNGTLPALTTPDAPTQRTVKPVAAPAAESKSKSANGNGGAPAAVVKP
Ga0207677_112468212	3300026023	Miscanthus Rhizosphere	PIPEKSAPNPCSKRQPQSFMGNLMQQVSGRADVTINKNGILISKDGKEGTDLIDEALRYNGTLPALTTPDAPTQRSSPKPATPPADAKSKSGANGNGNAPAAVVKP
Ga0207678_109598762	3300026067	Corn Rhizosphere	KIIGAPIPDKSTPNACSKRQSQSFMSNLMQQVSGRADVTVNKNGILISKDGKEGTDLIDEALRYNGTLPELTTPDAPTQRTVKPVAAPAPDQKTKVNGNGAPAAVVKP
Ga0207674_112891001	3300026116	Corn Rhizosphere	CSKRQPQSFMGNLMQQVSGKADVTINKNGILISKDGKEGTDLIDEALRYNGTLPAMTTPDAPTQRTVKPVTPATDSKSKSANGNGGAPAAVVKP
Ga0207675_1015615022	3300026118	Switchgrass Rhizosphere	QQVSGKADVTTNKNGILISKEGKEGKDLIDEALRYNGTLPELTTPEAPTQRSKPAGAQPSASTSSPAPAAIKP
Ga0207675_1025336281	3300026118	Switchgrass Rhizosphere	NPCSKRPQQSFMGNLIQQVSGRADVTVNKNGILISKDGKEGSDLIDEALRYNGTLPASTTPDAPTQRSIPKTPAADPKTRNATSGAAPTASTPAPSPAVIKP
Ga0209382_120076121	3300027909	Populus Rhizosphere	NIIGAPIPDKSTPNPCSKRQPQSFMSNLMQQVSGRADITVNKNGILISKDGKEGTDLIDEALRYNGTLPALTTPDAPTQRSPKTTPPTDPKIRNATSGAAPTASTPSPSPAVIKP
Ga0268265_112240862	3300028380	Switchgrass Rhizosphere	NLMQQVSGKADVTINKNGILISKDGKEGSDLIDEALRYNGTLPAMTTPDAPTQRTVKPATPAADSKSKSANGNGGSPAAVVKP
Ga0268265_115842121	3300028380	Switchgrass Rhizosphere	KSTPNPCAKKTQQSFVGNLMQQVSGKADVTVNKNGILISKDGKEGTDLIDEALKYNGSLPAQTTPDAPTQRTVKPTPAVDSKGKNSNGNGAAAVAKP
Ga0310813_108343501	3300031716	Soil	CSKRQPQSFMGNLMQQVSGKADVTTNKNGILISKDGKEGTDLIDEALRYNGTLPAMTTPDAPTQRTVKPATPAADSKSKSANGNGGAPAAVVKP
Ga0307406_116891342	3300031901	Rhizosphere	KQQQSFMGNLMQQVSGRADVTVNKNGILISKEGKEGTDLIDEALRYNGTLPALTTPDAPTQRSVPKAPAADPKTRNATSGAAPTASTPAPSPSVIKP
Ga0307416_1031956421	3300032002	Rhizosphere	PEKSMPNPCSKRQPQSFVGNLLQQVSGKADVTTNKNGILISKEGKEGKDLIDEALRYNGTLPELTTPEAPTQRSKPAGAQPSASTSSPAPAAIKP
Ga0310812_104927282	3300032421	Soil	PIPEKSAPNPCSTKKQQSFMGNLMQQVSGKADVTINKNGILISKDGKEGSDMIDEALRYNGTLPALTTPDAPTQRTVKPAATPAADSKSKSANGNGGAPAAVVKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099836

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences