NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F099948

Metagenome Family F099948

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F099948
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 45 residues
Representative Sequence MFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVRE
Number of Associated Samples 3
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 2
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 30.95%    Coil/Unstructured: 69.05%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF12780AAA_8 0.97
PF06417DUF1077 0.97
PF01391Collagen 0.97
PF08385DHC_N1 0.97
PF00238Ribosomal_L14 0.97
PF00112Peptidase_C1 0.97
PF16488ArgoL2 0.97
PF01951Archease 0.97
PF10271Tmp39 0.97
PF08366LLGL 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0093Ribosomal protein L14Translation, ribosomal structure and biogenesis [J] 0.97
COG1371Archease, activates RNA ligation by RtcB (tRNA splicing)Translation, ribosomal structure and biogenesis [J] 0.97

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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Marine Gutless Worms SymbiontHost-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont100.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003817Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius sp. 2 HERON ISLANDHost-AssociatedOpen in IMG/M
3300027557Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius sp. 2 HERON ISLAND (SPAdes)Host-AssociatedOpen in IMG/M
3300027620Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type G CAVOLI (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0056122_1008721513300003817Marine Gutless Worms SymbiontMFRIAGQTAGPIEAKLDTRTHVHPGSVSGKVNVKVIRVCVQD
Ga0056122_1012164113300003817Marine Gutless Worms SymbiontSVCLSVSMFRKAGQTAGPIKTKLDTRTHVYPGSVSGKVNVKVIHVCVWE*
Ga0056122_1013855623300003817Marine Gutless Worms SymbiontMFRMAGQTAGPIETTLDIRTHVHPGSVSGKVNVKVIHVCVRD*Q
Ga0056122_1026052423300003817Marine Gutless Worms SymbiontLFVCLSVSMFRMAGQTAGPIETKLDTRTQVHTGSVSVKVNVKVIHVCVRE*
Ga0209679_100059543300027557Marine Gutless Worms SymbiontMFRMAGQMAGLIETKLDTRTHVHPGSVSGKVNVKVIHVYMRD
Ga0209679_100216343300027557Marine Gutless Worms SymbiontMFRMAGQTAEPLETKLETRTHVHPGSVSVKVNVKVIHVCVRE
Ga0209679_100410413300027557Marine Gutless Worms SymbiontMAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVRE
Ga0209679_100602133300027557Marine Gutless Worms SymbiontMFVCLSVSMFCMAGQTAGPIETKLVTRTHVHPGSVSVKVNVKVIHVCVRE
Ga0209679_100609063300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDRRTYVHAGSVSVKVNVKVIHVCVRE
Ga0209679_100742013300027557Marine Gutless Worms SymbiontMFRMAAGQTAGPIDTKLHTRTHVHPGSVSGKVNVKVIHVCV
Ga0209679_100742163300027557Marine Gutless Worms SymbiontMFVCLSVSMFRMAGQTAGPIETKLDTCQLDTRTHVHPGSVSVKVNVKVIHVCVLE
Ga0209679_100808553300027557Marine Gutless Worms SymbiontMFVSMFRMAGQTAEPIETKLDTRTHVHPGSVSVKVNVKVIHVCMRD
Ga0209679_100879263300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVRE
Ga0209679_101099663300027557Marine Gutless Worms SymbiontMFCIAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHV
Ga0209679_101366343300027557Marine Gutless Worms SymbiontMFCMAGQTAGPIETKLDTRTRVHPGSVSVKVNVKVIHVCVREXQNYETPGG
Ga0209679_101426113300027557Marine Gutless Worms SymbiontMFVCLFRIAGQTAAPIETKLDTRTHVHPGSVSGKVNVKVIHVCLRE
Ga0209679_101491553300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCV
Ga0209679_101689743300027557Marine Gutless Worms SymbiontMFVCLSVSMLSMAGQTAGPIETKLDTRTHVHPGSVSVKVNVKVIHVC
Ga0209679_101940213300027557Marine Gutless Worms SymbiontMAGQTAGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVRE
Ga0209679_102136973300027557Marine Gutless Worms SymbiontMNLYNKRCYVCLSVSMFRMAGQTAGPIETKLDTRTRVHPGSVSVKVNVKVIHV
Ga0209679_102357213300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIDTKLHTRTHVHPGSVSGKVNVKVIHVCVRDXQKYET
Ga0209679_102563813300027557Marine Gutless Worms SymbiontMFRVAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVC
Ga0209679_102675423300027557Marine Gutless Worms SymbiontMFRMAGQRAGPIETKLDTRTHVHPGSVSVEVNVKVIHVCVRE
Ga0209679_102876053300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVYTGSVSVKVNVKVIHVCVRE
Ga0209679_102997843300027557Marine Gutless Worms SymbiontMFRMAGQMAGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVREXQNYETP
Ga0209679_103137813300027557Marine Gutless Worms SymbiontMFRMAGQTAGPMETKLDTRTHVYPGSVSVKVNVKVIHVCVRE
Ga0209679_103318213300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTSTHVHPGSVSVKVNAKVIHVCVREXQNYETP
Ga0209679_103611213300027557Marine Gutless Worms SymbiontMFGCLSVSMFRTAGQTAGLIETKLDTRTHVHPGSVFVKVNVKVIHVCVRE
Ga0209679_103988513300027557Marine Gutless Worms SymbiontMFRMAGQTSGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVR
Ga0209679_104281323300027557Marine Gutless Worms SymbiontMFVCLSVSMFRMAGETAGPIETKLDTCTHVHPVSVSVKVNVKVIHVCVRE
Ga0209679_104282763300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVRE
Ga0209679_104487713300027557Marine Gutless Worms SymbiontMFVCLFVCLSVSIFRMAGQTAGPIETKLDTRTYVHPGSVSGKVNVKVIHVCVRD
Ga0209679_104518533300027557Marine Gutless Worms SymbiontMFVCLSVYICLSVSVFRMAGQTAGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVRE
Ga0209679_104973613300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETILDTRTHVHPGSVSVKVNVKVIHVCVRE
Ga0209679_105214923300027557Marine Gutless Worms SymbiontMFVCLFVCLSVSICSVWPAGQTAGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVRD
Ga0209679_105873413300027557Marine Gutless Worms SymbiontMLVCLSVSMFRMAGQTAGLIETKLDTRTHVHPGSVSVKVNVKVIHV
Ga0209679_105916123300027557Marine Gutless Worms SymbiontMFCMAGQTAGLIENKLDKHTHVHPGSVSVKVNVKVIHVYVRE
Ga0209679_105921513300027557Marine Gutless Worms SymbiontFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVWE
Ga0209679_106056813300027557Marine Gutless Worms SymbiontMFVCLSVCLFRMAGQTAGPIETKLDTRTHVHTGSVSGKVNVKVIHVCVRD
Ga0209679_106376133300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKFETRTHVHPGSVSVKVHVKVIH
Ga0209679_106494923300027557Marine Gutless Worms SymbiontMFVCLFVYLFVCLFRMAGQTAAPIETKLDTRTYVHPGSVSGKVNVKVIHVCLRE
Ga0209679_106498023300027557Marine Gutless Worms SymbiontVSVCLSVCLFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHV
Ga0209679_107676913300027557Marine Gutless Worms SymbiontMFVSMFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVR
Ga0209679_107731423300027557Marine Gutless Worms SymbiontMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVC
Ga0209679_108100523300027557Marine Gutless Worms SymbiontMFRMAGQTTGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVREXQNYE
Ga0209679_108326813300027557Marine Gutless Worms SymbiontMFVCLSVCLFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVRD
Ga0209679_108482333300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVRVRD
Ga0209679_109375113300027557Marine Gutless Worms SymbiontMFVCLSVSMFRMAGQTAGLIETKLDTRTHVHLGSVSVKVNVKVIHVCVRE
Ga0209679_109795513300027557Marine Gutless Worms SymbiontMFRMADQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVRDXQKY
Ga0209679_109894313300027557Marine Gutless Worms SymbiontMFVCLFVCLSVCLFRMAGQTAGPIETKLDTRTHVHSGSVYGKVNVKVIHV
Ga0209679_110125623300027557Marine Gutless Worms SymbiontMFRIAGQMAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCLREXQKYETP
Ga0209679_110292713300027557Marine Gutless Worms SymbiontMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVR
Ga0209679_110855713300027557Marine Gutless Worms SymbiontMAGQTAGPIETKVDTRTHVHPGSVSVKVNVKVIHVCVREXQNYETPGKLRES
Ga0209679_111019813300027557Marine Gutless Worms SymbiontMFRMAGQTAEPIETKLDTRTHVHPGSVSGKVNVKVIH
Ga0209679_111250333300027557Marine Gutless Worms SymbiontMFVCLFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCLR
Ga0209679_111293123300027557Marine Gutless Worms SymbiontMFCMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVRDXQ
Ga0209679_111508623300027557Marine Gutless Worms SymbiontMFRMAGQTAEPIETKLDTRTHVKVNVKVIHVCVREXQNYETPGTLRES
Ga0209679_111519443300027557Marine Gutless Worms SymbiontMFRMAMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVRDXQK
Ga0209679_111734423300027557Marine Gutless Worms SymbiontMFRMADQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVC
Ga0209679_111742613300027557Marine Gutless Worms SymbiontMFVCLSVSVFSMAGQTAGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVRE
Ga0209679_112409213300027557Marine Gutless Worms SymbiontMFRMVGETAGPIETKLDTRTHVHPGSVSGKVNVKVIH
Ga0209679_112622713300027557Marine Gutless Worms SymbiontMAGQTAGPIDTKLDTRTHVHPGSVSGKVNVKVIHV
Ga0209679_114022413300027557Marine Gutless Worms SymbiontMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVRD
Ga0209679_114203713300027557Marine Gutless Worms SymbiontMFRVAGQTAGPIETKLDTRTHAHPGSVSVMVNVKVIHVCV
Ga0209679_114955623300027557Marine Gutless Worms SymbiontMFRTAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVRDXQK
Ga0209679_115436823300027557Marine Gutless Worms SymbiontMAGPMETKLDTRTHVHPGSVSVKVNVKVIHVCVREXQNYETP
Ga0209679_115549313300027557Marine Gutless Worms SymbiontMFRMEGQMAGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVREXQNYE
Ga0209679_115628913300027557Marine Gutless Worms SymbiontIMKGDMFVCLSQSMFRMAGQTVGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVRD
Ga0209679_115769513300027557Marine Gutless Worms SymbiontMFVCLSVCLFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCLRVT
Ga0209679_116707313300027557Marine Gutless Worms SymbiontMFVCLSVCLSVSMFRMAGQTAGPIETKLDTRTHVHTGSVSVKVNVKVIHVCVRE
Ga0209679_116844113300027557Marine Gutless Worms SymbiontMAGETAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCV
Ga0209679_117163013300027557Marine Gutless Worms SymbiontMAGQTAGPIDTELDTRTHAHPGSVSGKVNVKVIHVCVREXQKTR
Ga0209679_117638613300027557Marine Gutless Worms SymbiontMFVCLSVSMFRMAGQTAGPIETKLDTRTHVHPGNVSGKVNVKVIHVCVRE
Ga0209679_118448113300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVREXQNYETPG
Ga0209679_118633813300027557Marine Gutless Worms SymbiontMFVCLSVSMFRMAGQTAGPIETRLDTRTHVHPGSVSVKVNVKVIHVCVREXQNYE
Ga0209679_119700113300027557Marine Gutless Worms SymbiontMFRMAGQTTGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVREXQNYET
Ga0209679_119712923300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVRD
Ga0209679_119734213300027557Marine Gutless Worms SymbiontMFRIAGQTAGPMETKLDTRTHVHPGSVSGKVNVKVIHVC
Ga0209679_119802713300027557Marine Gutless Worms SymbiontMFVCLSVCLFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVR
Ga0209679_120426533300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPVSVSGKVNVKVIHVCLRE
Ga0209679_120483823300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPGSVSVNVKVIHVCVWEXQNYETP
Ga0209679_120572513300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVRDXQKYETPAKRH
Ga0209679_120754413300027557Marine Gutless Worms SymbiontMAGQTAGPIETKLDTRTRVHPGSVSGKVNVKVIHVCLR
Ga0209679_121003813300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKFDTRTHVHPGSVSGKVNVKVIHVCVRD
Ga0209679_121021023300027557Marine Gutless Worms SymbiontMFVCLSVSKFRMAGQTAGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVRE
Ga0209679_121428313300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVREXQN
Ga0209679_121885213300027557Marine Gutless Worms SymbiontMFRMAGQTVGPIETKLDTRTHVHPGSVSVKVNVKVIHVCV
Ga0209679_122163213300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPVSVSVKVNVKVIHVCVREXQNYETPG
Ga0209679_122180523300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPGSVSVKVNVKVIHVCV
Ga0209679_122535123300027557Marine Gutless Worms SymbiontVFVCLSVCLFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVK
Ga0209679_122635113300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVYPGSVSGKVNVKVIHVCVRDXQKYEIPA
Ga0209679_122636213300027557Marine Gutless Worms SymbiontMFVCLSVCLFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCL
Ga0209679_123544423300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCGR
Ga0209679_124862023300027557Marine Gutless Worms SymbiontMFRIAGQTAGPIETKLDIRTHVHPGSVSGKVNVKVIHVCA
Ga0209679_125253613300027557Marine Gutless Worms SymbiontMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCVRE
Ga0209679_125695813300027557Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLHTRTHVHPGSVSVKVNVKVIHVCVREXQNYETPGTL
Ga0209679_127206713300027557Marine Gutless Worms SymbiontMFRMAGQTAGLIETKLDTRTHVHPGSVSGKVNVNVIHVC
Ga0209679_128134613300027557Marine Gutless Worms SymbiontRMSGQTAGPIETKLDTRTHVHSGSVSGKVNVKVIHVCVRD
Ga0209679_128349613300027557Marine Gutless Worms SymbiontMAGQTAGPIETKLDTRTHVHPGSVSGKVNVKVIHVCLREXQKYETP
Ga0209679_129902913300027557Marine Gutless Worms SymbiontMAGQTAGPIETKLDTRTYVHPGSVSGKVNVKVIHVCV
Ga0209679_130455513300027557Marine Gutless Worms SymbiontMFVSMFRMAGQTAGPIETKLVTRTHVNPGSVSVKVNVKVIHVCVREXQNYETPGK
Ga0209679_130786713300027557Marine Gutless Worms SymbiontMSMAGQTAGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVRE
Ga0209260_1005946213300027620Marine Gutless Worms SymbiontMFRMAGQTAGPIETKLDTRTHVHPGSVSVKVNVKVIHVCVREXQNYETP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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