Metagenome / Metatranscriptome Family F100338

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F100338
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	59 residues
Representative Sequence	MEKSLRYRVNVSTSVKGVKTWDCTVDGDNMEMEEVLKRSDELVAELERRYPPQIEGK
Number of Associated Samples	35
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	94.12 %
% of genes near scaffold ends (potentially truncated)	7.84 %
% of genes from short scaffolds (< 2000 bps)	73.53 %
Associated GOLD sequencing projects	35
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (63.725 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater (38.235 % of family members)
Environment Ontology (ENVO)	Unclassified (41.176 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (73.529 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.18% β-sheet: 23.53% Coil/Unstructured: 55.29%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00436	SSB	12.75
PF13392	HNH_3	2.94
PF09643	YopX	2.94
PF01381	HTH_3	2.94
PF04404	ERF	2.94
PF05063	MT-A70	2.94
PF00805	Pentapeptide	1.96
PF00149	Metallophos	0.98
PF01870	Hjc	0.98
PF03237	Terminase_6N	0.98
PF12728	HTH_17	0.98
PF02195	ParBc	0.98
PF02650	HTH_WhiA	0.98
PF13715	CarbopepD_reg_2	0.98
PF00075	RNase_H	0.98
PF03837	RecT	0.98
PF09811	Yae1_N	0.98
PF03592	Terminase_2	0.98
PF04002	RadC	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	12.75
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	12.75
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	5.88
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	1.96
COG1481	DNA-binding transcriptional regulator WhiA, involved in cell division	Transcription [K]	0.98
COG1591	Holliday junction resolvase Hjc, archaeal type	Replication, recombination and repair [L]	0.98
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.98
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	0.98
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
All Organisms	root	All Organisms	36.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Viruses	superkingdom	All Organisms → Viruses	23.53 %
cellular organisms	root	All Organisms → cellular organisms	12.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.76 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.88 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.98 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.98 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	3.92 %
Candidatus Methanofastidiosa	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.98 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Dehalococcoidales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales	2.94 %
Candidatus Methanofastidiosum	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → Candidatus Methanofastidiosum	0.98 %
Chloroflexi bacterium RBG_13_48_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_48_17	0.98 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.98 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Dehalococcoidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae	2.94 %
unclassified Methanofastidiosum	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → Candidatus Methanofastidiosum → unclassified Methanofastidiosum	0.98 %
unclassified Desulfobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales	0.98 %
Alicyclobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae	0.98 %
Chloroflexi bacterium RBG_13_48_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_48_17	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Dehalococcoides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides	2.94 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.98 %
Alicyclobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus	0.98 %
Candidatus Methanofastidiosum sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → Candidatus Methanofastidiosum → unclassified Methanofastidiosum → Candidatus Methanofastidiosum sp.	0.98 %
Chloroflexi bacterium RBG_13_48_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_48_17	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Dehalococcoides mccartyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	2.94 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.98 %
Alicyclobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus	0.98 %
Candidatus Methanofastidiosum sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → Candidatus Methanofastidiosum → unclassified Methanofastidiosum → Candidatus Methanofastidiosum sp.	0.98 %
Chloroflexi bacterium RBG_13_48_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_48_17	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Dehalococcoides mccartyi CG1	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi → Dehalococcoides mccartyi CG1	0.98 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.98 %
Alicyclobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus	0.98 %
Candidatus Methanofastidiosum sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → Candidatus Methanofastidiosum → unclassified Methanofastidiosum → Candidatus Methanofastidiosum sp.	0.98 %
Chloroflexi bacterium RBG_13_48_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_48_17	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001335\|ML8_10004929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	17319	Open in IMG/M
3300003690\|PicViral_1001075	Not Available	10496	Open in IMG/M
3300005253\|Ga0073583_1035327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus	11423	Open in IMG/M
3300005253\|Ga0073583_1045087	Not Available	534	Open in IMG/M
3300005253\|Ga0073583_1078538	Not Available	789	Open in IMG/M
3300005253\|Ga0073583_1138059	Not Available	1171	Open in IMG/M
3300005253\|Ga0073583_1246145	All Organisms → Viruses → Predicted Viral	3849	Open in IMG/M
3300005782\|Ga0079367_1100196	Not Available	1177	Open in IMG/M
3300008255\|Ga0100403_1082716	All Organisms → Viruses → Predicted Viral	1285	Open in IMG/M
3300008255\|Ga0100403_1135612	Not Available	919	Open in IMG/M
3300008517\|Ga0111034_1170431	Not Available	3171	Open in IMG/M
3300008517\|Ga0111034_1283996	Not Available	1653	Open in IMG/M
3300009285\|Ga0103680_10000747	Not Available	35083	Open in IMG/M
3300009285\|Ga0103680_10014353	Not Available	5532	Open in IMG/M
3300009285\|Ga0103680_10106505	Not Available	1542	Open in IMG/M
3300009285\|Ga0103680_10121561	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300009414\|Ga0114909_1151579	Not Available	613	Open in IMG/M
3300009488\|Ga0114925_10349814	Not Available	1012	Open in IMG/M
3300009488\|Ga0114925_10965292	Not Available	618	Open in IMG/M
3300009488\|Ga0114925_11492335	Not Available	502	Open in IMG/M
3300009529\|Ga0114919_10516518	Not Available	823	Open in IMG/M
3300009529\|Ga0114919_10850600	Not Available	617	Open in IMG/M
3300009604\|Ga0114901_1177383	Not Available	628	Open in IMG/M
3300011118\|Ga0114922_11733493	Not Available	500	Open in IMG/M
3300012964\|Ga0153916_10365448	Not Available	1495	Open in IMG/M
3300012964\|Ga0153916_10716291	All Organisms → Viruses → Predicted Viral	1080	Open in IMG/M
(restricted) 3300013122\|Ga0172374_1023132	All Organisms → Viruses → Predicted Viral	2829	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10045577	All Organisms → Viruses → Predicted Viral	3225	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10776572	Not Available	597	Open in IMG/M
3300014148\|Ga0180010_1006419	Not Available	1050	Open in IMG/M
3300014203\|Ga0172378_11249347	Not Available	524	Open in IMG/M
3300014204\|Ga0172381_10099719	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	2410	Open in IMG/M
3300014204\|Ga0172381_10179230	Not Available	1720	Open in IMG/M
3300014204\|Ga0172381_10226313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	1502	Open in IMG/M
3300014204\|Ga0172381_10262823	All Organisms → Viruses → Predicted Viral	1376	Open in IMG/M
3300014204\|Ga0172381_10417206	All Organisms → Viruses → Predicted Viral	1048	Open in IMG/M
3300014204\|Ga0172381_10499808	Not Available	940	Open in IMG/M
3300014204\|Ga0172381_10804055	Not Available	705	Open in IMG/M
3300014205\|Ga0172380_10012241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	8711	Open in IMG/M
3300014205\|Ga0172380_10093951	All Organisms → Viruses → Predicted Viral	2441	Open in IMG/M
3300014205\|Ga0172380_10150388	All Organisms → Viruses → Predicted Viral	1852	Open in IMG/M
3300014205\|Ga0172380_10376154	All Organisms → Viruses → Predicted Viral	1068	Open in IMG/M
3300014205\|Ga0172380_11077347	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300014205\|Ga0172380_11273141	Not Available	514	Open in IMG/M
3300014205\|Ga0172380_11290765	Not Available	510	Open in IMG/M
3300014613\|Ga0180008_1004156	All Organisms → cellular organisms → Bacteria	7045	Open in IMG/M
3300014613\|Ga0180008_1004507	Not Available	6658	Open in IMG/M
3300014613\|Ga0180008_1007111	Not Available	5013	Open in IMG/M
3300014613\|Ga0180008_1044909	Not Available	1773	Open in IMG/M
3300014613\|Ga0180008_1059851	Not Available	1515	Open in IMG/M
3300014613\|Ga0180008_1060993	All Organisms → Viruses → Predicted Viral	1498	Open in IMG/M
3300014613\|Ga0180008_1065265	Not Available	1444	Open in IMG/M
3300014613\|Ga0180008_1100427	All Organisms → Viruses → Predicted Viral	1133	Open in IMG/M
3300014613\|Ga0180008_1102440	All Organisms → Viruses → Predicted Viral	1120	Open in IMG/M
3300014613\|Ga0180008_1154191	Not Available	890	Open in IMG/M
3300014613\|Ga0180008_1176890	Not Available	823	Open in IMG/M
3300014613\|Ga0180008_1303328	Not Available	605	Open in IMG/M
3300014613\|Ga0180008_1347613	Not Available	561	Open in IMG/M
3300014613\|Ga0180008_1414285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	508	Open in IMG/M
3300014656\|Ga0180007_10015078	Not Available	6490	Open in IMG/M
3300014656\|Ga0180007_10033454	All Organisms → Viruses → Predicted Viral	3879	Open in IMG/M
3300014656\|Ga0180007_10041725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_48_17	3369	Open in IMG/M
3300014656\|Ga0180007_10048197	All Organisms → Viruses → Predicted Viral	3073	Open in IMG/M
3300014656\|Ga0180007_10054841	All Organisms → Viruses → Predicted Viral	2834	Open in IMG/M
3300014656\|Ga0180007_10116833	All Organisms → Viruses → Predicted Viral	1763	Open in IMG/M
3300014656\|Ga0180007_10166186	All Organisms → Viruses → Predicted Viral	1422	Open in IMG/M
3300014656\|Ga0180007_10188945	All Organisms → Viruses → Predicted Viral	1316	Open in IMG/M
3300014656\|Ga0180007_10190616	All Organisms → Viruses → Predicted Viral	1309	Open in IMG/M
3300014656\|Ga0180007_10292603	Not Available	1009	Open in IMG/M
3300014656\|Ga0180007_10309813	Not Available	975	Open in IMG/M
3300014656\|Ga0180007_10346458	Not Available	911	Open in IMG/M
3300014656\|Ga0180007_10429439	Not Available	801	Open in IMG/M
3300014656\|Ga0180007_10553253	Not Available	689	Open in IMG/M
3300014656\|Ga0180007_10633113	Not Available	637	Open in IMG/M
3300014656\|Ga0180007_10687562	Not Available	607	Open in IMG/M
3300014656\|Ga0180007_10819124	Not Available	549	Open in IMG/M
3300014656\|Ga0180007_10823344	Not Available	547	Open in IMG/M
3300014656\|Ga0180007_10857860	Not Available	534	Open in IMG/M
3300015370\|Ga0180009_10031561	Not Available	3793	Open in IMG/M
3300017963\|Ga0180437_10370448	Not Available	1074	Open in IMG/M
3300020171\|Ga0180732_1020771	Not Available	2412	Open in IMG/M
3300020171\|Ga0180732_1024253	Not Available	2183	Open in IMG/M
3300020171\|Ga0180732_1034736	All Organisms → Viruses → Predicted Viral	1739	Open in IMG/M
3300020171\|Ga0180732_1203126	Not Available	591	Open in IMG/M
3300020814\|Ga0214088_1250158	Not Available	1312	Open in IMG/M
3300020814\|Ga0214088_1704778	All Organisms → Viruses → Predicted Viral	1605	Open in IMG/M
3300022553\|Ga0212124_10664776	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → Candidatus Methanofastidiosum → unclassified Methanofastidiosum → Candidatus Methanofastidiosum sp.	538	Open in IMG/M
3300025122\|Ga0209434_1134046	Not Available	683	Open in IMG/M
3300025327\|Ga0209751_11339299	Not Available	511	Open in IMG/M
3300027901\|Ga0209427_10651103	Not Available	768	Open in IMG/M
3300028299\|Ga0268276_1006457	Not Available	7308	Open in IMG/M
3300028603\|Ga0265293_10034810	Not Available	5091	Open in IMG/M
3300028603\|Ga0265293_10776876	Not Available	502	Open in IMG/M
3300029288\|Ga0265297_10099597	All Organisms → Viruses → Predicted Viral	2322	Open in IMG/M
3300029288\|Ga0265297_10210726	All Organisms → Viruses → Predicted Viral	1414	Open in IMG/M
3300029288\|Ga0265297_10304108	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300029288\|Ga0265297_10472318	Not Available	825	Open in IMG/M
3300029288\|Ga0265297_10556514	Not Available	739	Open in IMG/M
3300029799\|Ga0311022_12799681	Not Available	2283	Open in IMG/M
3300031227\|Ga0307928_10210013	Not Available	1028	Open in IMG/M
3300031539\|Ga0307380_10790002	Not Available	786	Open in IMG/M
3300031539\|Ga0307380_11186727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi → Dehalococcoides mccartyi CG1	593	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.47%
Engineered	Engineered	23.53%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	73.53%
Solid Waste	Engineered → Solid Waste	20.59%
Terrestrial	Environmental → Terrestrial	2.94%
Bioreactor	Engineered → Bioreactor	2.94%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	50.98%
Landfill	Engineered → Solid Waste → Landfill	20.59%
Marine	Environmental → Aquatic → Marine	19.61%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	2.94%
Soil	Environmental → Terrestrial → Soil	2.94%
Anaerobic	Engineered → Bioreactor → Anaerobic	2.94%

Habitat	Taxonomy	Distribution
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	41.18%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	20.59%
Oceanic	Environmental → Aquatic → Marine → Oceanic	14.71%
Lake	Environmental → Aquatic → Freshwater → Lake	3.92%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	3.92%
Coastal	Environmental → Aquatic → Marine → Coastal	2.94%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	2.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.96%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.96%
Clay	Environmental → Terrestrial → Soil → Clay	1.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.98%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.98%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.98%
Loam	Environmental → Terrestrial → Soil → Loam	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	41.18%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	20.59%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	11.76%
Chlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated	3.92%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	2.94%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	2.94%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.98%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.98%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.98%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	38.24%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	20.59%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	5.88%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	5.88%
Groundwater	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater	3.92%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	2.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.96%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.96%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	1.96%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.96%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	1.96%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.96%
Granular Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge	1.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.98%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.98%
Wetlands Benthic	Environmental → Aquatic → Marine → Wetlands → Unclassified → Wetlands Benthic	0.98%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume	0.98%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.98%
Anaerobic Digester Digestate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001335	Wetlands benthic microbial communities from British Columbia, Canada - ML8	Environmental	Open in IMG/M
3300003690	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assembly	Environmental	Open in IMG/M
3300005253	Marine sediment microbial community near Loki's castle	Environmental	Open in IMG/M
3300005782	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf, PM3	Environmental	Open in IMG/M
3300008255	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-01t	Environmental	Open in IMG/M
3300008517	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 175 cmbsf. Combined Assembly of Gp0128389 and Gp0131431 MM4PM4	Environmental	Open in IMG/M
3300009285	Microbial communities from groundwater in Rifle, Colorado, USA - 2A_0.1um	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013122 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10.3m	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300014148	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PW_MetaG	Environmental	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014205	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaG	Engineered	Open in IMG/M
3300014613	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PW_MetaG	Environmental	Open in IMG/M
3300014656	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PC_MetaG	Environmental	Open in IMG/M
3300015370	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PC_MetaG	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300020171	Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR11_0.1 MetaG	Environmental	Open in IMG/M
3300020814	Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules megahit	Engineered	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300028299	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_45m	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300029288	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 137-91	Engineered	Open in IMG/M
3300029799	Metagenomes from anaerobic digester of solid waste, Toronto, Canda. Combined Assembly of Gp0238878, Gp0238879, Gp0242100, Gp0242119	Engineered	Open in IMG/M
3300031227	Saline water microbial communities from Ace Lake, Antarctica - #232	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ML8_1000492914	3300001335	Wetlands Benthic	MPQMERIVRYRVNVSTTVKGVKTFDCTVDMQGFTMDEVLAESDKLVAELERRYPATTEK*
PicViral_100107513	3300003690	Marine, Hydrothermal Vent Plume	VTLNEESVERSLRHRINISISAKGLRTWDCTTDGTGYTMEEILERSDALVQALELRYPAQV*
Ga0073583_103532717	3300005253	Marine Sediment	MEVTKSLRYRVNVSTSVKGIKTWDCTVDGTGYEMEEVVAESDKLVALLDSRYPAPLDSK*
Ga0073583_10450872	3300005253	Marine Sediment	MEENKSLRYRVNVSTSVKGIKTWDCTVDGLNLPMDEVLAESDKLVKALQERYPAPTE*
Ga0073583_10785381	3300005253	Marine Sediment	MEVTKSLRYRVNVSTSVKGIKTWECTVDGVGYDMDVVLDESDKLVAELEIRYHVLEVK*
Ga0073583_11380592	3300005253	Marine Sediment	MEDERSLRYRVNVSTSVKGIKTWDCTVDGTGYNKERILAESDLMVAELEKRYPFSVEEKK
Ga0073583_124614510	3300005253	Marine Sediment	MEVNKSLRYRVNVSTSVKGVKTWECTVDGEGYDMGYVLSESDALVAVLERRYPAPLEGK*
Ga0079367_11001963	3300005782	Marine Sediment	MSEEKSIRYRVNVTISTKGVKTWDCTVDGTNYTQEEVLIESDKLVAQLEQRYPVTEV*
Ga0100403_10827163	3300008255	Aquifer	METKMRYRVNISTSVKGVKTWDCTVDGEGWTQEHILEESDKLVKALEMRYPMKEEGR*
Ga0100403_11356122	3300008255	Aquifer	MEIEKSLRYRINISTSVKGVKTFDCTVDGLGFSMEEVLAESDKLVTELQKRYPIEVEAK*
Ga0111034_11704317	3300008517	Marine Sediment	MERSLRYRVNVSISVKGIKTWDCTVDGTEYSKEEILTESDLLVAELEKRYPTSIEEKK*
Ga0111034_12839964	3300008517	Marine Sediment	MEEERSLRYRVNVSTSVKGVRTWDCTVDGTGFSKGRILAESDLLVGELEKRYPFIVEEKK
Ga0103680_1000074745	3300009285	Groundwater	VQVSTSVKGIKTWECTVDGEGFDQKEILARSDSLVEALERRYPIPVIERAEVRREHDG*
Ga0103680_100143536	3300009285	Groundwater	VEQSLRYRVNISTSVKGVKTWEATVDGSGFTEAEILAFSDSLVAQLERRYPPAVDGSKP*
Ga0103680_101065051	3300009285	Groundwater	MEVTKSLRYRVNVSTKVKGVKTWDCTVDGEGLEMEQILTLSDTLVGQLEKRYPIIAETK*
Ga0103680_101215612	3300009285	Groundwater	MEITKSLRYRVNVSTSVKGVKTWDCTVDGEGLEMEQVLTLSDSLVLQLEKRYPIIAETK*
Ga0114909_11515792	3300009414	Deep Ocean	LIAKGSVMEERALRRRVNVATSVKGVKTWDCTVDGTGYTEEEILEFSDNLVSRLEERYPAPTE*
Ga0114925_103498141	3300009488	Deep Subsurface	MMAEKSLRYRVNIATSTKGVKTWECTVDGEGYEMDEVLAKSDELVKKLETRYPAPLQE*
Ga0114925_109652922	3300009488	Deep Subsurface	MMAEKSLRYRVNISTSVKGIKTWECTVDGEGYEMDEILTKSDELVKKLEERYPAPLQE*
Ga0114925_114923352	3300009488	Deep Subsurface	RVTLEETKSLRYRVNVSISVKAVTTWDCTVDGTGFSQEEILAESDKLVAELEKRYPIKVE
Ga0114919_105165182	3300009529	Deep Subsurface	MIEQSLRYRVNVSVSVKGVKTWDCTVDGLGYEMDEVLNKSAELVGKLELKYPLDIQEK*
Ga0114919_108506002	3300009529	Deep Subsurface	MSEKSLRYRVNVSTSVKGVKTWECTVDGEGYEMDEVLAKSDELVAKLEERYPIQIEKAS*
Ga0114901_11773831	3300009604	Deep Ocean	MSEERRLRYRVNVSISVKGIKTWDCTVDGEGFSMEEILTESDKLVIELGDRYPIQGGD*
Ga0114922_117334931	3300011118	Deep Subsurface	MVEKSLRYRVNVSTSVKGVKTWECTVDGEGYEMDEVLAKSDELVAKLEQRYPIQVEK*
Ga0153916_103654482	3300012964	Freshwater Wetlands	MAEQTRSLRYRVNVSTSVKGVKTWDCTVDGEGYDMDEVLAKSDQLVKKLEDRYPIQITP*
Ga0153916_107162914	3300012964	Freshwater Wetlands	MIEKSIRYRVNVSISTKGQKTWDCTCDAVGMTMGEALTHSDKLVAELEKRYPA
(restricted) Ga0172374_10231322	3300013122	Freshwater	MVEVNKSIRYRVNVSTSVKGVKTWDATVDGDNFTMDEVLGESDKLVKELERRYPPQIDVK
(restricted) Ga0172363_100455776	3300013130	Sediment	MAEIEKSIRYRVNVSISVKGVKTWDCTVDGLNMSKEEVLTESDLLVKALESRYPIKTEG*
(restricted) Ga0172363_107765721	3300013130	Sediment	MEELMDKSLRYRVNVSISVKGVKTWECTVDGDNLFMEEILAESDKLVKELEKRYPISEVLKNV*
Ga0180010_10064191	3300014148	Groundwater	ERRVVMDKSLRYRVNVSTSVKGIKTWDCTVDGEGYTMEEVLERSDILVNELEIRYPVKTE
Ga0172378_112493472	3300014203	Groundwater	MENSLRYRVNVETSVKGVKTFSCTVDGEGYTMEKILSESDKLVKELEKRYNISEVIK*
Ga0172381_100997191	3300014204	Landfill Leachate	MENSLRYRVNVETSVRGVKTFSCTVDGEGYTMEKILSESDKLVKELEKRYNISEVIK*
Ga0172381_101792305	3300014204	Landfill Leachate	MENEIRKEMRHRVNISTSVKGIKTWDCTVEGTGYTQDEVLAESDKLVARLEQRYPITMEGK*
Ga0172381_102263133	3300014204	Landfill Leachate	MEKSLRYRVNVSTSVKGVKTWDCTVDGDNMEMEEVLKRSDELVAELERRYPPQIEGK*
Ga0172381_102628234	3300014204	Landfill Leachate	MDKSLRYRVNVSISVKGQKTWDCTCDGENLSMEEVLAESDKLVAELEKRYPASIDTK*
Ga0172381_104172063	3300014204	Landfill Leachate	MEVEKSMRYRVNISTSVKGVKTFDCTVDGLGYSMEEVLTASDQLVNALEARYPIMEVLK*
Ga0172381_104998082	3300014204	Landfill Leachate	METSLRFRVNVSTSVKGVKTWDCTVDGENIPMDSILEMSDELVKKLENKYPISEVLK*
Ga0172381_108040552	3300014204	Landfill Leachate	MGEVQKSLRYRVNVSTSVKGVKTWDCTTDGEGYEMDEVLAKSDELVKKLEERYPAQIGT*
Ga0172380_100122419	3300014205	Landfill Leachate	MEVQKSVRYRVNISTSVKGVKTFDCTVEGENFTMGEVLAESDLLVKELEKRYPVSEVLK*
Ga0172380_100939513	3300014205	Landfill Leachate	MEVQTSLRYRVNVSTSVKGIKTFDCTVEGDGYEMSTVLELSDLLVKELEKRYPISEVLK*
Ga0172380_101503885	3300014205	Landfill Leachate	MEVEKSMRYRVNISTSVKGVKTWDCTVDGEGFSMSDILDASDKLVKSLEVRYPITEVLK*
Ga0172380_103761542	3300014205	Landfill Leachate	MDKSLRYRVNVSTSVKGIKTWDCTVDGDNMEMEEVLKRSDELVAELEKRYPLVLESK*
Ga0172380_110773471	3300014205	Landfill Leachate	MENEIKKEMRHRVNISTSVKGVKTWDCTVEGTGYTQDEVLAESDKLVDQLEQRYPITMEGK*
Ga0172380_112731412	3300014205	Landfill Leachate	MEKSLRYRVNVSISVKGQKTWDCTCDGENLSMEEILAESDKLVAELERRYPANIEVK*
Ga0172380_112907651	3300014205	Landfill Leachate	MEVQKSIRYRVNVSTSVKGIKTWDCTTEIENGTMDEVLMESDLLVQALEHRYPNTEVLK*
Ga0180008_100415612	3300014613	Groundwater	MEVEKSLRYRVNISTSVKGVKTWDCTVDGVGWTQEVILAESDSLVAQLEMRYPNTEVLK*
Ga0180008_100450710	3300014613	Groundwater	MMEEKSLRYRVNVSTSVKGVKTWDCTVDGENFEMDEVLGRSDELVKKLEARYPAPEA*
Ga0180008_10071117	3300014613	Groundwater	MEIQKSIRYRVNVSTSIKGVKTFDCTVDMENYPMDEVLAESDKLVKELEKRYPITEVMK*
Ga0180008_10449093	3300014613	Groundwater	MEVTKSMRYRVNVAISTKGQKTWDCTVDSTEYTMSDVLTASDALVKELEQRYPAPKEG*
Ga0180008_10598513	3300014613	Groundwater	MDKSMRYRVNVSTSVKGVKTWDCTVDGEGYAQSDILAASDMLVKELEKRYPISEVLKNG*
Ga0180008_10609933	3300014613	Groundwater	MEITKNLRYRVNVKILAKGNKTWDCTVDGENYTMEKVLIESDKLVKELEKRYPFSE*
Ga0180008_10652653	3300014613	Groundwater	MEVEKSMRYRVNISTSVKGVKTFDCTVDGQGFPMDVILAESDELVRELEKRYPITEVLK*
Ga0180008_11004272	3300014613	Groundwater	MEKSLRYRVNVSISVKGIKTWDCTVDGTEYTQEEVLAKSDVLVAQLEKRYPIVDEK*
Ga0180008_11024401	3300014613	Groundwater	METEKSIRFRVNVSISTKGQKTWDCTCDGVGYEMAEILTASDSLVAELSKRYPANIDGGK
Ga0180008_11541912	3300014613	Groundwater	MEEERSLRYRVNVSTSVKGVKTWDCTTEGTNYTQEEVLDKSDNLVKELEKRYPIKVE*
Ga0180008_11768902	3300014613	Groundwater	MAELETSIRYRVNVSTSVKGIKTFDCTVDMLNGSMEDVLRESDMLVTELEERYPPQIEEKK*
Ga0180008_13033282	3300014613	Groundwater	MNHDLPIAPPKAEIHKSIRYRVNVSTSVKGVKTWDCTVDGEGYSQDKILAESDKLVKELEKRYTINEVIK*
Ga0180008_13476131	3300014613	Groundwater	MEKSMRYRVNISTSVKGVKTWDCTVDGELSMEEILIESDKLVKELEKRYPISEVLK*
Ga0180008_14142852	3300014613	Groundwater	MEVEKSLRYRVNVSTSVKGVKTWDCTVDGQNWLMDDVLFASDELVKELEKRYPITEVIIK
Ga0180007_100150787	3300014656	Groundwater	MEENKSLRYRVNVSTSVKGVKTWDCTVDGTNYEQDEVLAKSDVLVAELEKRYPAPKD*
Ga0180007_100334546	3300014656	Groundwater	MAEVEKTLRYRLNVSTSVKGVKTWDCTVESNYMSMDEVLLESDALVASLESRYPAPEEK*
Ga0180007_100417254	3300014656	Groundwater	MKQSLRYRVNVSTSVKGVKTWDCTVDGEGYEMDEILDRSDELVGKLEQRYPIQVDAK*
Ga0180007_100481975	3300014656	Groundwater	MEEKSLRYRINISTSVKGVKTWECTCDGVGWTDDEILEKSDELVKKLETRYPGPEV*
Ga0180007_100548414	3300014656	Groundwater	MPEVTKSLRYRVNVSTSVKGIKTYECTVDGEGFTMEEVLAESDKLVAELSRRYPPQLGEK
Ga0180007_101168332	3300014656	Groundwater	MTEANKSLRYRVNVSISVKGVKTWDCTVDGENYEMDEVLAKSDELVKKLETRYPASEGQTQI*
Ga0180007_101661866	3300014656	Groundwater	MEVEKSLRYRVNVSTSVKGIKTYDCTVDGTGFEMDEVLKLSDELVAKLDQRYPPQLEVK*
Ga0180007_101889452	3300014656	Groundwater	MMEHEVVVEKSIRYRVNVSISTKGQKTWDCTCDAQGYTKEEVLAESNALVAELEKKYPIQVEAGK*
Ga0180007_101906163	3300014656	Groundwater	MSEIEKSIRYRVNVSTSVKGIKTFDCTVDMLNATMEETLIESDKLVAELSNRYPPQIEEKK*
Ga0180007_102926032	3300014656	Groundwater	MDKSMRYRVNVSTSVKGVKTWDCTVDGEGYAQSDILEASDMLVKELEKRYPISEVLKNG*
Ga0180007_103098131	3300014656	Groundwater	MAEIQKSLRYRVNVSISVKGQKTWDCTCDAEGFTMEEVLAESDKLVAELDQRYPAPIEETKKEK*
Ga0180007_103464585	3300014656	Groundwater	VEVEKSMRYRINISTSVKGIKTFDCTVDGLGYSMEEVLTDSDKLVKELESRYPVNVEVTK
Ga0180007_104294392	3300014656	Groundwater	MEVEKSMRYRVNVSISVKGQKTWDCTTDGQGYTQEEILAESDKLVKALEGRYPAQMGG*
Ga0180007_105532531	3300014656	Groundwater	MEITKSIRYRVNISTSVKGIKTWENTVDCTGYSKEEVMAESDALVAECEKRYQALKEGG*
Ga0180007_106331133	3300014656	Groundwater	MEETKSLRYRVNVSTSVKGVKTWDCTVDATGYGMLFVLEESDKLVEQLGKRYPIEEVK*
Ga0180007_106875623	3300014656	Groundwater	VKELRYRVNVNISTKGMKTWECTVDGTGYEMDEVLKKSDLLVKELEARYPMGEIG*
Ga0180007_108191242	3300014656	Groundwater	MTGITKSIRYRVNVSTSVKGIKTWECTVDGEGYTQREVLLESDQLVASLESRYPPVVESK
Ga0180007_108233441	3300014656	Groundwater	MEVEKSIRYRVNVSTSVKGVKTWDCTVDGQDFPMDVILAESDELVKELEKRYPNMEVLK*
Ga0180007_108578601	3300014656	Groundwater	MTEPNKEDSMEVEKSMRYRVNVSTSVKGIKTWDCTCDGLGYSKEDVLAQSDELVKLLEQRYPAPKE*
Ga0180009_1003156112	3300015370	Groundwater	MAENEITKSMRYRINISVSVKGVKTWECTCDGQGYGMTDVLEASDVLVKALEARYPITVEVK*
Ga0180437_103704484	3300017963	Hypersaline Lake Sediment	MSELQKSLRYRVQVSTSVKGIKTFDCTVDGENFTMDEVLAESDKLVAELMKRYPAPLE
Ga0180732_10207713	3300020171	Groundwater	MKIEKSIRYRVNISTSVKGIKTWDCTVDMEGHEMQDALDHSDALVKELEIRYPISEVITK
Ga0180732_10242535	3300020171	Groundwater	MEIQQSMRYRVNISTSVKGVKTWDCTVDGEGYAMADVLCQSDLFVQELEKRYPISEVITK
Ga0180732_10347363	3300020171	Groundwater	MEIEKSIRYRVNISTSVKGVKTWECTVDGENYTKEEVLIFSDQLVAALESKYPISEVVTK
Ga0180732_12031262	3300020171	Groundwater	MAEVTKSLRYRVNVSTSVKGVKTWECTVDGEGYEMEDILIESDKLVLQLERRYPITEVMT
Ga0214088_12501582	3300020814	Granular Sludge	MEDKIQKSHRYRVNVTTSVKGVKTWDCTVEGENWDMADLLLESDRLVKQLEDRYPIKIEE
Ga0214088_17047785	3300020814	Granular Sludge	MANELQKSHRYRVNISTSVKGVKTWDCTVEGENWDMADLLLESDRLVKQLEDRYPIK
Ga0212124_106647762	3300022553	Freshwater	MEAQKSIRYRVNISTSVKGVKTWDCTVDMEGHAMQDVLEHSDALVQELELRYPVTEVVTK
Ga0209434_11340463	3300025122	Marine	MVEHYCADERSLRYRVNVSTSVKGVKTWDCTVDGTGYTKGRILAESDLLVGELEKRYPFQIEEKK
Ga0209751_113392991	3300025327	Soil	MSTENRSLRYRVNISTSVKGVKTWDCTVDGEGFSMGEVLQFSDGLVAELEKRYP
Ga0209427_106511032	3300027901	Marine Sediment	MEVQKSLRYRVNVSTSVKGIKTFDCTVDGENYEMDEVLEKSDELVKKLEQRYPPVKE
Ga0268276_100645716	3300028299	Saline Water	MAEIEKSIRYRVNVSTSVKGVKTFDCTVDMLNAPMEEVLAESDKLVAELSTRYPPSIEEK
Ga0265293_100348102	3300028603	Landfill Leachate	METSLRFRVNVSTSVKGVKTWDCTVDGENIPMDSILEMSDELVKKLENKYPISEVLK
Ga0265293_107768761	3300028603	Landfill Leachate	MENSLRYRVNVETSVKGVKTFSCTVDGEGYTMEKILSESDKLVKELEKRYNI
Ga0265297_100995973	3300029288	Landfill Leachate	MEVNKSLRYRVNVSTSVKGVKTWDCTVDGEGYGMYQVLQESDSLVRELEKRYPIQLEVREVR
Ga0265297_102107262	3300029288	Landfill Leachate	MEVEKSLRYRVNISTSVKGVKTWDCTVDGEGFSMSDILDASDKLVKSLEVRYPITEVLK
Ga0265297_103041081	3300029288	Landfill Leachate	MEVEKSMRYRVNISTSVKGVKTFDCTVDGLGYSMEEVLQASDQLVNALEVRYPITEVLK
Ga0265297_104723182	3300029288	Landfill Leachate	MEVTKSIRYRVNVSTSVKGIKTWDATVDGDNYTMEEVLAESDKFVAELTRRYPPQVEVTK
Ga0265297_105565143	3300029288	Landfill Leachate	MDKSLRYRVNVSISVKGQKTWDCTCDGENLSMEEVLAESDKLVAELEKRYPASIDTK
Ga0311022_127996812	3300029799	Anaerobic Digester Digestate	MANELQKSHRYRVNISTSVKGVKTWDCTVEGENWDMADLLLESDRLVKQLEDRYPIKIEE
Ga0307928_102100133	3300031227	Saline Water	MAEEVKQSRVRVNVSISVKGVKTWDCTVEKENMGEALAESDKLVAELEKRYPVKMEEK
Ga0307380_107900022	3300031539	Soil	MEVEKSMRYRVNISTSVKGVKTFDCTVDGLGYSIEEVLQASDQLVNALEARYPITEVTNAITK
Ga0307380_111867272	3300031539	Soil	MAEEVTQKSTRYRVNVSISVKGIKTWDCTVDSDYLTRDEVLVESDALVKELEKRYPINLEVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters