NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F100194

Metagenome / Metatranscriptome Family F100194

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F100194
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 77 residues
Representative Sequence MAPGRGSPQQSYLKQAVLLEAIIVNNSWSTKIKEIKRIKKSQASIAPGVANHQQTKLLGPNQVTTTTAPTTGKK
Number of Associated Samples 63
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 2.97 %
% of genes near scaffold ends (potentially truncated) 41.18 %
% of genes from short scaffolds (< 2000 bps) 99.02 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Eukaryota (58.824 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere
(80.392 % of family members)
Environment Ontology (ENVO) Unclassified
(90.196 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(89.216 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.98%    β-sheet: 0.00%    Coil/Unstructured: 49.02%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF03732Retrotrans_gag 10.78


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms58.82 %
UnclassifiedrootN/A41.18 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005617|Ga0068859_101105959Not Available872Open in IMG/M
3300009553|Ga0105249_11986881All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum654Open in IMG/M
3300009553|Ga0105249_13279161All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum521Open in IMG/M
3300009976|Ga0105128_116552All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum555Open in IMG/M
3300009980|Ga0105135_107151All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum788Open in IMG/M
3300009981|Ga0105133_127769Not Available528Open in IMG/M
3300009989|Ga0105131_132616All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum561Open in IMG/M
3300009990|Ga0105132_104033Not Available1000Open in IMG/M
3300009992|Ga0105120_1011872All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum867Open in IMG/M
3300009994|Ga0105126_1022315Not Available698Open in IMG/M
3300009995|Ga0105139_1067860All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum658Open in IMG/M
3300010399|Ga0134127_13322767All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum526Open in IMG/M
3300010399|Ga0134127_13417315All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum520Open in IMG/M
3300010401|Ga0134121_12229514All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum585Open in IMG/M
3300014968|Ga0157379_12105245Not Available559Open in IMG/M
3300014968|Ga0157379_12457520Not Available520Open in IMG/M
3300015273|Ga0182102_1004698Not Available904Open in IMG/M
3300015273|Ga0182102_1010299Not Available746Open in IMG/M
3300015280|Ga0182100_1095400Not Available509Open in IMG/M
3300015284|Ga0182101_1056485All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum613Open in IMG/M
3300015290|Ga0182105_1068282All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum593Open in IMG/M
3300015297|Ga0182104_1094080All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum551Open in IMG/M
3300015297|Ga0182104_1118436Not Available505Open in IMG/M
3300015301|Ga0182184_1029570Not Available759Open in IMG/M
3300015306|Ga0182180_1035054All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae718Open in IMG/M
3300015309|Ga0182098_1064181All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum642Open in IMG/M
3300015309|Ga0182098_1073396Not Available613Open in IMG/M
3300015309|Ga0182098_1088750All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum574Open in IMG/M
3300015310|Ga0182162_1013695All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum1060Open in IMG/M
3300015310|Ga0182162_1026003All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum878Open in IMG/M
3300015311|Ga0182182_1028174Not Available829Open in IMG/M
3300015312|Ga0182168_1036405All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum815Open in IMG/M
3300015312|Ga0182168_1053409Not Available717Open in IMG/M
3300015312|Ga0182168_1120850Not Available529Open in IMG/M
3300015313|Ga0182164_1011490All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum1164Open in IMG/M
3300015313|Ga0182164_1138249All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum500Open in IMG/M
3300015316|Ga0182121_1054178Not Available743Open in IMG/M
3300015317|Ga0182136_1107567Not Available560Open in IMG/M
3300015318|Ga0182181_1076178All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum582Open in IMG/M
3300015319|Ga0182130_1044891All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum748Open in IMG/M
3300015320|Ga0182165_1147894Not Available500Open in IMG/M
3300015324|Ga0182134_1011589All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum1186Open in IMG/M
3300015326|Ga0182166_1052615Not Available729Open in IMG/M
3300015327|Ga0182114_1125054Not Available561Open in IMG/M
3300015327|Ga0182114_1159145Not Available506Open in IMG/M
3300015328|Ga0182153_1027838Not Available922Open in IMG/M
3300015329|Ga0182135_1083517Not Available641Open in IMG/M
3300015329|Ga0182135_1097958Not Available604Open in IMG/M
3300015331|Ga0182131_1061934All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum719Open in IMG/M
3300015331|Ga0182131_1102165Not Available597Open in IMG/M
3300015331|Ga0182131_1127727All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum546Open in IMG/M
3300015331|Ga0182131_1128800All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum544Open in IMG/M
3300015332|Ga0182117_1032441Not Available958Open in IMG/M
3300015332|Ga0182117_1118826Not Available587Open in IMG/M
3300015332|Ga0182117_1165774Not Available507Open in IMG/M
3300015333|Ga0182147_1069157All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum721Open in IMG/M
3300015333|Ga0182147_1116606All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum588Open in IMG/M
3300015334|Ga0182132_1046516All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum834Open in IMG/M
3300015335|Ga0182116_1081841All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum702Open in IMG/M
3300015336|Ga0182150_1109491All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum597Open in IMG/M
3300015337|Ga0182151_1152722All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum521Open in IMG/M
3300015337|Ga0182151_1165431All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum504Open in IMG/M
3300015338|Ga0182137_1132224All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum574Open in IMG/M
3300015338|Ga0182137_1141755Not Available557Open in IMG/M
3300015338|Ga0182137_1150031Not Available543Open in IMG/M
3300015339|Ga0182149_1145362Not Available543Open in IMG/M
3300015340|Ga0182133_1169860Not Available531Open in IMG/M
3300015348|Ga0182115_1215001Not Available615Open in IMG/M
3300015348|Ga0182115_1217964All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum610Open in IMG/M
3300015348|Ga0182115_1260651All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum550Open in IMG/M
3300015348|Ga0182115_1274587All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum534Open in IMG/M
3300015349|Ga0182185_1069129Not Available969Open in IMG/M
3300015349|Ga0182185_1100850Not Available829Open in IMG/M
3300015349|Ga0182185_1170678All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum652Open in IMG/M
3300015352|Ga0182169_1129382All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum819Open in IMG/M
3300015352|Ga0182169_1166214All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum721Open in IMG/M
3300015352|Ga0182169_1229930Not Available604Open in IMG/M
3300015352|Ga0182169_1261189All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum562Open in IMG/M
3300015352|Ga0182169_1295727Not Available523Open in IMG/M
3300015352|Ga0182169_1300401All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum518Open in IMG/M
3300015353|Ga0182179_1053763All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum1107Open in IMG/M
3300015353|Ga0182179_1148677All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum729Open in IMG/M
3300015353|Ga0182179_1313653Not Available511Open in IMG/M
3300015354|Ga0182167_1196215All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum739Open in IMG/M
3300015354|Ga0182167_1286908All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum587Open in IMG/M
3300015354|Ga0182167_1320476All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum546Open in IMG/M
3300017412|Ga0182199_1116124Not Available629Open in IMG/M
3300017422|Ga0182201_1116300All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum543Open in IMG/M
3300017432|Ga0182196_1090260All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum609Open in IMG/M
3300017432|Ga0182196_1138582All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum525Open in IMG/M
3300017439|Ga0182200_1095218All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum610Open in IMG/M
3300017439|Ga0182200_1162682All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum504Open in IMG/M
3300017445|Ga0182198_1137834All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum586Open in IMG/M
3300017446|Ga0182217_1133699All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum583Open in IMG/M
3300017691|Ga0182212_1106552All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum631Open in IMG/M
3300017694|Ga0182211_1148251All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum558Open in IMG/M
3300025986|Ga0207658_11898672All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum543Open in IMG/M
3300026095|Ga0207676_12465425Not Available517Open in IMG/M
3300028053|Ga0268346_1042397All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum511Open in IMG/M
3300028472|Ga0268315_1021383All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum547Open in IMG/M
3300033535|Ga0314759_1200224Not Available635Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere80.39%
Switchgrass AssociatedHost-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated7.84%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.96%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009976Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_186 metaGHost-AssociatedOpen in IMG/M
3300009980Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaGHost-AssociatedOpen in IMG/M
3300009981Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaGHost-AssociatedOpen in IMG/M
3300009989Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaGHost-AssociatedOpen in IMG/M
3300009990Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaGHost-AssociatedOpen in IMG/M
3300009992Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaGHost-AssociatedOpen in IMG/M
3300009994Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaGHost-AssociatedOpen in IMG/M
3300009995Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015273Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015280Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015284Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015290Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015297Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015301Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015306Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015309Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015310Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015311Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015312Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015313Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015316Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015317Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015318Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015319Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015320Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015324Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015326Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015327Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015328Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015329Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015331Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015332Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015333Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015334Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015335Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015336Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015337Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015338Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015339Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015340Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015348Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015349Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015352Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015353Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015354Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017412Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017422Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017432Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017439Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017445Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017446Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017691Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017694Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028053Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028472Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300033535Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0068859_10110595933300005617Switchgrass RhizosphereMAPGQGPLQQSYLKQVALLEAITDNNSWRSKIKETRRIKKLQVTIDPGQTKPLGLSQIATTTTAGATGRK*
Ga0105249_1198688113300009553Switchgrass RhizosphereHFMAPGQGLPQQSYLKQVVPPEAIIVNNSWSSKIKETRRIKKSRASIAPEVANHRQTKPLGLNQVATTIAGTIGRR*
Ga0105249_1327916123300009553Switchgrass RhizospherePPQQSYLKQVILLEAIIANNSWSSKIKETRRIRKSQAFIDPGVANHRQTKLLGLNQVATTTEGTTGKK*
Ga0105128_11655223300009976Switchgrass AssociatedSYTLPRMLLNNSRDKTRCPHSTTPGRGLPQQSYLKKVILLEAIIANNSCSSKIKEIMMIRKSQATIDPGVASHCQTKLLGLSQITTTTAGTTGKR*
Ga0105135_10715123300009980Switchgrass AssociatedMAPGQGPLQQSYLKQVAFLEAITDNNSWRSKIKETRRIKKLQVTIDPGVANHRQTKLLGLSQIATTTTMGTTGRK*
Ga0105133_12776933300009981Switchgrass AssociatedLWQQSYLRQAVPLEVTIDNNSRSNKFKEIKRIKKPRVAIAPGVANHQQTKLLGLSRTATTTTEKK*
Ga0105131_13261613300009989Switchgrass AssociatedSYTLPKMLLNSSRNKTRCPHFIAPGRGPPQQSYLKQVVAPEDITDNNSWSIKIKETKRINKSQVSIAPGVANHRQIKLMGLSQIATTTAATTGKK*
Ga0105132_10403323300009990Switchgrass AssociatedMALDRRPPQQSYLKQAVLLEPIIVNNSWSTIIKEIKRIKKSQASIAPGVANHWQTKLLGPNQVATTTVPTTWKK*
Ga0105120_101187223300009992Switchgrass AssociatedMAPGRGPPQQSYPKQAVLLEAIIVNNSWRTKFKETKRIKKSQASIALGVVNHQQTKLLGLNQVAKTTVATTEKK*
Ga0105126_102231523300009994Switchgrass AssociatedMAPGRGPPQQSYLKQVVLLEAIIANNSWSKTKETRRIKKLQATIEPGVANQQQTKLLGLNQIATTIVAKTGKK*
Ga0105139_106786023300009995Switchgrass AssociatedMVHGQRLRQQSYLRQAVLLEITIDNNSRSNKFKEIKRIKKPRAAIAPGVANSRQTRLLGLSQITTTTTVGTIGKR*
Ga0134127_1332276713300010399Terrestrial SoilGRGLPQQSYLKKVVNLEAIIANNSCSSKIKEIRMIRKSQATIDPGVANHQQTKLLGLNQITTTTMGTTGKR*
Ga0134127_1341731513300010399Terrestrial SoilRTLLNNSRDKTRCPHSMAPGQGPLQQSYLKQVALLEAITDNNNWRSKIKETRRIKKLQVTIDPGQTKPLDLSQIATTTTAGTTGRK*
Ga0134121_1222951423300010401Terrestrial SoilLPFMAPDRGPPQLSYLRQVVPPEAVTVNNSWSNKIKGTKRIRKSQASITPGVANHRQTKLLGLNQVATTIVGTIGRK*
Ga0157379_1210524523300014968Switchgrass RhizosphereMAPVQGPRQQSYLKQAVPPEAIIVNNSRSTKTKEIKSIKKSQASIAPGVANHQQTKLLGLNRIATTIAAKTGKKLPIP*
Ga0157379_1245752013300014968Switchgrass RhizosphereGREPPLQSYLKQVVLLEAIIVNNSWSSKIKETRRIRKSQASIDPGVANHRQTKPLGLSQIATTTTTAGTTVKR*
Ga0182102_100469813300015273Switchgrass PhyllosphereMAPGQGPRQQLYLKQAVLLEAIIVTSSRSSKIKEIKRIKKSLVSIAPGVANNRQTKPLGLNQIATTTTAGITGRR*
Ga0182102_101029923300015273Switchgrass PhyllosphereMAPGRGLPQQSYLKQAVPPEAIIVNNSWSSKTKKIRKLQAFFAPGVVNHQQTKLLALNQVATTTAGTIGKK*
Ga0182100_109540013300015280Switchgrass PhyllosphereLRQAVLLEATIVNNSRSSKIKEIKRIRKSRAAIALGVANSQQTKPLGPSQIATTTAGKTGKR*
Ga0182101_105648513300015284Switchgrass PhyllosphereMPLNNSRDKTHCPHSTAPGRGLPQQSYLKQVVLLEAIIVNNSWSSKTKETRRIRKLQAFIDPEVANHRQTKALGLSQIATTTTAGTIGKR*
Ga0182105_106828213300015290Switchgrass PhyllosphereNNLRDETRCPHSMARDQGLPQQSYFRQAVPLEATSVNNSKSSKTKETKRIRKLQAFITPGVVSHQQTKLLGLNRIATTIAAKIGRK*
Ga0182104_109408013300015297Switchgrass PhyllosphereQSYLKQAVLLEAIIINNSWSTKIKEIKRIKKSQASIAPGVANHQQTKLLGLNRIATTIVAKTGKK*
Ga0182104_111843613300015297Switchgrass PhyllosphereMAHGRGPPQQSYLKQVALLEAIIANNSWSSKIKETRRIRKLQVTIDLGVANNQQTKLLGLSQIATTTT
Ga0182184_102957033300015301Switchgrass PhyllosphereMLHTLPRTLLNKLRDKTYCPRFMAPGQGPLQQSYLKQAVLLEAIIINNSWSSKIKEIKRIKKSQASIAPEVANHRQTKILGLNQVATTIAGTTGRK*
Ga0182180_103505413300015306Switchgrass PhyllosphereTLPKMLLYNSRDKTHCPRFTALGRGPPQQSYLKQAVLLEAIIVNNSWSSKIKEIKRIKKSQASIAPGVVNHQQTKLLDLNQVATTTAATTGKKYLIP*
Ga0182098_106418123300015309Switchgrass PhyllosphereMVHGQRLRQQSYLRQAVLLEVTIDNHSRSNKFKEIKRIKKLRAAIAPGVANNRQTRPLGLNQITTTTTAGTTGKR*
Ga0182098_107339623300015309Switchgrass PhyllosphereMAPDQGPLQQSYLKQVVPLEAITVNNSWNSKTKETKRIRKSQAFIVLGVANHQKTKLLGLNRTATTIAVKTGR
Ga0182098_108875023300015309Switchgrass PhyllosphereLQQSYLKQVVPPEATIVNNKTKETKRIRKSHAIIVLGVANHQQTKLLGLNRTATIVAIKTGRK*
Ga0182162_101369523300015310Switchgrass PhyllosphereLNNSRDKTRCPRFTVHGQGPPQQSYLKQAVLLEAIIVNNSWSSKIKEIKRIKKSQASIAPGVANHWQTKLLGPNQVATTTAPTTGKK*
Ga0182162_102600313300015310Switchgrass PhyllospherePLQQSYLKQVVPPGATTVNSKTKETKRIKKLQAIIVPGVANHQQTKLLGLNRTTTTTIAAKTGRK*
Ga0182182_102817433300015311Switchgrass PhyllosphereMSHRVASVIAVIGVLKTGSAMLLNNSRDKTRCPRFMVHGQGPLQQSYLRQAVLLEATIINNSRSSKIKEIKRIRKPRAAIAPGVANSRQTKLRGPSQIATATTTTAGATGK
Ga0182168_103640513300015312Switchgrass PhyllosphereIWSASYTSLAMLSSNSKGKTLCPRSMAPDRGPLQQSYLKQVVPPEAIIINNSWSTKIKEIKRIKKSRASIAPGVVNHQQTKLPGLNKTVITIAVKIGRK*
Ga0182168_105340913300015312Switchgrass PhyllosphereMAPGQGPPQQSYLKQVILLEAIIVNNSWSSKIKETRRIRKLQASIAPGEANLQQTKPLGLNQAATTTAGTTGRR*
Ga0182168_112085023300015312Switchgrass PhyllosphereMVHGQGPRQQSYIRQAVLLEAIIVTSSRSSKIKEIKRIKKSLVAISPGVANNWQTKPLGLNQIATTTTAGTTGKR*
Ga0182164_101149013300015313Switchgrass PhyllosphereMAPDQGPLQQSYLKQVVPLEAITVNNSWNSKTKETNRIRKSQAFIVLGVANHQKTKLLGLNRTATTIAVKTGRK*
Ga0182164_113824913300015313Switchgrass PhyllospherePRFMALGQGPPQHSYLKQAVLLEAIVVNNCRSSKIKEIKRIKKSQASIALGVANHRQTKLLGLSQIATTTTADTIGRK*
Ga0182121_105417823300015316Switchgrass PhyllosphereMLLNNSRDKTRCPHSMAPGQGPLQQSYLKQVALLEAIIANNSWSSKTKETRRIRKLQVFIDPGVANRRQTKPLGLSQIATATTAGTTGKR*
Ga0182136_110756723300015317Switchgrass PhyllosphereMLFNKWRDKTLCPHFMAPGRGLPQQLYLKQVVPPEAIIVNNSRSTKTKEIKRIRKSQASIVLGVANHLQTKLLGLSQIATTTVAITGRK*
Ga0182181_107617813300015318Switchgrass PhyllosphereKTHCLHFMAPGQGPPQQLYLKQAVHPEAITVSNSWNNKIKETKRIRKLQAIIAPGVANHQQTKLLDLN*
Ga0182130_104489123300015319Switchgrass PhyllosphereMAHDRGLPQQSYLKQVALLEAIIANNSWSSKIKETRRIRKLQVTIDPGVANHRQTKLLGLSQIATTTTADTIGRK*
Ga0182165_114789413300015320Switchgrass PhyllosphereMAPGQGPRQQLYLKQAVLLEAIIVTSSRSSKIKEIKRMKKSLVAISPGVANNWQTKPLGLNQIATTTTAATTGKR*
Ga0182134_101158913300015324Switchgrass PhyllosphereMAPGRGPPQQSYLKQVLLLGAIIANNSWSSKIKETRRIRKSQATINPGVANHRQTKLLGLSQIATTTTTGTIGKR*
Ga0182166_105261513300015326Switchgrass PhyllosphereMAPGRGLPQQSYLKQVEPPDAIIVNNSWRSKTKETKRIRMSQASITPGVANHQQTKLLGLNQVATTTTTDIIGRKLP
Ga0182114_112505413300015327Switchgrass PhyllosphereMAPARGPLQQSYLKQVVPPDGIIVNNSWSSKTKETKRIRKLQAFITPGVVSHQQTKLLGLNRIATTIAAKIGRK*
Ga0182114_115914513300015327Switchgrass PhyllosphereMVQGQELPQQSYLRKAVLPEATIVNNSRSSTFKEIKRIKKSQASIAPEVANHQQTKLLGPNQVATTTALTTGKK*
Ga0182153_102783823300015328Switchgrass PhyllosphereMAPGRGPLQQSYLKQAVHPEAITDNNSQSDKIKETKRIRKSQASIAPGVANHRQTKLSGLNQVATTAGTIGKK*
Ga0182135_108351723300015329Switchgrass PhyllosphereMVHVQGPRQQSYLKQAAPPEDIIVNNSCSSKIKEIKRIRKSRAAITTGVANSQQIKPLGLSQIATTTTAGITRRR*
Ga0182135_109795823300015329Switchgrass PhyllosphereMVQGQGRLQQLYLRQAELPEATIVNNSWSSKFKEIKRIKKSQAAIAPGVAYSRQTKPLGLNQIATTTTAGTTRKR*
Ga0182131_106193423300015331Switchgrass PhyllosphereMVHGQGPLQQSYLRQAVLPEAIIVNNSWSSKIKEIKRIRKSRAAITTGVANSLQTKPLGLSQIATTTTAGTTGKR*
Ga0182131_110216513300015331Switchgrass PhyllosphereMLLNSSRNKTRCPHFIAPGRGPPQQSYLKQVVPPEDITDNNSWSIKIKETGMIKKLQAPIALEVANHRQIKLLGLSQISTTTIAGKTGKK*
Ga0182131_112772713300015331Switchgrass PhyllosphereYLKQVALLEAIIASNSWSSKIKETRRIIKLQVTIDPGVANHRQTKLLGLSQITTTTVGTTERK*
Ga0182131_112880013300015331Switchgrass PhyllospherePGREPPLQSYLKQVVLLEAILINNSWSSKIKETRRIRKSQAFIDPGVANHWQTKPLGLSQIATTTTAGTTGKRLSIP*
Ga0182117_103244123300015332Switchgrass PhyllosphereMAPGRGPLQQSYLKQSVPPEAITDNNSQSSKTREIKRIKKLQVSIVLGVANHQQIKLLGLNRIATT
Ga0182117_111882613300015332Switchgrass PhyllosphereMLSSNSKGKTLCPRSMAPDRGPLQQSYLKQVVPPEDITDNNSWSIKIKETKRIKKSQVPITPGVANHQQTKLQGLN*
Ga0182117_114205813300015332Switchgrass PhyllosphereMAPGRGPLQQSYLKQDVPPEAITDDNSWSIKIKETKMIKKLQVPIALEVANHRQIKLLGLS*
Ga0182117_116577413300015332Switchgrass PhyllosphereMAHGRGQPQQTYIKQVALLEAIIANNSWSSKIKETRRIRKLQVTIDPGQTKPLGLSQIATTTTAGATGRK*
Ga0182147_106915713300015333Switchgrass PhyllosphereTLPRMLLNKSRDKTRCLHLMAPGRGPLQQSYLKQAVPPETINDDNSWSIKIKETKMIKKLQVPIALEVANHRQIKLLGLSQVATTTTTGTTGKK*
Ga0182147_111660623300015333Switchgrass PhyllosphereMASGRGPPQQSHLKQVVLLEAIIVNNSWSSKTKETRRIRKLQAFIDPEVANHRQTKALGLSQIATTTTAGTIGKR*
Ga0182132_104651623300015334Switchgrass PhyllosphereMAPDRGPPQQSYLKQVVLLEAIIVNNSWSSKTKETRRIRKMQAFINPGVANHQQTKLLGLNRIATTIAAKTGKK*
Ga0182116_108184123300015335Switchgrass PhyllosphereMALDRRPPQQSYLKQAVLLEAIIVNNSWSSKIKEIKRIKKSQASIAPGVANHWQTKLLGPNQVATTTAPTTGKK*
Ga0182150_110949123300015336Switchgrass PhyllosphereMAPGLGPLQQSYLKQAVLPEATIANNTWSSKIKESGRIRKSQASIDPGVANHRQTKPLGLNQIATTTTAGTIGKR*
Ga0182151_115272213300015337Switchgrass PhyllosphereKQVALREAINDNNSWRSKIKETRRIKKLQVTIDPGQTKPLGLSQTATTITAGATEKR*
Ga0182151_116543113300015337Switchgrass PhyllosphereSKDKIRCLHFTAPGREPPQQSYLKQALPSEAVTDNNSWSNKIKKFKRIRKSQGSIAPEVANHRQTKILGLNQVATTITGTTGRK*
Ga0182137_113222413300015338Switchgrass PhyllosphereMLLNNSRDKTRCPRFTTLGRGPLQQSYLKQAVLLEAIIINNSWSSKIKEIKWIKKSQASITPEVANHRQTKLLGPNQVATTTAPTTGKK*
Ga0182137_114175513300015338Switchgrass PhyllosphereMALGPRQLQQSYLKQVVPPGAIIVNSKTKETKRIRKSQAVIAPGVVNHQQTKLLGLNRTATTIAAKTGRK*
Ga0182137_115003113300015338Switchgrass PhyllosphereMAPGQGPSQQSYLRQVILPEATIVNNSWSSKIKETRRIRKLQATIDPGVANHLQTKLLGLSQIATTTTAGTIGKR*
Ga0182149_114536223300015339Switchgrass PhyllosphereMAPDRGPPQQPYLKQAVLLEAIIVNNSWSSKIKEIKRIKKLQATIAPGVANRRQTKLLGPNQVATTTAPTIGKK*
Ga0182133_116986013300015340Switchgrass PhyllosphereMAPGRGPLQQSYLKQVALLEAITDNNSWRSKIKETRRIKKLQVTIDPGQTKPLGLSQIATTTTAGATGRK*
Ga0182115_121500123300015348Switchgrass PhyllosphereMAPGQGQLQQSYLKQVALREAINDNNSWRSKIKETRRIKKLQVTIDPGQTKPLGLSQIATTTTTAGAIGRK*
Ga0182115_121796423300015348Switchgrass PhyllosphereYLKQAIHPEAITDNNSQIDKIKEIKRVRKSQASIAPGVANHWQTKLSGLNQVATTAGTIGKK*
Ga0182115_126065123300015348Switchgrass PhyllosphereMVPGRGPLQQLYLKQAVLPEAITDNNSWSIKIKETKRIKKSEVPIAPGVANHRQIKLLGLAATTTTAGTTGRK*
Ga0182115_127458723300015348Switchgrass PhyllosphereMALDRRPPQQSYLKQAVLLEAIIVNNSRSNKIKEIKRIKKSQASIVPGVTNYRQTKLLGPNQVATTTAPTTGKK*
Ga0182185_106912923300015349Switchgrass PhyllosphereMAPGREPPLQSYLKQVVLLEAIIVNNSWSSKIKETRRIRKSQASIDPGVANHRRTKPLGLSQIATTITTGTTGKR*
Ga0182185_110085033300015349Switchgrass PhyllosphereMAPGRGSPQQSYLKQAVLLEAIIVNNSWSTKIKEIKRIKKSQASIAPGVANHQQTKLLGPNQVTTTTAPTTGKK*
Ga0182185_117067823300015349Switchgrass PhyllosphereMAPGRGPPQQSYLKQDVPPEAITDNNSWSIKIKETGMIKKLQAPIALEVANHWQIKLLGLSQIATTTTAGTTGKK*
Ga0182169_112938223300015352Switchgrass PhyllosphereMAPGQGPPQQSYLKQAVPPEAITINNSWNNKIKETRRIRKSQATINPGVANHWQIKLLGLSQIATTTTAGTTGKS*
Ga0182169_116621423300015352Switchgrass PhyllosphereMAPDLRPLQQSYLKQVVPLEAITVNNSWRSKIKETKKTRKSQAATIPGADNDQQPKLQSLNRTVTTTAAVTSKK*
Ga0182169_122993013300015352Switchgrass PhyllosphereMLPSSLRDKILCPRFMAPDRGPLQQSYLKEVVPLEAIIVNNNWNSKTKETKRIRKSQATIAPGAASHQLTKPLGCSQTATTTTEKK*
Ga0182169_126118913300015352Switchgrass PhyllosphereMLLNNSRDKTHCPHFMVHGQRLRQQSYLRQAVLLEVTIDNNSRSNKFKEIKRIKKPRAAIALGVANSRQTRPLGLNQITTTTTAGTIGKR*
Ga0182169_129572723300015352Switchgrass PhyllosphereMALSRGPPQRSYLKQAVLLEAIIINNSRSSKIKEIKRIKKSQASIALGVANHRQTKLLGPNQVATTTA
Ga0182169_130040113300015352Switchgrass PhyllosphereRRWNVSYITLKMLLNNSKDKICCLHFTAPGREPPQQSYLKQALPSEAVTDNNSWSNKIKKFKRIRKSQGSIAPEVANHRQTKILGLNQVATTIAGTTGRK*
Ga0182179_105376323300015353Switchgrass PhyllosphereMAPSRELPQQSYLKQAVPPEAITDNNSWSNKIKETKRIRMSQASITPGVANHQQTKLLGLNQVATTTTTDTIGRKLPIP*
Ga0182179_114867723300015353Switchgrass PhyllosphereGRGPLQQSYLKQAVPPEAITVNNSWSNKIKEFKRIRKSQASIAPGVSNHQQTKLLGLNQVTTTIAGTIGRK*
Ga0182179_131365313300015353Switchgrass PhyllosphereMAPARGPLQQSYLKQVVPPEAIIVNNNWSSKTKETKKLRKLQAFIAPGVVNHQQTKLLGLNLIATTIAAKTERK*
Ga0182167_119621523300015354Switchgrass PhyllosphereMAPDRGPLQQSYLKQVVPPEAVIVNNSWRSKTKETKRIRKSQAFIAPGVVNHQQTKLPGLNKTVITIAVKIGRK*
Ga0182167_128690813300015354Switchgrass PhyllosphereMVQGQGRLQQSYLRQAELPEATIVNNSWSSKIKEIKRIRKLQVTIDPGVANHRQTKLLGLSQIATTTTVGTTGTK*
Ga0182167_132047613300015354Switchgrass PhyllosphereMLLNNLKDKIRCFHSTAPGREPPQQSYLKQAVPPEAVTDNNSWSNKIKETKRTRKSQASTAPGVANHRQTKLLGLNRIATTTAAKTGKK*
Ga0182199_111612433300017412Switchgrass PhyllosphereMAPGQGLQQQLYLKQAVLLEAIIITSSRISKIKEIKRIKKSRVAIAPGVANNRQTKPLGLNQIAT
Ga0182201_111630013300017422Switchgrass PhyllosphereMAPARGPLQQSYLKQVVPPDGIIVNNSWSSKTKETKRIRKLQAFITPGVVSHQQTKFLVLNRITTTTTAKIGRTQPIP
Ga0182196_109026013300017432Switchgrass PhyllosphereKTCCLRFMAHGQGLPQQSYLRQAILPEAIIVNNSRSSKIKGIKKIRKLQAAIAPGVTNHRQTKPLGLSQTATTITAGTTGKR
Ga0182196_113858213300017432Switchgrass PhyllosphereSRDKTPCPHFMAPSQGLPQQSYLKQVVPLEAIIVNNSWSSKTKETKKLQAFNAPGVVNHQQTKLPGLNKTVITITVKIGRK
Ga0182200_109521823300017439Switchgrass PhyllosphereMAPGQGQLQQSYLKQVALREAINDNNSWRSKIKETRRIKKLQVTIDPGQTKPLGLSQIATTTTAGATGRK
Ga0182200_116268213300017439Switchgrass PhyllosphereVQRPLQQSYLKQAVLPEDIIANNSYNSKIKEIKRIRKSRASIAPGVANHQQTKLLGLNRTATTTVVKTPKKLPIP
Ga0182198_113783423300017445Switchgrass PhyllosphereMAPGQGPRQQLYLKQAVLLEAIIVTSSRSNKIKEIKRIKKSLVSIAPGVANNQQTKPLGLNQIATQTTAGTTGRR
Ga0182217_113369913300017446Switchgrass PhyllosphereMAPGQGPLQQSYLKQVALLEAITDNNSWRSKIKETRRIKKLQVTIDPGQTKLLGLSQIATTTTAGTIGKR
Ga0182212_110655213300017691Switchgrass PhyllosphereMLFNKLRDKTLCPHFMAPGRGLPQQLYLKQVVPPEAIIVNNSRSTKTKEIKRIKKSQASIAPGVANHRQTKLLGLNQVAITIAGTTGRK
Ga0182211_114825123300017694Switchgrass PhyllosphereLSSNLRDKILCPCSMAPDQGPLQQSYLKQVVPLEAITVNNSWNSKTKETKRIRKSQAFIVLGVANHQKTKLLGLNRTATTIAVKTGRK
Ga0207658_1189867223300025986Switchgrass RhizosphereCPHFMALGRGPPQQSYLKQAVLLEAIIVNNNWSSKIKEIKRIKKSQASIAPGVANHQQTKLLGLNQIATTIAVKTGRK
Ga0207676_1246542523300026095Switchgrass RhizosphereMVHGQGPQQQSYLRQAVLLEVTIDNNSRSNKFKEIKRIKKPRAAIALGVANSRQTRPLGLSQITTTTTTGTTGKR
Ga0268346_104239713300028053PhyllosphereISSPAAPGLTYTLPKMLLNNLKDKIRCFHSTAPGREPPQQSYLKQAVPPEAVTDNNIWSNKIKETKRTRKSQASTAPGVANHRQTKLLGLNQVAITIAGTTGRK
Ga0268315_102138313300028472PhyllosphereCPHFMALGRGPPQQSYLKQAVLLEAIIVNNSWSSKIKEIKRIKKSQASIAPGVANRRQTKLLGPNQVATTTAPTIGKK
Ga0314759_120022413300033535Switchgrass PhyllosphereMAPGQGQLQQSYLKQVALREAINDNNSWRSKIKETRRIKKLQVTIDPGQTKPLGLSQIATTTTTAGAIGRK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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