Metagenome / Metatranscriptome Family F100239

Basic Information
Family ID	F100239
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	58 residues
Representative Sequence	MQPLDDFGRSAVADLDNIIDMIAHGHKQVEKQFAPILHFHLHGSAPLESLATSNDQS
Number of Associated Samples	80
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (71.569 % of family members)
Environment Ontology (ENVO)	Unclassified (55.882 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (78.431 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.35% β-sheet: 0.00% Coil/Unstructured: 57.65%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00651	BTB	1.96

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.10%
Host-Associated	Host-Associated	4.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.16%
Aquatic	Environmental → Aquatic	2.94%
Human	Host-Associated → Human	2.94%
Plants	Host-Associated → Plants	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.16%
Digestive System	Host-Associated → Human → Digestive System	2.94%
Freshwater	Environmental → Aquatic → Freshwater	1.96%
Marine	Environmental → Aquatic → Marine	0.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.16%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	2.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	77.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.75%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	71.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.90%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	2.94%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.96%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.98%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003693	Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300009411	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_OS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010088	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010100	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010870	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010872	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (version 5)	Environmental	Open in IMG/M
3300010874	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (version 3)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018509	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_100 - TARA_N000001642 (ERX1782430-ERR1711958)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300028554	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (v9)	Environmental	Open in IMG/M
3300030535	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO749-VDE026SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030547	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db9 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030551	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030565	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030576	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb9 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030578	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO105-VCO054SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030590	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb8 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030604	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030607	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030615	Metatranscriptome of plant litter fungal communities from Pinus contorta in Bitterroot National Forest, Montana, United States - GP1-LITTER (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300030628	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb6 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030635	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030652	Metatranscriptome of decayed wood fungal communities from Pinus contorta in Bitterroot National Forest, Montana, United States - GP1-2E (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030774	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Wood GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030779	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030784	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 6A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030790	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_OS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030852	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030858	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030861	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 4C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030866	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030867	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 2C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030922	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_OS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030931	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Litter TCEFB (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030935	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030944	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Wood GP-2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030946	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030949	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus C3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030981	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 4C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030992	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Litter N3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030995	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Wood GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031008	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Litter N1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031009	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - LB 10 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031013	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 4A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031014	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031021	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031029	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Wood TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031030	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus C2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031031	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Litter C2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031035	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus N1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031064	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 3C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031089	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 2B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031116	Metatranscriptome of forest soil fungal communities from Los Alamos, New Mexico, United States - Jemez Pines Pi 5A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031411	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032169	Metatranscriptome of plant litter fungal communities from Pinus contorta in Bitterroot National Forest, Montana, United States - GP2-LITTER (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0032354_11448171	3300003693	Avena Fatua Rhizosphere	MDDTQPHLDDLGRAAVADLDNVVDMIAHGHKQVEKQFAPILHLHLHGSAPLESLATSNDQSKVMSAES*F
Ga0115017_10177561	3300009411	Soil	MQPLDDFGRSAIADLDNVVDMIAHGHKQVEKQFASILHFHLHSSAPLESLATSNDQS
Ga0115017_10334281	3300009411	Soil	MAPPSDDFRGSAIADLNDVIDVVAHSNEQIEKQFTPFLHFHLHS
Ga0127476_10844532	3300010088	Grasslands Soil	MKTQCDYLDNLGRPAIADLDNVIDMVAHRDKQIEKQFATNLHLHLHGSAPLESLTTSNDQG*
Ga0127440_10354361	3300010100	Grasslands Soil	VVYVPSLDDFGRAAVANLDNVIDMIAHGHKQIEKQFAPILHLHLHGSAPLESLATPDDQS
Ga0126320_13340562	3300010146	Soil	MGMIQPLDDLGRTAIADLDNVVDMIAHGHKQVEKQFAPILHFHLHGSTPLESLATSNDQSQVMSA
Ga0126358_10894761	3300010856	Boreal Forest Soil	VSSLDDFGRSTIANLDNVVDMIAHSHKQIEKQFAPILHLHLHGSAPLESLATPDDQSKV
Ga0102750_108678871	3300010870	Soil	LWLSGDHLDNFGGSSVADLDNVIDMIAHCHKQIEEQFAPFLHFHLHGSAPLESLATSDDQSK
Ga0136897_109524791	3300010872	Soil	LSGDHLDNFGGSSVADLDNVIDMIAHCHKQIEEQFAPFLHFHLHGSA
Ga0136897_112458851	3300010872	Soil	MWSIYNLLDDFGRTAVANLNNVINVIAHGHKQIEKQFAPFLHLHLHGSAPLESLATSDDQSKVMSAEA*
Ga0136264_102222261	3300010874	Soil	VRPLDDFGRPAIADLDNVIDVIAHCHKQVEKQFAPILHFHLHGSAPLESLATSNDQSQ
Ga0136264_102618801	3300010874	Soil	MSSLDDFGRSAIANLDNVIDMIAHSHEQIEKQFAPILHLHLHGSAPLESLAT
Ga0136264_103093142	3300010874	Soil	VQPLDDFGRSAIADLDNVVDMIAHGHKQVEKQFASILHFHLHSSAPLESLATSNDQSQ
Ga0150985_1069960121	3300012212	Avena Fatua Rhizosphere	MIQPLDDLGRAAIADLDNVVDMIAHGHKKVKKQFAPILHFHLHGSAPLESLATS
Ga0134022_10444961	3300012371	Grasslands Soil	MKSSLPNLDNVIDMIAHGHKQIEKQFAPILHLHQQGCAPVESLASADDQGKGVSAKPRLR
Ga0134047_11439541	3300012380	Grasslands Soil	VYNQHLDDFGGSVVTDLDNIIDVVAHCYEKIEEQFAPILHFHLHGSAPLESLATSDDQSKIMSAET*
Ga0134040_11777431	3300012389	Grasslands Soil	MDDTQPHLDDLGRAAVADLDNVIDMVAHRDKQIEKQFATNLHLHLHGSAPLESLTTSDDQS*
Ga0134060_12670481	3300012410	Grasslands Soil	VVYVPSLDDFGRAAVANLDNVIDMIAHGHKQIEKQFAPILHLHLHGSAPLESLTTP
Ga0192995_1011851	3300018509	Marine	VVDESLDDFGRTAVADLDNVIDVIAHGHKQVEEQFASMLHFLLHGSTPLK
Ga0206352_102044161	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MDDTQPHLDDLGRAAVADLDNVVDMIAHGHKQVEKQFAPILHLHLHGSAPLESLTTSNDQ
Ga0302047_100596231	3300028554	Soil	MSSLDDFGRSAIANLDNVIDMIAHSHEQIEKQFAPILHLHLHGSAPLESLATSDD
Ga0302047_105677431	3300028554	Soil	MWSIYNLLDDFGRTAVANLNNVINVIAHGHKQIEKQFAPFLHLHLHGSAPLESLATSD
Ga0210285_13742211	3300030535	Soil	VVELRSLDDFGRSAIADFDNVIDVIAHRHEQIEKQFAPILHFHLHG
Ga0247656_10227011	3300030547	Soil	MLRGRQPLDDLGRPAVADLHNIIDVVAHGHEQIEKQFATILHLHLHGSAPLERLTTSDDQ
Ga0247638_11355521	3300030551	Soil	MKTQCNYLDNLGRPAIADLDNVIDMVAHRDKQIEKQFATNLHLHLHGSAPLESLTTSNDQ
Ga0247635_11890321	3300030565	Soil	MKTQCNCLDNLGRPAIADLDNIIDMVAHSDKQIEKQFATNLHLHLHGSAPLESLTTSNDQ
Ga0247644_11543961	3300030576	Soil	MGVQPLDELGRSAVADLDNIINVVAHGHEQIKVQFATILHLHLHGSAPLE
Ga0210275_101767861	3300030578	Soil	MQPLDDFGRPAVADLDNVIDVIAHRHKQVEKQFAPILHFHLHSSAPLESLATSNDQSQVMSAESRLCVR
Ga0210275_103263401	3300030578	Soil	MQPLDDFGRSAIADLDNVVDMIAHGHKQVEKQFASILHFHLHSSAPLESLATSNDQSQVMSAESRLCVR
Ga0247643_10827151	3300030590	Soil	MDDTQPHLDDLGRAAVADLDNVVDMIAHGHKQVEKQFAPILHLHLHGSAPL
Ga0247637_10438362	3300030604	Soil	MIQPLDDLGRAAIADLDNVVDMIAHGHKKVEKQFAPILHFHLHGSAPLESLATSNDESKVMSAES
Ga0247615_102386951	3300030607	Soil	MIQPLDDLGRAAIADLDNVVDMIAHGHKKVKKQFAPILHFHLHGSAPLESLATSNDQSK
Ga0257185_101836251	3300030615	Host-Associated	VRSLDDFGRSAVADLHNVIDVIAHRHKKVEKQFTPFLHFLLHSTAPLESLATSDDQ
Ga0247629_102793351	3300030628	Soil	MIQPLDDFGRAAIADLDNVVDMIAHGHKKVEKQFAPILHFHLHGSAPLESLATSNDESKVMS
Ga0247627_101052622	3300030635	Soil	MKTQCDYLDNLGRPAIADLDNVIDMVAHRDKQIEKQFATNLHLHLHGSAPLESLTTSNDQ
Ga0257183_10427271	3300030652	Host-Associated	MQTLDDLRRAAVADLDNVIDVIAHGHKQVEKQFAPILHFHLHGSA
Ga0265461_116544611	3300030743	Soil	MQPLDDFGRSAIADLDNVVDMIAHGHKQVEKQFASILHFHLHSSAPLESLATSNDQSQVMSAESRLCVRRVFVR
Ga0265461_123877381	3300030743	Soil	MQPLDDFGRPDLDNVIDVIAHRHKQVEKQFAPILHFHLHSSAPLESLATSNDQ
Ga0074007_100824972	3300030774	Soil	MQPLDDFGRSAVADLDNIIDMIAHGHKQVEKQFAPILHFHLHGSAPLESLATSNDQS
Ga0075378_100436331	3300030779	Soil	MRIFLDNFGRSAIADLDDVIDMIAHRHKQIEKQFAPILHFHLHGSAPLESL
Ga0075378_100513701	3300030779	Soil	MQPLDDFGRSAIADLDNVVDMIAHGHKQVEKQFASILHFHLHSSAPLESLATSNDQSQ
Ga0075378_110437671	3300030779	Soil	VVELRSLDDFGRSAIADFDNVINVIAHRHEQIEKQFAPILHFHLHGSAPLESLATSDDQ
Ga0102758_100684711	3300030784	Soil	MCARLDNLGRSAVADLHYVIDVVAHCHEQVEKQFTPFLHFHLHSSAPFESLATSDDQSQVMSAETRFCVRSVLVSISCRAQNHIDLD
Ga0102758_110327581	3300030784	Soil	MQVLCRSLLDDLGGAAVADLHNVINVIAHSHKQIEKQFATILHLHLHGAAPLESLATSDDQG
Ga0102757_100471832	3300030785	Soil	MSDNFGGSSIADLDNVIDVIAHCHKQIEKQFAPSLHFHLHGSAPLESLATSDDQ
Ga0138304_12452371	3300030790	Soil	MRPLDDFGRSAIADLDNVVDMIAHGHKQVEKQFASILHFHLHSSAPLESLATSNDQSQVMSAESRLC
Ga0308203_10918331	3300030829	Soil	VPSLDDFGRSTVANLDNIIDVITHSHKQIEKQFAPILHLHLHGSAPLESL
Ga0075388_100138711	3300030848	Soil	MQPLDDFGRPAVADLDNVIDVIAHRHKEVEKQFAPILHFHLHGSAPLESLATSNDQSQ
Ga0075389_114885092	3300030852	Soil	MWCIHVPSLDDFGRTAVADLDNVIDVIAHGHKQIEEQFAPFLHFHLHGSAPLESLAT
Ga0102759_10316501	3300030858	Soil	MQTSDDLWRAAVADLDNVIDMIAHGHKQVEKQFAPILHFHLHGSAPLESLATSNDQSQVMSA
Ga0102759_19738661	3300030858	Soil	MQPLDDFGRPAVADLDNVVNVVAHSHKQVEEQFAPILHFHLHGSAPLKSLATSNDQ
Ga0102755_14071872	3300030861	Soil	MVEMRIFSDDLGRSAVADLDDVIDMITHRHKQIEKQFAPILHLHLHGSAPLESLATP
Ga0102744_10170301	3300030866	Soil	MXDARSLDDLGRSAVADLHNVIDMIAHGHKQIEKQFTPFLHFGLHSTAPLEGLATSDDQGKVMSAETRLGVRSVF
Ga0102744_10264291	3300030866	Soil	MKPLDDFGRSAIADLDNVIDMIAHGHKQVEEQFASILHLHLHSSTPLESLATSNDQSQ
Ga0102744_18747761	3300030866	Soil	MAPSRRVXMXEVRSLDDFGRSAVADLHNVIDVIAHRHKKVEKQFTTFLHFLLHSTAPLESLATSDDQSKVMSA
Ga0102744_18772952	3300030866	Soil	MWSIYNLLDDFGRTAVANLNNVINVIAHGHKQIEKQFAPFLHLHLHGSAPLESLATSDDQSKVMSAE
Ga0102749_14730911	3300030867	Soil	MKYDRLDDLGRSAIANFDNIIDVVAHRHEQIEKQFTPFLHFHLHGSAPLESLATSDDQSK
Ga0308200_10817531	3300030905	Soil	MLNCKTTCASLDDFGRSAVADLDNVIDMIAHSHKQIEKQFAPILHLHLHGSAPLESLATSDDQRE
Ga0138300_10899081	3300030922	Soil	MQPLDDFGRPADLDNVIDVIAHRHKQVEKQFAPILHFHLHSSAPLESLATSNDQSQVMSAESRLCVRC
Ga0074006_113355881	3300030931	Soil	MLHDNLDDFGRPAIADLDNIIDVVAHCDKQIEEQFATILHFLLHGSAPLESLATSDDQSKIMSA
Ga0075401_119583881	3300030935	Soil	MRIFLDNFGRSAIADLDDVIDMIAHRHKQIEKQFAPILHFHLHGSAPLESLATSDDQC
Ga0075401_119927861	3300030935	Soil	MQPLDDFGRSAVADLDNVIDMIAHSHKQVEKQFAPILHFHLHGSAPLESL
Ga0074009_100565761	3300030944	Soil	VPSLDDFGRSTIAYLDNVIDMIAHSHKQIEKQFAPILHLHLHGSAPLESLATPD
Ga0075379_100343271	3300030946	Soil	MQPLDDFGRPAVADLDNVIDVIAHRHKEVEKQFAPILHFHLHGSAPLESLATSNDQSQVM
Ga0075379_115214981	3300030946	Soil	MRIFLDNFGRSAIADLDDVIDMIAHRHKQIEKQFAPILHFHLHGSAPLESLA
Ga0074031_11393931	3300030949	Soil	MKVVEMRSLDDFGRPAIADFDNVIDVIAHRHEQIEKQFAPILHFHLHGSAPLESL
Ga0075383_113608121	3300030966	Soil	MWCIHVPSLDDFGRTAVADLDNVIDVIAHGHKQIEEQFAPFLHFHLHGSAPLESLATSDD
Ga0102770_112740431	3300030981	Soil	VRSLDDFGRSAVADLHNVIDVIAHRHKKVEKQFTTFLHFLLHSTAPLESLATSDDQSKVMSAETRLCVRSVFICI
Ga0074040_100298311	3300030992	Soil	MQPSNDLRRAAVADLDNVIDMIAHGHKQVEKQFAPILHFHLHGSAPLESLATSNDQS
Ga0074011_10640071	3300030995	Soil	MPSLDDFGRSTVANLDNVIDMIAHSHEQIEKQFAPILHLHLHGS
Ga0073997_100384951	3300030997	Soil	MWLRCESLDNFGGSAIADLDDVVDVITHRHKQIEKQFAPILHFHLHGSAPLESLATSDDQ
Ga0073996_118078281	3300030998	Soil	VRSSDDFGRSAVADLHNVIDVIAHRHKKVEKQFTPLLHFLLHSTAPLECLA
Ga0074038_100575001	3300031008	Soil	MRSLDDFGRPAIADFDNVIDVIAHRHEQIEKQFAPILHFHLHGS
Ga0074022_10276951	3300031009	Soil	MQTLDDLRRAAVADLDNVIDVIAHGHKQVEKQFAPILHFHLHGSAPLESLATSNDQS
Ga0102753_10041821	3300031013	Soil	MQTSDDLWRAAVADLDNVIDMIAHGHKQVEKQFAPILHFHLHGSAPLESLATS
Ga0102756_10654631	3300031014	Soil	MQTSDDLWRAAVADLDNVIDMIAHGHKQVEKQFAPILHFHLHGSAPLESL
Ga0102756_15039831	3300031014	Soil	MVEMRIFSDDLGRSAVADLDDVIDMITHRHKQIEKQFAPILHLHLHGSA
Ga0138298_14719351	3300031015	Soil	MIQPLDDLGRAAIADLDNVVDMIAHGHKKVKKQFAPILHFHLHGSAPLESLATSNDQS
Ga0102765_112936071	3300031021	Soil	MYARLDNLGRPAVADLHDVIDVVAHCHEQIEKQFTPFLHFHLHSSAPFESLATSDDQSQVMSAE
Ga0074012_100024181	3300031029	Soil	MPSSDDFGGSAIANLHNVIDMIAHSHEQIEKQFAPILHLHLHGSAPLESLATSDDQS
Ga0074030_110469111	3300031030	Soil	MKVVEMRSLDDFGRPAIADFNNVIDVITHRHEQIEKQFAPILHFHLHGSA
Ga0074042_112986571	3300031031	Soil	MQPLDNLGGSAVADFHNVIDMIAHSHKQVKEQFTPFLHFHLHGSAPLESLTTSDDQ
Ga0074026_112544091	3300031035	Soil	MQPLDDFGRPAVADLDNVIDMIAHRHKQVEKQFAPILHLHLHGSAPLESLAT
Ga0102767_113730812	3300031064	Soil	MRPLDDFGRSAIADFHNVINVVAHGHKQVEKQFPPVLHFHLHGSTPLESLATSNDQ
Ga0102748_100292161	3300031089	Soil	MQPSDDLWRAAVADLDNVIDMIAHGHKQVEKQFAPILHFHLHGSAPLESLATSN
Ga0102748_100946571	3300031089	Soil	VRSLDDFGRSAVADLHNVIDMIAHCHKQIEKQFTPFLHFVLHSTAPLEGLATSDDQGKVM
Ga0102748_117297691	3300031089	Soil	MPSLDDLGRSAIANFDDVIDMIAHSHEQIEKQFAPIFHLHLHGSTPLESLATSDDQSQVMSAE
Ga0308197_102440271	3300031093	Soil	MLNCKTTCASLDDFGRSAVADLDNVIDMIAHSHKQIEKQFAPILHLHLHGSAPL
Ga0308199_11306741	3300031094	Soil	VPSLDDFGRSTVANLDNVIDVIAHSHKQIEKQFAPILHLHLHGSAPLESLAT
Ga0318490_10267431	3300031116	Soil	MQTSDDLWRAAVADLDNVIDMIAHGHKQVEKQFAPILHFHLHGSAPLESLATSNDQSQVMSAES
Ga0170822_101579951	3300031122	Forest Soil	VVELRSLDDFGRSAIADFDNVINVIAHRHEQIEKQFAPILHFHLHGSAPLESLATSDDQC
Ga0170822_158812202	3300031122	Forest Soil	MWCIHVPSLDDFGRTAVADLDNVIDVIAHGHKQIEEQFAPFLHFHLHGS
Ga0170823_162982741	3300031128	Forest Soil	MQPLDDFGRPAVADLDNVIDVIAHRHKEVEKQFAPILHFHLHGSAPLESLATSNDQSQVMSAESRLCV
Ga0102761_102431541	3300031411	Soil	LSGDHLDNFGGSSVADLDNVIDMIAHCHKQIEEQFAPFLHFHLHGSAPLESLAT
Ga0102761_127590252	3300031411	Soil	MQSLDDLGRPAVADLDNVIDMVAHCHKKVEKQFAPILHFHLHGSAPLESLATSNDQS
Ga0308194_102912821	3300031421	Soil	VPSLDDFGRSTVANLDNVIDVIAHSHKQIEKQFAPILHLHLHGSAP
Ga0170818_1133087141	3300031474	Forest Soil	MWCIHVPSLDDFGRTAVADLDNVIDVIAHGHKQIEEQFAPFLHFHLHGSAPLESLATSDDQCQVMS
Ga0257195_102841441	3300032169	Host-Associated	MPSSDDFGGSAIANLDNVIDMIAHSHEQIEKQFAPILHLHLHGSAPL
Ga0315742_126268371	3300032756	Forest Soil	MKVVEMRSLDDFGRPAIADFDNVIDVIAHRHEQIEKQFAPTLHFHLHG
Ga0315742_126824231	3300032756	Forest Soil	MQPSNDLRRAAVADLDNVIDVIAHGHKQVEKQFAPILHFHLHGSAPLESLATSNDQSQ
Ga0314796_100640_324_560	3300034671	Soil	MIQPLDDLGRAAIADLDNVVDMIAHGHKKVEKQFAPILHFHLHGSAPLESLATSDDQSKVMSAEPRFRVRRVFIRVPS
Ga0314798_108629_387_584	3300034673	Soil	MIQPLDDLGRAAIADLDNVVDMIAHGHKKVEKQFAPILHFHLHGSAPLESLATSNDQSKVMSAES

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100239

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign