Metagenome / Metatranscriptome Family F100015

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100015
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	133 residues
Representative Sequence	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Number of Associated Samples	96
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.70 %
% of genes near scaffold ends (potentially truncated)	36.89 %
% of genes from short scaffolds (< 2000 bps)	87.38 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (18.447 % of family members)
Environment Ontology (ENVO)	Unclassified (32.039 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (32.039 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.94% β-sheet: 0.00% Coil/Unstructured: 46.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00248	Aldo_ket_red	21.36
PF07238	PilZ	7.77
PF00118	Cpn60_TCP1	0.97
PF00106	adh_short	0.97
PF01077	NIR_SIR	0.97
PF02321	OEP	0.97
PF00355	Rieske	0.97
PF00144	Beta-lactamase	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.94
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.97
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.97
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.42 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	73.79 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	19.42 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	19.42 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	19.42 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.79 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	19.42 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.79 %
unclassified Sorangiineae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae	19.42 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.79 %
Sorangiineae bacterium NIC37A_2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	19.42 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105051977	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	836	Open in IMG/M
3300001431\|F14TB_103730435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300004157\|Ga0062590_100625037	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	952	Open in IMG/M
3300005332\|Ga0066388_103888403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300005353\|Ga0070669_100317515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1257	Open in IMG/M
3300005441\|Ga0070700_101197476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300005444\|Ga0070694_101242271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300005459\|Ga0068867_101853150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300005471\|Ga0070698_100719335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300005543\|Ga0070672_102147815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300005544\|Ga0070686_101364619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300005836\|Ga0074470_10569569	All Organisms → cellular organisms → Bacteria	3889	Open in IMG/M
3300005842\|Ga0068858_102346066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300006845\|Ga0075421_101887939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300006852\|Ga0075433_10518648	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	1048	Open in IMG/M
3300006871\|Ga0075434_100430643	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	1340	Open in IMG/M
3300006904\|Ga0075424_101436700	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	732	Open in IMG/M
3300006904\|Ga0075424_102008230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300006904\|Ga0075424_102730128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300007004\|Ga0079218_11452908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300009094\|Ga0111539_10246657	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	2079	Open in IMG/M
3300009147\|Ga0114129_10508754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1572	Open in IMG/M
3300009176\|Ga0105242_12198731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300009177\|Ga0105248_10847624	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	1032	Open in IMG/M
3300009553\|Ga0105249_10626113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	1132	Open in IMG/M
3300009610\|Ga0105340_1024354	All Organisms → cellular organisms → Bacteria	2355	Open in IMG/M
3300009800\|Ga0105069_1055962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300010047\|Ga0126382_12072272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300010401\|Ga0134121_11720305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300010403\|Ga0134123_10729246	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	973	Open in IMG/M
3300011415\|Ga0137325_1043420	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	944	Open in IMG/M
3300011429\|Ga0137455_1242496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300011432\|Ga0137428_1061891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300011437\|Ga0137429_1261265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300011441\|Ga0137452_1139661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300012038\|Ga0137431_1140518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300012676\|Ga0137341_1087171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300012901\|Ga0157288_10309003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300013306\|Ga0163162_10508969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1334	Open in IMG/M
3300013308\|Ga0157375_12114043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300014262\|Ga0075301_1035787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300014326\|Ga0157380_12771432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300014875\|Ga0180083_1049184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300015077\|Ga0173483_10589865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300015259\|Ga0180085_1012824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2293	Open in IMG/M
3300015259\|Ga0180085_1238588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300015371\|Ga0132258_11278714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1854	Open in IMG/M
3300015373\|Ga0132257_101220697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300018031\|Ga0184634_10438513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300018053\|Ga0184626_10418514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300018063\|Ga0184637_10038500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2904	Open in IMG/M
3300018072\|Ga0184635_10218971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300018074\|Ga0184640_10097147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1278	Open in IMG/M
3300018077\|Ga0184633_10011820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4176	Open in IMG/M
3300018079\|Ga0184627_10097553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1550	Open in IMG/M
3300018082\|Ga0184639_10004174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6581	Open in IMG/M
3300018083\|Ga0184628_10060483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1918	Open in IMG/M
3300018469\|Ga0190270_10219645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	1625	Open in IMG/M
3300018476\|Ga0190274_11869753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300019229\|Ga0180116_1124826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300019238\|Ga0180112_1272592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	758	Open in IMG/M
3300019458\|Ga0187892_10001957	All Organisms → cellular organisms → Bacteria	44145	Open in IMG/M
3300019458\|Ga0187892_10054624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2716	Open in IMG/M
3300019487\|Ga0187893_10003650	All Organisms → cellular organisms → Bacteria	30679	Open in IMG/M
3300019487\|Ga0187893_10004201	All Organisms → cellular organisms → Bacteria	27807	Open in IMG/M
3300019487\|Ga0187893_10436368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300020063\|Ga0180118_1167850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1057	Open in IMG/M
3300020063\|Ga0180118_1183598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1220	Open in IMG/M
3300020067\|Ga0180109_1192599	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	780	Open in IMG/M
3300020068\|Ga0184649_1360522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300020186\|Ga0163153_10271246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300020193\|Ga0194131_10029827	All Organisms → cellular organisms → Bacteria	4542	Open in IMG/M
3300020195\|Ga0163150_10007700	All Organisms → cellular organisms → Bacteria	12549	Open in IMG/M
3300025327\|Ga0209751_10599178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300025558\|Ga0210139_1081244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300025923\|Ga0207681_10841450	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	767	Open in IMG/M
3300025934\|Ga0207686_10710198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300026075\|Ga0207708_11154009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300027907\|Ga0207428_10668849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300028380\|Ga0268265_10386846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1289	Open in IMG/M
3300031740\|Ga0307468_100767308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300031834\|Ga0315290_10351133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1292	Open in IMG/M
3300031854\|Ga0310904_10091025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1650	Open in IMG/M
3300031908\|Ga0310900_10914229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300032003\|Ga0310897_10243945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	802	Open in IMG/M
3300032013\|Ga0310906_10308881	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	1013	Open in IMG/M
3300032017\|Ga0310899_10293188	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	753	Open in IMG/M
3300032174\|Ga0307470_11142970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300032179\|Ga0310889_10128243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300032211\|Ga0310896_10478654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300034479\|Ga0314785_022238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300034643\|Ga0370545_079395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300034661\|Ga0314782_072670	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	731	Open in IMG/M
3300034662\|Ga0314783_038056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300034665\|Ga0314787_016475	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	1017	Open in IMG/M
3300034666\|Ga0314788_053747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300034668\|Ga0314793_043070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300034669\|Ga0314794_099672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300034670\|Ga0314795_079330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300034672\|Ga0314797_116458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300034675\|Ga0314800_025050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300034676\|Ga0314801_019149	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	1151	Open in IMG/M
3300034678\|Ga0314803_034130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.70%
Host-Associated	Host-Associated	23.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	45.63%
Aquatic	Environmental → Aquatic	31.07%
Plants	Host-Associated → Plants	23.30%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.78%
Sediment	Environmental → Aquatic → Sediment	20.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.48%
Freshwater	Environmental → Aquatic → Freshwater	9.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.83%
Cave	Environmental → Terrestrial → Cave	4.85%
Marine	Environmental → Aquatic → Marine	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	20.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.56%
Loam	Environmental → Terrestrial → Soil → Loam	7.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	4.85%
Lake	Environmental → Aquatic → Freshwater → Lake	3.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.97%
Sand	Environmental → Terrestrial → Soil → Sand	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	20.39%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	18.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.85%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	4.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.97%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.97%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	18.45%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	10.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	2.91%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.94%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	1.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.94%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.97%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.97%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.97%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009800	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012676	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT433_2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019238	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300020193	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025558	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034479	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034665	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034666	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034669	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034670	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034672	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034675	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1050519772	3300000364	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTELKSTYDPALKSQYVDKVVVELLTRSLQDFEKKVEANLEGIEKICTKGGKWFSFYLGRAVEKEFSAQPSPERPADVQKFEAKREPTQLTIRNSSLAKKARV*
F14TB_1037304352	3300001431	Soil	MQNKKLTEEEVQQFMQGCEDLMRLGNQFTTSIRQAVTELKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEIIEKICTKGGKWFSFYLGRAVEKEFSEEPSPEQPGDVQKFEPKREPSQLTIRHPLAKKARG*
Ga0062590_1006250372	3300004157	Soil	MQNKKLTEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIERDFSGQDSPEQPAEVQKFEPKREPTQLTLRHPLAKKARG*
Ga0066388_1038884032	3300005332	Tropical Forest Soil	MQNQKLTEDEVQKFMQGCEDLMRLGNKFTMNIRQAVTDLKGTYDPVLKSQYVEKAVVELLTRSLQDFERKVESSLEGIDKVCTKGGKWFSFYLGRAMEKELSSQPDLLSRPAESKMAEGNEHGHRPFAKKAGS*
Ga0070669_1003175152	3300005353	Switchgrass Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIERDFSGQDSPEQPAEVQKFEPKREPTQLTLRHPLAKKARG*
Ga0070700_1011974761	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	FMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYLDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG*
Ga0070694_1012422712	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVSDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAVEKEFSEEPSPEQPAEVVQKFEPKREPSQLTIRHPLAKKARG*
Ga0068867_1018531501	3300005459	Miscanthus Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKSTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDFPEQPADVQKFEPKREPTQLTLR
Ga0070698_1007193352	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMLLGNKFTTSIRQALTDLKRTYDPVLKSQYTDKAVVELLTRSLQDFEKKLDANLEGIDKICTKGGKWFSYYLGRVVEKELSGEAPQGNHSPEAPKRESSREPTQLIRTRPLVKKAGG*
Ga0070672_1021478152	3300005543	Miscanthus Rhizosphere	LGNKFTSSIRQAVTDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICSKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG*
Ga0070686_1013646191	3300005544	Switchgrass Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVMDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPTDVQQFEPKREPTQFTLRHPLAKKA
Ga0074470_105695693	3300005836	Sediment (Intertidal)	MQNKKLSEDEVQKFMQGCEDLMRLGNQFTTSIRQAISDLKGTYDPALKSQYVDPVVVELLTRSLQDFEKKVEANLEGIEKICTKGGKWFSFYLGRAIETEFSGQPPLERPAEVQKFEAKREPTQITFRQPLPQKARG*
Ga0068858_1023460662	3300005842	Switchgrass Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVMDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPL
Ga0075421_1018879391	3300006845	Populus Rhizosphere	PRVLPWVKGVSMQSKKLSEEEVQKFMQGCEDLMLLGNKFTTSIREAVIELKSTYDPALKSQYVDKVVVELLTRSLQDFEKKVEANLDGIEKICTKGGKWFSFYLGRAVEKEYPGQLPTERPADVQTLEPKREPTQLTIHQSPLVKKARG*
Ga0075433_105186482	3300006852	Populus Rhizosphere	DEVQKFMQGCEDLMRLGNKFTMNIRQAVTDLKGTYDPVLKSQYVEKAVVELLTRSLQDFERKVESSLEGIDKICTKGGKWFSFYLGRAMEKEMAGQPDLTSRPAEIKMADGNEPEHLSLGSRPFAKKAGS*
Ga0075434_1004306432	3300006871	Populus Rhizosphere	MQNQRLTEDEVQKFMQGCEDLMRLGNKFTMNIRQAVTDLKGTYDPVLKSQYVEKAVVELLTRSLQDFERKVESSLEGIDKICTKGGKWFSFYLGRAMEKEMAGQPDLTSRPAEIKMADGNEPEHLSLGSRPFAKKAGS*
Ga0075424_1014367001	3300006904	Populus Rhizosphere	NKFTMNIRQAVTDLKGTYDPVLKSQYVEKAVVELLTRSLQDFERKVESSLEGIDKICTKGGKWFSFYLGRAMEKEMAGQPDLTSRPAEIKMADGNEPEHLSLGSRPFAKKAGS*
Ga0075424_1020082301	3300006904	Populus Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMLLGNKFTTSIRQAVTDLKRTYDPVLKSQYTDKALVELLTRSLQDFEKKLEANLEGIDKICTKGGKWFSYYLGRVVEKELSEPAHQGSPSPEAPNRECSREPTQLIRTRPFVKKAGG*
Ga0075424_1027301282	3300006904	Populus Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAIEKEFSGQDSPEPPADVQRFEPK
Ga0079218_114529081	3300007004	Agricultural Soil	MQNKKLSEDEVQKFMQGCEDLMLLGTKFTTSIRQAVIDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKVEANLEGIEKICTKGGKWFSFYLGRAVEKEFPGQAPSELPADVQKFETKREPTQLT
Ga0111539_102466572	3300009094	Populus Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAIEKEFSGQDSPEPPADVQRFEPKREPTQLTIHHPLAKKARG*
Ga0114129_105087542	3300009147	Populus Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG*
Ga0105242_121987311	3300009176	Miscanthus Rhizosphere	MQNKKLTEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDFPEQPAD
Ga0105248_108476242	3300009177	Switchgrass Rhizosphere	TEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKACG*
Ga0105249_106261131	3300009553	Switchgrass Rhizosphere	MQTKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVSDLKSTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG*
Ga0105340_10243543	3300009610	Soil	MQNKKLSEEEVQKFMLGCEDLMRLGNKFTTSIRQAVTDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKVEANLEGIETICTKGGKWFSFYLGRAVEKEFYGQPSSERSADVEKFETKQEPTQLTIHQPLAKKARG*
Ga0105069_10559621	3300009800	Groundwater Sand	MQNKKLSEEEVQKFMQGCEDLMHLGNKFTTSIRQAVTDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAIEKEFSGQDSPELSADVQKFEPKREPTQLTIRHPLAKKARG*
Ga0126382_120722721	3300010047	Tropical Forest Soil	QFMQGCEDLMRLGNKFTTSIRQAIADLKSTYDPALKSQYVDPVVVELLTRSLHDFEKKVEANLEGIEKICTKGGKWFSFYLGRAVEKEYSGQPSPERPADVQKFEAKREPTQLTIRHPQAKKARG*
Ga0134121_117203051	3300010401	Terrestrial Soil	MQNKKLSEEEVQKFMQGCEDLMLLGNKFTTSIRQALTDLKRTYDPVLKSQYTDKAVVELLTRSLQDFEKKLDANLEGIDKICTKGGKWFSYYLGRVVEKELSGEAPHGNHSPEAPKRESSREPTQLIRTRPLVKKAGG*
Ga0134123_107292461	3300010403	Terrestrial Soil	MPNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVMDLKGAYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIERDFSGQDSPEQPAEVQKFEPKREPTQLTLRHPLAKKARG*
Ga0137325_10434201	3300011415	Soil	MQNKKLSEEEVQKFMQGCEDLMLLGNKFTTSIRQAVTELKSTYDPALKSQYVDKVVVELLTRSLRDFEKKVEANLEGIEKICTKGGKWFSFYLGRAVEKEFPAQPATERSPEVQKFETKREPTQLTIHQSPLVKKARG*
Ga0137455_12424962	3300011429	Soil	MQNKKLSEEEVQQFMQGCEDLMRLGNKFTTSIRQAVTDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAIEKEFSGQDSPEPPADVQKFEPKREPTQ
Ga0137428_10618912	3300011432	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKSTYDPALKSQYMDPVVVELLTRSLEDFEKKVEANLEGIEKICTKGGKWFSFYLGRAVEKEFSGQPSSERSADVEKFETKQEPTQLTIHQPLAKKARG*
Ga0137429_12612651	3300011437	Soil	SEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKVEANLEGIEKVCTKGGKWFSFYLGRAVEKEFSEQPSSERSADVEKFETKQEPTQLTIHQPLAKKARG*
Ga0137452_11396611	3300011441	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPAVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAIEKEFSGQPSLERPADVQKFEPKREPTQLTIHHPLAKKARG*
Ga0137431_11405181	3300012038	Soil	DSMQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVSDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAVEKEFAGQGSPERPADVQKFEPKREPTQLTIHQPLAKKASG*
Ga0137341_10871712	3300012676	Soil	EVQKFMQGCEDLMRLGNKFTTSIRQAVSDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKVEANLEGIETICTKGGKWFSFYLGRAVEKEFAGQGSPERPADVQKFEPKREPTQLTIHHPLAKKARG*
Ga0157288_103090032	3300012901	Soil	MQNKKLREEEVQNFMQGCEDLMRLGNKFTTSIRQAVTDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICSKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQL
Ga0163162_105089692	3300013306	Switchgrass Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNQFTTSIRQALTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIERDFSGQDSPEQPAEVQKFEPKREPTQLTLRHPLAKKARG*
Ga0157375_121140432	3300013308	Miscanthus Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVMDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG*
Ga0075301_10357871	3300014262	Natural And Restored Wetlands	MQNKKLSEDEVQKFMQGCEDLMRLGNQFTTSIRQAITDLKGTYDPALKSQYVDPVVVELLTRSLQDFEKKVEANLEGIEKICTKGGKWFSFYLGRAVETEFSGQPPVERPAEVQKFEAKREPTQIAFPQPRPKKAIG*
Ga0157380_127714322	3300014326	Switchgrass Rhizosphere	MQNKKLSEEEVQQFMQGCEDLMRLGNKFTTSIRQAVTDLKTTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQ
Ga0180083_10491841	3300014875	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAVEKEFSGEPSPEQPADLQKFEPKREPTQLTIRHPLAKKARG*
Ga0173483_105898651	3300015077	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNQFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQEFEKKLEANLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG*
Ga0180085_10128242	3300015259	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGSKFTTSIRLAVTDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAVEKEFSEEPSPEQPADGVQKFEPKREPTQLTIRHPLAKKALG*
Ga0180085_12385881	3300015259	Soil	SMQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVSDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKVEANLEGIDKICTKGGKWFSFYLGRAVEKEFSGEPSSQRSADVEKFEAKREPTQLTIHQPLAKKASG*
Ga0132258_112787142	3300015371	Arabidopsis Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVMDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSEQDSLEQPAEVQKFEPKREPTQLTLRHPLAKKARG*
Ga0132257_1012206972	3300015373	Arabidopsis Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVMDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQQSEPKREPTQFTLRHPLAKKARG*
Ga0184634_104385131	3300018031	Groundwater Sediment	MQNKKLSEEEIQKFMQGCEDLMRLGNKFTTSIRQAVTELKSTYDPALKSQYVESAVVELLTRSLQDFEKKLEANLEGIDKICTKGGKWFSFYLGRAVEKEFSGQPAPGGRSAEVQMFEARREPTQLTIHPRPLAKKAGG
Ga0184626_104185141	3300018053	Groundwater Sediment	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTELKDTYNPALKSQYVDKVVVELLTRSLQEFEKKVEANLEGIDKICTKGGKWFSFYLGRAVEKEFSGQLVPEGSSAEVQMFDASREPTQLTIGPRPLAKKAGG
Ga0184637_100385002	3300018063	Groundwater Sediment	MQNKKLSEEEIQKFMQGCEDLMRLGNKFTTSIRQAVTELKSTYDPALKSQYVESAVVELLTRSLQDFEKKLEANLEGIDKICTKGGKWFSFYLGRAVEKEFSGQPAPEGRSAEVQMFEARREPTQLTIHPRPLAKKAGV
Ga0184635_102189712	3300018072	Groundwater Sediment	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTELKSTYDPALKSQYVDKVVVELLTRSLQDFEKKVEANLEGIEKICTKGGKWFSFYLGRAVENEFSGQPSPERPADVQKFEAKREPTQLTIRNSSLAKKARG
Ga0184640_100971471	3300018074	Groundwater Sediment	MQNKKLSEEEIQKFMQGCEDLMRLGNKFTTSIRQAVTELKSTYDPALKSQYVEKAVVELLTRSLQDFEKKVEANLDGIDTICTKGGKWFSFYLGRAVEKEFSGQPAPGGRSAEVQMFEARREPTQLTIHPRPLAKKAGV
Ga0184633_100118203	3300018077	Groundwater Sediment	MQNKKLSEEEIQKFMQGCEDLMRLGNKFTTSIRQAVTELKSTYDPALKSQYVESAVVELLTRSLQDFEKKLEANLEGIDTICTKGGKWFSFYLGRAVEKEFSGQPAPGGRSAEVQMFEARREPTQLTIHPRPLAKKAGV
Ga0184627_100975533	3300018079	Groundwater Sediment	MQNKKLSEEEIQKFMQGCEDLMRLGNKFTTSIRQAVTELKSTYDPALKSQYVESAVVELLTRSLQDFEKKLEANLEGIDKICTKGGKWFSFYLGRAVEKEFSGQPAPGGRSAEVQMFEARREPTQLTIHPRPLAKKAGV
Ga0184639_100041746	3300018082	Groundwater Sediment	MQNKKLSEEEIQKFMQGCEDLMRLGNKFTTSIRQAVTELKSTYDPALKSQYVESAVVELLTRSLQDFEKKLEANLEGIDTICTKGGKWFSFYLGRAVEKEFSGQPAPGGRSAEVQMFEARREPTQLTIHPRPLAKKAG
Ga0184628_100604833	3300018083	Groundwater Sediment	MQNKKLSEEEVQQFMQGCEDLMRLGNKFTTSIRQAVTDLKTTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAIEKEFSGQPSPERPADVQKFEPKREPTQLTIHPLAKKARG
Ga0190270_102196452	3300018469	Soil	MQNKKLSEEEVQKFMQGCEDLMCLGNKFTTSIRQAVTDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAIEKEFSGQDSPEPPADVQKFEPKREPTQLTIHHPLAKKARG
Ga0190274_118697531	3300018476	Soil	MQNKKLSEEEVQQFMQGCEDLMRLGNKFTTSIRQAVTDLKTTYDPALKSQYVDPVVVELLTQSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAIEKEFSGQPSPERPADVQKFEPKREPTQLTIHPLAKKARG
Ga0180116_11248261	3300019229	Groundwater Sediment	KYKKFMQGCEDLMRLGNKFTTSIRQAVSDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKVEANLEGIDKICTKGGKWFSFYLGRAVEKEFSGEPSSQRSADVEKFEAKREPTQLTIHQPLAKKASG
Ga0180112_12725921	3300019238	Groundwater Sediment	NKFTTSIRQAVNDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAVEKEFSGEPSPEQPADVQKFEPKREPTQLTIRHPLAKKARG
Ga0187892_1000195734	3300019458	Bio-Ooze	MQNKKLSEDEVQKFMQGCEDLMLLGNKFTTSIRQAVLDLKTTYDPALKSQYVDPVVVDLLTQSLEDFEKKVEANLEGIDKICTKGGKWFSFYLGRAVEQAPTGRAAEVQKFETKREPTQLTIHKWHA
Ga0187892_100546243	3300019458	Bio-Ooze	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKNTYDPALKSQYVDKAVVELLTRSLQDFEKKVEANLEGIDKICTKGGKWFSFYLGRAVEKEFSGQPVSEGRSAEVQMFETRREPTQLTIHPRPLAKKAGG
Ga0187893_1000365029	3300019487	Microbial Mat On Rocks	MQNKKLSEDEVQKFMQGCEDLMLLGNKFTTSIRQAVTDLKSAYDPALKSQYVDKVVVELLTRSLEDFEKKVEANLEGIDKICTKGGKWFSFYLGRAVEKEFVGQPSSERTTDLQKFEAKREPTQLTIHPSTLAKKARG
Ga0187893_1000420124	3300019487	Microbial Mat On Rocks	MHNKKLSEDEVQKFMQGCEDLMRLGNKFTTSIRQAVADLKGTYDPALKSQYVEKAVVELLTRSLQDFEKKVEANLDGIDKICTKGGKWFSFYLGRAVEKEFSSHPGPDGRPAEVQMFEARREPTQLTIRSRSLAKKAGGQS
Ga0187893_104363682	3300019487	Microbial Mat On Rocks	MQNKKLSEDEVQKFMQGCEDLMLLGNKFTTSIRQAVTDLKSAYDPALKSQYVDKVVVELLTRSLEDFEKKVEANLEGIDKICTKGGKWFSFYLGRAVEKEFVGQPSSERTTDLQKFEAKREPTQLTIHPSALAKKARR
Ga0180118_11678502	3300020063	Groundwater Sediment	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAVEKEFSGEPSPEQPADVQKFEAKREPTQLTIRHSPLTKKARG
Ga0180118_11835982	3300020063	Groundwater Sediment	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVSDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKVEANLEGIDKICTKGGKWFSFYLGRAVEKEFSGEPSSQRSADVEKFEAKREPTQLTIHQPLAKKASG
Ga0180109_11925992	3300020067	Groundwater Sediment	EDLMRLGNKFTTSIRQAVNDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAVEKEFSGEPSPEQPADVQKFEPKREPTQLTIRHPLAKKARG
Ga0184649_13605221	3300020068	Groundwater Sediment	MQNKKLSEEEVQKFMQGCEDLMLLGNKFTTSIRQAVTDLRNTYDPVLKSQYVEKAVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAVEKEFSGQPAPEGRSAEVQVFEARREPTHLTIHPRPLAKKAGG
Ga0163153_102712462	3300020186	Freshwater Microbial Mat	MQTKKLSEEEVQKFMQGCEDLMLLGNKFTTSIRQAVTDLKGTYDPVLKSQYMDKAVVELLTRSLQDFEKKVEGNLEGLDKICTKGGKWFSFYLGRAVEKEFSGQPAPGSRSAEVQMFEARRDPTQLTIGPRPLAKKAGG
Ga0194131_100298271	3300020193	Freshwater Lake	MQNRKLSDEEVQRFMQGCEDLMRLGSRFTSIIRQALSELKSTYEPALRSQYVEKAVVELLTKSLQDFEKKVESNLAGIDKVCAKGGKWFPYYLGRAVEQELSGQPAELQGFETGRERESAQLTIFPLPTAKKAGG
Ga0163150_100077004	3300020195	Freshwater Microbial Mat	MQTKKLSEEEVQKFMQGCEDLMLLGNKFTTSIRQAVTDLKGTYDPVLKSQYMDKAVVELLTRSLQDFEKKVEGNLEGLDKICTKGGKWFSFYLGRAVEKEFSGQPAPGGRSAEVQMFDARREPTELTTGPHPLAKKAGG
Ga0209751_105991781	3300025327	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKVEANLEGIDKICTKGGKWFSFYLGRTVEKEFSGQPGRPAEVQKFEARKEPTQLAIHPRPLAKKAGG
Ga0210139_10812441	3300025558	Natural And Restored Wetlands	MQNKKLSEDEVQKFMQGCEDLMRLGNQFTTSIRQAITDLKGTYDPALKSQYVDPVVVELLTRSLQDFEKKVEANLEGIEKICTKGGKWFSFYLGRAVETEFSGQPPVERPAEVQKFE
Ga0207681_108414501	3300025923	Switchgrass Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIERDFSGQDSPEQPAEVQKFEPKREPTQLTLRHPLAKKARG
Ga0207686_107101981	3300025934	Miscanthus Rhizosphere	MQNKKLTEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAK
Ga0207708_111540091	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	SMQNKKLSEEEVQQFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYLDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIERDFSGQDSPEQPAEVQKFEPKREPTQLTLRHPLAKKARG
Ga0207428_106688492	3300027907	Populus Rhizosphere	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKSTYDPALKSQYVDPVVVELLTRSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAIEKEFSGQDSPEPPADVQRFEPKREPTQLTIHHPLAKKARG
Ga0268265_103868461	3300028380	Switchgrass Rhizosphere	MQTKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGAYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEKEFSGQPSPERPADVQKFEPKREPTQLTIHPLAK
Ga0307468_1007673081	3300031740	Hardwood Forest Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTQSLQDFEKKLEANLEGIEKICTKGGKWFSFYLGRAVEKEFSEPHSPERPAEVQKFEAKREPTQLTIHPLAKKARG
Ga0315290_103511332	3300031834	Sediment	MQNKKLSEEEVQKFMQGCEDLMLLGNKFTTSIRQAVTDLRNTYDPVLKSQYVEKAVVELLTRSLQDFEKKVEVNLDGLDTICTKGGKWFSFYLGRAVEKEFSGQPAPEGRPAEVQVFEARREPTHLTIHPRPLAKKAGG
Ga0310904_100910253	3300031854	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNQFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIERDFSGQDSPEQPAEVQKFEPKREPTQLTLRHPLAKKARG
Ga0310900_109142291	3300031908	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNQFTTSIRQALTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIERDFSGQDSPEQPAEVQKFEPKREPTQLTLR
Ga0310897_102439452	3300032003	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSEPDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Ga0310906_103088811	3300032013	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPAEVQKFEPKREPTQLTLRHPLAKKARG
Ga0310899_102931882	3300032017	Soil	GCEDLMRLGNKFTTSIRQAVTDLKTTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKAR
Ga0307470_111429702	3300032174	Hardwood Forest Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTELKSTYDPALKSQYVDKVVVELLTRSLQDFEKKVEANLEGIEKICTKGGKWFSFYLGRAVEKEFSAQPSPERPADVQKFEAKREPTQLTIRNSSLAKKARV
Ga0310889_101282432	3300032179	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLETNLEGIEKICTKGGKWFSFYLGRAIEREFSEPDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Ga0310896_104786541	3300032211	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Ga0314785_022238_59_472	3300034479	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTVLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSEQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Ga0370545_079395_1_369	3300034643	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLEDFEKKLEANLEGIEKICTKGGKWFSFYLGRAIEKEFSGQDSPERPADVQKFEPREPTQ
Ga0314782_072670_2_340	3300034661	Soil	NKFTTSIRQAVTDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSEPDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Ga0314783_038056_375_788	3300034662	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNQFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Ga0314787_016475_589_1002	3300034665	Soil	MQNKKLTEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSEQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Ga0314788_053747_8_421	3300034666	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLETNLEGIEKICTKGGKWFSFYLGRAIEREFSEPDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Ga0314793_043070_206_619	3300034668	Soil	MQNKKLSEEEVQQFMQGCEDLMRLGNKFTTSIRQAVTDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Ga0314794_099672_2_334	3300034669	Soil	FTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Ga0314795_079330_16_387	3300034670	Soil	MQGCEDLMRLGNKFTTSIRQAVTDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSEQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Ga0314797_116458_97_510	3300034672	Soil	MQNKKLTEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Ga0314800_025050_383_748	3300034675	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNQFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRATEKEFSGQDSPEPPADVQRFEPKREP
Ga0314801_019149_718_1131	3300034676	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKGTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDFPEQPADVQKFEPKREPTQLTLRHPLAKKARG
Ga0314803_034130_298_711	3300034678	Soil	MQNKKLSEEEVQKFMQGCEDLMRLGNKFTTSIRQAVTDLKDTYDPALKSQYVDPVVVELLTRSLQDFETKLESNLEGIEKICTKGGKWFSFYLGRAIEREFSGQDSPEQPADVQKFEPKREPTQLTLRHPLAKKARG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100015

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences