Metagenome Family F100143

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100143
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	99 residues
Representative Sequence	PLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTLRRPPQDALYARVRSYLERIGERRVFPTAEQLPR
Number of Associated Samples	73
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.76 %
% of genes near scaffold ends (potentially truncated)	52.94 %
% of genes from short scaffolds (< 2000 bps)	96.08 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.196 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (51.961 % of family members)
Environment Ontology (ENVO)	Unclassified (78.431 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (53.922 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.61% β-sheet: 1.55% Coil/Unstructured: 48.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF02771	Acyl-CoA_dh_N	15.69
PF13247	Fer4_11	12.75
PF12797	Fer4_2	3.92
PF12838	Fer4_7	3.92
PF08028	Acyl-CoA_dh_2	2.94
PF13193	AMP-binding_C	1.96
PF00037	Fer4	1.96
PF13404	HTH_AsnC-type	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	18.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.20 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.20 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.20 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	88.24 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	78.43 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	42.16 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	23.53 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	35.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.53 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	34.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.53 %
Unclassified	root	N/A	9.80 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005764\|Ga0066903_105006652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	703	Open in IMG/M
3300010361\|Ga0126378_10279153	All Organisms → cellular organisms → Bacteria → Proteobacteria	1770	Open in IMG/M
3300010361\|Ga0126378_11174972	All Organisms → cellular organisms → Bacteria → Proteobacteria	866	Open in IMG/M
3300010376\|Ga0126381_100376455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1970	Open in IMG/M
3300010376\|Ga0126381_100909903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1267	Open in IMG/M
3300010376\|Ga0126381_101442741	Not Available	995	Open in IMG/M
3300010376\|Ga0126381_102493384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300010376\|Ga0126381_102959674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	675	Open in IMG/M
3300010376\|Ga0126381_103004668	Not Available	670	Open in IMG/M
3300010398\|Ga0126383_11688263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	722	Open in IMG/M
3300010398\|Ga0126383_12062618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300010398\|Ga0126383_12888797	Not Available	561	Open in IMG/M
3300016270\|Ga0182036_10211664	All Organisms → cellular organisms → Bacteria → Proteobacteria	1428	Open in IMG/M
3300016294\|Ga0182041_10303626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1324	Open in IMG/M
3300016319\|Ga0182033_10438812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1111	Open in IMG/M
3300016319\|Ga0182033_10675822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300016341\|Ga0182035_10573870	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300016371\|Ga0182034_11111104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	686	Open in IMG/M
3300016371\|Ga0182034_11350646	Not Available	622	Open in IMG/M
3300016371\|Ga0182034_11880562	Not Available	528	Open in IMG/M
3300016387\|Ga0182040_10465048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1005	Open in IMG/M
3300016387\|Ga0182040_11234467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300016404\|Ga0182037_10952830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	746	Open in IMG/M
3300016422\|Ga0182039_10520621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1030	Open in IMG/M
3300021180\|Ga0210396_10311278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1393	Open in IMG/M
3300021476\|Ga0187846_10000073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58100	Open in IMG/M
3300021560\|Ga0126371_10361734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1588	Open in IMG/M
3300021560\|Ga0126371_10655961	Not Available	1198	Open in IMG/M
3300021560\|Ga0126371_10876131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1042	Open in IMG/M
3300021560\|Ga0126371_11632422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300031231\|Ga0170824_111409389	Not Available	572	Open in IMG/M
3300031543\|Ga0318516_10160794	All Organisms → cellular organisms → Bacteria → Proteobacteria	1291	Open in IMG/M
3300031545\|Ga0318541_10143177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1308	Open in IMG/M
3300031546\|Ga0318538_10451242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	696	Open in IMG/M
3300031546\|Ga0318538_10752674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	529	Open in IMG/M
3300031561\|Ga0318528_10362404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	778	Open in IMG/M
3300031561\|Ga0318528_10395199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	742	Open in IMG/M
3300031561\|Ga0318528_10583488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	600	Open in IMG/M
3300031564\|Ga0318573_10598239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	594	Open in IMG/M
3300031572\|Ga0318515_10199853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1071	Open in IMG/M
3300031573\|Ga0310915_10918643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	613	Open in IMG/M
3300031573\|Ga0310915_10991376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	586	Open in IMG/M
3300031640\|Ga0318555_10079703	All Organisms → cellular organisms → Bacteria → Proteobacteria	1704	Open in IMG/M
3300031668\|Ga0318542_10135169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1216	Open in IMG/M
3300031680\|Ga0318574_10181204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1206	Open in IMG/M
3300031681\|Ga0318572_10401320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	815	Open in IMG/M
3300031681\|Ga0318572_10797106	Not Available	562	Open in IMG/M
3300031708\|Ga0310686_109890508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1775	Open in IMG/M
3300031713\|Ga0318496_10822366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	512	Open in IMG/M
3300031719\|Ga0306917_10296103	All Organisms → cellular organisms → Bacteria → Proteobacteria	1249	Open in IMG/M
3300031719\|Ga0306917_10752728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300031719\|Ga0306917_11032771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300031736\|Ga0318501_10574292	Not Available	618	Open in IMG/M
3300031744\|Ga0306918_10191736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1536	Open in IMG/M
3300031751\|Ga0318494_10693942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	596	Open in IMG/M
3300031753\|Ga0307477_10157427	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300031754\|Ga0307475_10194995	All Organisms → cellular organisms → Bacteria → Proteobacteria	1618	Open in IMG/M
3300031763\|Ga0318537_10139884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	901	Open in IMG/M
3300031764\|Ga0318535_10114947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1186	Open in IMG/M
3300031768\|Ga0318509_10125320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1403	Open in IMG/M
3300031771\|Ga0318546_10030989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3185	Open in IMG/M
3300031778\|Ga0318498_10355404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300031781\|Ga0318547_10823288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	579	Open in IMG/M
3300031782\|Ga0318552_10195313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1023	Open in IMG/M
3300031798\|Ga0318523_10460407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300031805\|Ga0318497_10387438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	781	Open in IMG/M
3300031832\|Ga0318499_10433273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300031845\|Ga0318511_10433800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	604	Open in IMG/M
3300031846\|Ga0318512_10342065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300031859\|Ga0318527_10221941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300031860\|Ga0318495_10483147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300031880\|Ga0318544_10345450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	578	Open in IMG/M
3300031890\|Ga0306925_10267211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1843	Open in IMG/M
3300031890\|Ga0306925_10320841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1665	Open in IMG/M
3300031893\|Ga0318536_10492857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	616	Open in IMG/M
3300031896\|Ga0318551_10173573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1185	Open in IMG/M
3300031897\|Ga0318520_10108890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1565	Open in IMG/M
3300031910\|Ga0306923_10162783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2548	Open in IMG/M
3300031910\|Ga0306923_10785134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1053	Open in IMG/M
3300031910\|Ga0306923_11272638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	782	Open in IMG/M
3300031941\|Ga0310912_10101174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2123	Open in IMG/M
3300031947\|Ga0310909_10743155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	813	Open in IMG/M
3300031954\|Ga0306926_12694926	Not Available	540	Open in IMG/M
3300031954\|Ga0306926_12958862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	508	Open in IMG/M
3300032001\|Ga0306922_10234268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1972	Open in IMG/M
3300032025\|Ga0318507_10032012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1969	Open in IMG/M
3300032039\|Ga0318559_10163319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1015	Open in IMG/M
3300032039\|Ga0318559_10241896	All Organisms → cellular organisms → Bacteria → Proteobacteria	834	Open in IMG/M
3300032041\|Ga0318549_10494955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	550	Open in IMG/M
3300032044\|Ga0318558_10221573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	927	Open in IMG/M
3300032055\|Ga0318575_10688599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	517	Open in IMG/M
3300032059\|Ga0318533_10617076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	796	Open in IMG/M
3300032063\|Ga0318504_10613041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	523	Open in IMG/M
3300032064\|Ga0318510_10260220	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300032065\|Ga0318513_10216447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	925	Open in IMG/M
3300032066\|Ga0318514_10403730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	725	Open in IMG/M
3300032076\|Ga0306924_11228260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	809	Open in IMG/M
3300032089\|Ga0318525_10381469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	723	Open in IMG/M
3300032091\|Ga0318577_10442955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	620	Open in IMG/M
3300032261\|Ga0306920_100583418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1655	Open in IMG/M
3300032261\|Ga0306920_100996427	All Organisms → cellular organisms → Bacteria → Proteobacteria	1220	Open in IMG/M
3300032261\|Ga0306920_101300866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1046	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.02%
Cave	Environmental → Terrestrial → Cave	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	98.04%
Loam	Environmental → Terrestrial → Soil → Loam	0.98%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	82.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.98%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	51.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066903_1050066521	3300005764	Tropical Forest Soil	MSPSTEAEKLRRAALAYVMDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGGS*
Ga0126378_102791532	3300010361	Tropical Forest Soil	MLQFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILNDPELRRALAAWAADAEVDEASLRLRRPPQDALYDHVRSYLEHIGEKRVFPTAEQLRR*
Ga0126378_111749722	3300010361	Tropical Forest Soil	VFSKQEQLCSEIKMAEPIEETRLRRAALTYVMDLHCELTQENGAPPLGTQNQAVDFILGDPQLRRALAAWAAIAEIDEATTAPRRRPPQDPLYHRVRGYLEDIMGPPVFVAAKQSSR
Ga0126381_1003764553	3300010376	Tropical Forest Soil	MLPLTEEERLRLAALAYVIALHEELTQENGAPPLGTQNQAVDFILGDPESRRALAIWAADAEIDEATTAPQRRPPQDALYHRVRDYLEHIIGRRVFPTAKELAR*
Ga0126381_1009099032	3300010376	Tropical Forest Soil	MAEPVKETRLRRAALAYVMDLHCELTQENGAPPLGTQNQAVDFILGDPELRRALAAWAEIAEIDEAITVPRRRPPQDALYHRVRAYLEDIMEPPVFATARQSRR*
Ga0126381_1014427411	3300010376	Tropical Forest Soil	MSPLTEEDKLRLAALAYVTDLHNDLTQESGALPLGTQNQAIEFILGDPELRRALAAWAADAEIHEASLTLRRPLQDALYHRVRTHLDHIKGPGGS*
Ga0126381_1024933841	3300010376	Tropical Forest Soil	MRTHRRVPAFSSCERIEAELKMLALTEEERLRLAALAYVIELHEELTQENGAPPLGTQNQAVDFILGDPELRDALADWASNAEIDEATIIPQRRPPQDVLYHRVRDYLEHIIGRRVFPT
Ga0126381_1029596741	3300010376	Tropical Forest Soil	MLQLTEEGKLRLAALAYVSNLHNELTQENGAPPLGTQNQAVDFILGDPELRRALAAWSADAEVLEATLTLRRPPQDALYHRVRTYLDRIRGPGVFPTEKELAR*
Ga0126381_1030046681	3300010376	Tropical Forest Soil	MVQLTDEARLRLAALDYVTALHNEVTQEHGMPPLGTQNQAVDFMLGDPELRRALAAWADGAHIDQMTPSLRRPPHDAFYHRVRSYLERIARPQVFPVTKELDR*
Ga0126383_116882631	3300010398	Tropical Forest Soil	ELTQENGAPPLGTQNQAVDFILGDPELRRALAAWAADAELEEASLRLRRPPQDALYDQVRRYLEHIGEKRVFPTAEQLRR*
Ga0126383_120626181	3300010398	Tropical Forest Soil	MAQLTEEARLRLAALNYVIVLHNELTQENGAPPLGTQNQAVDLILGDPESRRALAGWMARADIDEMTTLLRRPPHDALHDRVRSYLEHITRPRVFPAAEQPGR*
Ga0126383_128887971	3300010398	Tropical Forest Soil	MVQLTEEARLRLAALNYVTALHNEVTQEHGMPPLGTQNQAVDFMLGDPELRRALAAWADGAHIDQMTPSLRRPPHDAFYHRVRSYLERIAR
Ga0182036_102116642	3300016270	Soil	VLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTLRRPPQDALYARVRSYLERIGERRVFPTAEQLP
Ga0182041_103036262	3300016294	Soil	MLPLTEEERLRLAALAYVIELHEELTQENGAPPLVTQNQAVAFILGDPESRRALAMWAANAEIDEATTTPQRRPPQDALYHRVRTYLEHIGERRVFPAAEQYRR
Ga0182033_104388121	3300016319	Soil	MSPLTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDPESCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAG
Ga0182033_106758222	3300016319	Soil	ELTQENGAPPLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTWRRPPQDALYARVRSYLERIGERRVFPTAEQLPR
Ga0182035_105738702	3300016341	Soil	MLPFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILSNPELRRALAAWAADAEVDEASLRLRRPPQDALYDQV
Ga0182034_111111041	3300016371	Soil	IDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALASWAAGTEVEEATLTLRRPPQDALYDHVRSYLEHIGERRVFPTAKELAR
Ga0182034_113506461	3300016371	Soil	MAQLTEEARLRLAALNYVAALHKEVTQEHGMPPLGIQNQAVDFILGDPELRRALTAWAEGTHIDEITPPLRRPPHDALHHRVRDYLERIPRPRVFPVTKELDR
Ga0182034_118805622	3300016371	Soil	VVPLTEEERLRLAALAYVIDLHDELTQENGTPPLGTQNQTVDFILGNPELRRALAAWAADTEVDEASLKLRRPPQDALYDQVR
Ga0182040_104650481	3300016387	Soil	SRRRRDVLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTLRRPPQDALYARVRSYLERIGERRVFPTAEQLPR
Ga0182040_112344671	3300016387	Soil	MLPFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILSNPELRRALAAWAADTEVDEASLKLRRPPQDALYDQVRSYLEHIGEKRVFP
Ga0182037_109528301	3300016404	Soil	EERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILSNPELRRALAAWAADAEVDEASLKLRRPPQDALYDQVRSYLEHIGEKRVFPTAEQLRR
Ga0182039_105206211	3300016422	Soil	EEERLRLAALAYVVDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALASWAAGTEVEEATLTLRRPPQDALYDHVRSYLEHIGERRVFPTAKELAR
Ga0210396_103112782	3300021180	Soil	MMQLTKEARLRLAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDPELRRALADWAAGADLKQITTAMRRPPQDALYHRVRSYFEQIDGRRIFPAAKQLRR
Ga0187846_1000007328	3300021476	Biofilm	MAEPIEETKLRRAALVYVMDLHCELTQENGAPPLGTQNQAVDLILGDPELRRALAEWAANAEIDAATTAPRRRPPQDTLYHRVRAYLEDIMGPPVFATAKQPNR
Ga0126371_103617341	3300021560	Tropical Forest Soil	TGVRVRGRLRRTRGWEPVFSKQEQLCSEIKMAEPIEETRLRRAALTYVMDLHCELTQENGAPPLGTQNQAVDFILGDPELRRALAAWAEIAEIDEAITVPRRRPPQDALYHSVRAYLEDIMEPPVFATARQSRR
Ga0126371_106559612	3300021560	Tropical Forest Soil	TAMAQLTEEARLRLAALNYVAALHKEVTQEHGMPPLGTQNQAVDFILGDPELRRALTAWAEGTHIDEITTLVRRPPHDALHHRVRDYLERIPRPRVFPVTKELDR
Ga0126371_108761312	3300021560	Tropical Forest Soil	MLPLTEEEKLRLAALAYVIELHEELTQENGAPPLGTQNQAVDFILGDPELRDALADWAANAEIDEATTTPQRRPPQDVLYHRVRDYLEHMIGRRVFPTAKELAR
Ga0126371_116324222	3300021560	Tropical Forest Soil	MLALTEEERLRLAALAYVIELHEELTQENGAPPLGTQNQAVDFILGDPESRRALAMWAANAEIAEATTTPQRRPPQDALYHRVRDYLEHIFGRRVFPTAKELAR
Ga0170824_1114093891	3300031231	Forest Soil	VTALHNEVTQENETPPLGTQNQPMDLILGDPELRRALTAWADGADIDQMTTTLRRPPHDALYHRVRSYLEQITQPRVFPVAKELGR
Ga0318516_101607941	3300031543	Soil	MLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALASWAAGTEVEEATLTLRRPPQDALYDHVRSYLEHIGERRVFPTAKELAR
Ga0318541_101431772	3300031545	Soil	MSPLTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAR
Ga0318538_104512421	3300031546	Soil	MSPSTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAR
Ga0318538_107526741	3300031546	Soil	EAEFHMLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTTWAADAEVDEAALTLRRPPQDALYHRVRTYLEHIGERRVFPAAEQFRR
Ga0318528_103624041	3300031561	Soil	MLPFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILSNPELRRALAAWAADAEVDEASLKLRRPPQDALYDQVRSYLEHIGEKRVFPTAEQLRR
Ga0318528_103951992	3300031561	Soil	VLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTLRRPPQDALYARVRSYLERIGERRVFPTAEQLPR
Ga0318528_105834881	3300031561	Soil	MLPLTEEERLRLAALAYVIDLHDELTQEDGAPPLGTQNQAVDFILGDPELRRALTTWAADAEVDEAALTLRRPPQDALYHRVRTYLEHIGERRVFPAAEQFRR
Ga0318573_105982392	3300031564	Soil	MLPFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILSNPELRRALAAWAADAEVDEASLRLRRPPQDALYDQVRSYLEHIGAKRVFPTAE
Ga0318515_101998531	3300031572	Soil	AYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALASWAAGTEVEEATLTLRRPPQDALYDHVRSYLEHIGERRVFPTAKELAR
Ga0310915_109186431	3300031573	Soil	SELAARRLRFPLRADRGGDEMLPFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILSNPELRRALAAWAADAEVDEASLRLRRPPQDALYDQVRSYLEHIGAKRVFPTAEQLRR
Ga0310915_109913761	3300031573	Soil	EEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTLRRPPQDALYARVRSYLERIGERRVFPTAEQLPR
Ga0318555_100797032	3300031640	Soil	MLPFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILSNPELRRALAAWAADTEVDEASLKLRRPPQDALYDQVRSYLEHIGEKRVFPTAEQLRR
Ga0318542_101351693	3300031668	Soil	MSPSTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAG
Ga0318574_101812042	3300031680	Soil	VFLLREERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTLRRPPQDALYARVRSYLERIGERRVFPTAEQLPR
Ga0318572_104013201	3300031681	Soil	MLPLTEAEKLRLAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDPESCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAG
Ga0318572_107971061	3300031681	Soil	MVQLTEETRLRLAALNYVTALHNEVTQEHGMPPLGTQNQAVDLILGDPELRRALTAWAEGAHIDEMTPSLRRPPHDALYHRVRRYLEEIPRARVFPTADRPSR
Ga0310686_1098905081	3300031708	Soil	MVLLTEETRLRRAALIYVMNLHNGLTQENGAPPLGTQNQTVNFILGDPELRRALSDWAASAEIDEATLTLRRLPQDALYLRVRSHLEQIMGPPVFATAKQPGR
Ga0318496_108223661	3300031713	Soil	MLRLTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAR
Ga0306917_102961032	3300031719	Soil	VLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTLRRPPQDALYARVRSYLERIGERR
Ga0306917_107527282	3300031719	Soil	MLPFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILSNPELRRALAAWAADAEVDEASLRLRRPPQDALYDQVRSYLEHIGAKRVFPTAEQLRR
Ga0306917_110327712	3300031719	Soil	MLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTTWAADAEVDEAALTLRRPPQDALYHRVRTYLEHIGERRVFPAAEQFRR
Ga0318501_105742921	3300031736	Soil	TEEERLRLAALAYVIDLHDELTQENGAPPNQTVDFILGDPELRRALAAWAADAEVDEASLRLRRPPQDALYDQVRSYLEHIGAKRVFPTAEQLRR
Ga0306918_101917362	3300031744	Soil	MLPFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILSNPELRRALAAWAADAEVDEASLRLRRPPQDALYDQVRSYLEHIGEKRVFPTAEQLRR
Ga0318494_106939421	3300031751	Soil	MSPSTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIGEATLTLRRLPRDALYHRVRTHLDHIKGPGVFPTAKDLAR
Ga0307477_101574272	3300031753	Hardwood Forest Soil	MVRSTEETRLRLAALAYVINLYDELTQENGAPPLGTQNQAVDFILGDPELRCALADWAANAEIDEATTAPPRRPPYDALYHRVRGFLEPILGPRVFSTPKPPDS
Ga0307475_101949952	3300031754	Hardwood Forest Soil	MVRSTEETRLRLAALAYVINLYDELTQENGAPPLGTQNQAVDFILGDPELRRALADWAANAEIDEATTAPPRRPPYDALYHRVRGFLEPILGPRVFSTPKPPDS
Ga0318537_101398841	3300031763	Soil	PLRADRGGDEMLPFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILSNPELRRALAAWAADAEVDEASLRLRRPPQDALYDQVRSYLEHIGEKRVFPTAEQLRR
Ga0318535_101149471	3300031764	Soil	MSPSTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDPESCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAG
Ga0318509_101253201	3300031768	Soil	AEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAR
Ga0318546_100309894	3300031771	Soil	LAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALASWAAGTEVEEATLTLRRPPQDALYDHVRSYLEHIGERRVFPTAKELAR
Ga0318498_103554042	3300031778	Soil	LRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALASWAAGTEVEEATLTLRRPPQDALYDHVRSYLEHIGERRVFPTAKELAR
Ga0318547_108232881	3300031781	Soil	MSPSTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADGEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAR
Ga0318552_101953132	3300031782	Soil	KLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDPESCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAR
Ga0318523_104604072	3300031798	Soil	MLPFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILSNPELRRALAAWAADTEVDEASLKLRRPPQDALYDQVRSYLEHIG
Ga0318497_103874381	3300031805	Soil	MSPLTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDPESCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLD
Ga0318499_104332731	3300031832	Soil	MLPLTEAEKLRLAALAYVIDLYNELTQENGAPPLGSQNQAIDFILGDLELCRALAAWAADAEIGEATLTLRRLPRDALYHRVRTHLDHIKGPGVFPTAKDLAR
Ga0318511_104338001	3300031845	Soil	MSPSTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLD
Ga0318512_103420652	3300031846	Soil	LRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAR
Ga0318527_102219411	3300031859	Soil	MSPSTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDPESCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHTKGPGVFPTAKELAR
Ga0318495_104831472	3300031860	Soil	MLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALASWAAGTEVEEATLTLRRPPQDALYDHVRSYLEHI
Ga0318544_103454501	3300031880	Soil	MSPLTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDPELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAR
Ga0306925_102672115	3300031890	Soil	LYNELTQENGAPPLGSQNQAIDFILGDLELCRALAAWAADAEIGEATLTLRRLPRDALYHRVRTHLDHIKGPGVFPTAKELAR
Ga0306925_103208411	3300031890	Soil	EFHMLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTTWAADAEVDEAALTLRRPPQDALYHRVRTYLEHIGERRVFPAAEQFRR
Ga0318536_104928571	3300031893	Soil	RAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTLRRPPQDALYARVRSYLERIGERRVFPTAEQLPR
Ga0318551_101735732	3300031896	Soil	MLPFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILSNPELRRALAAWAADTEVDEASLKLRRPPQDALYDQVRSYLEHIGAKRVFPTAEQLRR
Ga0318520_101088901	3300031897	Soil	VNFYERIEAEFHMLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTTWAADAEVDEAALTLRRPPQDALYHRVRTYLEHIGERRVFPAAEQFRR
Ga0306923_101627836	3300031910	Soil	TEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAR
Ga0306923_107851341	3300031910	Soil	RLAALAYVMNLHEELTQENGAPPLGTQNQTVDFILGDPELRRAVADWAADAEIEDMTTTLRWPPQDALYHSVRRYLERIMGPPVFAAAKQPGR
Ga0306923_112726381	3300031910	Soil	PFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILGNPELRRALAAWAADAEVDEASLRLRRPPQDALYDQVRSYLEHIGEKRVFPTAEQLRR
Ga0310912_101011741	3300031941	Soil	SGSRRRRDVLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTLRRPPQDALYARVRSYLERIGERRVFPTAEQLPR
Ga0310909_107431552	3300031947	Soil	PLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTLRRPPQDALYARVRSYLERIGERRVFPTAEQLPR
Ga0306926_126949261	3300031954	Soil	MVQLTEETRLRLAALNYVTALHNEVTQEHGMPPLGTQNQAVDLILDDPELRRALTAWAEGAHIDEMTPSLRRPPHDALYHRVRRYLEEIPRARVFPTADRPSR
Ga0306926_129588621	3300031954	Soil	MSPSTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHL
Ga0306922_102342682	3300032001	Soil	MSPSTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTYLDHIKGPGVFPTAKDLAR
Ga0318507_100320121	3300032025	Soil	AYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADGEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAR
Ga0318559_101633191	3300032039	Soil	ALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKGPGVFPTAKDLAR
Ga0318559_102418961	3300032039	Soil	MLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALASWAAGTEVEEATLTLRRPPQDALYDHVRSYLEHIGERRVFPTAKELAP
Ga0318549_104949551	3300032041	Soil	LRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTLRRPPQDALYARVRSYLERIGERRVFPTAEQLPR
Ga0318558_102215732	3300032044	Soil	MSPSTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQNALYHRVRAHLDHIKGPGVFPTAKDLAR
Ga0318575_106885991	3300032055	Soil	MLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGIQNQAVDFILGDPELRRALASGAADAEVDEATLTLRRPPQDALYDHVRSYLENIGQRRVFPTAKELAP
Ga0318533_106170761	3300032059	Soil	VHMLPLTEEERLRLAALAYVMNLHEELTQENGAPPLGTQNQTVDFILGDPELRRAVADWAADAEIEDMTTTLRWPPQDALYHSVRRYLERIMGPPVFAAAKQPGR
Ga0318504_106130411	3300032063	Soil	MSPSTEAEKLRRAALAYVIDLHNELTQENGAPPLGTQNQAVDFILGDLELCRALAAWAADAEIDEATLTLRRLPQDALYHRVRTHLDHIKG
Ga0318510_102602201	3300032064	Soil	VLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTLRRPPQDALYARVRSYLERIGERRVFP
Ga0318513_102164471	3300032065	Soil	EEERLRLAALALHDELTQENGAPLLGTQNQAVDFILGDPELRRALTDWAADAEIDEATLTLRRPPQDALYARVRSYLERIGERRVFPTAEQLPR
Ga0318514_104037301	3300032066	Soil	MLPFTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQTVDFILSNPELRRALAAWAADAEVDEASLRLRRPPQDALYDQVRSYLEHIGE
Ga0306924_112282601	3300032076	Soil	MLPLTEDGRLRLAALAYVIESHEELTQENGAPPLGTQNQAVDFILGDPELRHALADWAANAEIDEAPTTLQRRPPYDVLYHRVRDYLEHIGGRRVFPTGKELAR
Ga0318525_103814691	3300032089	Soil	MLPLTEEERLRLAALAYVIDLHDELTQENGAPPLGTQNQAVDFILGDPELRRALASWAAGTEVEEATLTLRRPPQDALYDHVRSYLEHIGERRVFPT
Ga0318577_104429551	3300032091	Soil	AYVIDLHDELTQEDGAPPLGTQNQAVDFILGDPELRRALTTWAADAEVDEAALTLRRPPQDALYHRVRTYLEHIGERRVFPAAEQFRR
Ga0306920_1005834182	3300032261	Soil	MLPLTEAEKLRLAALAYVIDLYNELTQENGAPPLGSQNQAIDFILGDLELCRALAAWAADAEIGEATLTLRRLPRDALYHRVRTHLDHIKGPGVFPTAKELAR
Ga0306920_1009964271	3300032261	Soil	MLPLTEEERLRLAALAYVIDLHDELTQEDGAPPLGTQNQAVDFILGDPELRRALTTWAADAEVDEAALTLRRPPQDALYHRVRTYLEHIGERRVFPAAE
Ga0306920_1013008661	3300032261	Soil	MVQLTEETRLRLAALNYVTALHNEVTQEHGMPPLGTQNQAVDLILGDPELRRALTAWAEGAHIDQMTPSLRRPPHDALYHRVRRYLEEIPRARVFPTADRSSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100143

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences